Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0005270

Physical Location & Seq

Genomic Coordinates Reverse (-)

8711506 .. 8715233

Gene Structure 3728 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00287730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGTTGAGTCCTTGGTTCGACACTATAACTTCAGGGTGGTGTTGAAGAACACAACAAAGCTCTGTTCAAGTAAGGTCATATCCACAGTGAATGGGAAGTTCCCGGGACCAACTCTATATGCAAGGGAAGGTGACACCGTAATTGTTAGGGTGACCAACCATGGCAATCACAATTTGACAATCCACTGGCATGGGGTGAAGCAACTTGGAACAGGTTGGGCAGATGGACCAGCATATATCACACAATGCCCAATACAGCCTGGACAAAATTTCATCTACAAGTTCACACTTACAGGACAAAGAGGCACACTTCTTTGGCATGCACATCACTTATGGCTAAGAGCCACACTACATGGTGCCATTGTCATCTTGCCAAAGCTAGGCACTCCCTACCCTTTTCCCACACCTCAAGAGGAAAGAATCATCATATTATCCGAGTGGTGGAAATCAGATGTTGAAGCTGTAATTGATGAGGCTACACAATCTGGCTTCCCAGCAAATGTTTCTGATGCTCACACTATCAATGGCCATCCAGGACCCGTTCCTGGTTGCTCTTCTCAGGGCTTCACTATACATGTTGAAAGTGGCAAGACTTATTTGCTACGCATCATAAACGCAGCGCTGAATGATGACTTGTTCTTCAAGATTGCGGGGCACAACCTAACAGTTGTTGAAGTCGATGCTTCCTACACGAAACCATTCCAAACCGACACGATATATATCAGTCCAGGCCAAACCACTACAGCACTTTTAGAAGCAAACAAAGATATTGGCAAGTACTTAATATCGGTCTCTCCTTTCATGGATGTCCCAATTGGCATTGACAACTTCACCTCAATGGCTACATTGCGCTACAAATACACCCCTCCAAATCCCACAACCTTCTTGACCAGCATCCCTCCTCAAAACGCAACCCCATTAACACACACATTTATCGACTCCCTTCGAAGCCTCAATTCGAAACAATACCCAGCTAATGTCCCATTAACCATAGACCATTCTCTCTTTTTCACCGTAGGAGTTGGTATTAATCCATGTGACACATGTGTTAATGGTAGCAAGCTAGTGGCTTCTGTTAATAATGTTAGCTTTGTGATGCCAACTATAGCTCTTCTTCAAGCTTATTACTACAGGATAAAGGGAGTCTACACACTTGATTTTCCAGCAAACCCACCAAACTCTTTTAATTACACTGGTACTCCTCCAGTTAACGTCCAGACCACAAATGGTACAAGGCTGTATAGGTTGGGGTACAATTCGACGGTTCAGATTGTGTTACAAGACACTGCTATCATACTACCAGAGAGTCATCCTACCCATCTTCATGGGTCTAATTTCTTTGTGGTTGGGACAGGATTAGGTAATTTTGATCCAGACAAGGACCCGAAAACGTTTAACCTCATCGATCCGGTGGAGAGGAACACAGTGCCAGTGCCAACTGGTGGATGGACTGCAATCAGATTCAGGGCAGATAACCCAGGAATTTGGTTTATGCATTGTCATATAGAATTGCACACAACATGGGGGCTCAAGATGGCATTTTTGGTGGACAATGGGGAAGGCCCAAATGAGTGTCTGCAACCTCCTCCTTCTGATCTTCCAACTTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009832 GO:0009834 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0042546 GO:0044085 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

536

Amino Acids

59.15

Weight (kDa)

6.71

Isoelectric Point (pI)

