Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0005270

Physical Location & Seq

Genomic Coordinates Forward (+)

23574217 .. 23577411

Gene Structure 3195 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1147700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGTGTCGTCGATTCGATTTCTCGTGCTTTTTCTGGCATGCATTCTTCCTGCATTGGTTGAAAGCAGAGTCCGACACTACAAGTTTAATGTGGTGCTAAGAAATAGTACTAAACTATGCTCAAGTAAGCCAATTGTAACCGTTAACGGCCAGTTCCCAGGGCCAACTCTCTATGCCAGGGAAGACGATACCGTGCTTGTCAAAGTCACCAACCATGTCAAGTATAACGTTTCCATTCACTGGCATGGTATCCGGCAACTGCGAACCGGCTGGGCAGATGGTCCGGCATACATCACACAGTGCCCAATTCGACCAGGTCAAAGCTATGTGTACAACTTCACCATCACAGGGCAAAGAGGCACACTTCTTTGGCACGCACATATTCTCTGGCTAAGGGCAACTGTCCATGGTGCCCTTATAGTTTTGCCCAAGCGTGGGGTTCCTTATCCATTCCCAGCACCCCACAAGGAAGTACCTGTCGTATTAGCTGAATGGTGGAAATCGGATACTGAAGCTGTGATCAATCAAGCTCTCAAATCTGGTTTAGCACCTAATGTCTCGGATGCTCACACTATAAACGGCCATCCAGGCCCGGTTCCAAATTGTTCTTCCCAAGGCGGCTTCACATTGCCCGTGGAAAACGGCAAGACCTATCTGTTACGAATCATCAATGCTGCACTCAATGAGGAGCTCTTCTTCAAAATTGCAGGACACATTTTGACCATAGTGGAAGTAGATGCCACATATGTGAAACCCTTCAAGACGGACACCATTGTGATTGCCCCGGGACAAACCACCAATGCTCTAGTCACGGCGAATCAAAACTCCGGCAAGTACATGTTGTCAGCCTCGCCATTTATGGACTCTCCAATCGCTGTTGACAACCTCACCGCCACCGCCACTCTTCACTATACTGGCACACTTGCTACCACACCCACAACCCTCACCAGCCCACCTCCCCAAAACGCAACCCAAGTTGCTAACAGCTTCATAAACTCTCTCAAAGCCCTAAATTCCAAAAAATTTCCAGCCAAAGTCCCATTAAAAATCGATCACAATCTTCTGTTCACAGTTGGGCTTGGGATTAATTCATGCCCTAGTTGCAAAGCTGCAAACGGAAGCAGAGTAGTGGCTAGTGTTAACAATGTCACATTTGTTATGCCAACCACAGCTCTGCTTCAAGCACATTTTTTCAACAAAAGTGGGGTTTTTACCACGGATTTCCCCGGAAACCCACCGACGGCTTTCAACTTTTCTGGAGGTCTACCGGCAAATGCAAGCTTGGCAACTACAAGGGGGACAAAGCTTTATAGGCTAGCTTATAACTCAACAGTTCAACTTGTGTTGCAAGACACCGGGACTATAGCCCCTGAGAACCACCCTGTCCATTTGCATGGATTCAATTTCTTTTCAGTGGGTAGGGGAATTGGGAATTATAACCCCAAGACGGATCCTAAGAAGTTCAATCTTGTTGATCCCGTTGAAAGGAACACAGCTAATGTTCCAACCGGCGGATGGGTAGCTATCCGATTTATCGCTGATAATCCAGGGGTTTGGTTCATGCATTGCCATTTGGAAGTGCACACAACATGGGGGCTTAAGATGGCATTCTTGGTGGACAATGGCAAGGGACCTAATCAATCTCTTCTTCCTCCTCCAAAGGATCTCCCAAAATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009832 GO:0009834 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0042546 GO:0044085 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

560

Amino Acids

60.84

Weight (kDa)

9.52

