Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002170

Physical Location & Seq

Genomic Coordinates Reverse (-)

10201104 .. 10205422

Gene Structure 4319 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G23980.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGTTCGATACTTGTGGCCCAAAAGGAGTCAAATCTCAAGTCATCAGTGGCCAACGCGAGAACTTTGTGAGGTTAGATAGTATGGACTCAAGGTACTCGCAAAGTTCCGAAACGGGTCTAAACAAATGCACATTGAATATACAAGGAGGACCTAAACGTTTTGCTCAAGGAAGCAAAGCATCATCTGGATCTTTTAAGAAAGGGTTTAGAAAAGGATCAGAGGGGCTTTGGTCTATAGGTCGATCGATTGGACTCGGTGTTTCGCGCGCTGTGTTTCCAGAAGATCTTGAAGTATCAGAGAAGAAGATATTTGATCCACAAGACAAGTTTCTTTTACTCTGCAACAAGTTGTTCGTCGCTTCGTGTATACTCGCAGTATCCGTTGATCCTCTCTTCTTGTATCTTCCTTTCATTAATGATAAAGCGAAATGTGTTGGTATAGATCGGAAACTGGCTATTATAGTAACTACAATAAGGACAGTTATAGATTCGTTTTATCTCTTTCATATGGCTCTACGGTTTAGAACAGCTTATGTTGCTCCCTCGTCACGGGTTTTTGGCCGCGGAGAGCTTGTTATAGACCCGGCGCAGATAGCTAAGCGGTATCTGCAACAGTATTTCATCATTGATTTACTTTCTGTTCTTCCGGTTCCACAGATTATAGTTTGGAGATTCCTCTATACTTCGAGGGGTGCGAATGTACTGGCGACAAAACAAGCACTTAGATATATCGTTTTAGTTCAGTATATTCCGCGGTTTCTTCGAATGTATCCTTTAAGTTCAGAACTGAAGAGAACTGCCGGGGTATTCGCTGAAACTGCGTGGGCGGGTGCAGCGTACTACTTGTTGCTTTACATGCTCGCAAGTCATATTGTTGGGGCTTTGTGGTATTTGCTTGCTTTAGAACGCAATAACGACTGTTGGAGTAAGGCTTGCCACAATAACCAGAACTGTACTAGAAACTTCTTGTTTTGTGGTAACCAAAATATGAAAGGTTATGCTGCTTGGGACAATATTAAAGTTTCGTATCTTCAACTAAAGTGCCCTGTCAATGTCCCCGAAGATGAAGAACCTCCTTTTGATTTTGGAATCTACTTAAGAGCACTCTCCTCTGGCATCGTCTCGTCTAAGAACTTTGTCTCTAAGTACTTCTTCTGTTTGTGGTGGGGACTACAGAATCTTAGTACACTTGGTCAAGGGCTTGAAACCAGCACATATCCTGGAGAGGTTATATTCTCTATAACACTTGCTATTGCTGGACTTCTACTATTTGCACTTCTCATTGGAAACATGCAGACTTATCTTCAATCGCTTACCATTCGGTTAGAAGAAATGCGAGTAAAAAGACGTGACTCAGAACAGTGGATGCATCATCGAATGCTTCCACCAGAACTGCGGGAACGGGTTAGACGATATGACCAGTACAAGTGGTTGGAGACGCGTGGAGTTGATGAAGAGAATCTTGTTCAGAATCTCCCAAAGGATCTTAGAAGAGATATCAAACGTCATCTCTGTCTCGCGTTAGTCCGAAGAGTTCCATTGTTTGAGAATATGGATGAGAGGCTGTTAGATGCAATCTGTGAGAGGCTTAAGCCATGTCTGTTCACTGAGAAGTCGTACTTGGTTCGTGAGGGAGATCCAGTCAACGAGATGCTCTTCATTATCCGTGGTAGGCTCGAAAGTGTAACCACTGATGGCGGTAGAAGCGGATTCTACAACCGGAGTTTACTTAAAGAAGGAGATTTCTGCGGTGACGAGCTTTTGACATGGGCGCTTGATCCCAAATCCGGTTCTAACCTCCCTTCCTCTACAAGAACCGTGAAGGCCTTAACCGAAGTGGAAGCTTTCGCTCTGATAGCCGATGAGCTGAAATTCGTGGCAAGCCAGTTCAGGAGACTCCATAGCAGACAAGTACAACACACGTTCAGATTCTATTCACAGCAATGGAGGACTTGGGCCGCTTGCTTCATGCAAGCAGCATGGCGACGGTACATAAAGAGGAAGAAATTGGAGCAACTTAGAAAAGAAGAGGAAGAAGAAGAAGCGGCAGCAGCATCAGTTATAGCAGGAGGAAGTCCTTATAGCATAAGAGCAACGTTCTTGGCTTCAAAGTTTGCGGCAAATGCACTTCGTAGCGTTCACAAGAACCGGACCGCGAAATCAACATTGTTGTTGTCATCTACTAAAGAATTGGTGAAATTTCAGAAACCTCCAGAACCAGATTTCTCTGCTGAAGATCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005217 GO:0005221 GO:0005223 GO:0005244 GO:0005249 GO:0005261 GO:0005262 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006816 GO:0008150 GO:0008324 GO:0009987 GO:0010035 GO:0010038 GO:0015075 GO:0015077 GO:0015079 GO:0015085 GO:0015267 GO:0015276 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042221 GO:0042391 GO:0043855 GO:0044425 GO:0044459 GO:0044464 GO:0046686 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071804 GO:0071805 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0099094

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

747

Amino Acids

85.44

Weight (kDa)

9.38

Isoelectric Point (pI)

50.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	119 - 463	8.1e-17	Ion transport protein
cNMP_binding	PF00027	558 - 647	5.5e-06	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002170)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23980 AT2G23980 AT2G23980 AT2G23980 AT2G23980 AT2G23980 AT2G23980 AT2G23980 AT2G23980 AT2G23980 AT4G30560 AT4G30560 AT4G30560 AT4G30560 AT4G30560 AT5G57940 AT5G57940 AT5G57940
fragaria_vesca	FvH4_1g00870 FvH4_1g00870 FvH4_1g00870 FvH4_1g00870
malus_domestica	MD02G1007200.v1.1 MD15G1144500.v1.1
prunus_persica	Prupe.7G263200_v2.0.a1 Prupe.7G263200_v2.0.a1 Prupe.7G263200_v2.0.a1 Prupe.7G263200_v2.0.a1
pyrus_communis	pycom02g00610 pycom02g00620 pycom15g13600 pycom15g13610
rosa_chinensis	RchiOBHm_Chr2g0085581
rosa_laevigata	RLG00000015703
rosa_multiflora	Rmu_co8217668.1_g000001 Rmu_ssc0000347.1_g000007
rosa_roxburghii	Rroxscaffold_2G00155250
