Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005270

Physical Location & Seq

Genomic Coordinates Forward (+)

15934244 .. 15937616

Gene Structure 3373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G38080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGGGTCTCATATGGTTTGGTTTCTATTTCTTGTATCCTTCTTCTCTGTGTTCCCAGCTCCATCTGAGAGCATGGTTCGCCACTACAAGTTTAACGTTGTAATGAAGAACGTGACTAGATTATGCTCAAGCAAGCCAACCGTGACCGTCAACGGTAGATATCCAGGTCCCACAATCTACGCACGAGAAGATGACACGTTGCTCATCAAAGTCGTTAATCACGTCAAGTACAACGTCTCCATCCACTGGCACGGTGTGAGACAAGTGAGAACGGGATGGGCTGATGGGCCTGCTTACATAACTCAGTGCCCGATCCAGCCTGGTCAAGTCTACACATACAACTACACTTTGACCGGCCAACGCGGAACGCTCTGGTGGCACGCTCATATCCTCTGGCTCCGAGCCACTGTTTACGGTGCATTGGTCATCCTTCCCAAACGCGGTGTTCCCTATCCTTTCCCCAAACCCGACAATGAGAAAGTCATCGTTCTAGGTGAATGGTGGAAATCGGATACTGAAAATATTATTAATGAGGCGCTTAAGTCTGGATTAGCCCCTAATGTCTCTGACTCTCACATGATCAACGGACACCCAGGCCCAGTTAGAAACTGTCCATCTCAAGGTTACAAACTGTCAGTAGAGAATGGCAAAACCTATCTGCTACGACTAGTCAACGCTGCACTTAATGAAGAACTCTTTTTCAAAGTCGCCGGCCATATTTTCACGGTGGTAGAAGTAGACGCAGTCTATGTTAAACCGTTCAAGACCGACACCGTCCTTATAGCCCCCGGTCAAACCACCAACGTCCTCCTAACCGCCTCAAAATCCGCCGGGAAATACCTTGTAACCGCTTCTCCTTTCATGGACGCCCCAATCGCGGTGGACAACGTAACCGCCACCGCAACTGTTCATTACTCGGGAACACTCTCCTCCTCCCCAACAATCCTCACCCTTCCTCCCCCGCAAAACGCTACTTCCATAGCCAACAACTTCACAAACTCTCTTCGTAGTCTCAACTCCAAGAAGTACCCTGCTCTTGTCCCGACCACCATCGACCACCACCTCTTCTTCACCGTCGGCCTTGGGCTAAACGCATGCCCTACTTGCAAGGCCGGAAACGGAAGCCGTGTCGTGGCTAGCATCAACAATGTAACCTTCATTATGCCTAAAACCGCTTTGCTCCCGGCTCATTACTTCAACACAAGTGGAGTTTTCACGACAGACTTTCCCAAGAATCCACCACACGTTTTCAACTACAGCGGAGGATCAGTCACGAACATGGCCACAGAAACCGGCACAAGGCTCTACAAGCTACCGTATAACGCCACTGTTCAGCTTGTCCTTCAAGATACCGGCGTCATAGCGCCAGAGAACCATCCAGTACATCTTCACGGTTTTAACTTTTTTGAAGTCGGTCGTGGATTAGGTAACTTCAACTCCACGAAAGACCCAAAAAACTTCAATTTGGTAGATCCGGTTGAGAGGAACACAATCGGAGTTCCATCCGGTGGATGGGTCGTCATCAGATTCAGAGCAGATAATCCCGGGGTTTGGTTCATGCATTGTCACTTGGAGGTACACACGACGTGGGGATTAAAGATGGCTTTCTTGGTGGAGAACGGCAAAGGACCCAATCAGTCGATTTTGCCGCCGCCTAAGGATCTTCCCAAGTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009832 GO:0009834 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0042546 GO:0044085 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

558

Amino Acids

61.53

Weight (kDa)

9.31

Isoelectric Point (pI)