32.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	16 - 126	3.9e-39	Multicopper oxidase
Cu-oxidase	PF00394	139 - 286	3.7e-43	Multicopper oxidase
Cu-oxidase_2	PF07731	386 - 519	1.6e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005270)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38080 AT5G01190 AT5G01190
fragaria_vesca	FvH4_6g11960 FvH4_7g23980
malus_domestica	MD04G1147700.v1.1 MD07G1213300.v1.1 MD12G1161000.v1.1
prunus_persica	Prupe.2G245800_v2.0.a1 Prupe.6G271500_v2.0.a1
pyrus_communis	pycom04g13330
rosa_chinensis	RchiOBHm_Chr1g0369321 RchiOBHm_Chr3g0463771
rosa_laevigata	RLG00000024758 RLG00000027137
rosa_multiflora	Rmu_sc0001482.1_g000010 Rmu_sc0003267.1_g000044 Rmu_sc0004796.1_g000014
rosa_roxburghii	Rroxscaffold_4G00287730 Rroxscaffold_6G00416320
rosa_rugosa	Rorug01G0349600 Rorug03G0067400
rosa_samantha	Rh1BG320800 Rh1CG334800 Rh3AG124600 Rh3BG129200 Rh3DG129900
rosa_wichuraiana	Rw1G031500 Rw3G010530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	356
AccB7I	CCANNNNNTGG	1 cut(s)	1442
AccI	GTMKAC	1 cut(s)	1146
AciI	CCGC	1 cut(s)	650
AclI	AACGTT	1 cut(s)	1391
AclWI	GGATC	2 cut(s)	1364, 1400
AcoI	YGGCCR	1 cut(s)	526
AcsI	RAATTY	2 cut(s)	268, 1482
AcuI	CTGAAG	1 cut(s)	16
AfaI	GTAC	4 cut(s)	779, 1198, 1231, 1253
AfeI	AGCGCT	1 cut(s)	621
AfiI	CCNNNNNNNGG	4 cut(s)	380, 441, 545, 1442
AflIII	ACRYGT	2 cut(s)	574, 1043
AgsI	TTSAA	7 cut(s)	46, 69, 458, 581, 643, 674, 1118
AjnI	CCWGG	5 cut(s)	259, 532, 544, 727, 1477
AluBI	AGCT	8 cut(s)	61, 379, 461, 974, 1063, 1089, 1109, 1121
AluI	AGCT	8 cut(s)	61, 379, 461, 974, 1063, 1089, 1109, 1121
Alw26I	GTCTC	1 cut(s)	796
AlwI	GGATC	2 cut(s)	1364, 1400
Ama87I	CYCGRG	1 cut(s)	103
Aor51HI	AGCGCT	1 cut(s)	621
AoxI	GGCC	3 cut(s)	526, 730, 1561
ApeKI	GCWGC	1 cut(s)	617
ApoI	RAATTY	2 cut(s)	268, 1482
AseI	ATTAAT	1 cut(s)	1029
Asp700I	GAANNNNTTC	1 cut(s)	698
AspLEI	GCGC	2 cut(s)	622, 852
AspS9I	GGNCC	5 cut(s)	107, 227, 536, 1381, 1562
AsuC2I	CCSGG	2 cut(s)	104, 105
AsuHPI	GGTGA	5 cut(s)	143, 163, 208, 823, 1003
AsuII	TTCGAA	2 cut(s)	946, 959
AvaI	CYCGRG	1 cut(s)	103
AvaII	GGWCC	4 cut(s)	107, 227, 536, 1381
BaeGI	GKGCMC	1 cut(s)	657
BalI	TGGCCA	1 cut(s)	528
BanI	GGYRCC	1 cut(s)	356
BanII	GRGCYC	1 cut(s)	1530
BbvI	GCAGC	1 cut(s)	629
BccI	CCATC	5 cut(s)	218, 537, 1326, 1440, 1528
BciT130I	CCWGG	5 cut(s)	261, 534, 546, 729, 1479
BcnI	CCSGG	2 cut(s)	104, 105
BcoDI	GTCTC	1 cut(s)	796
BfaI	CTAG	3 cut(s)	380, 1064, 1609
