Nodulin-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28120 |
| fragaria_vesca | FvH4_3g30820 FvH4_3g30830 |
| malus_domestica | MD03G1126600.v1.1 MD04G1112900.v1.1 MD11G1146900.v1.1 MD11G1147000.v1.1 MD11G1147200.v1.1 MD12G1129200.v1.1 |
| prunus_persica | Prupe.6G110900_v2.0.a1 Prupe.6G111100_v2.0.a1 Prupe.6G111300_v2.0.a1 |
| pyrus_communis | pycom04g10260 pycom04g10300 pycom11g12040 |
| rosa_chinensis | RchiOBHm_Chr5g0056971 RchiOBHm_Chr5g0057001 RchiOBHm_Chr5g0057021 |
| rosa_laevigata | RLG00000035144 RLG00000035145 RLG00000035147 |
| rosa_multiflora | Rmu_sc0002035.1_g000001 Rmu_sc0009185.1_g000006 Rmu_sc0009185.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00023150 Rroxscaffold_1G00023190 Rroxscaffold_1G00023200 |
| rosa_rugosa | Rorug05G0305000 Rorug05G0305100 Rorug05G0305200 |
| rosa_samantha | Rh5AG374200 Rh5AG374500 Rh5AG374600 Rh5BG385300 Rh5BG385400 Rh5BG385700 Rh5CG408500 Rh5CG408900 Rh5CG409100 Rh5DG398600 Rh5DG398900 Rh5DG399100 |
| rosa_wichuraiana | Rw5G035230 Rw5G035250 Rw5G035260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1551 |
| Acc65I | GGTACC | 1 cut(s) | 1276 |
| AccB1I | GGYRCC | 1 cut(s) | 1276 |
| AccBSI | CCGCTC | 1 cut(s) | 1420 |
| AccI | GTMKAC | 1 cut(s) | 1062 |
| AccII | CGCG | 2 cut(s) | 1025, 1268 |
| AciI | CCGC | 7 cut(s) | 563, 723, 731, 894, 956, 1214, 1418 |
| AclI | AACGTT | 3 cut(s) | 201, 1440, 1583 |
| AclWI | GGATC | 1 cut(s) | 1051 |
| AcoI | YGGCCR | 2 cut(s) | 1211, 1252 |
| AcsI | RAATTY | 2 cut(s) | 418, 1718 |
| AfaI | GTAC | 4 cut(s) | 21, 115, 1278, 1379 |
| AfeI | AGCGCT | 1 cut(s) | 739 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 962, 1280 |
| AflII | CTTAAG | 1 cut(s) | 455 |
| AgsI | TTSAA | 7 cut(s) | 43, 166, 800, 1396, 1480, 1704, 1718 |
| AjnI | CCWGG | 1 cut(s) | 1279 |
| AluBI | AGCT | 8 cut(s) | 227, 398, 496, 625, 796, 1050, 1555, 1712 |
| AluI | AGCT | 8 cut(s) | 227, 398, 496, 625, 796, 1050, 1555, 1712 |
| Alw21I | GWGCWC | 2 cut(s) | 1330, 1597 |
| Alw26I | GTCTC | 4 cut(s) | 8, 914, 1131, 1180 |
| Alw44I | GTGCAC | 1 cut(s) | 1326 |
| AlwI | GGATC | 1 cut(s) | 1051 |
| Ama87I | CYCGRG | 3 cut(s) | 1070, 1421, 1494 |
| Aor51HI | AGCGCT | 1 cut(s) | 739 |
| AoxI | GGCC | 3 cut(s) | 1211, 1252, 1473 |
| ApaLI | GTGCAC | 1 cut(s) | 1326 |
| ApeKI | GCWGC | 4 cut(s) | 493, 560, 1555, 1574 |