33.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	33 - 146	5.4e-42	Multicopper oxidase
Cu-oxidase	PF00394	159 - 307	4.4e-44	Multicopper oxidase
Cu-oxidase_2	PF07731	409 - 541	6.4e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005270)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38080 AT5G01190 AT5G01190
fragaria_vesca	FvH4_6g11960 FvH4_7g23980
malus_domestica	MD04G1147700.v1.1 MD07G1213300.v1.1 MD12G1161000.v1.1
prunus_persica	Prupe.2G245800_v2.0.a1 Prupe.6G271500_v2.0.a1
pyrus_communis	pycom04g13330
rosa_chinensis	RchiOBHm_Chr1g0369321 RchiOBHm_Chr3g0463771
rosa_laevigata	RLG00000024758 RLG00000027137
rosa_multiflora	Rmu_sc0001482.1_g000010 Rmu_sc0003267.1_g000044 Rmu_sc0004796.1_g000014
rosa_roxburghii	Rroxscaffold_4G00287730 Rroxscaffold_6G00416320
rosa_rugosa	Rorug01G0349600 Rorug03G0067400
rosa_samantha	Rh1BG320800 Rh1CG334800 Rh3AG124600 Rh3BG129200 Rh3DG129900
rosa_wichuraiana	Rw1G031500 Rw3G010530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	246, 1508
AccI	GTMKAC	2 cut(s)	330, 738
AccII	CGCG	3 cut(s)	363, 441, 878
AclI	AACGTT	1 cut(s)	96
AclWI	GGATC	4 cut(s)	307, 1273, 1466, 1668
AcoI	YGGCCR	3 cut(s)	355, 712, 1281
AcyI	GRCGYC	2 cut(s)	867, 1356
AdeI	CACNNNGTG	2 cut(s)	256, 1587
AfaI	GTAC	4 cut(s)	230, 1028, 1383, 1578
AfiI	CCNNNNNNNGG	9 cut(s)	246, 440, 620, 877, 1132, 1299, 1508, 1512, 1551
AflII	CTTAAG	1 cut(s)	539
AflIII	ACRYGT	2 cut(s)	195, 1243
AgsI	TTSAA	8 cut(s)	703, 763, 1198, 1252, 1346, 1409, 1435, 1462
AhlI	ACTAGT	1 cut(s)	667
AjiI	CACGTC	2 cut(s)	223, 1587
AjnI	CCWGG	3 cut(s)	163, 319, 592
AluBI	AGCT	3 cut(s)	59, 1312, 1336
AluI	AGCT	3 cut(s)	59, 1312, 1336
Alw26I	GTCTC	5 cut(s)	12, 241, 253, 568, 1016
AlwI	GGATC	4 cut(s)	307, 1273, 1466, 1668
Ama87I	CYCGRG	2 cut(s)	916, 1544
AoxI	GGCC	7 cut(s)	287, 355, 595, 712, 1078, 1110, 1281
ApeKI	GCWGC	1 cut(s)	677
AseI	ATTAAT	1 cut(s)	528
AspLEI	GCGC	2 cut(s)	538, 1366
AspS9I	GGNCC	4 cut(s)	167, 287, 596, 1628
AsuC2I	CCSGG	5 cut(s)	789, 832, 1184, 1545, 1546
AsuHPI	GGTGA	3 cut(s)	506, 940, 1063
AsuNHI	GCTAGC	1 cut(s)	1136
AvaI	CYCGRG	2 cut(s)	916, 1544
AvaII	GGWCC	2 cut(s)	167, 1628
AxyI	CCTNAGG	1 cut(s)	1656
BaeGI	GKGCMC	1 cut(s)	311
BaeI	ACNNNNGTAYC	2 cut(s)	1341, 1374