Isoelectric Point (pI)

35.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	35 - 144	3.1e-41	Multicopper oxidase
Cu-oxidase	PF00394	157 - 306	7.6e-47	Multicopper oxidase
Cu-oxidase_2	PF07731	408 - 542	1.3e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005270)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38080 AT5G01190 AT5G01190
fragaria_vesca	FvH4_6g11960 FvH4_7g23980
malus_domestica	MD04G1147700.v1.1 MD07G1213300.v1.1 MD12G1161000.v1.1
prunus_persica	Prupe.2G245800_v2.0.a1 Prupe.6G271500_v2.0.a1
pyrus_communis	pycom04g13330
rosa_chinensis	RchiOBHm_Chr1g0369321 RchiOBHm_Chr3g0463771
rosa_laevigata	RLG00000024758 RLG00000027137
rosa_multiflora	Rmu_sc0001482.1_g000010 Rmu_sc0003267.1_g000044 Rmu_sc0004796.1_g000014
rosa_roxburghii	Rroxscaffold_4G00287730 Rroxscaffold_6G00416320
rosa_rugosa	Rorug01G0349600 Rorug03G0067400
rosa_samantha	Rh1BG320800 Rh1CG334800 Rh3AG124600 Rh3BG129200 Rh3DG129900
rosa_wichuraiana	Rw1G031500 Rw3G010530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1323, 1437
AccB1I	GGYRCC	1 cut(s)	410
AccB7I	CCANNNNNTGG	1 cut(s)	240
AccI	GTMKAC	1 cut(s)	1264
AciI	CCGC	4 cut(s)	618, 891, 897, 1512
AclI	AACGTT	1 cut(s)	228
AclWI	GGATC	4 cut(s)	1445, 1458, 1469, 1671
AcoI	YGGCCR	2 cut(s)	148, 580
AcsI	RAATTY	2 cut(s)	1012, 1022
AcuI	CTGAAG	1 cut(s)	531
AdeI	CACNNNGTG	1 cut(s)	300
AfaI	GTAC	4 cut(s)	109, 332, 474, 836
AfiI	CCNNNNNNNGG	9 cut(s)	240, 348, 434, 435, 1240, 1447, 1485, 1511, 1515
AflII	CTTAAG	1 cut(s)	1598
AflIII	ACRYGT	1 cut(s)	837
AjnI	CCWGG	5 cut(s)	157, 176, 313, 586, 1546
AjuI	GAANNNNNNNTTGG	2 cut(s)	592, 624
AleI	CACNNNNGTG	2 cut(s)	746, 773
Alw21I	GWGCWC	2 cut(s)	693, 1584
Alw26I	GTCTC	1 cut(s)	562
Alw44I	GTGCAC	1 cut(s)	1580
AlwI	GGATC	4 cut(s)	1445, 1458, 1469, 1671
Ama87I	CYCGRG	1 cut(s)	784
AoxI	GGCC	4 cut(s)	148, 161, 580, 589
ApaLI	GTGCAC	1 cut(s)	1580
ApeKI	GCWGC	2 cut(s)	674, 1109
ApoI	RAATTY	2 cut(s)	1012, 1022
AseI	ATTAAT	1 cut(s)	1086
Asp700I	GAANNNNTTC	1 cut(s)	755
AspS9I	GGNCC	4 cut(s)	161, 281, 590, 1631
AsuC2I	CCSGG	5 cut(s)	593, 785, 786, 1227, 1357
AsuHPI	GGTGA	4 cut(s)	199, 331, 880, 937
AsuNHI	GCTAGC	1 cut(s)	1315
AvaI	CYCGRG	1 cut(s)	784
AvaII	GGWCC	2 cut(s)	281, 1631
BaeGI	GKGCMC	3 cut(s)	305, 415, 1584
