Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0005270

Physical Location & Seq

Genomic Coordinates Reverse (-)

7170306 .. 7173452

Gene Structure 3147 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g11960.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGCTTCGTGGATTCGAGTTCTTCTACTTCTTCTGGCTTGCCTTCTTCCGGCTTTGGTTGAGAGCAGGGTTCGTAACTACAAGTTTAATGTGGTGCTGAGAAACACTACCAGACTATGCTCCACCAAGCCAATTGTAACCATCAACGGTCGTTTTCCAGGGCCAACTCTCTATGCCAGGGAAGACGACACCGTTCTTGTGAAAGTCACCAACCATGTCACGTACAACGTTTCCATTCACTGGCATGGTATCCGGCAAATCCGGACCGGTTGGTCAGATGGACCAGCATACATCACACAGTGCCCTATTCCTCAAGGCCAAAGCTTTACATACAACTTCACCATCACAGGCCAGAGAGGCACACTTCTTTGGCATGCACATATTCTCTGGCTAAGAGCCACAGTCCATGGTGCTCTTGTCATTCTGCCCAAGCGTGGTGTGCCTTATCCTTTCCCAACACCCCACAAGGAAGTTCCAGTTGTGTTAGCTGAATGGTGGAAATCAGATACTGAAGCAGTGATCAATGAAGCTCTCAAAGGTGGTTTAGCACCTAACGTGTCAGATGCTCACACTATTAACGGTCATCCTGGCTTGGTCTCTCCAAATTGTACCACAGATGGCGGCTTCAAGTTGTCTGTGGAAAGCGGCAAGACCTACTTGCTCCGCATCATCAATGCTGCGCTCAATGAAGAGCTCTTCTTCAAAATCGCCGGACATAAGTTGACGATAGTGGAAGTCGACGCCACCTATGTAAAACCCTTCAAAACTGACACCATAGTGATCGCCCCTGGACAAACCACGAATGCTCTCATCACTGCAAACCAAAAGTCCGGCAAGTACTTGGTTACCGCCTCCCCATTCTTAGACACTCCCGGTATCGCCGTAGACAACCTGACGTCCACTGCCACTGTGCACTATTCAGGCACACTTTCTAACTCACCCACAACTCTCACGAGCCCACCTCCTCAAAATGCTACCCAAGTCGCCAACAGTTTTACCGACTCTCTCAGAAGCCTGAACACAATGAAGTTTCCTGCCAAAGTCCCCTTAAAGATTGATCACAACCTTCTGTTCACAATTGGGTTAGGGATTAACCCATGCCCTAGTTGCAAAGCTGGTAATGGAAGCCGTGTGGTGGCCAGTATTAACAATGTCACATTTGTTATGCCAACCACAGCTCTGCTTCAAGCACATTTCTTCAAAACCAAAGGGGTTTTCACCACTGATTTTCCAGCTAACCCACCAAATGCTTTCAACTTTTCTGGAGGCCTCCCAGCAAATTCTAGTCTGGCGACTACAAATGGGACAAAGGTTTATAGGTTGGCTTATAACTCTACTGTTCAACTTGTGCTGCAAGACACTGGAATTATAGCCCCTGAGAACCACCCAGTACATCTGCATGGCTTCAATTTCTTTGCGATTGGCAGGGGACTTGGCAATTACAACCCCAAGACCGATCCTAAGAACTTCAATCTTGTTGATCCTGTTGAAAGGAACACAATTGGTGTTCCATCTGGTGGTTGGGTAGCAATCCGATTTATCGCAGATAATCCTGGTGTTTGGTTTATGCATTGTCATTTGGAAGTGCACACATCATGGGGGCTTAAGATGGCATTTTTGGTGGACAATGGGAAAGGACCTAATCAATCACTTCTACCTCCTCCAAAGGATCTTCCGACCTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009832 GO:0009834 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0042546 GO:0044085 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

562

Amino Acids

61.07

Weight (kDa)

9.36

Isoelectric Point (pI)