BalI	TGGCCA	1 cut(s)	1283
BauI	CACGAG	1 cut(s)	183
BbvI	GCAGC	1 cut(s)	664
BceAI	ACGGC	2 cut(s)	1110, 1636
BciT130I	CCWGG	3 cut(s)	165, 321, 594
BciVI	GTATCC	2 cut(s)	46, 505
BclI	TGATCA	1 cut(s)	579
BcnI	CCSGG	5 cut(s)	789, 832, 1184, 1545, 1546
BcoDI	GTCTC	5 cut(s)	12, 241, 253, 568, 1016
BcuI	ACTAGT	1 cut(s)	667
BfaI	CTAG	4 cut(s)	117, 491, 668, 1137
BfmI	CTRYAG	1 cut(s)	1255
BfoI	RGCGCY	2 cut(s)	539, 1367
BfrI	CTTAAG	1 cut(s)	539
BfuI	GTATCC	2 cut(s)	46, 505
BisI	GCNGC	3 cut(s)	678, 1649, 1652
BlsI	GCNGC	3 cut(s)	679, 1650, 1653
Bme1390I	CCNGG	8 cut(s)	165, 321, 594, 789, 832, 1184, 1545, 1546
Bme18I	GGWCC	2 cut(s)	167, 1628
BmeT110I	CYCGRG	2 cut(s)	916, 1544
BmgBI	CACGTC	2 cut(s)	223, 1587
BmgT120I	GGNCC	4 cut(s)	167, 287, 596, 1628
BmiI	GGNNCC	3 cut(s)	169, 398, 1630
BmrFI	CCNGG	8 cut(s)	165, 321, 594, 789, 832, 1184, 1545, 1546
BmrI	ACTGGG	1 cut(s)	593
BmsI	GCATC	1 cut(s)	1149
BmtI	GCTAGC	1 cut(s)	1140
BmuI	ACTGGG	1 cut(s)	593
BpuEI	CTTGAG	2 cut(s)	112, 603
BpuMI	CCSGG	5 cut(s)	789, 832, 1184, 1545, 1546
BsaHI	GRCGYC	2 cut(s)	867, 1356
BsaI	GGTCTC	1 cut(s)	12
BsaJI	CCNNGG	5 cut(s)	592, 787, 1081, 1544, 1545
BsaWI	WCCGGW	2 cut(s)	1474, 1505
Bsc4I	CCNNNNNNNGG	9 cut(s)	246, 440, 620, 877, 1132, 1299, 1508, 1512, 1551
Bse118I	RCCGGY	4 cut(s)	353, 710, 1292, 1352
Bse1I	ACTGG	3 cut(s)	251, 599, 1379
Bse21I	CCTNAGG	1 cut(s)	1656
BseBI	CCWGG	3 cut(s)	165, 321, 594
BseDI	CCNNGG	5 cut(s)	592, 787, 1081, 1544, 1545
BseGI	GGATG	6 cut(s)	240, 281, 426, 1375, 1502, 1517
BseLI	CCNNNNNNNGG	9 cut(s)	246, 440, 620, 877, 1132, 1299, 1508, 1512, 1551
BseMII	CTCAG	2 cut(s)	57, 317
BseNI	ACTGG	3 cut(s)	251, 599, 1379
BseRI	GAGGAG	2 cut(s)	919, 922
BseSI	GKGCMC	1 cut(s)	311
BseXI	GCAGC	1 cut(s)	664
BseYI	CCCAGC	1 cut(s)	55
BsgI	GTGCAG	1 cut(s)	663
Bsh1236I	CGCG	3 cut(s)	363, 441, 878
Bsh1285I	CGRYCG	1 cut(s)	1417
BshFI	GGCC	7 cut(s)	289, 357, 597, 714, 1080, 1112, 1283
BsiEI	CGRYCG	1 cut(s)	1417
BsiHKCI	CYCGRG	2 cut(s)	916, 1544
BslFI	GGGAC	2 cut(s)	153, 1025
BslI	CCNNNNNNNGG	9 cut(s)	246, 440, 620, 877, 1132, 1299, 1508, 1512, 1551
BsmAI	GTCTC	5 cut(s)	12, 241, 253, 568, 1016
BsmBI	CGTCTC	1 cut(s)	241
BsmFI	GGGAC	2 cut(s)	153, 1025
BsnI	GGCC	7 cut(s)	289, 357, 597, 714, 1080, 1112, 1283
