Protein trichome birefringence-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G29050 AT2G34070 AT2G34070 |
| fragaria_vesca | FvH4_3g07990 FvH4_3g07990 FvH4_3g17800 FvH4_3g17800 |
| malus_domestica | MD05G1303400.v1.1 MD10G1282500.v1.1 |
| prunus_persica | Prupe.4G059400_v2.0.a1 Prupe.4G059400_v2.0.a1 Prupe.4G059400_v2.0.a1 Prupe.4G059400_v2.0.a1 |
| pyrus_communis | pycom05g28040 pycom10g23560 |
| rosa_chinensis | RchiOBHm_Chr5g0010331 |
| rosa_laevigata | RLG00000031738 |
| rosa_multiflora | Rmu_co8488479.1_g000001 Rmu_sc0007816.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00065920 |
| rosa_rugosa | Rorug04G0450100 |
| rosa_samantha | Rh5AG081400 Rh5BG076300 Rh5BG206000 Rh5CG089600 Rh5DG077000 |
| rosa_wichuraiana | Rw5G007540 Rw5G018870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 722 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 659 |
| AatII | GACGTC | 1 cut(s) | 540 |
| AccB1I | GGYRCC | 1 cut(s) | 1098 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 79 |
| AccIII | TCCGGA | 1 cut(s) | 62 |
| AciI | CCGC | 2 cut(s) | 757, 1077 |
| AclWI | GGATC | 1 cut(s) | 937 |
| AcoI | YGGCCR | 1 cut(s) | 295 |
| AcsI | RAATTY | 1 cut(s) | 290 |
| AcvI | CACGTG | 1 cut(s) | 255 |
| AcyI | GRCGYC | 1 cut(s) | 537 |
| AfaI | GTAC | 2 cut(s) | 323, 699 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 79, 354, 926 |
| AflII | CTTAAG | 1 cut(s) | 317 |
| AflIII | ACRYGT | 2 cut(s) | 100, 432 |
| AgsI | TTSAA | 7 cut(s) | 10, 169, 206, 379, 623, 667, 772 |
| AjnI | CCWGG | 3 cut(s) | 525, 940, 1105 |
| AluBI | AGCT | 3 cut(s) | 632, 1132, 1145 |
| AluI | AGCT | 3 cut(s) | 632, 1132, 1145 |
| Alw26I | GTCTC | 4 cut(s) | 290, 708, 741, 978 |
| AlwI | GGATC | 1 cut(s) | 937 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1095 |
| Ama87I | CYCGRG | 2 cut(s) | 831, 975 |
| Aor13HI | TCCGGA | 1 cut(s) | 62 |
| AoxI | GGCC | 1 cut(s) | 295 |
| ApeKI | GCWGC | 4 cut(s) | 131, 331, 959, 1142 |
| ApoI | RAATTY | 1 cut(s) | 290 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 260, 292, 576, 608 |
| AspS9I | GGNCC | 2 cut(s) | 652, 754 |
| AsuHPI | GGTGA | 3 cut(s) | 284, 425, 775 |
| AvaI | CYCGRG | 2 cut(s) | 831, 975 |
| AvaII | GGWCC | 2 cut(s) | 652, 754 |
| BaeGI | GKGCMC | 1 cut(s) | 260 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 449, 482 |
| BanI | GGYRCC | 1 cut(s) | 1098 |
| BbrPI | CACGTG | 1 cut(s) | 255 |
| BbsI | GAAGAC | 3 cut(s) | 655, 726, 829 |
| BbvI | GCAGC | 4 cut(s) | 143, 343, 971, 1154 |
| BccI | CCATC | 6 cut(s) | 207, 356, 620, 722, 1063, 1067 |
| BceAI | ACGGC | 2 cut(s) | 119, 138 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 1131 |
| BciT130I | CCWGG | 3 cut(s) | 527, 942, 1107 |
| BciVI | GTATCC | 1 cut(s) | 1111 |
| BclI | TGATCA | 1 cut(s) | 805 |
| BcoDI | GTCTC | 4 cut(s) | 290, 708, 741, 978 |
