Protein trichome birefringence-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G29050 AT2G34070 AT2G34070 |
| fragaria_vesca | FvH4_3g07990 FvH4_3g07990 FvH4_3g17800 FvH4_3g17800 |
| malus_domestica | MD05G1303400.v1.1 MD10G1282500.v1.1 |
| prunus_persica | Prupe.4G059400_v2.0.a1 Prupe.4G059400_v2.0.a1 Prupe.4G059400_v2.0.a1 Prupe.4G059400_v2.0.a1 |
| pyrus_communis | pycom05g28040 pycom10g23560 |
| rosa_chinensis | RchiOBHm_Chr5g0010331 |
| rosa_laevigata | RLG00000031738 |
| rosa_multiflora | Rmu_co8488479.1_g000001 Rmu_sc0007816.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00065920 |
| rosa_rugosa | Rorug04G0450100 |
| rosa_samantha | Rh5AG081400 Rh5BG076300 Rh5BG206000 Rh5CG089600 Rh5DG077000 |
| rosa_wichuraiana | Rw5G007540 Rw5G018870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 593 |
| AatII | GACGTC | 1 cut(s) | 531 |
| Acc36I | ACCTGC | 1 cut(s) | 294 |
| AccB1I | GGYRCC | 2 cut(s) | 406, 880 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 893 |
| AccI | GTMKAC | 1 cut(s) | 735 |
| AciI | CCGC | 3 cut(s) | 493, 851, 999 |
| AclWI | GGATC | 1 cut(s) | 868 |
| AcoI | YGGCCR | 3 cut(s) | 79, 532, 638 |
| AcuI | CTGAAG | 1 cut(s) | 335 |
| AcyI | GRCGYC | 1 cut(s) | 528 |
| AfaI | GTAC | 4 cut(s) | 230, 260, 674, 919 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 799, 805, 857, 877, 893 |
| AflIII | ACRYGT | 2 cut(s) | 369, 588 |
| AgsI | TTSAA | 4 cut(s) | 41, 100, 544, 601 |
| AjnI | CCWGG | 4 cut(s) | 798, 804, 834, 1039 |
| AleI | CACNNNNGTG | 1 cut(s) | 428 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 233, 265 |
| AluBI | AGCT | 7 cut(s) | 20, 44, 77, 126, 192, 547, 893 |
| AluI | AGCT | 7 cut(s) | 20, 44, 77, 126, 192, 547, 893 |
| AlwI | GGATC | 1 cut(s) | 868 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 893, 1029 |
| Ama87I | CYCGRG | 1 cut(s) | 187 |
| AoxI | GGCC | 7 cut(s) | 79, 236, 532, 561, 638, 802, 848 |
| ApeKI | GCWGC | 3 cut(s) | 90, 126, 1023 |
| AspS9I | GGNCC | 5 cut(s) | 439, 618, 685, 802, 848 |
| AsuHPI | GGTGA | 1 cut(s) | 1013 |
| AvaI | CYCGRG | 1 cut(s) | 187 |
| AvaII | GGWCC | 3 cut(s) | 439, 618, 685 |
| BaeGI | GKGCMC | 1 cut(s) | 883 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 386, 419 |
| BalI | TGGCCA | 1 cut(s) | 81 |
| BanI | GGYRCC | 2 cut(s) | 406, 880 |
| BbsI | GAAGAC | 2 cut(s) | 531, 589 |
| BbvI | GCAGC | 3 cut(s) | 102, 113, 1035 |