rosa_rugosa	Rorug01G0461400
rosa_samantha	Rh2AG010500 Rh2BG011100 Rh2CG012000 Rh2DG013000
rosa_wichuraiana	Rw2G000940

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	367
AccII	CGCG	8 cut(s)	57, 265, 267, 564, 754, 1441, 1520, 2156
AclI	AACGTT	2 cut(s)	157, 2096
AclWI	GGATC	7 cut(s)	196, 223, 308, 380, 1491, 1631, 1772
AcoI	YGGCCR	2 cut(s)	49, 559
AcsI	RAATTY	2 cut(s)	1871, 2198
AcuI	CTGAAG	1 cut(s)	809
AfiI	CCNNNNNNNGG	2 cut(s)	549, 1787
AflII	CTTAAG	2 cut(s)	1096, 1589
AflIII	ACRYGT	2 cut(s)	1439, 1920
AgsI	TTSAA	6 cut(s)	136, 290, 1034, 1205, 1307, 2109
AjiI	CACGTC	1 cut(s)	1349
AjnI	CCWGG	1 cut(s)	1219
AjuI	GAANNNNNNNTTGG	2 cut(s)	1604, 1636
AluBI	AGCT	6 cut(s)	530, 571, 596, 1759, 1844, 1867
AluI	AGCT	6 cut(s)	530, 571, 596, 1759, 1844, 1867
Alw21I	GWGCWC	1 cut(s)	1105
Alw26I	GTCTC	5 cut(s)	1126, 1144, 1430, 1520, 1888
AlwI	GGATC	7 cut(s)	196, 223, 308, 380, 1491, 1631, 1772
AoxI	GGCC	5 cut(s)	16, 49, 559, 1824, 1956
ApeKI	GCWGC	5 cut(s)	833, 1001, 1976, 2048, 2051
ApoI	RAATTY	2 cut(s)	1871, 2198
ArsI	GACNNNNNNTTYG	2 cut(s)	24, 56
AseI	ATTAAT	1 cut(s)	414
AspLEI	GCGC	4 cut(s)	267, 269, 589, 1774
AspS9I	GGNCC	4 cut(s)	17, 149, 1956, 2151
AsuC2I	CCSGG	2 cut(s)	584, 802
AsuHPI	GGTGA	2 cut(s)	1763, 2206
AsuII	TTCGAA	1 cut(s)	763
AvaII	GGWCC	2 cut(s)	149, 2151
BaeGI	GKGCMC	1 cut(s)	1046
BalI	TGGCCA	1 cut(s)	51
Bbv12I	GWGCWC	1 cut(s)	1105
BbvI	GCAGC	5 cut(s)	845, 988, 1988, 2060, 2063
BccI	CCATC	1 cut(s)	1688
BciT130I	CCWGG	1 cut(s)	1221
BciVI	GTATCC	2 cut(s)	388, 780
BcnI	CCSGG	2 cut(s)	584, 802
BcoDI	GTCTC	5 cut(s)	1126, 1144, 1430, 1520, 1888
BfaI	CTAG	1 cut(s)	957
BfmI	CTRYAG	2 cut(s)	234, 1172
BfoI	RGCGCY	1 cut(s)	1775
BfrI	CTTAAG	2 cut(s)	1096, 1589
BfuI	GTATCC	2 cut(s)	388, 780
BglII	AGATCT	1 cut(s)	283
BisI	GCNGC	9 cut(s)	562, 834, 1002, 1959, 1977, 2046, 2049, 2052, 2118
BlpI	GCTNAGC	1 cut(s)	597
BlsI	GCNGC	9 cut(s)	563, 835, 1003, 1960, 1978, 2047, 2050, 2053, 2119
BmcAI	AGTACT	1 cut(s)	1148
Bme1390I	CCNGG	3 cut(s)	584, 802, 1221
Bme18I	GGWCC	2 cut(s)	149, 2151
BmgBI	CACGTC	1 cut(s)	1349
BmgT120I	GGNCC	4 cut(s)	17, 149, 1956, 2151