| ApoI | RAATTY | 2 cut(s) | 418, 1718 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1148, 1692 |
| Asp718I | GGTACC | 1 cut(s) | 1276 |
| AspLEI | GCGC | 2 cut(s) | 92, 740 |
| AsuC2I | CCSGG | 2 cut(s) | 1210, 1274 |
| AsuHPI | GGTGA | 3 cut(s) | 247, 913, 1655 |
| AsuNHI | GCTAGC | 3 cut(s) | 734, 1412, 1612 |
| AvaI | CYCGRG | 3 cut(s) | 1070, 1421, 1494 |
| BaeGI | GKGCMC | 1 cut(s) | 1330 |
| BalI | TGGCCA | 1 cut(s) | 1254 |
| BanI | GGYRCC | 1 cut(s) | 1276 |
| Bbv12I | GWGCWC | 2 cut(s) | 1330, 1597 |
| BbvCI | CCTCAGC | 1 cut(s) | 228 |
| BbvI | GCAGC | 4 cut(s) | 505, 547, 1542, 1586 |
| BccI | CCATC | 2 cut(s) | 45, 1358 |
| BceAI | ACGGC | 3 cut(s) | 1043, 1506, 1543 |
| BciT130I | CCWGG | 1 cut(s) | 1281 |
| BclI | TGATCA | 1 cut(s) | 880 |
| BcnI | CCSGG | 2 cut(s) | 1210, 1274 |
| BcoDI | GTCTC | 4 cut(s) | 8, 914, 1131, 1180 |
| BfaI | CTAG | 4 cut(s) | 735, 1130, 1413, 1613 |
| BfoI | RGCGCY | 1 cut(s) | 741 |
| BfrI | CTTAAG | 1 cut(s) | 455 |
| BglII | AGATCT | 1 cut(s) | 187 |
| BisI | GCNGC | 8 cut(s) | 494, 561, 723, 732, 894, 1214, 1556, 1575 |
| BlpI | GCTNAGC | 1 cut(s) | 324 |
| BlsI | GCNGC | 8 cut(s) | 495, 562, 724, 733, 895, 1215, 1557, 1576 |
| BmcAI | AGTACT | 1 cut(s) | 1379 |
| Bme1390I | CCNGG | 3 cut(s) | 1210, 1274, 1281 |
| BmeT110I | CYCGRG | 3 cut(s) | 1070, 1421, 1494 |
| BmiI | GGNNCC | 3 cut(s) | 97, 367, 1278 |
| BmrFI | CCNGG | 3 cut(s) | 1210, 1274, 1281 |
| BmtI | GCTAGC | 3 cut(s) | 738, 1416, 1616 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1229 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1074, 1106 |
| BpmI | CTGGAG | 1 cut(s) | 114 |
| Bpu10I | CCTNAGC | 2 cut(s) | 228, 1534 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 324 |
| BpuEI | CTTGAG | 1 cut(s) | 1358 |
| BpuMI | CCSGG | 2 cut(s) | 1210, 1274 |
| BsaBI | GATNNNNATC | 1 cut(s) | 879 |
| BsaI | GGTCTC | 1 cut(s) | 8 |
| BsaJI | CCNNGG | 4 cut(s) | 897, 1069, 1090, 1208 |
| BsaWI | WCCGGW | 1 cut(s) | 215 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 186, 216, 387, 417, 1584, 1614 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 962, 1280 |
| Bse118I | RCCGGY | 1 cut(s) | 311 |
| Bse3DI | GCAATG | 2 cut(s) | 690, 690 |
| Bse8I | GATNNNNATC | 1 cut(s) | 879 |
| BseBI | CCWGG | 1 cut(s) | 1281 |
| BseDI | CCNNGG | 4 cut(s) | 897, 1069, 1090, 1208 |
| BseGI | GGATG | 1 cut(s) | 1431 |