Bso31I	GGTCTC	1 cut(s)	12
BsoBI	CYCGRG	2 cut(s)	916, 1544
Bsp1286I	GDGCHC	1 cut(s)	311
Bsp143I	GATC	5 cut(s)	312, 579, 1265, 1471, 1660
BspANI	GGCC	7 cut(s)	289, 357, 597, 714, 1080, 1112, 1283
BspCNI	CTCAG	2 cut(s)	58, 316
BspFNI	CGCG	3 cut(s)	363, 441, 878
BspLI	GGNNCC	3 cut(s)	169, 398, 1630
BspOI	GCTAGC	1 cut(s)	1140
BspPI	GGATC	4 cut(s)	307, 1273, 1466, 1668
BspTI	CTTAAG	1 cut(s)	539
BspTNI	GGTCTC	1 cut(s)	12
BsrFI	RCCGGY	4 cut(s)	353, 710, 1292, 1352
BsrI	ACTGG	3 cut(s)	251, 599, 1379
BssAI	RCCGGY	4 cut(s)	353, 710, 1292, 1352
BssECI	CCNNGG	5 cut(s)	592, 787, 1081, 1544, 1545
BssMI	GATC	5 cut(s)	312, 579, 1265, 1471, 1660
BssNI	GRCGYC	2 cut(s)	867, 1356
BssSI	CACGAG	1 cut(s)	183
BssT1I	CCWWGG	1 cut(s)	1081
Bst2BI	CACGAG	1 cut(s)	183
Bst2UI	CCWGG	3 cut(s)	165, 321, 594
Bst6I	CTCTTC	2 cut(s)	1008, 1070
BstACI	GRCGYC	2 cut(s)	867, 1356
BstAFI	CTTAAG	1 cut(s)	539
BstC8I	GCNNGC	6 cut(s)	134, 291, 381, 712, 1096, 1138
BstDEI	CTNAG	3 cut(s)	66, 303, 1656
BstF5I	GGATG	6 cut(s)	240, 281, 426, 1375, 1502, 1517
BstFNI	CGCG	3 cut(s)	363, 441, 878
BstH2I	RGCGCY	2 cut(s)	539, 1367
BstHHI	GCGC	2 cut(s)	538, 1366
BstKTI	GATC	5 cut(s)	315, 582, 1268, 1474, 1663
BstMAI	GTCTC	5 cut(s)	12, 241, 253, 568, 1016
BstMBI	GATC	5 cut(s)	312, 579, 1265, 1471, 1660
BstMCI	CGRYCG	1 cut(s)	1417
BstMWI	GCNNNNNNNGC	5 cut(s)	78, 376, 875, 1104, 1309
BstNI	CCWGG	3 cut(s)	165, 321, 594
BstNSI	RCATGY	1 cut(s)	1098
BstSCI	CCNGG	8 cut(s)	163, 319, 592, 787, 830, 1182, 1543, 1544
BstSFI	CTRYAG	1 cut(s)	1255
BstSLI	GKGCMC	1 cut(s)	311
BstUI	CGCG	3 cut(s)	363, 441, 878
BstV1I	GCAGC	1 cut(s)	664
BstX2I	RGATCY	2 cut(s)	1471, 1660
BstYI	RGATCY	2 cut(s)	1471, 1660
Bsu36I	CCTNAGG	1 cut(s)	1656
BsuI	GTATCC	2 cut(s)	46, 505
BsuRI	GGCC	7 cut(s)	289, 357, 597, 714, 1080, 1112, 1283
BtrI	CACGTC	2 cut(s)	223, 1587
BtsCI	GGATG	6 cut(s)	240, 281, 426, 1375, 1502, 1517
BtsIMutI	CAGTG	4 cut(s)	244, 311, 405, 1326
Cac8I	GCNNGC	6 cut(s)	134, 291, 381, 712, 1096, 1138
CfoI	GCGC	2 cut(s)	538, 1366
Cfr10I	RCCGGY	4 cut(s)	353, 710, 1292, 1352
Cfr13I	GGNCC	4 cut(s)	167, 287, 596, 1628
Cfr9I	CCCGGG	1 cut(s)	1544
CseI	GACGC	3 cut(s)	749, 875, 1345
Csp6I	GTAC	4 cut(s)	229, 1027, 1382, 1577