| BccI | CCATC | 2 cut(s) | 293, 315 |
| BceAI | ACGGC | 2 cut(s) | 484, 519 |
| BciT130I | CCWGG | 4 cut(s) | 800, 806, 836, 1041 |
| BfuAI | ACCTGC | 1 cut(s) | 294 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 87 |
| BisI | GCNGC | 4 cut(s) | 91, 127, 851, 1024 |
| BlsI | GCNGC | 4 cut(s) | 92, 128, 852, 1025 |
| BmcAI | AGTACT | 1 cut(s) | 919 |
| Bme1390I | CCNGG | 4 cut(s) | 800, 806, 836, 1041 |
| Bme18I | GGWCC | 3 cut(s) | 439, 618, 685 |
| BmeT110I | CYCGRG | 1 cut(s) | 187 |
| BmgT120I | GGNCC | 5 cut(s) | 439, 618, 685, 802, 848 |
| BmiI | GGNNCC | 6 cut(s) | 14, 408, 441, 620, 882, 1061 |
| BmrFI | CCNGG | 4 cut(s) | 800, 806, 836, 1041 |
| BmrI | ACTGGG | 1 cut(s) | 926 |
| BmsI | GCATC | 3 cut(s) | 196, 967, 1085 |
| BmuI | ACTGGG | 1 cut(s) | 926 |
| BpiI | GAAGAC | 2 cut(s) | 531, 589 |
| BpmI | CTGGAG | 1 cut(s) | 870 |
| BpuEI | CTTGAG | 2 cut(s) | 239, 689 |
| BsaBI | GATNNNNATC | 1 cut(s) | 981 |
| BsaHI | GRCGYC | 1 cut(s) | 528 |
| BsaJI | CCNNGG | 6 cut(s) | 85, 139, 290, 799, 835, 1040 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 799, 805, 857, 877, 893 |
| Bse1I | ACTGG | 3 cut(s) | 862, 932, 1034 |
| Bse8I | GATNNNNATC | 1 cut(s) | 981 |
| BseBI | CCWGG | 4 cut(s) | 800, 806, 836, 1041 |
| BseDI | CCNNGG | 6 cut(s) | 85, 139, 290, 799, 835, 1040 |
| BseGI | GGATG | 2 cut(s) | 982, 982 |
| BseJI | GATNNNNATC | 1 cut(s) | 981 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 799, 805, 857, 877, 893 |
| BseMII | CTCAG | 1 cut(s) | 350 |
| BseNI | ACTGG | 3 cut(s) | 862, 932, 1034 |
| BseSI | GKGCMC | 1 cut(s) | 883 |
| BseX3I | CGGCCG | 1 cut(s) | 532 |
| BseXI | GCAGC | 3 cut(s) | 102, 113, 1035 |
| BseYI | CCCAGC | 1 cut(s) | 871 |
| Bsh1285I | CGRYCG | 1 cut(s) | 535 |
| BshFI | GGCC | 7 cut(s) | 81, 238, 534, 563, 640, 804, 850 |
| BshNI | GGYRCC | 2 cut(s) | 406, 880 |
| BsiEI | CGRYCG | 1 cut(s) | 535 |
| BsiHKCI | CYCGRG | 1 cut(s) | 187 |
| BsiSI | CCGG | 2 cut(s) | 239, 564 |
| BslFI | GGGAC | 3 cut(s) | 180, 365, 676 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 799, 805, 857, 877, 893 |
| BsmFI | GGGAC | 3 cut(s) | 180, 365, 676 |
| BsnI | GGCC | 7 cut(s) | 81, 238, 534, 563, 640, 804, 850 |
| BsoBI | CYCGRG | 1 cut(s) | 187 |
| Bsp1286I | GDGCHC | 1 cut(s) | 883 |
| Bsp1407I | TGTACA | 1 cut(s) | 672 |
| Bsp143I | GATC | 2 cut(s) | 634, 860 |