| BfaI | CTAG | 1 cut(s) | 569 |
| BfmI | CTRYAG | 1 cut(s) | 957 |
| BfrI | CTTAAG | 1 cut(s) | 317 |
| BfuI | GTATCC | 1 cut(s) | 1111 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1107 |
| BisI | GCNGC | 4 cut(s) | 132, 332, 960, 1143 |
| BlsI | GCNGC | 4 cut(s) | 133, 333, 961, 1144 |
| BmcAI | AGTACT | 1 cut(s) | 323 |
| Bme1390I | CCNGG | 3 cut(s) | 527, 942, 1107 |
| Bme18I | GGWCC | 2 cut(s) | 652, 754 |
| BmeT110I | CYCGRG | 2 cut(s) | 831, 975 |
| BmgT120I | GGNCC | 2 cut(s) | 652, 754 |
| BmiI | GGNNCC | 5 cut(s) | 67, 471, 616, 1100, 1127 |
| BmrFI | CCNGG | 3 cut(s) | 527, 942, 1107 |
| BmsI | GCATC | 5 cut(s) | 214, 625, 754, 903, 1036 |
| BpiI | GAAGAC | 3 cut(s) | 655, 726, 829 |
| BpuEI | CTTGAG | 2 cut(s) | 479, 690 |
| BsaAI | YACGTR | 1 cut(s) | 255 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1050 |
| BsaHI | GRCGYC | 1 cut(s) | 537 |
| BsaJI | CCNNGG | 6 cut(s) | 78, 353, 610, 844, 890, 940 |
| BsaWI | WCCGGW | 2 cut(s) | 62, 926 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 79, 354, 926 |
| Bse1I | ACTGG | 2 cut(s) | 683, 1100 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1050 |
| BseAI | TCCGGA | 1 cut(s) | 62 |
| BseBI | CCWGG | 3 cut(s) | 527, 942, 1107 |
| BseDI | CCNNGG | 6 cut(s) | 78, 353, 610, 844, 890, 940 |
| BseGI | GGATG | 2 cut(s) | 248, 1051 |
| BseJI | GATNNNNATC | 1 cut(s) | 1050 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 79, 354, 926 |
| BseMII | CTCAG | 2 cut(s) | 413, 1028 |
| BseNI | ACTGG | 2 cut(s) | 683, 1100 |
| BseRI | GAGGAG | 4 cut(s) | 162, 165, 502, 647 |
| BseSI | GKGCMC | 1 cut(s) | 260 |
| BseX3I | CGGCCG | 1 cut(s) | 295 |
| BseXI | GCAGC | 4 cut(s) | 143, 343, 971, 1154 |
| Bsh1285I | CGRYCG | 1 cut(s) | 298 |
| BshFI | GGCC | 1 cut(s) | 297 |
| BshNI | GGYRCC | 1 cut(s) | 1098 |
| BsiEI | CGRYCG | 1 cut(s) | 298 |
| BsiHKCI | CYCGRG | 2 cut(s) | 831, 975 |
| BsiSI | CCGG | 4 cut(s) | 63, 141, 927, 1115 |
| BslFI | GGGAC | 1 cut(s) | 335 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 79, 354, 926 |
| BsmAI | GTCTC | 4 cut(s) | 290, 708, 741, 978 |
| BsmFI | GGGAC | 1 cut(s) | 335 |
| BsnI | GGCC | 1 cut(s) | 297 |
| BsoBI | CYCGRG | 2 cut(s) | 831, 975 |
| Bsp1286I | GDGCHC | 1 cut(s) | 260 |
| Bsp13I | TCCGGA | 1 cut(s) | 62 |
| Bsp143I | GATC | 2 cut(s) | 805, 929 |
| BspACI | CCGC | 2 cut(s) | 757, 1077 |
| BspANI | GGCC | 1 cut(s) | 297 |
| BspCNI | CTCAG | 2 cut(s) | 414, 1029 |
| BspEI | TCCGGA | 1 cut(s) | 62 |
| BspLI | GGNNCC | 5 cut(s) | 67, 471, 616, 1100, 1127 |
| BspMAI | CTGCAG | 1 cut(s) | 961 |
| BspPI | GGATC | 1 cut(s) | 937 |
| BspT107I | GGYRCC | 1 cut(s) | 1098 |
| BspTI | CTTAAG | 1 cut(s) | 317 |
| BsrI | ACTGG | 2 cut(s) | 683, 1100 |
| BssECI | CCNNGG | 6 cut(s) | 78, 353, 610, 844, 890, 940 |