32.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	35 - 144	1.9e-40	Multicopper oxidase
Cu-oxidase	PF00394	157 - 308	3.5e-45	Multicopper oxidase
Cu-oxidase_2	PF07731	410 - 544	3.6e-42	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005270)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38080 AT5G01190 AT5G01190
fragaria_vesca	FvH4_6g11960 FvH4_7g23980
malus_domestica	MD04G1147700.v1.1 MD07G1213300.v1.1 MD12G1161000.v1.1
prunus_persica	Prupe.2G245800_v2.0.a1 Prupe.6G271500_v2.0.a1
pyrus_communis	pycom04g13330
rosa_chinensis	RchiOBHm_Chr1g0369321 RchiOBHm_Chr3g0463771
rosa_laevigata	RLG00000024758 RLG00000027137
rosa_multiflora	Rmu_sc0001482.1_g000010 Rmu_sc0003267.1_g000044 Rmu_sc0004796.1_g000014
rosa_roxburghii	Rroxscaffold_4G00287730 Rroxscaffold_6G00416320
rosa_rugosa	Rorug01G0349600 Rorug03G0067400
rosa_samantha	Rh1BG320800 Rh1CG334800 Rh3AG124600 Rh3BG129200 Rh3DG129900
rosa_wichuraiana	Rw1G031500 Rw3G010530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1329
AasI	GACNNNNNNGTC	1 cut(s)	271
AatII	GACGTC	1 cut(s)	899
AccB7I	CCANNNNNTGG	2 cut(s)	240, 1517
AccI	GTMKAC	2 cut(s)	738, 885
AccIII	TCCGGA	1 cut(s)	261
AciI	CCGC	4 cut(s)	621, 645, 664, 849
AclI	AACGTT	1 cut(s)	228
AclWI	GGATC	3 cut(s)	1451, 1475, 1677
AcoI	YGGCCR	1 cut(s)	1137
AcsI	RAATTY	1 cut(s)	1279
AcuI	CTGAAG	1 cut(s)	531
AcyI	GRCGYC	2 cut(s)	741, 896
AdeI	CACNNNGTG	1 cut(s)	300
AfaI	GTAC	4 cut(s)	224, 610, 839, 1392
AfiI	CCNNNNNNNGG	5 cut(s)	49, 240, 434, 1135, 1517
AflII	CTTAAG	1 cut(s)	1604
AflIII	ACRYGT	1 cut(s)	555
AgeI	ACCGGT	1 cut(s)	266
AjnI	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
AjuI	GAANNNNNNNTTGG	2 cut(s)	1199, 1231
AleI	CACNNNNGTG	1 cut(s)	776
AluBI	AGCT	7 cut(s)	324, 488, 530, 694, 1115, 1178, 1235
AluI	AGCT	7 cut(s)	324, 488, 530, 694, 1115, 1178, 1235
Alw21I	GWGCWC	4 cut(s)	415, 696, 915, 1590
Alw26I	GTCTC	1 cut(s)	601
Alw44I	GTGCAC	2 cut(s)	911, 1586
AlwI	GGATC	3 cut(s)	1451, 1475, 1677
AlwNI	CAGNNNCTG	1 cut(s)	509
Aor13HI	TCCGGA	1 cut(s)	261
AoxI	GGCC	5 cut(s)	161, 316, 349, 1137, 1267
ApaLI	GTGCAC	2 cut(s)	911, 1586
ApeKI	GCWGC	2 cut(s)	677, 1351
ApoI	RAATTY	1 cut(s)	1279
ArsI	GACNNNNNNTTYG	2 cut(s)	812, 844
AsiGI	ACCGGT	1 cut(s)	266
AspLEI	GCGC	1 cut(s)	682
AspS9I	GGNCC	4 cut(s)	161, 264, 281, 1637
