Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0005270

Physical Location & Seq

Genomic Coordinates Reverse (-)

10925829 .. 10929581

Gene Structure 3753 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG129200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGCATTGTGGATTCGAGTGCTTCTACTTCTCTTGGCTTGCCTTCTTCCAGCTTTGGTTGAGAGCAGTGTTCGACACTACAAGTTTAATGTGGTGCTGAAAAACACTACCAGACTATGCTCCACCAAGCCAATTGTAACCATCAACGGTCGTTTCCCAGGGCCAACTCTCTATGCCAGGGAAGACGACACCGTTCTTGTCAGAGTCACCAACCATGTCAAGTACAATGTTTCCATTCACTGGCATGGTATCAGGCAACTCCGGACCGGCTGGGCAGATGGACCAGCATACATCACACAGTGCCCTATTCCTCAAGGCCAAAGCTATGTATACAACTTCACCATCACAGGCCAAAGAGGCACACTTCTTTGGCATGCGCATATTCTCTGGCTTAGGGCCACAGTCCATGGTGCTCTTGTCATTTTGCCCAAGCGTGGTGTGCCGTATCCTTTCCCGACACCCCACAAGGAAGTTCCTGTTGTATTAGGTGAATGGTGGAAATCAGATACTGAAGCAGTGATTAATGAAGCTCTCAAAGGCGGTGTAGCACCTAACGTGTCAGATGCTCACACTATTAACGGTCATCCAGGCTTTGTCGCTCCAAATTGTACCACACAGGGCGGCTTCAAGTTGTCTGTGGAAAGTGGCAAGACTTACTTGCTCCGCATCATCAATGCTGCGCTCAATGAAGAGCTCTTCTTCAAAATTGCCGGACACAGTTTGACGGTGGTGGAAGTCGATGCCACCTATGTAAAACCCTTCAAAATTGACACCATAGTGATTGCCCCTGGACAAACCACCAATGCCCTTATCACCGCAAACCAAAACTCCGGCAAGTACTTGGTCGCCGCCTCTCCCTTCTTGGACACTCCTGCTGTTGCCGTAGACAACCTGACTGCCACGGCCACTCTGCACTACTCAGGCACACTTTCTAACTCGCCCACAACTCTCACTAGCCCCCCTCCTCGAAACGCTACCCAAGTCGCCAACAGTTTTACCAACTCTCTCAGAAGCCTTAATACAAAGACCTTTCCTGCAAAAGTCCCCTTAAAAATTGACCACAGCCTTTACTTCACAGTTGGGCTAGGCGTTAACCCATGTCCTAGTTGCAAAGCCGGTAATGGAAGCCGTGTGGTGGCCAGTGTTAACAACGTCACATTTGTTATGCCAACCACAGCTCTGCTTCAAGCACATTTTTTCAACACTAGTGGGGTTTTCACCTCTGATTTTCCTGCTAACCCACCAAATGCTTTCAATTTTTCTGGAGGTCTGCCAGCAAATTCAAGTTTGGCGACTACAAATGGGACAAAGGTCTATAGGTTGGCTTATAACTCGACTGTTCAACTTGTTATGCAAGACACTGGGATTATAGCCCCTGAGAACCACCCAGTACATTTGCATGGCTTCAATTTCTTTGTGGTTGGCAAGGGACTTGGAAATTACAACCCCAAGACGGATCCTAAGAACTTTAATCTTGTTGATCCTGTTGAAAGGAACACAATTGGTGTTCCATCTGGTGGTTGGGTAGCCATCCGATTTCTCGCAGATAATCCAGGTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009832 GO:0009834 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0042546 GO:0044085 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

520

Amino Acids

56.29

Weight (kDa)

9.41

Isoelectric Point (pI)