| Bsp19I | CCATGG | 1 cut(s) | 85 |
| BspACI | CCGC | 3 cut(s) | 493, 851, 999 |
| BspANI | GGCC | 7 cut(s) | 81, 238, 534, 563, 640, 804, 850 |
| BspCNI | CTCAG | 1 cut(s) | 351 |
| BspLI | GGNNCC | 6 cut(s) | 14, 408, 441, 620, 882, 1061 |
| BspMI | ACCTGC | 1 cut(s) | 294 |
| BspPI | GGATC | 1 cut(s) | 868 |
| BspT107I | GGYRCC | 2 cut(s) | 406, 880 |
| BsrGI | TGTACA | 1 cut(s) | 672 |
| BsrI | ACTGG | 3 cut(s) | 862, 932, 1034 |
| BssECI | CCNNGG | 6 cut(s) | 85, 139, 290, 799, 835, 1040 |
| BssMI | GATC | 2 cut(s) | 634, 860 |
| BssNI | GRCGYC | 1 cut(s) | 528 |
| BssT1I | CCWWGG | 3 cut(s) | 85, 139, 290 |
| Bst2UI | CCWGG | 4 cut(s) | 800, 806, 836, 1041 |
| Bst4CI | ACNGT | 2 cut(s) | 689, 966 |
| Bst6I | CTCTTC | 1 cut(s) | 311 |
| BstACI | GRCGYC | 1 cut(s) | 528 |
| BstAUI | TGTACA | 1 cut(s) | 672 |
| BstC8I | GCNNGC | 2 cut(s) | 79, 497 |
| BstDEI | CTNAG | 2 cut(s) | 359, 756 |
| BstDSI | CCRYGG | 1 cut(s) | 85 |
| BstEII | GGTNACC | 1 cut(s) | 1001 |
| BstF5I | GGATG | 2 cut(s) | 982, 982 |
| BstKTI | GATC | 2 cut(s) | 637, 863 |
| BstMBI | GATC | 2 cut(s) | 634, 860 |
| BstMCI | CGRYCG | 1 cut(s) | 535 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 74, 87, 244, 1045 |
| BstNI | CCWGG | 4 cut(s) | 800, 806, 836, 1041 |
| BstNSI | RCATGY | 3 cut(s) | 373, 401, 592 |
| BstPI | GGTNACC | 1 cut(s) | 1001 |
| BstSCI | CCNGG | 4 cut(s) | 798, 804, 834, 1039 |
| BstSLI | GKGCMC | 1 cut(s) | 883 |
| BstV1I | GCAGC | 3 cut(s) | 102, 113, 1035 |
| BstV2I | GAAGAC | 2 cut(s) | 531, 589 |
| BstZI | CGGCCG | 1 cut(s) | 532 |
| BsuRI | GGCC | 7 cut(s) | 81, 238, 534, 563, 640, 804, 850 |
| BtgI | CCRYGG | 1 cut(s) | 85 |
| BtsCI | GGATG | 2 cut(s) | 982, 982 |
| BtsI | GCAGTG | 1 cut(s) | 75 |
| BtsIMutI | CAGTG | 3 cut(s) | 75, 356, 1027 |
| BveI | ACCTGC | 1 cut(s) | 294 |
| Cac8I | GCNNGC | 2 cut(s) | 79, 497 |
| CaiI | CAGNNNCTG | 2 cut(s) | 893, 1029 |
| Cfr13I | GGNCC | 5 cut(s) | 439, 618, 685, 802, 848 |
| CseI | GACGC | 1 cut(s) | 390 |
| Csp6I | GTAC | 4 cut(s) | 229, 259, 673, 918 |
| CviAII | CATG | 9 cut(s) | 86, 264, 370, 398, 583, 589, 606, 1056, 1087 |
| CviQI | GTAC | 4 cut(s) | 229, 259, 673, 918 |
| DdeI | CTNAG | 2 cut(s) | 359, 756 |
| DpnI | GATC | 2 cut(s) | 636, 862 |
| DpnII | GATC | 2 cut(s) | 634, 860 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 593 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 593 |