BamHI	GGATCC	1 cut(s)	1450
BanI	GGYRCC	1 cut(s)	410
BanII	GRGCYC	1 cut(s)	693
BauI	CACGAG	1 cut(s)	23
BbsI	GAAGAC	1 cut(s)	189
Bbv12I	GWGCWC	2 cut(s)	693, 1584
BbvI	GCAGC	2 cut(s)	661, 1096
BccI	CCATC	5 cut(s)	272, 350, 591, 1509, 1597
BceAI	ACGGC	5 cut(s)	163, 595, 658, 828, 1257
BciT130I	CCWGG	5 cut(s)	159, 178, 315, 588, 1548
BciVI	GTATCC	2 cut(s)	260, 499
BclI	TGATCA	1 cut(s)	519
BcnI	CCSGG	5 cut(s)	593, 785, 786, 1227, 1357
BcoDI	GTCTC	1 cut(s)	562
BfaI	CTAG	4 cut(s)	806, 1098, 1134, 1316
BfmI	CTRYAG	1 cut(s)	1362
BfrI	CTTAAG	1 cut(s)	1598
BfuI	GTATCC	2 cut(s)	260, 499
BglI	GCCNNNNNGGC	1 cut(s)	588
BisI	GCNGC	3 cut(s)	619, 675, 1110
BlsI	GCNGC	3 cut(s)	620, 676, 1111
BmcAI	AGTACT	1 cut(s)	109
Bme18I	GGWCC	2 cut(s)	281, 1631
BmeT110I	CYCGRG	1 cut(s)	784
BmgT120I	GGNCC	4 cut(s)	161, 281, 590, 1631
BmiI	GGNNCC	5 cut(s)	412, 441, 597, 1452, 1632
BmsI	GCATC	2 cut(s)	553, 727
BmtI	GCTAGC	1 cut(s)	1319
BpiI	GAAGAC	1 cut(s)	189
BpmI	CTGGAG	1 cut(s)	1278
Bpu10I	CCTNAGC	1 cut(s)	392
BpuEI	CTTGAG	1 cut(s)	106
BpuMI	CCSGG	5 cut(s)	593, 785, 786, 1227, 1357
Bsa29I	ATCGAT	1 cut(s)	1050
BsaBI	GATNNNNATC	1 cut(s)	1056
Bsc4I	CCNNNNNNNGG	9 cut(s)	240, 348, 434, 435, 1240, 1447, 1485, 1511, 1515
Bse118I	RCCGGY	3 cut(s)	266, 1267, 1508
Bse1I	ACTGG	3 cut(s)	151, 245, 919
Bse3DI	GCAATG	2 cut(s)	626, 1564
Bse8I	GATNNNNATC	1 cut(s)	1056
BseBI	CCWGG	5 cut(s)	159, 178, 315, 588, 1548
BseCI	ATCGAT	1 cut(s)	1050
BseGI	GGATG	3 cut(s)	568, 583, 1520
BseJI	GATNNNNATC	1 cut(s)	1056
BseLI	CCNNNNNNNGG	9 cut(s)	240, 348, 434, 435, 1240, 1447, 1485, 1511, 1515
BseMI	GCAATG	2 cut(s)	626, 1564
BseMII	CTCAG	1 cut(s)	1362
BseNI	ACTGG	3 cut(s)	151, 245, 919
BseRI	GAGGAG	2 cut(s)	701, 1644
BseSI	GKGCMC	3 cut(s)	305, 415, 1584
BseXI	GCAGC	2 cut(s)	661, 1096
BseYI	CCCAGC	2 cut(s)	270, 454
BsgI	GTGCAG	1 cut(s)	660
BshFI	GGCC	4 cut(s)	150, 163, 582, 591
BshNI	GGYRCC	1 cut(s)	410
BshVI	ATCGAT	1 cut(s)	1050
BsiHKAI	GWGCWC	2 cut(s)	693, 1584
BsiHKCI	CYCGRG	1 cut(s)	784
BslFI	GGGAC	5 cut(s)	801, 1022, 1312, 1372, 1644
BslI	CCNNNNNNNGG	9 cut(s)	240, 348, 434, 435, 1240, 1447, 1485, 1511, 1515
BsmAI	GTCTC	1 cut(s)	562
BsmFI	GGGAC	5 cut(s)	801, 1022, 1312, 1372, 1644
BsmI	GAATGC	2 cut(s)	42, 1607