BmiI	GGNNCC	1 cut(s)	651
BmrFI	CCNGG	3 cut(s)	584, 802, 1221
BmsI	GCATC	7 cut(s)	188, 1125, 1356, 1378, 1561, 1641, 2063
BpmI	CTGGAG	2 cut(s)	1242, 2196
Bpu1102I	GCTNAGC	1 cut(s)	597
Bpu14I	TTCGAA	1 cut(s)	763
BpuEI	CTTGAG	3 cut(s)	21, 73, 150
BpuMI	CCSGG	2 cut(s)	584, 802
Bsa29I	ATCGAT	1 cut(s)	245
BsaJI	CCNNGG	4 cut(s)	562, 752, 801, 1666
BsaWI	WCCGGW	4 cut(s)	646, 1719, 1787, 2148
BsaXI	ACNNNNNCTCC	4 cut(s)	558, 588, 1626, 1656
Bsc4I	CCNNNNNNNGG	2 cut(s)	549, 1787
Bse1I	ACTGG	5 cut(s)	456, 708, 1420, 1640, 1885
Bse3DI	GCAATG	1 cut(s)	1949
BseBI	CCWGG	1 cut(s)	1221
BseCI	ATCGAT	1 cut(s)	245
BseDI	CCNNGG	4 cut(s)	562, 752, 801, 1666
BseGI	GGATG	2 cut(s)	1371, 1561
BseLI	CCNNNNNNNGG	2 cut(s)	549, 1787
BseMI	GCAATG	1 cut(s)	1949
BseMII	CTCAG	2 cut(s)	1368, 1599
BseNI	ACTGG	5 cut(s)	456, 708, 1420, 1640, 1885
BsePI	GCGCGC	1 cut(s)	265
BseRI	GAGGAG	1 cut(s)	1099
BseSI	GKGCMC	1 cut(s)	1046
BseXI	GCAGC	5 cut(s)	845, 988, 1988, 2060, 2063
BsgI	GTGCAG	1 cut(s)	852
Bsh1236I	CGCG	8 cut(s)	57, 265, 267, 564, 754, 1441, 1520, 2156
Bsh1285I	CGRYCG	1 cut(s)	245
BshFI	GGCC	5 cut(s)	18, 51, 561, 1826, 1958
BshVI	ATCGAT	1 cut(s)	245
BsiEI	CGRYCG	1 cut(s)	245
BsiHKAI	GWGCWC	1 cut(s)	1105
BsiSI	CCGG	6 cut(s)	584, 647, 801, 1720, 1788, 2149
BslFI	GGGAC	3 cut(s)	1022, 1040, 1182
BslI	CCNNNNNNNGG	2 cut(s)	549, 1787
BsmAI	GTCTC	5 cut(s)	1126, 1144, 1430, 1520, 1888
BsmBI	CGTCTC	2 cut(s)	1126, 1430
BsmFI	GGGAC	3 cut(s)	1022, 1040, 1182
BsmI	GAATGC	1 cut(s)	1383
BsnI	GGCC	5 cut(s)	18, 51, 561, 1826, 1958
Bsp119I	TTCGAA	1 cut(s)	763
Bsp1286I	GDGCHC	2 cut(s)	1046, 1105
Bsp1720I	GCTNAGC	1 cut(s)	597
BspANI	GGCC	5 cut(s)	18, 51, 561, 1826, 1958
BspCNI	CTCAG	2 cut(s)	1367, 1600
BspDI	ATCGAT	1 cut(s)	245
BspFNI	CGCG	8 cut(s)	57, 265, 267, 564, 754, 1441, 1520, 2156
BspLI	GGNNCC	1 cut(s)	651
BspPI	GGATC	7 cut(s)	196, 223, 308, 380, 1491, 1631, 1772
BspQI	GCTCTTC	1 cut(s)	1661
BspT104I	TTCGAA	1 cut(s)	763
BspTI	CTTAAG	2 cut(s)	1096, 1589
BsrDI	GCAATG	1 cut(s)	1949
BsrI	ACTGG	5 cut(s)	456, 708, 1420, 1640, 1885
BssECI	CCNNGG	4 cut(s)	562, 752, 801, 1666