| EaeI | YGGCCR | 3 cut(s) | 79, 532, 638 |
| EagI | CGGCCG | 1 cut(s) | 532 |
| Eam1104I | CTCTTC | 1 cut(s) | 311 |
| EarI | CTCTTC | 1 cut(s) | 311 |
| EclXI | CGGCCG | 1 cut(s) | 532 |
| Eco130I | CCWWGG | 3 cut(s) | 85, 139, 290 |
| Eco32I | GATATC | 1 cut(s) | 447 |
| Eco47I | GGWCC | 3 cut(s) | 439, 618, 685 |
| Eco52I | CGGCCG | 1 cut(s) | 532 |
| Eco57I | CTGAAG | 1 cut(s) | 335 |
| Eco88I | CYCGRG | 1 cut(s) | 187 |
| Eco91I | GGTNACC | 1 cut(s) | 1001 |
| EcoO109I | RGGNCCY | 1 cut(s) | 439 |
| EcoO65I | GGTNACC | 1 cut(s) | 1001 |
| EcoRII | CCWGG | 4 cut(s) | 798, 804, 834, 1039 |
| EcoRV | GATATC | 1 cut(s) | 447 |
| EcoT14I | CCWWGG | 3 cut(s) | 85, 139, 290 |
| EcoT22I | ATGCAT | 1 cut(s) | 1078 |
| ErhI | CCWWGG | 3 cut(s) | 85, 139, 290 |
| FaeI | CATG | 9 cut(s) | 89, 267, 373, 401, 586, 592, 609, 1059, 1090 |
| FaqI | GGGAC | 3 cut(s) | 180, 365, 676 |
| FatI | CATG | 9 cut(s) | 85, 263, 369, 397, 582, 588, 605, 1055, 1086 |
| FblI | GTMKAC | 1 cut(s) | 735 |
| Fnu4HI | GCNGC | 4 cut(s) | 91, 127, 851, 1024 |
| FokI | GGATG | 2 cut(s) | 969, 989 |
| Fsp4HI | GCNGC | 4 cut(s) | 91, 127, 851, 1024 |
| GluI | GCNGC | 4 cut(s) | 91, 127, 851, 1024 |
| GsaI | CCCAGC | 1 cut(s) | 875 |
| GsuI | CTGGAG | 1 cut(s) | 870 |
| HaeIII | GGCC | 7 cut(s) | 81, 238, 534, 563, 640, 804, 850 |
| HapII | CCGG | 2 cut(s) | 239, 564 |
| HgaI | GACGC | 1 cut(s) | 390 |
| Hin1I | GRCGYC | 1 cut(s) | 528 |
| Hin1II | CATG | 9 cut(s) | 89, 267, 373, 401, 586, 592, 609, 1059, 1090 |
| HincII | GTYRAC | 1 cut(s) | 736 |
| HindII | GTYRAC | 1 cut(s) | 736 |
| HinfI | GANTC | 7 cut(s) | 169, 182, 275, 353, 361, 377, 551 |
| HpaII | CCGG | 2 cut(s) | 239, 564 |
| HphI | GGTGA | 1 cut(s) | 1013 |
| Hpy166II | GTNNAC | 3 cut(s) | 457, 618, 736 |
| Hpy188I | TCNGA | 3 cut(s) | 315, 366, 789 |
| Hpy188III | TCNNGA | 3 cut(s) | 464, 656, 887 |
| Hpy8I | GTNNAC | 3 cut(s) | 457, 618, 736 |
| Hpy99I | CGWCG | 2 cut(s) | 406, 533 |
| HpyAV | CCTTC | 6 cut(s) | 171, 208, 228, 430, 762, 967 |
| HpyCH4III | ACNGT | 2 cut(s) | 689, 966 |
| HpyCH4IV | ACGT | 2 cut(s) | 103, 528 |
| HpyCH4V | TGCA | 5 cut(s) | 129, 222, 282, 1023, 1076 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 74, 87, 244, 1045 |
| HpyF3I | CTNAG | 2 cut(s) | 359, 756 |
| HpySE526I | ACGT | 2 cut(s) | 103, 528 |
| Hsp92I | GRCGYC | 1 cut(s) | 528 |