BsnI	GGCC	4 cut(s)	150, 163, 582, 591
BsoBI	CYCGRG	1 cut(s)	784
Bsp1286I	GDGCHC	4 cut(s)	305, 415, 693, 1584
Bsp1407I	TGTACA	1 cut(s)	330
Bsp143I	GATC	5 cut(s)	519, 1051, 1450, 1474, 1663
Bsp19I	CCATGG	1 cut(s)	406
BspACI	CCGC	4 cut(s)	618, 891, 897, 1512
BspANI	GGCC	4 cut(s)	150, 163, 582, 591
BspCNI	CTCAG	1 cut(s)	1363
BspDI	ATCGAT	1 cut(s)	1050
BspLI	GGNNCC	5 cut(s)	412, 441, 597, 1452, 1632
BspOI	GCTAGC	1 cut(s)	1319
BspPI	GGATC	4 cut(s)	1445, 1458, 1469, 1671
BspQI	GCTCTTC	1 cut(s)	698
BspT107I	GGYRCC	1 cut(s)	410
BspTI	CTTAAG	1 cut(s)	1598
BsrDI	GCAATG	2 cut(s)	626, 1564
BsrFI	RCCGGY	3 cut(s)	266, 1267, 1508
BsrGI	TGTACA	1 cut(s)	330
BsrI	ACTGG	3 cut(s)	151, 245, 919
BssAI	RCCGGY	3 cut(s)	266, 1267, 1508
BssMI	GATC	5 cut(s)	519, 1051, 1450, 1474, 1663
BssSI	CACGAG	1 cut(s)	23
BssT1I	CCWWGG	2 cut(s)	406, 613
Bst2BI	CACGAG	1 cut(s)	23
Bst2UI	CCWGG	5 cut(s)	159, 178, 315, 588, 1548
Bst4CI	ACNGT	6 cut(s)	142, 193, 300, 403, 1072, 1333
Bst6I	CTCTTC	3 cut(s)	698, 909, 1650
BstAFI	CTTAAG	1 cut(s)	1598
BstAUI	TGTACA	1 cut(s)	330
BstC8I	GCNNGC	4 cut(s)	40, 375, 1279, 1317
BstDEI	CTNAG	4 cut(s)	98, 392, 1371, 1455
BstDSI	CCRYGG	3 cut(s)	406, 633, 1215
BstF5I	GGATG	3 cut(s)	568, 583, 1520
BstKTI	GATC	5 cut(s)	522, 1054, 1453, 1477, 1666
BstMAI	GTCTC	1 cut(s)	562
BstMBI	GATC	5 cut(s)	519, 1051, 1450, 1474, 1663
BstMWI	GCNNNNNNNGC	4 cut(s)	588, 1101, 1283, 1312
BstNI	CCWGG	5 cut(s)	159, 178, 315, 588, 1548
BstNSI	RCATGY	2 cut(s)	42, 841
BstSFI	CTRYAG	1 cut(s)	1362
BstSLI	GKGCMC	3 cut(s)	305, 415, 1584
BstV1I	GCAGC	2 cut(s)	661, 1096
BstV2I	GAAGAC	1 cut(s)	189
BstX2I	RGATCY	2 cut(s)	1450, 1663
BstXI	CCANNNNNNTGG	2 cut(s)	1394, 1554
BstYI	RGATCY	2 cut(s)	1450, 1663
Bsu15I	ATCGAT	1 cut(s)	1050
BsuI	GTATCC	2 cut(s)	260, 499
BsuRI	GGCC	4 cut(s)	150, 163, 582, 591
BsuTUI	ATCGAT	1 cut(s)	1050
BtgI	CCRYGG	3 cut(s)	406, 633, 1215
BtsCI	GGATG	3 cut(s)	568, 583, 1520
BtsIMutI	CAGTG	3 cut(s)	238, 305, 1419
Cac8I	GCNNGC	4 cut(s)	40, 375, 1279, 1317
Cfr10I	RCCGGY	3 cut(s)	266, 1267, 1508
Cfr13I	GGNCC	4 cut(s)	161, 281, 590, 1631
Cfr9I	CCCGGG	1 cut(s)	784
ClaI	ATCGAT	1 cut(s)	1050
CsiI	ACCWGGT	1 cut(s)	313
Csp6I	GTAC	4 cut(s)	108, 331, 473, 835
CspCI	CAANNNNNGTGG	2 cut(s)	1183, 1218