| BseJI | GATNNNNATC | 1 cut(s) | 879 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 962, 1280 |
| BseMI | GCAATG | 2 cut(s) | 690, 690 |
| BseMII | CTCAG | 5 cut(s) | 219, 417, 687, 1371, 1665 |
| BseRI | GAGGAG | 1 cut(s) | 450 |
| BseSI | GKGCMC | 1 cut(s) | 1330 |
| BseX3I | CGGCCG | 1 cut(s) | 1211 |
| BseXI | GCAGC | 4 cut(s) | 505, 547, 1542, 1586 |
| Bsh1236I | CGCG | 2 cut(s) | 1025, 1268 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1156, 1214 |
| BshFI | GGCC | 3 cut(s) | 1213, 1254, 1475 |
| BshNI | GGYRCC | 1 cut(s) | 1276 |
| BsiEI | CGRYCG | 2 cut(s) | 1156, 1214 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1330, 1597 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1070, 1421, 1494 |
| BsiSI | CCGG | 4 cut(s) | 216, 312, 1210, 1274 |
| BsiWI | CGTACG | 1 cut(s) | 19 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 962, 1280 |
| BsmAI | GTCTC | 4 cut(s) | 8, 914, 1131, 1180 |
| BsmI | GAATGC | 1 cut(s) | 1461 |
| BsnI | GGCC | 3 cut(s) | 1213, 1254, 1475 |
| Bso31I | GGTCTC | 1 cut(s) | 8 |
| BsoBI | CYCGRG | 3 cut(s) | 1070, 1421, 1494 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1330, 1597 |
| Bsp143I | GATC | 8 cut(s) | 151, 187, 294, 507, 534, 874, 880, 1043 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 324 |
| Bsp68I | TCGCGA | 1 cut(s) | 1025 |
| BspACI | CCGC | 7 cut(s) | 563, 723, 731, 894, 956, 1214, 1418 |
| BspANI | GGCC | 3 cut(s) | 1213, 1254, 1475 |
| BspCNI | CTCAG | 5 cut(s) | 220, 418, 688, 1370, 1666 |
| BspFNI | CGCG | 2 cut(s) | 1025, 1268 |
| BspLI | GGNNCC | 3 cut(s) | 97, 367, 1278 |
| BspOI | GCTAGC | 3 cut(s) | 738, 1416, 1616 |
| BspPI | GGATC | 1 cut(s) | 1051 |
| BspQI | GCTCTTC | 1 cut(s) | 825 |
| BspT107I | GGYRCC | 1 cut(s) | 1276 |
| BspTI | CTTAAG | 1 cut(s) | 455 |
| BspTNI | GGTCTC | 1 cut(s) | 8 |
| BsrBI | CCGCTC | 1 cut(s) | 1420 |
| BsrDI | GCAATG | 2 cut(s) | 690, 690 |
| BsrFI | RCCGGY | 1 cut(s) | 311 |
| BssAI | RCCGGY | 1 cut(s) | 311 |
| BssECI | CCNNGG | 4 cut(s) | 897, 1069, 1090, 1208 |
| BssMI | GATC | 8 cut(s) | 151, 187, 294, 507, 534, 874, 880, 1043 |
| BssT1I | CCWWGG | 1 cut(s) | 897 |
| Bst2UI | CCWGG | 1 cut(s) | 1281 |
| Bst4CI | ACNGT | 5 cut(s) | 19, 307, 778, 943, 1111 |
| Bst6I | CTCTTC | 2 cut(s) | 825, 906 |
| BstAFI | CTTAAG | 1 cut(s) | 455 |