CspCI	CAANNNNNGTGG	4 cut(s)	861, 896, 1186, 1221
CviAII	CATG	6 cut(s)	73, 577, 862, 1095, 1279, 1558
CviQI	GTAC	4 cut(s)	229, 1027, 1382, 1577
DdeI	CTNAG	3 cut(s)	66, 303, 1656
DpnI	GATC	5 cut(s)	314, 581, 1267, 1473, 1662
DpnII	GATC	5 cut(s)	312, 579, 1265, 1471, 1660
DraIII	CACNNNGTG	2 cut(s)	256, 1587
EaeI	YGGCCR	3 cut(s)	355, 712, 1281
Eam1104I	CTCTTC	2 cut(s)	1008, 1070
EarI	CTCTTC	2 cut(s)	1008, 1070
EciI	GGCGGA	1 cut(s)	817
Eco130I	CCWWGG	1 cut(s)	1081
Eco31I	GGTCTC	1 cut(s)	12
Eco32I	GATATC	1 cut(s)	161
Eco47I	GGWCC	2 cut(s)	167, 1628
Eco81I	CCTNAGG	1 cut(s)	1656
Eco88I	CYCGRG	2 cut(s)	916, 1544
EcoO109I	RGGNCCY	2 cut(s)	167, 1628
EcoRII	CCWGG	3 cut(s)	163, 319, 592
EcoRV	GATATC	1 cut(s)	161
EcoT14I	CCWWGG	1 cut(s)	1081
EcoT22I	ATGCAT	1 cut(s)	1563
ErhI	CCWWGG	1 cut(s)	1081
Esp3I	CGTCTC	1 cut(s)	241
FaeI	CATG	6 cut(s)	76, 580, 865, 1098, 1282, 1561
FaqI	GGGAC	2 cut(s)	153, 1025
FatI	CATG	6 cut(s)	72, 576, 861, 1094, 1278, 1557
FauI	CCCGC	1 cut(s)	969
FauNDI	CATATG	1 cut(s)	12
FbaI	TGATCA	1 cut(s)	579
FblI	GTMKAC	2 cut(s)	330, 738
Fnu4HI	GCNGC	3 cut(s)	678, 1649, 1652
FokI	GGATG	6 cut(s)	227, 288, 413, 1362, 1489, 1524
Fsp4HI	GCNGC	3 cut(s)	678, 1649, 1652
FspBI	CTAG	4 cut(s)	117, 491, 668, 1137
GlaI	GCGC	2 cut(s)	537, 1365
GluI	GCNGC	3 cut(s)	678, 1649, 1652
GsaI	CCCAGC	1 cut(s)	59
HaeII	RGCGCY	2 cut(s)	539, 1367
HaeIII	GGCC	7 cut(s)	289, 357, 597, 714, 1080, 1112, 1283
HgaI	GACGC	3 cut(s)	749, 875, 1345
HhaI	GCGC	2 cut(s)	538, 1366
Hin1I	GRCGYC	2 cut(s)	867, 1356
Hin1II	CATG	6 cut(s)	76, 580, 865, 1098, 1282, 1561
Hin6I	GCGC	2 cut(s)	536, 1364
HinP1I	GCGC	2 cut(s)	536, 1364
HincII	GTYRAC	2 cut(s)	151, 673
HindII	GTYRAC	2 cut(s)	151, 673
HinfI	GANTC	3 cut(s)	569, 1234, 1527
HphI	GGTGA	3 cut(s)	506, 940, 1063
Hpy166II	GTNNAC	7 cut(s)	151, 331, 412, 673, 739, 883, 1579
Hpy188I	TCNGA	7 cut(s)	67, 401, 511, 568, 1496, 1526, 1532
Hpy188III	TCNNGA	7 cut(s)	546, 763, 918, 1042, 1216, 1273, 1346
Hpy8I	GTNNAC	7 cut(s)	151, 331, 412, 673, 739, 883, 1579
Hpy99I	CGWCG	2 cut(s)	1079, 1588
HpyAV	CCTTC	5 cut(s)	49, 440, 962, 1165, 1352
HpyCH4IV	ACGT	9 cut(s)	96, 111, 197, 222, 234, 804, 888, 1245, 1586
HpyCH4V	TGCA	4 cut(s)	419, 680, 1107, 1561
HpyF10VI	GCNNNNNNNGC	5 cut(s)	78, 376, 875, 1104, 1309