| Hsp92II | CATG | 9 cut(s) | 89, 267, 373, 401, 586, 592, 609, 1059, 1090 |
| Kzo9I | GATC | 2 cut(s) | 634, 860 |
| LmnI | GCTCC | 1 cut(s) | 18 |
| Lsp1109I | GCAGC | 3 cut(s) | 102, 113, 1035 |
| LweI | GCATC | 3 cut(s) | 196, 967, 1085 |
| MaeII | ACGT | 2 cut(s) | 103, 528 |
| MaeIII | GTNAC | 4 cut(s) | 118, 475, 1001, 1013 |
| MalI | GATC | 2 cut(s) | 636, 862 |
| MboI | GATC | 2 cut(s) | 634, 860 |
| MboII | GAAGA | 9 cut(s) | 29, 328, 343, 346, 445, 536, 589, 835, 838 |
| MfeI | CAATTG | 1 cut(s) | 145 |
| MhlI | GDGCHC | 1 cut(s) | 883 |
| MlsI | TGGCCA | 1 cut(s) | 81 |
| MluCI | AATT | 3 cut(s) | 130, 145, 829 |
| MluNI | TGGCCA | 1 cut(s) | 81 |
| MlyI | GAGTC | 4 cut(s) | 269, 347, 370, 545 |
| MmeI | TCCRAC | 1 cut(s) | 812 |
| MnlI | CCTC | 6 cut(s) | 38, 196, 263, 553, 894, 997 |
| Mox20I | TGGCCA | 1 cut(s) | 81 |
| Mph1103I | ATGCAT | 1 cut(s) | 1078 |
| MscI | TGGCCA | 1 cut(s) | 81 |
| MseI | TTAA | 4 cut(s) | 747, 902, 924, 968 |
| MslI | CAYNNNNRTG | 2 cut(s) | 428, 587 |
| Msp20I | TGGCCA | 1 cut(s) | 81 |
| MspA1I | CMGCKG | 2 cut(s) | 77, 126 |
| MspI | CCGG | 2 cut(s) | 239, 564 |
| MspR9I | CCNGG | 4 cut(s) | 800, 806, 836, 1041 |
| MunI | CAATTG | 1 cut(s) | 145 |
| MvaI | CCWGG | 4 cut(s) | 800, 806, 836, 1041 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 74, 87, 244, 1045 |
| NcoI | CCATGG | 1 cut(s) | 85 |
| NdeII | GATC | 2 cut(s) | 634, 860 |
| NlaIII | CATG | 9 cut(s) | 89, 267, 373, 401, 586, 592, 609, 1059, 1090 |
| NlaIV | GGNNCC | 6 cut(s) | 14, 408, 441, 620, 882, 1061 |
| NmeAIII | GCCGAG | 1 cut(s) | 235 |
| NmuCI | GTSAC | 3 cut(s) | 118, 475, 1001 |
| NsiI | ATGCAT | 1 cut(s) | 1078 |
| NspI | RCATGY | 3 cut(s) | 373, 401, 592 |
| OliI | CACNNNNGTG | 1 cut(s) | 428 |
| PaeR7I | CTCGAG | 1 cut(s) | 187 |
| PciI | ACATGT | 2 cut(s) | 369, 588 |
| PfeI | GAWTC | 3 cut(s) | 169, 182, 377 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 893 |
| PkrI | GCNGC | 4 cut(s) | 92, 128, 852, 1025 |
| PleI | GAGTC | 4 cut(s) | 269, 347, 369, 545 |
| PpsI | GAGTC | 4 cut(s) | 269, 347, 369, 545 |
| PpuMI | RGGWCCY | 1 cut(s) | 439 |
| PscI | ACATGT | 2 cut(s) | 369, 588 |
| Psp5II | RGGWCCY | 1 cut(s) | 439 |
| Psp6I | CCWGG | 4 cut(s) | 798, 804, 834, 1039 |
| PspEI | GGTNACC | 1 cut(s) | 1001 |
| PspFI | CCCAGC | 1 cut(s) | 871 |
| PspGI | CCWGG | 4 cut(s) | 798, 804, 834, 1039 |