29.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	34 - 144	1.8e-40	Multicopper oxidase
Cu-oxidase	PF00394	157 - 308	3.3e-47	Multicopper oxidase
Cu-oxidase_2	PF07731	410 - 519	1.7e-28	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005270)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38080 AT5G01190 AT5G01190
fragaria_vesca	FvH4_6g11960 FvH4_7g23980
malus_domestica	MD04G1147700.v1.1 MD07G1213300.v1.1 MD12G1161000.v1.1
prunus_persica	Prupe.2G245800_v2.0.a1 Prupe.6G271500_v2.0.a1
pyrus_communis	pycom04g13330
rosa_chinensis	RchiOBHm_Chr1g0369321 RchiOBHm_Chr3g0463771
rosa_laevigata	RLG00000024758 RLG00000027137
rosa_multiflora	Rmu_sc0001482.1_g000010 Rmu_sc0003267.1_g000044 Rmu_sc0004796.1_g000014
rosa_roxburghii	Rroxscaffold_4G00287730 Rroxscaffold_6G00416320
rosa_rugosa	Rorug01G0349600 Rorug03G0067400
rosa_samantha	Rh1BG320800 Rh1CG334800 Rh3AG124600 Rh3BG129200 Rh3DG129900
rosa_wichuraiana	Rw1G031500 Rw3G010530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1329
Acc16I	TGCGCA	1 cut(s)	378
AccB7I	CCANNNNNTGG	2 cut(s)	240, 1517
AccI	GTMKAC	2 cut(s)	330, 885
AccIII	TCCGGA	1 cut(s)	261
AciI	CCGC	5 cut(s)	540, 621, 664, 816, 849
AclWI	GGATC	3 cut(s)	1451, 1464, 1475
AcoI	YGGCCR	2 cut(s)	903, 1137
AcsI	RAATTY	1 cut(s)	1279
AcuI	CTGAAG	1 cut(s)	531
AdeI	CACNNNGTG	1 cut(s)	300
AfaI	GTAC	4 cut(s)	224, 610, 839, 1392
AfiI	CCNNNNNNNGG	5 cut(s)	240, 434, 1135, 1453, 1517
AflIII	ACRYGT	1 cut(s)	555
AhlI	ACTAGT	1 cut(s)	1205
AjnI	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
AleI	CACNNNNGTG	1 cut(s)	776
AluBI	AGCT	5 cut(s)	53, 324, 530, 694, 1178
AluI	AGCT	5 cut(s)	53, 324, 530, 694, 1178
Alw21I	GWGCWC	2 cut(s)	415, 696
AlwI	GGATC	3 cut(s)	1451, 1464, 1475
AlwNI	CAGNNNCTG	1 cut(s)	509
Aor13HI	TCCGGA	1 cut(s)	261
AoxI	GGCC	6 cut(s)	161, 316, 349, 396, 903, 1137
ApeKI	GCWGC	1 cut(s)	677
ApoI	RAATTY	1 cut(s)	1279
AseI	ATTAAT	1 cut(s)	522
AspLEI	GCGC	2 cut(s)	379, 682
AspS9I	GGNCC	4 cut(s)	161, 264, 281, 396
AsuHPI	GGTGA	5 cut(s)	199, 331, 500, 805, 1210
AvaII	GGWCC	2 cut(s)	264, 281
BaeGI	GKGCMC	1 cut(s)	305
BalI	TGGCCA	1 cut(s)	1139
BamHI	GGATCC	1 cut(s)	1456
BanII	GRGCYC	1 cut(s)	696
BarI	GAAGNNNNNNTAC	2 cut(s)	1003, 1035
BbsI	GAAGAC	1 cut(s)	189
Bbv12I	GWGCWC	2 cut(s)	415, 696
BbvI	GCAGC	1 cut(s)	664
BccI	CCATC	5 cut(s)	149, 272, 350, 1519, 1538
BceAI	ACGGC	4 cut(s)	427, 866, 918, 1113
BciT130I	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