BfmI	CTRYAG	3 cut(s)	741, 1104, 1129
BfoI	RGCGCY	1 cut(s)	623
BisI	GCNGC	1 cut(s)	618
BlsI	GCNGC	1 cut(s)	619
BmcAI	AGTACT	1 cut(s)	779
Bme1390I	CCNGG	7 cut(s)	104, 105, 261, 534, 546, 729, 1479
Bme18I	GGWCC	4 cut(s)	107, 227, 536, 1381
BmeT110I	CYCGRG	1 cut(s)	103
BmgT120I	GGNCC	5 cut(s)	107, 227, 536, 1381, 1562
BmiI	GGNNCC	4 cut(s)	108, 358, 538, 1383
BmrFI	CCNGG	7 cut(s)	104, 105, 261, 534, 546, 729, 1479
BmsI	GCATC	5 cut(s)	499, 615, 670, 903, 1086
BpmI	CTGGAG	1 cut(s)	1188
Bpu14I	TTCGAA	2 cut(s)	946, 959
BpuEI	CTTGAG	2 cut(s)	393, 1514
BpuMI	CCSGG	2 cut(s)	104, 105
Bsa29I	ATCGAT	1 cut(s)	1404
BsaBI	GATNNNNATC	1 cut(s)	719
BsaI	GGTCTC	1 cut(s)	796
BsaJI	CCNNGG	4 cut(s)	12, 103, 160, 1477
BsaWI	WCCGGW	1 cut(s)	1408
BsaXI	ACNNNNNCTCC	2 cut(s)	1183, 1213
Bsc4I	CCNNNNNNNGG	4 cut(s)	380, 441, 545, 1442
Bse1I	ACTGG	5 cut(s)	191, 1198, 1205, 1430, 1444
Bse3DI	GCAATG	1 cut(s)	845
Bse8I	GATNNNNATC	1 cut(s)	719
BseBI	CCWGG	5 cut(s)	261, 534, 546, 729, 1479
BseCI	ATCGAT	1 cut(s)	1404
BseDI	CCNNGG	4 cut(s)	12, 103, 160, 1477
BseGI	GGATG	5 cut(s)	529, 811, 894, 1309, 1451
BseJI	GATNNNNATC	1 cut(s)	719
BseLI	CCNNNNNNNGG	4 cut(s)	380, 441, 545, 1442
BseMI	GCAATG	1 cut(s)	845
BseMII	CTCAG	1 cut(s)	572
BseNI	ACTGG	5 cut(s)	191, 1198, 1205, 1430, 1444
BseRI	GAGGAG	3 cut(s)	891, 1191, 1575
BseSI	GKGCMC	1 cut(s)	657
BseXI	GCAGC	1 cut(s)	629
BseYI	CCCAGC	2 cut(s)	493, 970
BshFI	GGCC	3 cut(s)	528, 732, 1563
BshNI	GGYRCC	1 cut(s)	356
BshVI	ATCGAT	1 cut(s)	1404
BsiHKCI	CYCGRG	1 cut(s)	103
BsiSI	CCGG	2 cut(s)	104, 1409
BslFI	GGGAC	4 cut(s)	120, 794, 965, 1363
BslI	CCNNNNNNNGG	4 cut(s)	380, 441, 545, 1442
BsmAI	GTCTC	1 cut(s)	796
BsmFI	GGGAC	4 cut(s)	120, 794, 965, 1363
BsnI	GGCC	3 cut(s)	528, 732, 1563
Bso31I	GGTCTC	1 cut(s)	796
BsoBI	CYCGRG	1 cut(s)	103
Bsp119I	TTCGAA	2 cut(s)	946, 959
Bsp1286I	GDGCHC	2 cut(s)	657, 1530
Bsp143I	GATC	3 cut(s)	1369, 1405, 1594
Bsp19I	CCATGG	1 cut(s)	160
BspACI	CCGC	1 cut(s)	650
BspANI	GGCC	3 cut(s)	528, 732, 1563
BspCNI	CTCAG	1 cut(s)	571
BspDI	ATCGAT	1 cut(s)	1404
BspLI	GGNNCC	4 cut(s)	108, 358, 538, 1383
BspPI	GGATC	2 cut(s)	1364, 1400
BspQI	GCTCTTC	2 cut(s)	559, 1116
BspT104I	TTCGAA	2 cut(s)	946, 959
BspT107I	GGYRCC	1 cut(s)	356
BspTNI	GGTCTC	1 cut(s)	796
BsrDI	GCAATG	1 cut(s)	845
BsrI	ACTGG	5 cut(s)	191, 1198, 1205, 1430, 1444
BssECI	CCNNGG	4 cut(s)	12, 103, 160, 1477
BssMI	GATC	3 cut(s)	1369, 1405, 1594
BssT1I	CCWWGG	2 cut(s)	12, 160