| BssMI | GATC | 2 cut(s) | 805, 929 |
| BssNI | GRCGYC | 1 cut(s) | 537 |
| BssT1I | CCWWGG | 4 cut(s) | 78, 353, 610, 844 |
| Bst2UI | CCWGG | 3 cut(s) | 527, 942, 1107 |
| Bst4CI | ACNGT | 6 cut(s) | 272, 284, 312, 349, 702, 921 |
| Bst6I | CTCTTC | 1 cut(s) | 139 |
| BstACI | GRCGYC | 1 cut(s) | 537 |
| BstAFI | CTTAAG | 1 cut(s) | 317 |
| BstBAI | YACGTR | 1 cut(s) | 255 |
| BstC8I | GCNNGC | 2 cut(s) | 964, 1112 |
| BstDEI | CTNAG | 3 cut(s) | 422, 480, 1037 |
| BstF5I | GGATG | 2 cut(s) | 248, 1051 |
| BstKTI | GATC | 2 cut(s) | 808, 932 |
| BstMAI | GTCTC | 4 cut(s) | 290, 708, 741, 978 |
| BstMBI | GATC | 2 cut(s) | 805, 929 |
| BstMCI | CGRYCG | 1 cut(s) | 298 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 74, 131, 137, 1107 |
| BstNI | CCWGG | 3 cut(s) | 527, 942, 1107 |
| BstNSI | RCATGY | 3 cut(s) | 104, 436, 453 |
| BstSCI | CCNGG | 3 cut(s) | 525, 940, 1105 |
| BstSFI | CTRYAG | 1 cut(s) | 957 |
| BstSLI | GKGCMC | 1 cut(s) | 260 |
| BstV1I | GCAGC | 4 cut(s) | 143, 343, 971, 1154 |
| BstV2I | GAAGAC | 3 cut(s) | 655, 726, 829 |
| BstZI | CGGCCG | 1 cut(s) | 295 |
| BsuI | GTATCC | 1 cut(s) | 1111 |
| BsuRI | GGCC | 1 cut(s) | 297 |
| BtgZI | GCGATG | 1 cut(s) | 1086 |
| BtsCI | GGATG | 2 cut(s) | 248, 1051 |
| BtsIMutI | CAGTG | 4 cut(s) | 419, 676, 737, 1093 |
| Cac8I | GCNNGC | 2 cut(s) | 964, 1112 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1095 |
| Cfr13I | GGNCC | 2 cut(s) | 652, 754 |
| Csp6I | GTAC | 2 cut(s) | 322, 698 |
| CviAII | CATG | 6 cut(s) | 101, 342, 433, 450, 751, 868 |
| CviQI | GTAC | 2 cut(s) | 322, 698 |
| DdeI | CTNAG | 3 cut(s) | 422, 480, 1037 |
| DpnI | GATC | 2 cut(s) | 807, 931 |
| DpnII | GATC | 2 cut(s) | 805, 929 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 659 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 659 |
| EaeI | YGGCCR | 1 cut(s) | 295 |
| EagI | CGGCCG | 1 cut(s) | 295 |
| Eam1104I | CTCTTC | 1 cut(s) | 139 |
| EarI | CTCTTC | 1 cut(s) | 139 |
| EciI | GGCGGA | 1 cut(s) | 1092 |
| EclXI | CGGCCG | 1 cut(s) | 295 |
| Eco130I | CCWWGG | 4 cut(s) | 78, 353, 610, 844 |
| Eco47I | GGWCC | 2 cut(s) | 652, 754 |
| Eco52I | CGGCCG | 1 cut(s) | 295 |
| Eco72I | CACGTG | 1 cut(s) | 255 |
| Eco88I | CYCGRG | 2 cut(s) | 831, 975 |
| EcoRII | CCWGG | 3 cut(s) | 525, 940, 1105 |
| EcoT14I | CCWWGG | 4 cut(s) | 78, 353, 610, 844 |
| ErhI | CCWWGG | 4 cut(s) | 78, 353, 610, 844 |
| FaeI | CATG | 6 cut(s) | 104, 345, 436, 453, 754, 871 |
| FaqI | GGGAC | 1 cut(s) | 335 |
| FatI | CATG | 6 cut(s) | 100, 341, 432, 449, 750, 867 |
| FauNDI | CATATG | 1 cut(s) | 1063 |
| FbaI | TGATCA | 1 cut(s) | 805 |
| Fnu4HI | GCNGC | 4 cut(s) | 132, 332, 960, 1143 |
| FokI | GGATG | 2 cut(s) | 235, 1038 |
| Fsp4HI | GCNGC | 4 cut(s) | 132, 332, 960, 1143 |
| FspBI | CTAG | 1 cut(s) | 569 |