BciVI	GTATCC	1 cut(s)	456
BcuI	ACTAGT	1 cut(s)	1205
BfaI	CTAG	4 cut(s)	954, 1085, 1104, 1206
BfmI	CTRYAG	1 cut(s)	1315
BfuI	GTATCC	1 cut(s)	456
BglI	GCCNNNNNGGC	1 cut(s)	357
BisI	GCNGC	3 cut(s)	622, 678, 849
BlsI	GCNGC	3 cut(s)	623, 679, 850
BmcAI	AGTACT	1 cut(s)	839
Bme1390I	CCNGG	5 cut(s)	159, 178, 588, 789, 1554
Bme18I	GGWCC	2 cut(s)	264, 281
BmgT120I	GGNCC	4 cut(s)	161, 264, 281, 396
BmiI	GGNNCC	1 cut(s)	1458
BmrFI	CCNGG	5 cut(s)	159, 178, 588, 789, 1554
BmrI	ACTGGG	2 cut(s)	1371, 1382
BmsI	GCATC	3 cut(s)	553, 675, 730
BmuI	ACTGGG	2 cut(s)	1371, 1382
BoxI	GACNNNNGTC	1 cut(s)	1310
BpiI	GAAGAC	1 cut(s)	189
BpmI	CTGGAG	1 cut(s)	1284
Bpu10I	CCTNAGC	1 cut(s)	392
BpuEI	CTTGAG	1 cut(s)	297
BsaJI	CCNNGG	6 cut(s)	157, 158, 177, 406, 787, 900
BsaWI	WCCGGW	1 cut(s)	261
BsaXI	ACNNNNNCTCC	2 cut(s)	812, 842
Bsc4I	CCNNNNNNNGG	5 cut(s)	240, 434, 1135, 1453, 1517
Bse118I	RCCGGY	2 cut(s)	266, 1115
Bse1I	ACTGG	4 cut(s)	245, 1140, 1366, 1388
BseAI	TCCGGA	1 cut(s)	261
BseBI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
BseDI	CCNNGG	6 cut(s)	157, 158, 177, 406, 787, 900
BseGI	GGATG	2 cut(s)	583, 1530
BseLI	CCNNNNNNNGG	5 cut(s)	240, 434, 1135, 1453, 1517
BseMII	CTCAG	3 cut(s)	933, 1021, 1368
BseNI	ACTGG	4 cut(s)	245, 1140, 1366, 1388
BseRI	GAGGAG	1 cut(s)	954
BseSI	GKGCMC	1 cut(s)	305
BseXI	GCAGC	1 cut(s)	664
BseYI	CCCAGC	1 cut(s)	270
BsgI	GTGCAG	1 cut(s)	896
Bsh1285I	CGRYCG	1 cut(s)	151
BshFI	GGCC	6 cut(s)	163, 318, 351, 398, 905, 1139
BsiEI	CGRYCG	1 cut(s)	151
BsiHKAI	GWGCWC	2 cut(s)	415, 696
BsiSI	CCGG	5 cut(s)	262, 267, 711, 831, 1116
BslFI	GGGAC	3 cut(s)	1028, 1318, 1443
BslI	CCNNNNNNNGG	5 cut(s)	240, 434, 1135, 1453, 1517
BsmFI	GGGAC	3 cut(s)	1028, 1318, 1443
BsnI	GGCC	6 cut(s)	163, 318, 351, 398, 905, 1139
Bsp1286I	GDGCHC	3 cut(s)	305, 415, 696
Bsp13I	TCCGGA	1 cut(s)	261
Bsp143I	GATC	2 cut(s)	1456, 1480
Bsp19I	CCATGG	1 cut(s)	406
BspACI	CCGC	5 cut(s)	540, 621, 664, 816, 849
BspANI	GGCC	6 cut(s)	163, 318, 351, 398, 905, 1139
BspCNI	CTCAG	3 cut(s)	932, 1020, 1369
BspEI	TCCGGA	1 cut(s)	261
BspLI	GGNNCC	1 cut(s)	1458
BspPI	GGATC	3 cut(s)	1451, 1464, 1475
BspQI	GCTCTTC	2 cut(s)	684, 701
BsrFI	RCCGGY	2 cut(s)	266, 1115
BsrI	ACTGG	4 cut(s)	245, 1140, 1366, 1388
BssAI	RCCGGY	2 cut(s)	266, 1115
BssECI	CCNNGG	6 cut(s)	157, 158, 177, 406, 787, 900
BssMI	GATC	2 cut(s)	1456, 1480
BssNAI	GTATAC	1 cut(s)	331
BssT1I	CCWWGG	1 cut(s)	406
Bst1107I	GTATAC	1 cut(s)	331