HpyF3I	CTNAG	3 cut(s)	66, 303, 1656
HpySE526I	ACGT	9 cut(s)	96, 111, 197, 222, 234, 804, 888, 1245, 1586
Hsp92I	GRCGYC	2 cut(s)	867, 1356
Hsp92II	CATG	6 cut(s)	76, 580, 865, 1098, 1282, 1561
HspAI	GCGC	2 cut(s)	536, 1364
KroI	GCCGGC	1 cut(s)	710
KroNI	GCCGGC	1 cut(s)	712
Ksp22I	TGATCA	1 cut(s)	579
Kzo9I	GATC	5 cut(s)	312, 579, 1265, 1471, 1660
LmnI	GCTCC	3 cut(s)	64, 402, 1185
Lsp1109I	GCAGC	1 cut(s)	664
LweI	GCATC	1 cut(s)	1149
MaeI	CTAG	4 cut(s)	117, 491, 668, 1137
MaeII	ACGT	9 cut(s)	96, 111, 197, 222, 234, 804, 888, 1245, 1586
MaeIII	GTNAC	9 cut(s)	112, 142, 623, 844, 889, 1150, 1270, 1427, 1565
MalI	GATC	5 cut(s)	314, 581, 1267, 1473, 1662
MboI	GATC	5 cut(s)	312, 579, 1265, 1471, 1660
MboII	GAAGA	9 cut(s)	34, 118, 200, 701, 995, 1057, 1060, 1379, 1655
MflI	RGATCY	2 cut(s)	1471, 1660
MhlI	GDGCHC	1 cut(s)	311
MlsI	TGGCCA	1 cut(s)	1283
MluCI	AATT	1 cut(s)	1462
MluNI	TGGCCA	1 cut(s)	1283
MlyI	GAGTC	1 cut(s)	563
Mox20I	TGGCCA	1 cut(s)	1283
Mph1103I	ATGCAT	1 cut(s)	1563
MroNI	GCCGGC	1 cut(s)	710
MscI	TGGCCA	1 cut(s)	1283
MseI	TTAA	8 cut(s)	93, 216, 528, 540, 684, 753, 1398, 1595
MslI	CAYNNNNRTG	1 cut(s)	1277
Msp20I	TGGCCA	1 cut(s)	1283
MspA1I	CMGCKG	1 cut(s)	1260
MspCI	CTTAAG	1 cut(s)	539
MspR9I	CCNGG	8 cut(s)	165, 321, 594, 789, 832, 1184, 1545, 1546
MvaI	CCWGG	3 cut(s)	165, 321, 594
MvnI	CGCG	3 cut(s)	363, 441, 878
MwoI	GCNNNNNNNGC	5 cut(s)	78, 376, 875, 1104, 1309
NaeI	GCCGGC	1 cut(s)	712
NciI	CCSGG	5 cut(s)	789, 832, 1184, 1545, 1546
NdeI	CATATG	1 cut(s)	12
NdeII	GATC	5 cut(s)	312, 579, 1265, 1471, 1660
NgoMIV	GCCGGC	1 cut(s)	710
NheI	GCTAGC	1 cut(s)	1136
NlaIII	CATG	6 cut(s)	76, 580, 865, 1098, 1282, 1561
NlaIV	GGNNCC	3 cut(s)	169, 398, 1630
NmuCI	GTSAC	4 cut(s)	112, 142, 1270, 1565
NsiI	ATGCAT	1 cut(s)	1563
NspI	RCATGY	1 cut(s)	1098
PaeI	GCATGC	1 cut(s)	1098
PcsI	WCGNNNNNNNCGW	1 cut(s)	219
PdiI	GCCGGC	1 cut(s)	712
PfeI	GAWTC	2 cut(s)	1234, 1527
PflFI	GACNNNGTC	2 cut(s)	743, 773
PflMI	CCANNNNNTGG	2 cut(s)	246, 1508
PkrI	GCNGC	3 cut(s)	679, 1650, 1653
PleI	GAGTC	1 cut(s)	563
PpsI	GAGTC	1 cut(s)	563
PpuMI	RGGWCCY	2 cut(s)	167, 1628
PshBI	ATTAAT	1 cut(s)	528
Psp1406I	AACGTT	1 cut(s)	96
Psp5II	RGGWCCY	2 cut(s)	167, 1628