Bst2UI	CCWGG	5 cut(s)	261, 534, 546, 729, 1479
Bst4CI	ACNGT	6 cut(s)	88, 139, 667, 1015, 1264, 1426
Bst6I	CTCTTC	2 cut(s)	559, 1116
BstBI	TTCGAA	2 cut(s)	946, 959
BstC8I	GCNNGC	2 cut(s)	321, 1061
BstDEI	CTNAG	2 cut(s)	338, 558
BstDSI	CCRYGG	1 cut(s)	160
BstEII	GGTNACC	1 cut(s)	151
BstF5I	GGATG	5 cut(s)	529, 811, 894, 1309, 1451
BstH2I	RGCGCY	1 cut(s)	623
BstHHI	GCGC	2 cut(s)	622, 852
BstKTI	GATC	3 cut(s)	1372, 1408, 1597
BstMAI	GTCTC	1 cut(s)	796
BstMBI	GATC	3 cut(s)	1369, 1405, 1594
BstNI	CCWGG	5 cut(s)	261, 534, 546, 729, 1479
BstNSI	RCATGY	3 cut(s)	323, 578, 1047
BstPI	GGTNACC	1 cut(s)	151
BstSCI	CCNGG	7 cut(s)	102, 103, 259, 532, 544, 727, 1477
BstSFI	CTRYAG	3 cut(s)	741, 1104, 1129
BstSLI	GKGCMC	1 cut(s)	657
BstV1I	GCAGC	1 cut(s)	629
BstXI	CCANNNNNNTGG	3 cut(s)	191, 1325, 1485
Bsu15I	ATCGAT	1 cut(s)	1404
BsuRI	GGCC	3 cut(s)	528, 732, 1563
BsuTUI	ATCGAT	1 cut(s)	1404
BtgI	CCRYGG	1 cut(s)	160
BtsCI	GGATG	5 cut(s)	529, 811, 894, 1309, 1451
BtsI	GCAGTG	1 cut(s)	1284
BtsIMutI	CAGTG	6 cut(s)	93, 184, 1191, 1284, 1431, 1437
Cac8I	GCNNGC	2 cut(s)	321, 1061
CfoI	GCGC	2 cut(s)	622, 852
Cfr13I	GGNCC	5 cut(s)	107, 227, 536, 1381, 1562
Cfr9I	CCCGGG	1 cut(s)	103
ClaI	ATCGAT	1 cut(s)	1404
Csp6I	GTAC	4 cut(s)	778, 1197, 1230, 1252
CviQI	GTAC	4 cut(s)	778, 1197, 1230, 1252
DdeI	CTNAG	2 cut(s)	338, 558
DpnI	GATC	3 cut(s)	1371, 1407, 1596
DpnII	GATC	3 cut(s)	1369, 1405, 1594
EaeI	YGGCCR	1 cut(s)	526
Eam1104I	CTCTTC	2 cut(s)	559, 1116
EarI	CTCTTC	2 cut(s)	559, 1116
Eco130I	CCWWGG	2 cut(s)	12, 160
Eco24I	GRGCYC	1 cut(s)	1530
Eco31I	GGTCTC	1 cut(s)	796
Eco47I	GGWCC	4 cut(s)	107, 227, 536, 1381
Eco47III	AGCGCT	1 cut(s)	621
Eco57I	CTGAAG	1 cut(s)	16
Eco88I	CYCGRG	1 cut(s)	103
Eco91I	GGTNACC	1 cut(s)	151
EcoO109I	RGGNCCY	2 cut(s)	536, 1381
EcoO65I	GGTNACC	1 cut(s)	151
EcoRII	CCWGG	5 cut(s)	259, 532, 544, 727, 1477
EcoT14I	CCWWGG	2 cut(s)	12, 160
EcoT22I	ATGCAT	1 cut(s)	1497
EcoT38I	GRGCYC	1 cut(s)	1530
ErhI	CCWWGG	2 cut(s)	12, 160
FaqI	GGGAC	4 cut(s)	120, 794, 965, 1363
FauI	CCCGC	1 cut(s)	643
FblI	GTMKAC	1 cut(s)	1146
Fnu4HI	GCNGC	1 cut(s)	618
FokI	GGATG	5 cut(s)	516, 818, 881, 1296, 1458
FriOI	GRGCYC	1 cut(s)	1530
Fsp4HI	GCNGC	1 cut(s)	618
FspBI	CTAG	3 cut(s)	380, 1064, 1609
GlaI	GCGC	2 cut(s)	621, 851
GluI	GCNGC	1 cut(s)	618
GsaI	CCCAGC	2 cut(s)	497, 974
GsuI	CTGGAG	1 cut(s)	1188
HaeII	RGCGCY	1 cut(s)	623
HaeIII	GGCC	3 cut(s)	528, 732, 1563
HapII	CCGG	2 cut(s)	104, 1409