Bst2UI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
Bst6I	CTCTTC	2 cut(s)	684, 701
BstC8I	GCNNGC	3 cut(s)	40, 375, 1275
BstDEI	CTNAG	5 cut(s)	392, 919, 1007, 1377, 1461
BstDSI	CCRYGG	2 cut(s)	406, 900
BstF5I	GGATG	2 cut(s)	583, 1530
BstHHI	GCGC	2 cut(s)	379, 682
BstKTI	GATC	2 cut(s)	1459, 1483
BstMBI	GATC	2 cut(s)	1456, 1480
BstMCI	CGRYCG	1 cut(s)	151
BstMWI	GCNNNNNNNGC	2 cut(s)	357, 439
BstNI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
BstNSI	RCATGY	1 cut(s)	377
BstPAI	GACNNNNGTC	1 cut(s)	1310
BstSCI	CCNGG	5 cut(s)	157, 176, 586, 787, 1552
BstSFI	CTRYAG	1 cut(s)	1315
BstSLI	GKGCMC	1 cut(s)	305
BstV1I	GCAGC	1 cut(s)	664
BstV2I	GAAGAC	1 cut(s)	189
BstX2I	RGATCY	1 cut(s)	1456
BstYI	RGATCY	1 cut(s)	1456
BstZ17I	GTATAC	1 cut(s)	331
BsuI	GTATCC	1 cut(s)	456
BsuRI	GGCC	6 cut(s)	163, 318, 351, 398, 905, 1139
BtgI	CCRYGG	2 cut(s)	406, 900
BtsCI	GGATG	2 cut(s)	583, 1530
BtsI	GCAGTG	2 cut(s)	73, 522
BtsIMutI	CAGTG	6 cut(s)	73, 238, 305, 522, 1147, 1359
Cac8I	GCNNGC	3 cut(s)	40, 375, 1275
CaiI	CAGNNNCTG	1 cut(s)	509
CfoI	GCGC	2 cut(s)	379, 682
Cfr10I	RCCGGY	2 cut(s)	266, 1115
Cfr13I	GGNCC	4 cut(s)	161, 264, 281, 396
CpoI	CGGWCCG	1 cut(s)	264
Csp6I	GTAC	4 cut(s)	223, 609, 838, 1391
CspCI	CAANNNNNGTGG	2 cut(s)	1189, 1224
CspI	CGGWCCG	1 cut(s)	264
CviAII	CATG	6 cut(s)	215, 245, 374, 407, 1098, 1400
CviQI	GTAC	4 cut(s)	223, 609, 838, 1391
DdeI	CTNAG	5 cut(s)	392, 919, 1007, 1377, 1461
DpnI	GATC	2 cut(s)	1458, 1482
DpnII	GATC	2 cut(s)	1456, 1480
DraIII	CACNNNGTG	1 cut(s)	300
EaeI	YGGCCR	2 cut(s)	903, 1137
Eam1104I	CTCTTC	2 cut(s)	684, 701
EarI	CTCTTC	2 cut(s)	684, 701
Ecl136II	GAGCTC	1 cut(s)	694
Eco130I	CCWWGG	1 cut(s)	406
Eco24I	GRGCYC	1 cut(s)	696
Eco47I	GGWCC	2 cut(s)	264, 281
Eco53kI	GAGCTC	1 cut(s)	694
Eco57I	CTGAAG	1 cut(s)	531
EcoICRI	GAGCTC	1 cut(s)	694
EcoRII	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
EcoT14I	CCWWGG	1 cut(s)	406
EcoT38I	GRGCYC	1 cut(s)	696
ErhI	CCWWGG	1 cut(s)	406
FaeI	CATG	6 cut(s)	218, 248, 377, 410, 1101, 1403
FalI	AAGNNNNNCTT	2 cut(s)	641, 673
FaqI	GGGAC	3 cut(s)	1028, 1318, 1443
FatI	CATG	6 cut(s)	214, 244, 373, 406, 1097, 1399
FblI	GTMKAC	2 cut(s)	330, 885
Fnu4HI	GCNGC	3 cut(s)	622, 678, 849
FokI	GGATG	2 cut(s)	570, 1517
FriOI	GRGCYC	1 cut(s)	696
Fsp4HI	GCNGC	3 cut(s)	622, 678, 849
FspAI	RTGCGCAY	1 cut(s)	378
FspBI	CTAG	4 cut(s)	954, 1085, 1104, 1206
FspI	TGCGCA	1 cut(s)	378
GlaI	GCGC	2 cut(s)	378, 681
GluI	GCNGC	3 cut(s)	622, 678, 849