| PspN4I | GGNNCC | 6 cut(s) | 14, 408, 441, 620, 882, 1061 |
| PspPI | GGNCC | 5 cut(s) | 439, 618, 685, 802, 848 |
| PspPPI | RGGWCCY | 1 cut(s) | 439 |
| PspXI | VCTCGAGB | 1 cut(s) | 187 |
| PstNI | CAGNNNCTG | 2 cut(s) | 893, 1029 |
| PvuII | CAGCTG | 2 cut(s) | 77, 126 |
| RsaI | GTAC | 4 cut(s) | 230, 260, 674, 919 |
| RsaNI | GTAC | 4 cut(s) | 229, 259, 673, 918 |
| RseI | CAYNNNNRTG | 2 cut(s) | 428, 587 |
| SalI | GTCGAC | 1 cut(s) | 734 |
| SaqAI | TTAA | 4 cut(s) | 747, 902, 924, 968 |
| SatI | GCNGC | 4 cut(s) | 91, 127, 851, 1024 |
| Sau3AI | GATC | 2 cut(s) | 634, 860 |
| Sau96I | GGNCC | 5 cut(s) | 439, 618, 685, 802, 848 |
| ScaI | AGTACT | 1 cut(s) | 919 |
| SchI | GAGTC | 4 cut(s) | 269, 347, 370, 545 |
| ScrFI | CCNGG | 4 cut(s) | 800, 806, 836, 1041 |
| SduI | GDGCHC | 1 cut(s) | 883 |
| SfaNI | GCATC | 3 cut(s) | 196, 967, 1085 |
| Sfr274I | CTCGAG | 1 cut(s) | 187 |
| SinI | GGWCC | 3 cut(s) | 439, 618, 685 |
| SlaI | CTCGAG | 1 cut(s) | 187 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 428, 587 |
| SmlI | CTYRAG | 3 cut(s) | 187, 254, 704 |
| SmoI | CTYRAG | 3 cut(s) | 187, 254, 704 |
| Sse9I | AATT | 3 cut(s) | 130, 145, 829 |
| SsiI | CCGC | 3 cut(s) | 493, 851, 999 |
| StyD4I | CCNGG | 4 cut(s) | 798, 804, 834, 1039 |
| StyI | CCWWGG | 3 cut(s) | 85, 139, 290 |
| TaaI | ACNGT | 2 cut(s) | 689, 966 |
| TaiI | ACGT | 2 cut(s) | 106, 531 |
| TaqI | TCGA | 6 cut(s) | 156, 188, 558, 735, 863, 945 |
| TasI | AATT | 3 cut(s) | 130, 145, 829 |
| TatI | WGTACW | 2 cut(s) | 672, 917 |
| TauI | GCSGC | 1 cut(s) | 853 |
| TfiI | GAWTC | 3 cut(s) | 169, 182, 377 |
| Tru1I | TTAA | 4 cut(s) | 747, 902, 924, 968 |
| Tru9I | TTAA | 4 cut(s) | 747, 902, 924, 968 |
| TscAI | CASTG | 3 cut(s) | 75, 363, 1034 |
| TseFI | GTSAC | 3 cut(s) | 118, 475, 1001 |
| TseI | GCWGC | 3 cut(s) | 90, 126, 1023 |
| Tsp45I | GTSAC | 3 cut(s) | 118, 475, 1001 |
| TspDTI | ATGAA | 1 cut(s) | 190 |
| TspGWI | ACGGA | 1 cut(s) | 246 |
| TspRI | CASTG | 3 cut(s) | 75, 363, 1034 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 893 |
| VpaK11BI | GGWCC | 3 cut(s) | 439, 618, 685 |
| XceI | RCATGY | 3 cut(s) | 373, 401, 592 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 842 |
| XhoI | CTCGAG | 1 cut(s) | 187 |
| XmiI | GTMKAC | 1 cut(s) | 735 |
| ZraI | GACGTC | 1 cut(s) | 529 |
| ZrmI | AGTACT | 1 cut(s) | 919 |
| Zsp2I | ATGCAT | 1 cut(s) | 1078 |