| GluI | GCNGC | 4 cut(s) | 132, 332, 960, 1143 |
| HaeIII | GGCC | 1 cut(s) | 297 |
| HapII | CCGG | 4 cut(s) | 63, 141, 927, 1115 |
| Hin1I | GRCGYC | 1 cut(s) | 537 |
| Hin1II | CATG | 6 cut(s) | 104, 345, 436, 453, 754, 871 |
| HincII | GTYRAC | 1 cut(s) | 924 |
| HindII | GTYRAC | 1 cut(s) | 924 |
| HinfI | GANTC | 8 cut(s) | 245, 338, 416, 424, 440, 685, 780, 834 |
| HpaII | CCGG | 4 cut(s) | 63, 141, 927, 1115 |
| HphI | GGTGA | 3 cut(s) | 284, 425, 775 |
| Hpy166II | GTNNAC | 5 cut(s) | 574, 684, 924, 950, 1006 |
| Hpy188III | TCNNGA | 3 cut(s) | 63, 91, 975 |
| Hpy8I | GTNNAC | 5 cut(s) | 574, 684, 924, 950, 1006 |
| Hpy99I | CGWCG | 3 cut(s) | 140, 272, 469 |
| HpyAV | CCTTC | 3 cut(s) | 38, 867, 1112 |
| HpyCH4III | ACNGT | 6 cut(s) | 272, 284, 312, 349, 702, 921 |
| HpyCH4IV | ACGT | 3 cut(s) | 87, 254, 537 |
| HpyCH4V | TGCA | 6 cut(s) | 345, 903, 916, 959, 1089, 1142 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 74, 131, 137, 1107 |
| HpyF3I | CTNAG | 3 cut(s) | 422, 480, 1037 |
| HpySE526I | ACGT | 3 cut(s) | 87, 254, 537 |
| Hsp92I | GRCGYC | 1 cut(s) | 537 |
| Hsp92II | CATG | 6 cut(s) | 104, 345, 436, 453, 754, 871 |
| Kpn2I | TCCGGA | 1 cut(s) | 62 |
| Ksp22I | TGATCA | 1 cut(s) | 805 |
| Kzo9I | GATC | 2 cut(s) | 805, 929 |
| LmnI | GCTCC | 3 cut(s) | 65, 614, 629 |
| Lsp1109I | GCAGC | 4 cut(s) | 143, 343, 971, 1154 |
| LweI | GCATC | 5 cut(s) | 214, 625, 754, 903, 1036 |
| MaeI | CTAG | 1 cut(s) | 569 |
| MaeII | ACGT | 3 cut(s) | 87, 254, 537 |
| MaeIII | GTNAC | 4 cut(s) | 194, 413, 538, 1091 |
| MalI | GATC | 2 cut(s) | 807, 931 |
| MboI | GATC | 2 cut(s) | 805, 929 |
| MboII | GAAGA | 8 cut(s) | 23, 156, 391, 635, 655, 726, 829, 832 |
| MhlI | GDGCHC | 1 cut(s) | 260 |
| MluCI | AATT | 2 cut(s) | 290, 667 |
| MlyI | GAGTC | 5 cut(s) | 410, 433, 679, 774, 843 |
| MroI | TCCGGA | 1 cut(s) | 62 |
| MseI | TTAA | 4 cut(s) | 318, 606, 816, 983 |
| MslI | CAYNNNNRTG | 1 cut(s) | 253 |
| MspCI | CTTAAG | 1 cut(s) | 317 |
| MspI | CCGG | 4 cut(s) | 63, 141, 927, 1115 |
| MspR9I | CCNGG | 3 cut(s) | 527, 942, 1107 |
| MvaI | CCWGG | 3 cut(s) | 527, 942, 1107 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 74, 131, 137, 1107 |
| NdeI | CATATG | 1 cut(s) | 1063 |
| NdeII | GATC | 2 cut(s) | 805, 929 |
| NlaIII | CATG | 6 cut(s) | 104, 345, 436, 453, 754, 871 |
| NlaIV | GGNNCC | 5 cut(s) | 67, 471, 616, 1100, 1127 |
| NmeAIII | GCCGAG | 1 cut(s) | 915 |
| NmuCI | GTSAC | 3 cut(s) | 413, 538, 1091 |
| NspI | RCATGY | 3 cut(s) | 104, 436, 453 |
| PaeR7I | CTCGAG | 1 cut(s) | 975 |
| PciI | ACATGT | 2 cut(s) | 100, 432 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 276 |
| PfeI | GAWTC | 3 cut(s) | 245, 338, 440 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 79 |
| PfoI | TCCNGGA | 1 cut(s) | 525 |