HhaI	GCGC	2 cut(s)	622, 852
Hin6I	GCGC	2 cut(s)	620, 850
HinP1I	GCGC	2 cut(s)	620, 850
HincII	GTYRAC	1 cut(s)	1210
HindII	GTYRAC	1 cut(s)	1210
HindIII	AAGCTT	1 cut(s)	1119
HinfI	GANTC	6 cut(s)	8, 420, 938, 1143, 1306, 1461
HpaI	GTTAAC	1 cut(s)	1210
HpaII	CCGG	2 cut(s)	104, 1409
HphI	GGTGA	5 cut(s)	143, 163, 208, 823, 1003
Hpy166II	GTNNAC	4 cut(s)	285, 1147, 1210, 1549
Hpy188I	TCNGA	6 cut(s)	436, 451, 508, 1269, 1460, 1594
Hpy188III	TCNNGA	6 cut(s)	410, 643, 886, 1216, 1373, 1531
Hpy8I	GTNNAC	4 cut(s)	285, 1147, 1210, 1549
Hpy99I	CGWCG	1 cut(s)	1264
HpyAV	CCTTC	5 cut(s)	122, 892, 953, 1553, 1599
HpyCH4III	ACNGT	6 cut(s)	88, 139, 667, 1015, 1264, 1426
HpyCH4IV	ACGT	2 cut(s)	1212, 1391
HpyCH4V	TGCA	6 cut(s)	122, 323, 1454, 1495, 1513, 1579
HpyF3I	CTNAG	2 cut(s)	338, 558
HpySE526I	ACGT	2 cut(s)	1212, 1391
HspAI	GCGC	2 cut(s)	620, 850
KspAI	GTTAAC	1 cut(s)	1210
Kzo9I	GATC	3 cut(s)	1369, 1405, 1594
LguI	GCTCTTC	2 cut(s)	559, 1116
Lsp1109I	GCAGC	1 cut(s)	629
LweI	GCATC	5 cut(s)	499, 615, 670, 903, 1086
MaeI	CTAG	3 cut(s)	380, 1064, 1609
MaeII	ACGT	2 cut(s)	1212, 1391
MaeIII	GTNAC	4 cut(s)	131, 151, 1037, 1275
MalI	GATC	3 cut(s)	1371, 1407, 1596
MboI	GATC	3 cut(s)	1369, 1405, 1594
MboII	GAAGA	7 cut(s)	58, 546, 631, 1103, 1106, 1313, 1589
MfeI	CAATTG	1 cut(s)	813
MhlI	GDGCHC	2 cut(s)	657, 1530
MlsI	TGGCCA	1 cut(s)	528
MluNI	TGGCCA	1 cut(s)	528
MlyI	GAGTC	4 cut(s)	17, 932, 1152, 1315
Mox20I	TGGCCA	1 cut(s)	528
Mph1103I	ATGCAT	1 cut(s)	1497
MroXI	GAANNNNTTC	1 cut(s)	698
MscI	TGGCCA	1 cut(s)	528
MseI	TTAA	9 cut(s)	782, 920, 986, 1029, 1050, 1077, 1185, 1209, 1395
MslI	CAYNNNNRTG	3 cut(s)	189, 836, 1323
Msp20I	TGGCCA	1 cut(s)	528
MspI	CCGG	2 cut(s)	104, 1409
MspR9I	CCNGG	7 cut(s)	104, 105, 261, 534, 546, 729, 1479
MunI	CAATTG	1 cut(s)	813
MvaI	CCWGG	5 cut(s)	261, 534, 546, 729, 1479
NciI	CCSGG	2 cut(s)	104, 105
NcoI	CCATGG	1 cut(s)	160
NdeII	GATC	3 cut(s)	1369, 1405, 1594
NlaIV	GGNNCC	4 cut(s)	108, 358, 538, 1383
NmuCI	GTSAC	3 cut(s)	131, 151, 1037
NsiI	ATGCAT	1 cut(s)	1497
NspI	RCATGY	3 cut(s)	323, 578, 1047
NspV	TTCGAA	2 cut(s)	946, 959
PaeI	GCATGC	1 cut(s)	323
PciI	ACATGT	2 cut(s)	574, 1043
PciSI	GCTCTTC	2 cut(s)	559, 1116
PdmI	GAANNNNTTC	1 cut(s)	698
PfeI	GAWTC	2 cut(s)	420, 1461
PflMI	CCANNNNNTGG	1 cut(s)	1442
PfoI	TCCNGGA	1 cut(s)	532
PkrI	GCNGC	1 cut(s)	619
PleI	GAGTC	4 cut(s)	16, 932, 1151, 1314
PpsI	GAGTC	4 cut(s)	16, 932, 1151, 1314
PpuMI	RGGWCCY	2 cut(s)	536, 1381