| BstC8I | GCNNGC | 7 cut(s) | 88, 558, 736, 1252, 1414, 1418, 1614 |
| BstF5I | GGATG | 1 cut(s) | 1431 |
| BstFNI | CGCG | 2 cut(s) | 1025, 1268 |
| BstH2I | RGCGCY | 1 cut(s) | 741 |
| BstHHI | GCGC | 2 cut(s) | 92, 740 |
| BstKTI | GATC | 8 cut(s) | 154, 190, 297, 510, 537, 877, 883, 1046 |
| BstMAI | GTCTC | 4 cut(s) | 8, 914, 1131, 1180 |
| BstMBI | GATC | 8 cut(s) | 151, 187, 294, 507, 534, 874, 880, 1043 |
| BstMCI | CGRYCG | 2 cut(s) | 1156, 1214 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 451, 728, 731, 737, 766 |
| BstNI | CCWGG | 1 cut(s) | 1281 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1229 |
| BstSCI | CCNGG | 3 cut(s) | 1208, 1272, 1279 |
| BstSLI | GKGCMC | 1 cut(s) | 1330 |
| BstUI | CGCG | 2 cut(s) | 1025, 1268 |
| BstV1I | GCAGC | 4 cut(s) | 505, 547, 1542, 1586 |
| BstX2I | RGATCY | 1 cut(s) | 187 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 336 |
| BstYI | RGATCY | 1 cut(s) | 187 |
| BstZI | CGGCCG | 1 cut(s) | 1211 |
| BsuRI | GGCC | 3 cut(s) | 1213, 1254, 1475 |
| BtgZI | GCGATG | 2 cut(s) | 284, 1249 |
| BtsCI | GGATG | 1 cut(s) | 1431 |
| BtuMI | TCGCGA | 1 cut(s) | 1025 |
| Cac8I | GCNNGC | 7 cut(s) | 88, 558, 736, 1252, 1414, 1418, 1614 |
| CfoI | GCGC | 2 cut(s) | 92, 740 |
| Cfr10I | RCCGGY | 1 cut(s) | 311 |
| CseI | GACGC | 1 cut(s) | 1287 |
| Csp6I | GTAC | 4 cut(s) | 20, 114, 1277, 1378 |
| CviAII | CATG | 5 cut(s) | 58, 82, 549, 811, 1006 |
| CviQI | GTAC | 4 cut(s) | 20, 114, 1277, 1378 |
| DpnI | GATC | 8 cut(s) | 153, 189, 296, 509, 536, 876, 882, 1045 |
| DpnII | GATC | 8 cut(s) | 151, 187, 294, 507, 534, 874, 880, 1043 |
| DraI | TTTAAA | 1 cut(s) | 184 |
| EaeI | YGGCCR | 2 cut(s) | 1211, 1252 |
| EagI | CGGCCG | 1 cut(s) | 1211 |
| Eam1104I | CTCTTC | 2 cut(s) | 825, 906 |
| EarI | CTCTTC | 2 cut(s) | 825, 906 |
| EclXI | CGGCCG | 1 cut(s) | 1211 |
| Eco130I | CCWWGG | 1 cut(s) | 897 |
| Eco147I | AGGCCT | 1 cut(s) | 1475 |
| Eco31I | GGTCTC | 1 cut(s) | 8 |
| Eco32I | GATATC | 1 cut(s) | 130 |
| Eco47III | AGCGCT | 1 cut(s) | 739 |
| Eco52I | CGGCCG | 1 cut(s) | 1211 |
| Eco88I | CYCGRG | 3 cut(s) | 1070, 1421, 1494 |
| EcoRII | CCWGG | 1 cut(s) | 1279 |
| EcoRV | GATATC | 1 cut(s) | 130 |
| EcoT14I | CCWWGG | 1 cut(s) | 897 |
| ErhI | CCWWGG | 1 cut(s) | 897 |
| FaeI | CATG | 5 cut(s) | 61, 85, 552, 814, 1009 |
| FatI | CATG | 5 cut(s) | 57, 81, 548, 810, 1005 |