CviAII	CATG	9 cut(s)	39, 215, 245, 407, 838, 1092, 1394, 1561, 1590
CviQI	GTAC	4 cut(s)	108, 331, 473, 835
DdeI	CTNAG	4 cut(s)	98, 392, 1371, 1455
DpnI	GATC	5 cut(s)	521, 1053, 1452, 1476, 1665
DpnII	GATC	5 cut(s)	519, 1051, 1450, 1474, 1663
DraIII	CACNNNGTG	1 cut(s)	300
EaeI	YGGCCR	2 cut(s)	148, 580
Eam1104I	CTCTTC	3 cut(s)	698, 909, 1650
EarI	CTCTTC	3 cut(s)	698, 909, 1650
EciI	GGCGGA	1 cut(s)	1527
Ecl136II	GAGCTC	1 cut(s)	691
Eco130I	CCWWGG	2 cut(s)	406, 613
Eco24I	GRGCYC	1 cut(s)	693
Eco47I	GGWCC	2 cut(s)	281, 1631
Eco53kI	GAGCTC	1 cut(s)	691
Eco57I	CTGAAG	1 cut(s)	531
Eco88I	CYCGRG	1 cut(s)	784
EcoICRI	GAGCTC	1 cut(s)	691
EcoO109I	RGGNCCY	1 cut(s)	1631
EcoRII	CCWGG	5 cut(s)	157, 176, 313, 586, 1546
EcoT14I	CCWWGG	2 cut(s)	406, 613
EcoT22I	ATGCAT	2 cut(s)	44, 1566
EcoT38I	GRGCYC	1 cut(s)	693
ErhI	CCWWGG	2 cut(s)	406, 613
FaeI	CATG	9 cut(s)	42, 218, 248, 410, 841, 1095, 1397, 1564, 1593
FaqI	GGGAC	5 cut(s)	801, 1022, 1312, 1372, 1644
FatI	CATG	9 cut(s)	38, 214, 244, 406, 837, 1091, 1393, 1560, 1589
FauNDI	CATATG	1 cut(s)	745
FbaI	TGATCA	1 cut(s)	519
FblI	GTMKAC	1 cut(s)	1264
Fnu4HI	GCNGC	3 cut(s)	619, 675, 1110
FokI	GGATG	3 cut(s)	570, 575, 1527
FriOI	GRGCYC	1 cut(s)	693
Fsp4HI	GCNGC	3 cut(s)	619, 675, 1110
FspBI	CTAG	4 cut(s)	806, 1098, 1134, 1316
GluI	GCNGC	3 cut(s)	619, 675, 1110
GsaI	CCCAGC	2 cut(s)	274, 458
GsuI	CTGGAG	1 cut(s)	1278
HaeIII	GGCC	4 cut(s)	150, 163, 582, 591
Hin1II	CATG	9 cut(s)	42, 218, 248, 410, 841, 1095, 1397, 1564, 1593
HincII	GTYRAC	3 cut(s)	145, 880, 1141
HindII	GTYRAC	3 cut(s)	145, 880, 1141
HindIII	AAGCTT	2 cut(s)	1279, 1304
HinfI	GANTC	6 cut(s)	13, 69, 663, 817, 863, 1398
HpaI	GTTAAC	2 cut(s)	145, 1141
HphI	GGTGA	4 cut(s)	199, 331, 880, 937
Hpy166II	GTNNAC	8 cut(s)	145, 331, 880, 1068, 1141, 1265, 1582, 1618
Hpy188I	TCNGA	4 cut(s)	74, 505, 562, 1529
Hpy188III	TCNNGA	2 cut(s)	760, 1257
Hpy8I	GTNNAC	8 cut(s)	145, 331, 880, 1068, 1141, 1265, 1582, 1618
Hpy99I	CGWCG	2 cut(s)	13, 1243
HpyAV	CCTTC	1 cut(s)	766
HpyCH4III	ACNGT	6 cut(s)	142, 193, 300, 403, 1072, 1333
HpyCH4IV	ACGT	1 cut(s)	228
HpyF10VI	GCNNNNNNNGC	4 cut(s)	588, 1101, 1283, 1312
HpyF3I	CTNAG	4 cut(s)	98, 392, 1371, 1455
HpySE526I	ACGT	1 cut(s)	228
Hsp92II	CATG	9 cut(s)	42, 218, 248, 410, 841, 1095, 1397, 1564, 1593