PscI	ACATGT	2 cut(s)	574, 1043
PshBI	ATTAAT	1 cut(s)	1029
Psp1406I	AACGTT	1 cut(s)	1391
Psp5II	RGGWCCY	2 cut(s)	536, 1381
Psp6I	CCWGG	5 cut(s)	259, 532, 544, 727, 1477
PspEI	GGTNACC	1 cut(s)	151
PspFI	CCCAGC	2 cut(s)	493, 970
PspGI	CCWGG	5 cut(s)	259, 532, 544, 727, 1477
PspN4I	GGNNCC	4 cut(s)	108, 358, 538, 1383
PspPI	GGNCC	5 cut(s)	107, 227, 536, 1381, 1562
PspPPI	RGGWCCY	2 cut(s)	536, 1381
RsaI	GTAC	4 cut(s)	779, 1198, 1231, 1253
RsaNI	GTAC	4 cut(s)	778, 1197, 1230, 1252
RseI	CAYNNNNRTG	3 cut(s)	189, 836, 1323
SapI	GCTCTTC	2 cut(s)	559, 1116
SaqAI	TTAA	9 cut(s)	782, 920, 986, 1029, 1050, 1077, 1185, 1209, 1395
SatI	GCNGC	1 cut(s)	618
Sau3AI	GATC	3 cut(s)	1369, 1405, 1594
Sau96I	GGNCC	5 cut(s)	107, 227, 536, 1381, 1562
ScaI	AGTACT	1 cut(s)	779
SchI	GAGTC	4 cut(s)	17, 932, 1152, 1315
ScrFI	CCNGG	7 cut(s)	104, 105, 261, 534, 546, 729, 1479
SduI	GDGCHC	2 cut(s)	657, 1530
SfaNI	GCATC	5 cut(s)	499, 615, 670, 903, 1086
SfcI	CTRYAG	3 cut(s)	741, 1104, 1129
SfuI	TTCGAA	2 cut(s)	946, 959
SinI	GGWCC	4 cut(s)	107, 227, 536, 1381
SmaI	CCCGGG	1 cut(s)	105
SmiMI	CAYNNNNRTG	3 cut(s)	189, 836, 1323
SmlI	CTYRAG	2 cut(s)	408, 1529
SmoI	CTYRAG	2 cut(s)	408, 1529
SphI	GCATGC	1 cut(s)	323
SsiI	CCGC	1 cut(s)	650
SspMI	CTAG	3 cut(s)	380, 1064, 1609
StyD4I	CCNGG	7 cut(s)	102, 103, 259, 532, 544, 727, 1477
StyI	CCWWGG	2 cut(s)	12, 160
TaaI	ACNGT	6 cut(s)	88, 139, 667, 1015, 1264, 1426
TaiI	ACGT	2 cut(s)	1215, 1394
TaqI	TCGA	7 cut(s)	19, 678, 936, 946, 959, 1259, 1404
TaqII	GACCGA	1 cut(s)	778
TatI	WGTACW	1 cut(s)	777
TfiI	GAWTC	2 cut(s)	420, 1461
Tru1I	TTAA	9 cut(s)	782, 920, 986, 1029, 1050, 1077, 1185, 1209, 1395
Tru9I	TTAA	9 cut(s)	782, 920, 986, 1029, 1050, 1077, 1185, 1209, 1395
TscAI	CASTG	6 cut(s)	93, 191, 1198, 1291, 1431, 1437
TseFI	GTSAC	3 cut(s)	131, 151, 1037
TseI	GCWGC	1 cut(s)	617
Tsp45I	GTSAC	3 cut(s)	131, 151, 1037
TspDTI	ATGAA	3 cut(s)	262, 790, 1313
TspMI	CCCGGG	1 cut(s)	103
TspRI	CASTG	6 cut(s)	93, 191, 1198, 1291, 1431, 1437
Van91I	CCANNNNNTGG	1 cut(s)	1442
VpaK11BI	GGWCC	4 cut(s)	107, 227, 536, 1381
VspI	ATTAAT	1 cut(s)	1029
XapI	RAATTY	2 cut(s)	268, 1482
XceI	RCATGY	3 cut(s)	323, 578, 1047
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1223, 1443
XmaI	CCCGGG	1 cut(s)	103
XmiI	GTMKAC	1 cut(s)	1146
XmnI	GAANNNNTTC	1 cut(s)	698
XspI	CTAG	3 cut(s)	380, 1064, 1609
ZrmI	AGTACT	1 cut(s)	779
Zsp2I	ATGCAT	1 cut(s)	1497

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.