BssHII	GCGCGC	1 cut(s)	265
BssNAI	GTATAC	1 cut(s)	368
Bst1107I	GTATAC	1 cut(s)	368
Bst2UI	CCWGG	1 cut(s)	1221
Bst4CI	ACNGT	8 cut(s)	481, 519, 615, 920, 953, 1362, 1819, 1989
Bst6I	CTCTTC	7 cut(s)	398, 785, 1449, 1486, 1525, 1661, 2022
BstAFI	CTTAAG	2 cut(s)	1096, 1589
BstBI	TTCGAA	1 cut(s)	763
BstC8I	GCNNGC	7 cut(s)	267, 861, 897, 934, 1882, 1963, 1974
BstDEI	CTNAG	9 cut(s)	597, 722, 1128, 1143, 1181, 1354, 1487, 1608, 2018
BstDSI	CCRYGG	3 cut(s)	562, 752, 1666
BstEII	GGTNACC	1 cut(s)	977
BstF5I	GGATG	2 cut(s)	1371, 1561
BstFNI	CGCG	8 cut(s)	57, 265, 267, 564, 754, 1441, 1520, 2156
BstH2I	RGCGCY	1 cut(s)	1775
BstHHI	GCGC	4 cut(s)	267, 269, 589, 1774
BstMAI	GTCTC	5 cut(s)	1126, 1144, 1430, 1520, 1888
BstMCI	CGRYCG	1 cut(s)	245
BstNI	CCWGG	1 cut(s)	1221
BstNSI	RCATGY	2 cut(s)	859, 1294
BstPI	GGTNACC	1 cut(s)	977
BstSCI	CCNGG	3 cut(s)	582, 800, 1219
BstSFI	CTRYAG	2 cut(s)	234, 1172
BstSLI	GKGCMC	1 cut(s)	1046
BstUI	CGCG	8 cut(s)	57, 265, 267, 564, 754, 1441, 1520, 2156
BstV1I	GCAGC	5 cut(s)	845, 988, 1988, 2060, 2063
BstX2I	RGATCY	4 cut(s)	188, 283, 1483, 1636
BstYI	RGATCY	4 cut(s)	188, 283, 1483, 1636
BstZ17I	GTATAC	1 cut(s)	368
Bsu15I	ATCGAT	1 cut(s)	245
BsuI	GTATCC	2 cut(s)	388, 780
BsuRI	GGCC	5 cut(s)	18, 51, 561, 1826, 1958
BsuTUI	ATCGAT	1 cut(s)	245
BtgI	CCRYGG	3 cut(s)	562, 752, 1666
BtrI	CACGTC	1 cut(s)	1349
BtsCI	GGATG	2 cut(s)	1371, 1561
BtsIMutI	CAGTG	5 cut(s)	52, 1367, 1605, 1689, 2239
Cac8I	GCNNGC	7 cut(s)	267, 861, 897, 934, 1882, 1963, 1974
CfoI	GCGC	4 cut(s)	267, 269, 589, 1774
Cfr13I	GGNCC	4 cut(s)	17, 149, 1956, 2151
Cfr42I	CCGCGG	2 cut(s)	565, 755
ClaI	ATCGAT	1 cut(s)	245
CpoI	CGGWCCG	1 cut(s)	2151
CseI	GACGC	1 cut(s)	1447
CspI	CGGWCCG	1 cut(s)	2151
CviAII	CATG	6 cut(s)	856, 1291, 1596, 1767, 1969, 1980
DdeI	CTNAG	9 cut(s)	597, 722, 1128, 1143, 1181, 1354, 1487, 1608, 2018
EaeI	YGGCCR	2 cut(s)	49, 559
Eam1104I	CTCTTC	7 cut(s)	398, 785, 1449, 1486, 1525, 1661, 2022
EarI	CTCTTC	7 cut(s)	398, 785, 1449, 1486, 1525, 1661, 2022
Eco147I	AGGCCT	1 cut(s)	1826
Eco32I	GATATC	1 cut(s)	1498