Ksp22I	TGATCA	1 cut(s)	519
KspAI	GTTAAC	2 cut(s)	145, 1141
Kzo9I	GATC	5 cut(s)	519, 1051, 1450, 1474, 1663
LguI	GCTCTTC	1 cut(s)	698
LmnI	GCTCC	1 cut(s)	688
Lsp1109I	GCAGC	2 cut(s)	661, 1096
LweI	GCATC	2 cut(s)	553, 727
MabI	ACCWGGT	1 cut(s)	313
MaeI	CTAG	4 cut(s)	806, 1098, 1134, 1316
MaeII	ACGT	1 cut(s)	228
MaeIII	GTNAC	5 cut(s)	136, 205, 657, 808, 1147
MalI	GATC	5 cut(s)	521, 1053, 1452, 1476, 1665
MboI	GATC	5 cut(s)	519, 1051, 1450, 1474, 1663
MboII	GAAGA	9 cut(s)	38, 194, 600, 685, 688, 896, 1052, 1637, 1640
MfeI	CAATTG	1 cut(s)	132
MflI	RGATCY	2 cut(s)	1450, 1663
MhlI	GDGCHC	4 cut(s)	305, 415, 693, 1584
MlyI	GAGTC	2 cut(s)	78, 857
MmeI	TCCRAC	2 cut(s)	97, 1529
MnlI	CCTC	9 cut(s)	350, 679, 859, 896, 953, 966, 1253, 1662, 1665
Mph1103I	ATGCAT	2 cut(s)	44, 1566
MroXI	GAANNNNTTC	1 cut(s)	755
MseI	TTAA	7 cut(s)	87, 144, 1043, 1086, 1140, 1599, 1678
MslI	CAYNNNNRTG	4 cut(s)	243, 746, 773, 1392
MspCI	CTTAAG	1 cut(s)	1598
MunI	CAATTG	1 cut(s)	132
Mva1269I	GAATGC	2 cut(s)	42, 1607
MvaI	CCWGG	5 cut(s)	159, 178, 315, 588, 1548
MwoI	GCNNNNNNNGC	4 cut(s)	588, 1101, 1283, 1312
NciI	CCSGG	5 cut(s)	593, 785, 786, 1227, 1357
NcoI	CCATGG	1 cut(s)	406
NdeI	CATATG	1 cut(s)	745
NdeII	GATC	5 cut(s)	519, 1051, 1450, 1474, 1663
NheI	GCTAGC	1 cut(s)	1315
NlaIII	CATG	9 cut(s)	42, 218, 248, 410, 841, 1095, 1397, 1564, 1593
NlaIV	GGNNCC	5 cut(s)	412, 441, 597, 1452, 1632
NmuCI	GTSAC	3 cut(s)	205, 808, 1147
NsiI	ATGCAT	2 cut(s)	44, 1566
NspI	RCATGY	2 cut(s)	42, 841
OliI	CACNNNNGTG	2 cut(s)	746, 773
PaeI	GCATGC	1 cut(s)	42
PasI	CCCWGGG	1 cut(s)	158
PciI	ACATGT	1 cut(s)	837
PciSI	GCTCTTC	1 cut(s)	698
PctI	GAATGC	2 cut(s)	42, 1607
PdmI	GAANNNNTTC	1 cut(s)	755
PfeI	GAWTC	4 cut(s)	13, 663, 817, 1398
PflFI	GACNNNGTC	1 cut(s)	315
PflMI	CCANNNNNTGG	1 cut(s)	240
PkrI	GCNGC	3 cut(s)	620, 676, 1111
PleI	GAGTC	2 cut(s)	77, 857
PpsI	GAGTC	2 cut(s)	77, 857
PpuMI	RGGWCCY	1 cut(s)	1631
PscI	ACATGT	1 cut(s)	837
PshBI	ATTAAT	1 cut(s)	1086
PsiI	TTATAA	2 cut(s)	1323, 1437
Psp124BI	GAGCTC	1 cut(s)	693
Psp1406I	AACGTT	1 cut(s)	228
Psp5II	RGGWCCY	1 cut(s)	1631
Psp6I	CCWGG	5 cut(s)	157, 176, 313, 586, 1546
PspFI	CCCAGC	2 cut(s)	270, 454
PspGI	CCWGG	5 cut(s)	157, 176, 313, 586, 1546