| PkrI | GCNGC | 4 cut(s) | 133, 333, 961, 1144 |
| PleI | GAGTC | 5 cut(s) | 410, 432, 679, 774, 842 |
| PmaCI | CACGTG | 1 cut(s) | 255 |
| PmlI | CACGTG | 1 cut(s) | 255 |
| PpsI | GAGTC | 5 cut(s) | 410, 432, 679, 774, 842 |
| Ppu21I | YACGTR | 1 cut(s) | 255 |
| PscI | ACATGT | 2 cut(s) | 100, 432 |
| PsiI | TTATAA | 1 cut(s) | 722 |
| Psp6I | CCWGG | 3 cut(s) | 525, 940, 1105 |
| PspCI | CACGTG | 1 cut(s) | 255 |
| PspGI | CCWGG | 3 cut(s) | 525, 940, 1105 |
| PspN4I | GGNNCC | 5 cut(s) | 67, 471, 616, 1100, 1127 |
| PspPI | GGNCC | 2 cut(s) | 652, 754 |
| PstI | CTGCAG | 1 cut(s) | 961 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1095 |
| RsaI | GTAC | 2 cut(s) | 323, 699 |
| RsaNI | GTAC | 2 cut(s) | 322, 698 |
| RseI | CAYNNNNRTG | 1 cut(s) | 253 |
| SaqAI | TTAA | 4 cut(s) | 318, 606, 816, 983 |
| SatI | GCNGC | 4 cut(s) | 132, 332, 960, 1143 |
| Sau3AI | GATC | 2 cut(s) | 805, 929 |
| Sau96I | GGNCC | 2 cut(s) | 652, 754 |
| ScaI | AGTACT | 1 cut(s) | 323 |
| SchI | GAGTC | 5 cut(s) | 410, 433, 679, 774, 843 |
| ScrFI | CCNGG | 3 cut(s) | 527, 942, 1107 |
| SduI | GDGCHC | 1 cut(s) | 260 |
| SfaNI | GCATC | 5 cut(s) | 214, 625, 754, 903, 1036 |
| SfcI | CTRYAG | 1 cut(s) | 957 |
| Sfr274I | CTCGAG | 1 cut(s) | 975 |
| SinI | GGWCC | 2 cut(s) | 652, 754 |
| SlaI | CTCGAG | 1 cut(s) | 975 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 253 |
| SmlI | CTYRAG | 4 cut(s) | 317, 494, 705, 975 |
| SmoI | CTYRAG | 4 cut(s) | 317, 494, 705, 975 |
| Sse9I | AATT | 2 cut(s) | 290, 667 |
| SsiI | CCGC | 2 cut(s) | 757, 1077 |
| SspMI | CTAG | 1 cut(s) | 569 |
| StyD4I | CCNGG | 3 cut(s) | 525, 940, 1105 |
| StyI | CCWWGG | 4 cut(s) | 78, 353, 610, 844 |
| TaaI | ACNGT | 6 cut(s) | 272, 284, 312, 349, 702, 921 |
| TaiI | ACGT | 3 cut(s) | 90, 257, 540 |
| TaqI | TCGA | 6 cut(s) | 222, 267, 279, 976, 1014, 1151 |
| TasI | AATT | 2 cut(s) | 290, 667 |
| TatI | WGTACW | 2 cut(s) | 321, 697 |
| TfiI | GAWTC | 3 cut(s) | 245, 338, 440 |
| Tru1I | TTAA | 4 cut(s) | 318, 606, 816, 983 |
| Tru9I | TTAA | 4 cut(s) | 318, 606, 816, 983 |
| TscAI | CASTG | 4 cut(s) | 426, 683, 744, 1100 |
| TseFI | GTSAC | 3 cut(s) | 413, 538, 1091 |
| TseI | GCWGC | 4 cut(s) | 131, 331, 959, 1142 |
| Tsp45I | GTSAC | 3 cut(s) | 413, 538, 1091 |
| TspDTI | ATGAA | 3 cut(s) | 237, 253, 330 |
| TspGWI | ACGGA | 1 cut(s) | 1097 |
| TspRI | CASTG | 4 cut(s) | 426, 683, 744, 1100 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 79 |
| Vha464I | CTTAAG | 1 cut(s) | 317 |
| VpaK11BI | GGWCC | 2 cut(s) | 652, 754 |
| XapI | RAATTY | 1 cut(s) | 290 |
| XceI | RCATGY | 3 cut(s) | 104, 436, 453 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 865 |
| XhoI | CTCGAG | 1 cut(s) | 975 |
| XspI | CTAG | 1 cut(s) | 569 |
| ZraI | GACGTC | 1 cut(s) | 538 |
| ZrmI | AGTACT | 1 cut(s) | 323 |