AsuC2I	CCSGG	1 cut(s)	873
AsuHPI	GGTGA	4 cut(s)	199, 331, 930, 1210
AvaII	GGWCC	3 cut(s)	264, 281, 1637
BaeGI	GKGCMC	3 cut(s)	305, 915, 1590
BalI	TGGCCA	1 cut(s)	1139
BanII	GRGCYC	2 cut(s)	696, 959
BauI	CACGAG	1 cut(s)	952
BbsI	GAAGAC	1 cut(s)	189
Bbv12I	GWGCWC	4 cut(s)	415, 696, 915, 1590
BbvI	GCAGC	2 cut(s)	664, 1338
BccI	CCATC	6 cut(s)	149, 272, 350, 611, 1519, 1603
BceAI	ACGGC	2 cut(s)	866, 1113
BciT130I	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
BciVI	GTATCC	1 cut(s)	260
BclI	TGATCA	2 cut(s)	519, 1057
BcnI	CCSGG	1 cut(s)	873
BcoDI	GTCTC	1 cut(s)	601
BfaI	CTAG	2 cut(s)	1104, 1284
BfrI	CTTAAG	1 cut(s)	1604
BfuI	GTATCC	1 cut(s)	260
BglI	GCCNNNNNGGC	1 cut(s)	357
BisI	GCNGC	4 cut(s)	622, 646, 678, 1352
BlsI	GCNGC	4 cut(s)	623, 647, 679, 1353
BmcAI	AGTACT	1 cut(s)	839
Bme1390I	CCNGG	6 cut(s)	159, 178, 588, 789, 873, 1554
Bme18I	GGWCC	3 cut(s)	264, 281, 1637
BmgT120I	GGNCC	4 cut(s)	161, 264, 281, 1637
BmrFI	CCNGG	6 cut(s)	159, 178, 588, 789, 873, 1554
BmrI	ACTGGG	1 cut(s)	1382
BmsI	GCATC	2 cut(s)	553, 675
BmuI	ACTGGG	1 cut(s)	1382
BpiI	GAAGAC	1 cut(s)	189
BplI	GAGNNNNNCTC	2 cut(s)	946, 978
BpmI	CTGGAG	1 cut(s)	1284
BpuEI	CTTGAG	1 cut(s)	297
BpuMI	CCSGG	1 cut(s)	873
BsaAI	YACGTR	1 cut(s)	222
BsaHI	GRCGYC	2 cut(s)	741, 896
BsaI	GGTCTC	1 cut(s)	601
BsaJI	CCNNGG	4 cut(s)	158, 177, 406, 787
BsaWI	WCCGGW	2 cut(s)	261, 266
Bsc4I	CCNNNNNNNGG	5 cut(s)	49, 240, 434, 1135, 1517
Bse118I	RCCGGY	1 cut(s)	266
Bse1I	ACTGG	5 cut(s)	245, 476, 1140, 1366, 1388
BseAI	TCCGGA	1 cut(s)	261
BseBI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
BseDI	CCNNGG	4 cut(s)	158, 177, 406, 787
BseGI	GGATG	1 cut(s)	583
BseLI	CCNNNNNNNGG	5 cut(s)	49, 240, 434, 1135, 1517
BseMII	CTCAG	3 cut(s)	89, 1021, 1368
BseNI	ACTGG	5 cut(s)	245, 476, 1140, 1366, 1388
BseRI	GAGGAG	2 cut(s)	954, 1650
BseSI	GKGCMC	3 cut(s)	305, 915, 1590
BseXI	GCAGC	2 cut(s)	664, 1338
BseYI	CCCAGC	1 cut(s)	1273
Bsh1285I	CGRYCG	1 cut(s)	151
BshFI	GGCC	5 cut(s)	163, 318, 351, 1139, 1269
BshTI	ACCGGT	1 cut(s)	266
BsiEI	CGRYCG	1 cut(s)	151
BsiHKAI	GWGCWC	4 cut(s)	415, 696, 915, 1590
BsiSI	CCGG	7 cut(s)	50, 253, 262, 267, 711, 831, 873
BslFI	GGGAC	3 cut(s)	1028, 1318, 1443
BslI	CCNNNNNNNGG	5 cut(s)	49, 240, 434, 1135, 1517
BsmAI	GTCTC	1 cut(s)	601