GsaI	CCCAGC	1 cut(s)	274
GsuI	CTGGAG	1 cut(s)	1284
HaeIII	GGCC	6 cut(s)	163, 318, 351, 398, 905, 1139
HapII	CCGG	5 cut(s)	262, 267, 711, 831, 1116
HhaI	GCGC	2 cut(s)	379, 682
Hin1II	CATG	6 cut(s)	218, 248, 377, 410, 1101, 1403
Hin6I	GCGC	2 cut(s)	377, 680
HinP1I	GCGC	2 cut(s)	377, 680
HincII	GTYRAC	2 cut(s)	1093, 1147
HindII	GTYRAC	2 cut(s)	1093, 1147
HinfI	GANTC	2 cut(s)	13, 204
HpaI	GTTAAC	2 cut(s)	1093, 1147
HpaII	CCGG	5 cut(s)	262, 267, 711, 831, 1116
HphI	GGTGA	5 cut(s)	199, 331, 500, 805, 1210
Hpy166II	GTNNAC	4 cut(s)	331, 886, 1093, 1147
Hpy188I	TCNGA	6 cut(s)	203, 505, 562, 1010, 1225, 1535
Hpy188III	TCNNGA	3 cut(s)	262, 454, 1263
Hpy8I	GTNNAC	4 cut(s)	331, 886, 1093, 1147
HpyAV	CCTTC	3 cut(s)	53, 769, 868
HpyCH4IV	ACGT	2 cut(s)	555, 1152
HpyCH4V	TGCA	5 cut(s)	913, 1037, 1110, 1354, 1399
HpyF10VI	GCNNNNNNNGC	2 cut(s)	357, 439
HpyF3I	CTNAG	5 cut(s)	392, 919, 1007, 1377, 1461
HpySE526I	ACGT	2 cut(s)	555, 1152
Hsp92II	CATG	6 cut(s)	218, 248, 377, 410, 1101, 1403
HspAI	GCGC	2 cut(s)	377, 680
Kpn2I	TCCGGA	1 cut(s)	261
KspAI	GTTAAC	2 cut(s)	1093, 1147
Kzo9I	GATC	2 cut(s)	1456, 1480
LguI	GCTCTTC	2 cut(s)	684, 701
LmnI	GCTCC	3 cut(s)	125, 604, 666
Lsp1109I	GCAGC	1 cut(s)	664
LweI	GCATC	3 cut(s)	553, 675, 730
MaeI	CTAG	4 cut(s)	954, 1085, 1104, 1206
MaeII	ACGT	2 cut(s)	555, 1152
MaeIII	GTNAC	3 cut(s)	136, 205, 1153
MalI	GATC	2 cut(s)	1458, 1482
MboI	GATC	2 cut(s)	1456, 1480
MboII	GAAGA	5 cut(s)	38, 194, 688, 691, 701
MfeI	CAATTG	2 cut(s)	132, 1500
MflI	RGATCY	1 cut(s)	1456
MhlI	GDGCHC	3 cut(s)	305, 415, 696
MlsI	TGGCCA	1 cut(s)	1139
MluNI	TGGCCA	1 cut(s)	1139
MlyI	GAGTC	1 cut(s)	213
MnlI	CCTC	7 cut(s)	321, 350, 862, 972, 975, 1231, 1259
Mox20I	TGGCCA	1 cut(s)	1139
MroI	TCCGGA	1 cut(s)	261
MscI	TGGCCA	1 cut(s)	1139
MseI	TTAA	9 cut(s)	87, 522, 576, 1017, 1049, 1092, 1146, 1470, 1561
MslI	CAYNNNNRTG	3 cut(s)	243, 776, 1398
Msp20I	TGGCCA	1 cut(s)	1139
MspI	CCGG	5 cut(s)	262, 267, 711, 831, 1116
MspR9I	CCNGG	5 cut(s)	159, 178, 588, 789, 1554
MunI	CAATTG	2 cut(s)	132, 1500
MvaI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
MwoI	GCNNNNNNNGC	2 cut(s)	357, 439
NcoI	CCATGG	1 cut(s)	406
NdeII	GATC	2 cut(s)	1456, 1480
NlaIII	CATG	6 cut(s)	218, 248, 377, 410, 1101, 1403
NlaIV	GGNNCC	1 cut(s)	1458
NmuCI	GTSAC	2 cut(s)	205, 1153
NsbI	TGCGCA	1 cut(s)	378
NspI	RCATGY	1 cut(s)	377
OliI	CACNNNNGTG	1 cut(s)	776
PaeI	GCATGC	1 cut(s)	377
PasI	CCCWGGG	1 cut(s)	158