| FauI | CCCGC | 1 cut(s) | 1425 |
| FauNDI | CATATG | 1 cut(s) | 1139 |
| FbaI | TGATCA | 1 cut(s) | 880 |
| FblI | GTMKAC | 1 cut(s) | 1062 |
| Fnu4HI | GCNGC | 8 cut(s) | 494, 561, 723, 732, 894, 1214, 1556, 1575 |
| FokI | GGATG | 1 cut(s) | 1418 |
| Fsp4HI | GCNGC | 8 cut(s) | 494, 561, 723, 732, 894, 1214, 1556, 1575 |
| FspBI | CTAG | 4 cut(s) | 735, 1130, 1413, 1613 |
| GlaI | GCGC | 2 cut(s) | 91, 739 |
| GluI | GCNGC | 8 cut(s) | 494, 561, 723, 732, 894, 1214, 1556, 1575 |
| GsuI | CTGGAG | 1 cut(s) | 114 |
| HaeII | RGCGCY | 1 cut(s) | 741 |
| HaeIII | GGCC | 3 cut(s) | 1213, 1254, 1475 |
| HapII | CCGG | 4 cut(s) | 216, 312, 1210, 1274 |
| HgaI | GACGC | 1 cut(s) | 1287 |
| HhaI | GCGC | 2 cut(s) | 92, 740 |
| Hin1II | CATG | 5 cut(s) | 61, 85, 552, 814, 1009 |
| Hin6I | GCGC | 2 cut(s) | 90, 738 |
| HinP1I | GCGC | 2 cut(s) | 90, 738 |
| HpaII | CCGG | 4 cut(s) | 216, 312, 1210, 1274 |
| HphI | GGTGA | 3 cut(s) | 247, 913, 1655 |
| Hpy166II | GTNNAC | 3 cut(s) | 1063, 1328, 1403 |
| Hpy188I | TCNGA | 6 cut(s) | 156, 1180, 1360, 1566, 1681, 1687 |
| Hpy188III | TCNNGA | 9 cut(s) | 28, 878, 884, 937, 1024, 1435, 1673, 1697, 1704 |
| Hpy8I | GTNNAC | 3 cut(s) | 1063, 1328, 1403 |
| Hpy99I | CGWCG | 3 cut(s) | 14, 284, 943 |
| HpyAV | CCTTC | 3 cut(s) | 595, 910, 1268 |
| HpyCH4III | ACNGT | 5 cut(s) | 19, 307, 778, 943, 1111 |
| HpyCH4IV | ACGT | 5 cut(s) | 161, 201, 1440, 1515, 1583 |
| HpyCH4V | TGCA | 4 cut(s) | 386, 482, 1193, 1328 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 451, 728, 731, 737, 766 |
| HpySE526I | ACGT | 5 cut(s) | 161, 201, 1440, 1515, 1583 |
| Hsp92II | CATG | 5 cut(s) | 61, 85, 552, 814, 1009 |
| HspAI | GCGC | 2 cut(s) | 90, 738 |
| KpnI | GGTACC | 1 cut(s) | 1280 |
| Ksp22I | TGATCA | 1 cut(s) | 880 |
| Kzo9I | GATC | 8 cut(s) | 151, 187, 294, 507, 534, 874, 880, 1043 |
| LguI | GCTCTTC | 1 cut(s) | 825 |
| LmnI | GCTCC | 5 cut(s) | 95, 194, 365, 395, 1592 |
| Lsp1109I | GCAGC | 4 cut(s) | 505, 547, 1542, 1586 |
| MaeI | CTAG | 4 cut(s) | 735, 1130, 1413, 1613 |
| MaeII | ACGT | 5 cut(s) | 161, 201, 1440, 1515, 1583 |
| MaeIII | GTNAC | 8 cut(s) | 146, 232, 284, 307, 403, 819, 1447, 1579 |
| MalI | GATC | 8 cut(s) | 153, 189, 296, 509, 536, 876, 882, 1045 |
| MbiI | CCGCTC | 1 cut(s) | 1420 |
| MboI | GATC | 8 cut(s) | 151, 187, 294, 507, 534, 874, 880, 1043 |