BsmFI	GGGAC	3 cut(s)	1028, 1318, 1443
BsmI	GAATGC	1 cut(s)	808
BsnI	GGCC	5 cut(s)	163, 318, 351, 1139, 1269
Bso31I	GGTCTC	1 cut(s)	601
Bsp1286I	GDGCHC	6 cut(s)	305, 415, 696, 915, 959, 1590
Bsp13I	TCCGGA	1 cut(s)	261
Bsp143I	GATC	6 cut(s)	519, 780, 1057, 1456, 1480, 1669
Bsp19I	CCATGG	1 cut(s)	406
BspACI	CCGC	4 cut(s)	621, 645, 664, 849
BspANI	GGCC	5 cut(s)	163, 318, 351, 1139, 1269
BspCNI	CTCAG	3 cut(s)	90, 1020, 1369
BspEI	TCCGGA	1 cut(s)	261
BspPI	GGATC	3 cut(s)	1451, 1475, 1677
BspQI	GCTCTTC	2 cut(s)	684, 701
BspTI	CTTAAG	1 cut(s)	1604
BspTNI	GGTCTC	1 cut(s)	601
BsrFI	RCCGGY	1 cut(s)	266
BsrI	ACTGG	5 cut(s)	245, 476, 1140, 1366, 1388
BssAI	RCCGGY	1 cut(s)	266
BssECI	CCNNGG	4 cut(s)	158, 177, 406, 787
BssMI	GATC	6 cut(s)	519, 780, 1057, 1456, 1480, 1669
BssNI	GRCGYC	2 cut(s)	741, 896
BssSI	CACGAG	1 cut(s)	952
BssT1I	CCWWGG	1 cut(s)	406
Bst2BI	CACGAG	1 cut(s)	952
Bst2UI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
Bst4CI	ACNGT	8 cut(s)	149, 193, 300, 403, 581, 910, 992, 1339
Bst6I	CTCTTC	2 cut(s)	684, 701
BstACI	GRCGYC	2 cut(s)	741, 896
BstAFI	CTTAAG	1 cut(s)	1604
BstBAI	YACGTR	1 cut(s)	222
BstC8I	GCNNGC	2 cut(s)	40, 375
BstDEI	CTNAG	6 cut(s)	98, 392, 862, 1007, 1377, 1461
BstDSI	CCRYGG	1 cut(s)	406
BstEII	GGTNACC	1 cut(s)	844
BstF5I	GGATG	1 cut(s)	583
BstHHI	GCGC	1 cut(s)	682
BstKTI	GATC	6 cut(s)	522, 783, 1060, 1459, 1483, 1672
BstMAI	GTCTC	1 cut(s)	601
BstMBI	GATC	6 cut(s)	519, 780, 1057, 1456, 1480, 1669
BstMCI	CGRYCG	1 cut(s)	151
BstMWI	GCNNNNNNNGC	3 cut(s)	357, 439, 1107
BstNI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
BstNSI	RCATGY	1 cut(s)	377
BstPI	GGTNACC	1 cut(s)	844
BstSCI	CCNGG	6 cut(s)	157, 176, 586, 787, 871, 1552
BstSLI	GKGCMC	3 cut(s)	305, 915, 1590
BstV1I	GCAGC	2 cut(s)	664, 1338
BstV2I	GAAGAC	1 cut(s)	189
BstX2I	RGATCY	1 cut(s)	1669
BstYI	RGATCY	1 cut(s)	1669
BsuI	GTATCC	1 cut(s)	260
BsuRI	GGCC	5 cut(s)	163, 318, 351, 1139, 1269
BtgI	CCRYGG	1 cut(s)	406
BtsCI	GGATG	1 cut(s)	583
BtsI	GCAGTG	3 cut(s)	522, 813, 900
BtsIMutI	CAGTG	8 cut(s)	238, 305, 522, 813, 900, 906, 1221, 1359
Cac8I	GCNNGC	2 cut(s)	40, 375
CaiI	CAGNNNCTG	1 cut(s)	509
CfoI	GCGC	1 cut(s)	682
Cfr10I	RCCGGY	1 cut(s)	266
Cfr13I	GGNCC	4 cut(s)	161, 264, 281, 1637
CpoI	CGGWCCG	1 cut(s)	264
CseI	GACGC	1 cut(s)	749