Eco47I	GGWCC	2 cut(s)	149, 2151
Eco57I	CTGAAG	1 cut(s)	809
Eco91I	GGTNACC	1 cut(s)	977
EcoO109I	RGGNCCY	1 cut(s)	149
EcoO65I	GGTNACC	1 cut(s)	977
EcoRII	CCWGG	1 cut(s)	1219
EcoRV	GATATC	1 cut(s)	1498
EcoT22I	ATGCAT	1 cut(s)	1371
Esp3I	CGTCTC	2 cut(s)	1126, 1430
FaeI	CATG	6 cut(s)	859, 1294, 1599, 1770, 1972, 1983
FalI	AAGNNNNNCTT	6 cut(s)	1136, 1168, 1446, 1478, 1604, 1636
FaqI	GGGAC	3 cut(s)	1022, 1040, 1182
FatI	CATG	6 cut(s)	855, 1290, 1595, 1766, 1968, 1979
FauI	CCCGC	2 cut(s)	820, 1389
FauNDI	CATATG	1 cut(s)	507
FblI	GTMKAC	1 cut(s)	367
Fnu4HI	GCNGC	9 cut(s)	562, 834, 1002, 1959, 1977, 2046, 2049, 2052, 2118
FokI	GGATG	2 cut(s)	1378, 1568
Fsp4HI	GCNGC	9 cut(s)	562, 834, 1002, 1959, 1977, 2046, 2049, 2052, 2118
FspBI	CTAG	1 cut(s)	957
GlaI	GCGC	4 cut(s)	266, 268, 588, 1773
GluI	GCNGC	9 cut(s)	562, 834, 1002, 1959, 1977, 2046, 2049, 2052, 2118
GsuI	CTGGAG	2 cut(s)	1242, 2196
HaeII	RGCGCY	1 cut(s)	1775
HaeIII	GGCC	5 cut(s)	18, 51, 561, 1826, 1958
HapII	CCGG	6 cut(s)	584, 647, 801, 1720, 1788, 2149
HgaI	GACGC	1 cut(s)	1447
HhaI	GCGC	4 cut(s)	267, 269, 589, 1774
Hin1II	CATG	6 cut(s)	859, 1294, 1599, 1770, 1972, 1983
Hin6I	GCGC	4 cut(s)	265, 267, 587, 1772
HinP1I	GCGC	4 cut(s)	265, 267, 587, 1772
HincII	GTYRAC	1 cut(s)	1645
HindII	GTYRAC	1 cut(s)	1645
HindIII	AAGCTT	1 cut(s)	1842
HpaII	CCGG	6 cut(s)	584, 647, 801, 1720, 1788, 2149
HphI	GGTGA	2 cut(s)	1763, 2206
Hpy166II	GTNNAC	6 cut(s)	368, 1187, 1605, 1645, 1727, 2140
Hpy188III	TCNNGA	6 cut(s)	186, 278, 287, 1628, 1891, 2213
Hpy8I	GTNNAC	6 cut(s)	368, 1187, 1605, 1645, 1727, 2140
Hpy99I	CGWCG	2 cut(s)	359, 1989
HpyAV	CCTTC	3 cut(s)	1730, 1812, 1816
HpyCH4III	ACNGT	8 cut(s)	481, 519, 615, 920, 953, 1362, 1819, 1989
HpyCH4IV	ACGT	5 cut(s)	157, 1348, 1504, 1922, 2096
HpyF3I	CTNAG	9 cut(s)	597, 722, 1128, 1143, 1181, 1354, 1487, 1608, 2018
HpySE526I	ACGT	5 cut(s)	157, 1348, 1504, 1922, 2096
Hsp92II	CATG	6 cut(s)	859, 1294, 1599, 1770, 1972, 1983
HspAI	GCGC	4 cut(s)	265, 267, 587, 1772
KspI	CCGCGG	2 cut(s)	565, 755
LguI	GCTCTTC	1 cut(s)	1661
LmnI	GCTCC	2 cut(s)	544, 2011