| MboII | GAAGA | 7 cut(s) | 31, 60, 478, 610, 842, 923, 980 |
| MfeI | CAATTG | 1 cut(s) | 1396 |
| MflI | RGATCY | 1 cut(s) | 187 |
| MhlI | GDGCHC | 2 cut(s) | 1330, 1597 |
| MlsI | TGGCCA | 1 cut(s) | 1254 |
| MluCI | AATT | 7 cut(s) | 418, 641, 1202, 1302, 1396, 1688, 1718 |
| MluNI | TGGCCA | 1 cut(s) | 1254 |
| MlyI | GAGTC | 4 cut(s) | 1365, 1678, 1685, 1691 |
| MmeI | TCCRAC | 1 cut(s) | 448 |
| Mox20I | TGGCCA | 1 cut(s) | 1254 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1148, 1692 |
| MscI | TGGCCA | 1 cut(s) | 1254 |
| MseI | TTAA | 5 cut(s) | 183, 414, 456, 786, 995 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1004, 1454 |
| Msp20I | TGGCCA | 1 cut(s) | 1254 |
| MspCI | CTTAAG | 1 cut(s) | 455 |
| MspI | CCGG | 4 cut(s) | 216, 312, 1210, 1274 |
| MspR9I | CCNGG | 3 cut(s) | 1210, 1274, 1281 |
| MunI | CAATTG | 1 cut(s) | 1396 |
| Mva1269I | GAATGC | 1 cut(s) | 1461 |
| MvaI | CCWGG | 1 cut(s) | 1281 |
| MvnI | CGCG | 2 cut(s) | 1025, 1268 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 451, 728, 731, 737, 766 |
| NciI | CCSGG | 2 cut(s) | 1210, 1274 |
| NdeI | CATATG | 1 cut(s) | 1139 |
| NdeII | GATC | 8 cut(s) | 151, 187, 294, 507, 534, 874, 880, 1043 |
| NheI | GCTAGC | 3 cut(s) | 734, 1412, 1612 |
| NlaIII | CATG | 5 cut(s) | 61, 85, 552, 814, 1009 |
| NlaIV | GGNNCC | 3 cut(s) | 97, 367, 1278 |
| NmeAIII | GCCGAG | 2 cut(s) | 245, 1071 |
| NmuCI | GTSAC | 2 cut(s) | 232, 1447 |
| NruI | TCGCGA | 1 cut(s) | 1025 |
| PaeR7I | CTCGAG | 1 cut(s) | 1494 |
| PceI | AGGCCT | 1 cut(s) | 1475 |
| PciSI | GCTCTTC | 1 cut(s) | 825 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 15 |
| PctI | GAATGC | 1 cut(s) | 1461 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1148, 1692 |
| PfeI | GAWTC | 6 cut(s) | 24, 31, 521, 1085, 1314, 1700 |
| Pfl23II | CGTACG | 1 cut(s) | 19 |
| PkrI | GCNGC | 8 cut(s) | 495, 562, 724, 733, 895, 1215, 1557, 1576 |
| PleI | GAGTC | 4 cut(s) | 1365, 1677, 1684, 1690 |
| PpsI | GAGTC | 4 cut(s) | 1365, 1677, 1684, 1690 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1229 |
| PsiI | TTATAA | 1 cut(s) | 1551 |
| Psp1406I | AACGTT | 3 cut(s) | 201, 1440, 1583 |
| Psp6I | CCWGG | 1 cut(s) | 1279 |
| PspGI | CCWGG | 1 cut(s) | 1279 |
| PspLI | CGTACG | 1 cut(s) | 19 |
| PspN4I | GGNNCC | 3 cut(s) | 97, 367, 1278 |
| PspXI | VCTCGAGB | 1 cut(s) | 1494 |