PciSI	GCTCTTC	2 cut(s)	684, 701
PfeI	GAWTC	1 cut(s)	13
PflMI	CCANNNNNTGG	2 cut(s)	240, 1517
PkrI	GCNGC	3 cut(s)	623, 679, 850
PleI	GAGTC	1 cut(s)	212
PpsI	GAGTC	1 cut(s)	212
PshAI	GACNNNNGTC	1 cut(s)	1310
PshBI	ATTAAT	1 cut(s)	522
PsiI	TTATAA	1 cut(s)	1329
Psp124BI	GAGCTC	1 cut(s)	696
Psp6I	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
PspFI	CCCAGC	1 cut(s)	270
PspGI	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
PspN4I	GGNNCC	1 cut(s)	1458
PspPI	GGNCC	4 cut(s)	161, 264, 281, 396
PstNI	CAGNNNCTG	1 cut(s)	509
PsuI	RGATCY	1 cut(s)	1456
RsaI	GTAC	4 cut(s)	224, 610, 839, 1392
RsaNI	GTAC	4 cut(s)	223, 609, 838, 1391
RseI	CAYNNNNRTG	3 cut(s)	243, 776, 1398
Rsr2I	CGGWCCG	1 cut(s)	264
RsrII	CGGWCCG	1 cut(s)	264
SacI	GAGCTC	1 cut(s)	696
SapI	GCTCTTC	2 cut(s)	684, 701
SaqAI	TTAA	9 cut(s)	87, 522, 576, 1017, 1049, 1092, 1146, 1470, 1561
SatI	GCNGC	3 cut(s)	622, 678, 849
Sau3AI	GATC	2 cut(s)	1456, 1480
Sau96I	GGNCC	4 cut(s)	161, 264, 281, 396
ScaI	AGTACT	1 cut(s)	839
SchI	GAGTC	1 cut(s)	213
ScrFI	CCNGG	5 cut(s)	159, 178, 588, 789, 1554
SduI	GDGCHC	3 cut(s)	305, 415, 696
SfaNI	GCATC	3 cut(s)	553, 675, 730
SfcI	CTRYAG	1 cut(s)	1315
SinI	GGWCC	2 cut(s)	264, 281
SmiMI	CAYNNNNRTG	3 cut(s)	243, 776, 1398
SmlI	CTYRAG	1 cut(s)	312
SmoI	CTYRAG	1 cut(s)	312
SpeI	ACTAGT	1 cut(s)	1205
SphI	GCATGC	1 cut(s)	377
SsiI	CCGC	5 cut(s)	540, 621, 664, 816, 849
SspMI	CTAG	4 cut(s)	954, 1085, 1104, 1206
SstI	GAGCTC	1 cut(s)	696
StyD4I	CCNGG	5 cut(s)	157, 176, 586, 787, 1552
StyI	CCWWGG	1 cut(s)	406
TaiI	ACGT	2 cut(s)	558, 1155
TaqI	TCGA	5 cut(s)	16, 73, 738, 967, 1334
TatI	WGTACW	3 cut(s)	222, 837, 1390
TauI	GCSGC	2 cut(s)	624, 851
TfiI	GAWTC	1 cut(s)	13
Tru1I	TTAA	9 cut(s)	87, 522, 576, 1017, 1049, 1092, 1146, 1470, 1561
Tru9I	TTAA	9 cut(s)	87, 522, 576, 1017, 1049, 1092, 1146, 1470, 1561
TscAI	CASTG	6 cut(s)	73, 245, 305, 522, 1147, 1366
TseFI	GTSAC	2 cut(s)	205, 1153
TseI	GCWGC	1 cut(s)	677
Tsp45I	GTSAC	2 cut(s)	205, 1153
TspDTI	ATGAA	2 cut(s)	540, 702
TspGWI	ACGGA	1 cut(s)	1469
TspRI	CASTG	6 cut(s)	73, 245, 305, 522, 1147, 1366
Van91I	CCANNNNNTGG	2 cut(s)	240, 1517
VpaK11BI	GGWCC	2 cut(s)	264, 281
VspI	ATTAAT	1 cut(s)	522
XapI	RAATTY	1 cut(s)	1279
XceI	RCATGY	1 cut(s)	377
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1518
XmiI	GTMKAC	2 cut(s)	330, 885
XspI	CTAG	4 cut(s)	954, 1085, 1104, 1206
ZrmI	AGTACT	1 cut(s)	839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.