Lsp1109I	GCAGC	5 cut(s)	845, 988, 1988, 2060, 2063
LweI	GCATC	7 cut(s)	188, 1125, 1356, 1378, 1561, 1641, 2063
MaeI	CTAG	1 cut(s)	957
MaeII	ACGT	5 cut(s)	157, 1348, 1504, 1922, 2096
MaeIII	GTNAC	6 cut(s)	463, 546, 977, 1349, 1684, 1751
MflI	RGATCY	4 cut(s)	188, 283, 1483, 1636
MhlI	GDGCHC	2 cut(s)	1046, 1105
MlsI	TGGCCA	1 cut(s)	51
MluCI	AATT	4 cut(s)	1871, 2006, 2189, 2198
MluI	ACGCGT	1 cut(s)	1439
MluNI	TGGCCA	1 cut(s)	51
MlyI	GAGTC	5 cut(s)	36, 80, 246, 1346, 1890
MmeI	TCCRAC	2 cut(s)	902, 1413
Mox20I	TGGCCA	1 cut(s)	51
Mph1103I	ATGCAT	1 cut(s)	1371
MscI	TGGCCA	1 cut(s)	51
MseI	TTAA	8 cut(s)	195, 414, 776, 1017, 1097, 1590, 1731, 1829
MslI	CAYNNNNRTG	1 cut(s)	1942
Msp20I	TGGCCA	1 cut(s)	51
MspA1I	CMGCKG	2 cut(s)	564, 754
MspCI	CTTAAG	2 cut(s)	1096, 1589
MspI	CCGG	6 cut(s)	584, 647, 801, 1720, 1788, 2149
MspR9I	CCNGG	3 cut(s)	584, 802, 1221
Mva1269I	GAATGC	1 cut(s)	1383
MvaI	CCWGG	1 cut(s)	1221
MvnI	CGCG	8 cut(s)	57, 265, 267, 564, 754, 1441, 1520, 2156
NciI	CCSGG	2 cut(s)	584, 802
NdeI	CATATG	1 cut(s)	507
NlaIII	CATG	6 cut(s)	859, 1294, 1599, 1770, 1972, 1983
NlaIV	GGNNCC	1 cut(s)	651
NmuCI	GTSAC	3 cut(s)	546, 1349, 1751
NsiI	ATGCAT	1 cut(s)	1371
NspI	RCATGY	2 cut(s)	859, 1294
NspV	TTCGAA	1 cut(s)	763
PauI	GCGCGC	1 cut(s)	265
PceI	AGGCCT	1 cut(s)	1826
PciSI	GCTCTTC	1 cut(s)	1661
PcsI	WCGNNNNNNNCGW	3 cut(s)	378, 692, 1408
PctI	GAATGC	1 cut(s)	1383
PfeI	GAWTC	8 cut(s)	488, 672, 1089, 1177, 1459, 1471, 1710, 1929
PfoI	TCCNGGA	1 cut(s)	1219
PkrI	GCNGC	9 cut(s)	563, 835, 1003, 1960, 1978, 2047, 2050, 2053, 2119
Ple19I	CGATCG	1 cut(s)	245
PleI	GAGTC	5 cut(s)	35, 80, 246, 1346, 1890
PpsI	GAGTC	5 cut(s)	35, 80, 246, 1346, 1890
PpuMI	RGGWCCY	1 cut(s)	149
PshBI	ATTAAT	1 cut(s)	414
Psp1406I	AACGTT	2 cut(s)	157, 2096
Psp5II	RGGWCCY	1 cut(s)	149
Psp6I	CCWGG	1 cut(s)	1219
PspEI	GGTNACC	1 cut(s)	977
PspGI	CCWGG	1 cut(s)	1219
PspN4I	GGNNCC	1 cut(s)	651
PspPI	GGNCC	4 cut(s)	17, 149, 1956, 2151
PspPPI	RGGWCCY	1 cut(s)	149
PsuI	RGATCY	4 cut(s)	188, 283, 1483, 1636
PteI	GCGCGC	1 cut(s)	265
PvuI	CGATCG	1 cut(s)	245
RseI	CAYNNNNRTG	1 cut(s)	1942