| PsuI | RGATCY | 1 cut(s) | 187 |
| RruI | TCGCGA | 1 cut(s) | 1025 |
| RsaI | GTAC | 4 cut(s) | 21, 115, 1278, 1379 |
| RsaNI | GTAC | 4 cut(s) | 20, 114, 1277, 1378 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1004, 1454 |
| SapI | GCTCTTC | 1 cut(s) | 825 |
| SaqAI | TTAA | 5 cut(s) | 183, 414, 456, 786, 995 |
| SatI | GCNGC | 8 cut(s) | 494, 561, 723, 732, 894, 1214, 1556, 1575 |
| Sau3AI | GATC | 8 cut(s) | 151, 187, 294, 507, 534, 874, 880, 1043 |
| ScaI | AGTACT | 1 cut(s) | 1379 |
| SchI | GAGTC | 4 cut(s) | 1365, 1678, 1685, 1691 |
| ScrFI | CCNGG | 3 cut(s) | 1210, 1274, 1281 |
| SduI | GDGCHC | 2 cut(s) | 1330, 1597 |
| Sfr274I | CTCGAG | 1 cut(s) | 1494 |
| SlaI | CTCGAG | 1 cut(s) | 1494 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1004, 1454 |
| SmlI | CTYRAG | 3 cut(s) | 455, 1373, 1494 |
| SmoI | CTYRAG | 3 cut(s) | 455, 1373, 1494 |
| Sse9I | AATT | 7 cut(s) | 418, 641, 1202, 1302, 1396, 1688, 1718 |
| SseBI | AGGCCT | 1 cut(s) | 1475 |
| SsiI | CCGC | 7 cut(s) | 563, 723, 731, 894, 956, 1214, 1418 |
| SspI | AATATT | 1 cut(s) | 981 |
| SspMI | CTAG | 4 cut(s) | 735, 1130, 1413, 1613 |
| StuI | AGGCCT | 1 cut(s) | 1475 |
| StyD4I | CCNGG | 3 cut(s) | 1208, 1272, 1279 |
| StyI | CCWWGG | 1 cut(s) | 897 |
| TaaI | ACNGT | 5 cut(s) | 19, 307, 778, 943, 1111 |
| TaiI | ACGT | 5 cut(s) | 164, 204, 1443, 1518, 1586 |
| TaqI | TCGA | 5 cut(s) | 828, 938, 1046, 1156, 1495 |
| TaqII | GACCGA | 1 cut(s) | 1142 |
| TasI | AATT | 7 cut(s) | 418, 641, 1202, 1302, 1396, 1688, 1718 |
| TatI | WGTACW | 1 cut(s) | 1377 |
| TauI | GCSGC | 4 cut(s) | 725, 734, 896, 1216 |
| TfiI | GAWTC | 6 cut(s) | 24, 31, 521, 1085, 1314, 1700 |
| Tru1I | TTAA | 5 cut(s) | 183, 414, 456, 786, 995 |
| Tru9I | TTAA | 5 cut(s) | 183, 414, 456, 786, 995 |
| TseFI | GTSAC | 2 cut(s) | 232, 1447 |
| TseI | GCWGC | 4 cut(s) | 493, 560, 1555, 1574 |
| Tsp45I | GTSAC | 2 cut(s) | 232, 1447 |
| TspDTI | ATGAA | 5 cut(s) | 46, 287, 698, 701, 830 |
| TspGWI | ACGGA | 1 cut(s) | 772 |
| Vha464I | CTTAAG | 1 cut(s) | 455 |
| VneI | GTGCAC | 1 cut(s) | 1326 |
| XapI | RAATTY | 2 cut(s) | 418, 1718 |
| XhoI | CTCGAG | 1 cut(s) | 1494 |
| XmiI | GTMKAC | 1 cut(s) | 1062 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1148, 1692 |
| XspI | CTAG | 4 cut(s) | 735, 1130, 1413, 1613 |
| ZrmI | AGTACT | 1 cut(s) | 1379 |