Psp6I	CCWGG	3 cut(s)	163, 319, 592
PspFI	CCCAGC	1 cut(s)	55
PspGI	CCWGG	3 cut(s)	163, 319, 592
PspN4I	GGNNCC	3 cut(s)	169, 398, 1630
PspPI	GGNCC	4 cut(s)	167, 287, 596, 1628
PspPPI	RGGWCCY	2 cut(s)	167, 1628
PsuI	RGATCY	2 cut(s)	1471, 1660
PsyI	GACNNNGTC	2 cut(s)	743, 773
RsaI	GTAC	4 cut(s)	230, 1028, 1383, 1578
RsaNI	GTAC	4 cut(s)	229, 1027, 1382, 1577
RseI	CAYNNNNRTG	1 cut(s)	1277
SaqAI	TTAA	8 cut(s)	93, 216, 528, 540, 684, 753, 1398, 1595
SatI	GCNGC	3 cut(s)	678, 1649, 1652
Sau3AI	GATC	5 cut(s)	312, 579, 1265, 1471, 1660
Sau96I	GGNCC	4 cut(s)	167, 287, 596, 1628
SchI	GAGTC	1 cut(s)	563
ScrFI	CCNGG	8 cut(s)	165, 321, 594, 789, 832, 1184, 1545, 1546
SduI	GDGCHC	1 cut(s)	311
SfaNI	GCATC	1 cut(s)	1149
SfcI	CTRYAG	1 cut(s)	1255
SinI	GGWCC	2 cut(s)	167, 1628
SmaI	CCCGGG	1 cut(s)	1546
SmiMI	CAYNNNNRTG	1 cut(s)	1277
SmlI	CTYRAG	3 cut(s)	127, 539, 618
SmoI	CTYRAG	3 cut(s)	127, 539, 618
SpeI	ACTAGT	1 cut(s)	667
SphI	GCATGC	1 cut(s)	1098
Sse9I	AATT	1 cut(s)	1462
SspI	AATATT	1 cut(s)	523
SspMI	CTAG	4 cut(s)	117, 491, 668, 1137
StyD4I	CCNGG	8 cut(s)	163, 319, 592, 787, 830, 1182, 1543, 1544
StyI	CCWWGG	1 cut(s)	1081
TaiI	ACGT	9 cut(s)	99, 114, 200, 225, 237, 807, 891, 1248, 1589
TaqI	TCGA	2 cut(s)	1053, 1640
TaqII	GACCGA	2 cut(s)	782, 1403
TasI	AATT	1 cut(s)	1462
TatI	WGTACW	2 cut(s)	228, 1381
TauI	GCSGC	2 cut(s)	1651, 1654
TfiI	GAWTC	2 cut(s)	1234, 1527
Tru1I	TTAA	8 cut(s)	93, 216, 528, 540, 684, 753, 1398, 1595
Tru9I	TTAA	8 cut(s)	93, 216, 528, 540, 684, 753, 1398, 1595
TscAI	CASTG	4 cut(s)	251, 311, 412, 1333
TseFI	GTSAC	4 cut(s)	112, 142, 1270, 1565
TseI	GCWGC	1 cut(s)	677
Tsp45I	GTSAC	4 cut(s)	112, 142, 1270, 1565
TspDTI	ATGAA	6 cut(s)	119, 702, 850, 899, 1147, 1546
TspGWI	ACGGA	2 cut(s)	600, 1134
TspMI	CCCGGG	1 cut(s)	1544
TspRI	CASTG	4 cut(s)	251, 311, 412, 1333
Tth111I	GACNNNGTC	2 cut(s)	743, 773
Van91I	CCANNNNNTGG	2 cut(s)	246, 1508
Vha464I	CTTAAG	1 cut(s)	539
VpaK11BI	GGWCC	2 cut(s)	167, 1628
VspI	ATTAAT	1 cut(s)	528
XceI	RCATGY	1 cut(s)	1098
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1509
XmaI	CCCGGG	1 cut(s)	1544
XmiI	GTMKAC	2 cut(s)	330, 738
XspI	CTAG	4 cut(s)	117, 491, 668, 1137
Zsp2I	ATGCAT	1 cut(s)	1563

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.