Rsr2I	CGGWCCG	1 cut(s)	2151
RsrII	CGGWCCG	1 cut(s)	2151
SacII	CCGCGG	2 cut(s)	565, 755
SapI	GCTCTTC	1 cut(s)	1661
SaqAI	TTAA	8 cut(s)	195, 414, 776, 1017, 1097, 1590, 1731, 1829
SatI	GCNGC	9 cut(s)	562, 834, 1002, 1959, 1977, 2046, 2049, 2052, 2118
Sau96I	GGNCC	4 cut(s)	17, 149, 1956, 2151
ScaI	AGTACT	1 cut(s)	1148
SchI	GAGTC	5 cut(s)	36, 80, 246, 1346, 1890
ScrFI	CCNGG	3 cut(s)	584, 802, 1221
SduI	GDGCHC	2 cut(s)	1046, 1105
SfaNI	GCATC	7 cut(s)	188, 1125, 1356, 1378, 1561, 1641, 2063
SfcI	CTRYAG	2 cut(s)	234, 1172
Sfr303I	CCGCGG	2 cut(s)	565, 755
SfuI	TTCGAA	1 cut(s)	763
SgrBI	CCGCGG	2 cut(s)	565, 755
SinI	GGWCC	2 cut(s)	149, 2151
SmiMI	CAYNNNNRTG	1 cut(s)	1942
SmlI	CTYRAG	5 cut(s)	36, 88, 165, 1096, 1589
SmoI	CTYRAG	5 cut(s)	36, 88, 165, 1096, 1589
Sse9I	AATT	4 cut(s)	1871, 2006, 2189, 2198
SseBI	AGGCCT	1 cut(s)	1826
SspI	AATATT	1 cut(s)	1015
SspMI	CTAG	1 cut(s)	957
StuI	AGGCCT	1 cut(s)	1826
StyD4I	CCNGG	3 cut(s)	582, 800, 1219
TaaI	ACNGT	8 cut(s)	481, 519, 615, 920, 953, 1362, 1819, 1989
TaiI	ACGT	5 cut(s)	160, 1351, 1507, 1925, 2099
TaqI	TCGA	7 cut(s)	6, 241, 245, 686, 763, 1375, 1677
TasI	AATT	4 cut(s)	1871, 2006, 2189, 2198
TatI	WGTACW	6 cut(s)	700, 953, 1146, 1184, 1422, 1912
TauI	GCSGC	4 cut(s)	564, 1961, 2048, 2120
TfiI	GAWTC	8 cut(s)	488, 672, 1089, 1177, 1459, 1471, 1710, 1929
Tru1I	TTAA	8 cut(s)	195, 414, 776, 1017, 1097, 1590, 1731, 1829
Tru9I	TTAA	8 cut(s)	195, 414, 776, 1017, 1097, 1590, 1731, 1829
TscAI	CASTG	4 cut(s)	52, 1367, 1612, 1696
TseFI	GTSAC	3 cut(s)	546, 1349, 1751
TseI	GCWGC	5 cut(s)	833, 1001, 1976, 2048, 2051
Tsp45I	GTSAC	3 cut(s)	546, 1349, 1751
TspDTI	ATGAA	8 cut(s)	400, 494, 610, 1004, 1080, 1467, 1648, 1957
TspGWI	ACGGA	2 cut(s)	370, 1655
TspRI	CASTG	4 cut(s)	52, 1367, 1612, 1696
Vha464I	CTTAAG	2 cut(s)	1096, 1589
VpaK11BI	GGWCC	2 cut(s)	149, 2151
VspI	ATTAAT	1 cut(s)	414
XapI	RAATTY	2 cut(s)	1871, 2198
XceI	RCATGY	2 cut(s)	859, 1294
XmiI	GTMKAC	1 cut(s)	367
XspI	CTAG	1 cut(s)	957
ZrmI	AGTACT	1 cut(s)	1148
Zsp2I	ATGCAT	1 cut(s)	1371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.