PspN4I	GGNNCC	5 cut(s)	412, 441, 597, 1452, 1632
PspPI	GGNCC	4 cut(s)	161, 281, 590, 1631
PspPPI	RGGWCCY	1 cut(s)	1631
PsuI	RGATCY	2 cut(s)	1450, 1663
PsyI	GACNNNGTC	1 cut(s)	315
RsaI	GTAC	4 cut(s)	109, 332, 474, 836
RsaNI	GTAC	4 cut(s)	108, 331, 473, 835
RseI	CAYNNNNRTG	4 cut(s)	243, 746, 773, 1392
SacI	GAGCTC	1 cut(s)	693
SapI	GCTCTTC	1 cut(s)	698
SaqAI	TTAA	7 cut(s)	87, 144, 1043, 1086, 1140, 1599, 1678
SatI	GCNGC	3 cut(s)	619, 675, 1110
Sau3AI	GATC	5 cut(s)	519, 1051, 1450, 1474, 1663
Sau96I	GGNCC	4 cut(s)	161, 281, 590, 1631
ScaI	AGTACT	1 cut(s)	109
SchI	GAGTC	2 cut(s)	78, 857
SduI	GDGCHC	4 cut(s)	305, 415, 693, 1584
SexAI	ACCWGGT	1 cut(s)	313
SfaNI	GCATC	2 cut(s)	553, 727
SfcI	CTRYAG	1 cut(s)	1362
SfiI	GGCCNNNNNGGCC	1 cut(s)	588
SinI	GGWCC	2 cut(s)	281, 1631
SmaI	CCCGGG	1 cut(s)	786
SmiMI	CAYNNNNRTG	4 cut(s)	243, 746, 773, 1392
SmlI	CTYRAG	2 cut(s)	121, 1598
SmoI	CTYRAG	2 cut(s)	121, 1598
SphI	GCATGC	1 cut(s)	42
SsiI	CCGC	4 cut(s)	618, 891, 897, 1512
SspMI	CTAG	4 cut(s)	806, 1098, 1134, 1316
SstI	GAGCTC	1 cut(s)	693
StyI	CCWWGG	2 cut(s)	406, 613
TaaI	ACNGT	6 cut(s)	142, 193, 300, 403, 1072, 1333
TaiI	ACGT	1 cut(s)	231
TaqI	TCGA	4 cut(s)	11, 16, 310, 1050
TatI	WGTACW	3 cut(s)	107, 330, 834
TauI	GCSGC	1 cut(s)	621
TfiI	GAWTC	4 cut(s)	13, 663, 817, 1398
Tru1I	TTAA	7 cut(s)	87, 144, 1043, 1086, 1140, 1599, 1678
Tru9I	TTAA	7 cut(s)	87, 144, 1043, 1086, 1140, 1599, 1678
TscAI	CASTG	3 cut(s)	245, 305, 1419
TseFI	GTSAC	3 cut(s)	205, 808, 1147
TseI	GCWGC	2 cut(s)	674, 1109
Tsp45I	GTSAC	3 cut(s)	205, 808, 1147
TspDTI	ATGAA	3 cut(s)	979, 1080, 1549
TspGWI	ACGGA	4 cut(s)	779, 1131, 1232, 1463
TspMI	CCCGGG	1 cut(s)	784
TspRI	CASTG	3 cut(s)	245, 305, 1419
Tth111I	GACNNNGTC	1 cut(s)	315
Van91I	CCANNNNNTGG	1 cut(s)	240
Vha464I	CTTAAG	1 cut(s)	1598
VneI	GTGCAC	1 cut(s)	1580
VpaK11BI	GGWCC	2 cut(s)	281, 1631
VspI	ATTAAT	1 cut(s)	1086
XapI	RAATTY	2 cut(s)	1012, 1022
XceI	RCATGY	2 cut(s)	42, 841
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1512
XmaI	CCCGGG	1 cut(s)	784
XmiI	GTMKAC	1 cut(s)	1264
XmnI	GAANNNNTTC	1 cut(s)	755
XspI	CTAG	4 cut(s)	806, 1098, 1134, 1316
ZrmI	AGTACT	1 cut(s)	109
Zsp2I	ATGCAT	2 cut(s)	44, 1566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.