Csp6I	GTAC	4 cut(s)	223, 609, 838, 1391
CspAI	ACCGGT	1 cut(s)	266
CspI	CGGWCCG	1 cut(s)	264
CviAII	CATG	7 cut(s)	215, 245, 374, 407, 1098, 1400, 1596
CviQI	GTAC	4 cut(s)	223, 609, 838, 1391
DdeI	CTNAG	6 cut(s)	98, 392, 862, 1007, 1377, 1461
DpnI	GATC	6 cut(s)	521, 782, 1059, 1458, 1482, 1671
DpnII	GATC	6 cut(s)	519, 780, 1057, 1456, 1480, 1669
DraIII	CACNNNGTG	1 cut(s)	300
DrdI	GACNNNNNNGTC	1 cut(s)	271
DseDI	GACNNNNNNGTC	1 cut(s)	271
EaeI	YGGCCR	1 cut(s)	1137
Eam1104I	CTCTTC	2 cut(s)	684, 701
EarI	CTCTTC	2 cut(s)	684, 701
Ecl136II	GAGCTC	1 cut(s)	694
Eco130I	CCWWGG	1 cut(s)	406
Eco147I	AGGCCT	1 cut(s)	1269
Eco24I	GRGCYC	2 cut(s)	696, 959
Eco31I	GGTCTC	1 cut(s)	601
Eco47I	GGWCC	3 cut(s)	264, 281, 1637
Eco53kI	GAGCTC	1 cut(s)	694
Eco57I	CTGAAG	1 cut(s)	531
Eco91I	GGTNACC	1 cut(s)	844
EcoICRI	GAGCTC	1 cut(s)	694
EcoO109I	RGGNCCY	1 cut(s)	1637
EcoO65I	GGTNACC	1 cut(s)	844
EcoRII	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
EcoT14I	CCWWGG	1 cut(s)	406
EcoT22I	ATGCAT	1 cut(s)	1572
EcoT38I	GRGCYC	2 cut(s)	696, 959
ErhI	CCWWGG	1 cut(s)	406
FaeI	CATG	7 cut(s)	218, 248, 377, 410, 1101, 1403, 1599
FalI	AAGNNNNNCTT	2 cut(s)	641, 673
FaqI	GGGAC	3 cut(s)	1028, 1318, 1443
FatI	CATG	7 cut(s)	214, 244, 373, 406, 1097, 1399, 1595
FbaI	TGATCA	2 cut(s)	519, 1057
FblI	GTMKAC	2 cut(s)	738, 885
Fnu4HI	GCNGC	4 cut(s)	622, 646, 678, 1352
FokI	GGATG	1 cut(s)	570
FriOI	GRGCYC	2 cut(s)	696, 959
Fsp4HI	GCNGC	4 cut(s)	622, 646, 678, 1352
FspBI	CTAG	2 cut(s)	1104, 1284
GlaI	GCGC	1 cut(s)	681
GluI	GCNGC	4 cut(s)	622, 646, 678, 1352
GsaI	CCCAGC	1 cut(s)	1277
GsuI	CTGGAG	1 cut(s)	1284
HaeIII	GGCC	5 cut(s)	163, 318, 351, 1139, 1269
HapII	CCGG	7 cut(s)	50, 253, 262, 267, 711, 831, 873
HgaI	GACGC	1 cut(s)	749
HhaI	GCGC	1 cut(s)	682
Hin1I	GRCGYC	2 cut(s)	741, 896
Hin1II	CATG	7 cut(s)	218, 248, 377, 410, 1101, 1403, 1599
Hin6I	GCGC	1 cut(s)	680
HinP1I	GCGC	1 cut(s)	680
HincII	GTYRAC	2 cut(s)	723, 739
HindII	GTYRAC	2 cut(s)	723, 739
HindIII	AAGCTT	1 cut(s)	322
HinfI	GANTC	2 cut(s)	13, 1001
HpaII	CCGG	7 cut(s)	50, 253, 262, 267, 711, 831, 873
HphI	GGTGA	4 cut(s)	199, 331, 930, 1210
Hpy166II	GTNNAC	8 cut(s)	723, 739, 886, 900, 913, 1074, 1588, 1624
Hpy188I	TCNGA	6 cut(s)	277, 505, 562, 1010, 1535, 1677
Hpy188III	TCNNGA	3 cut(s)	262, 952, 1263
Hpy8I	GTNNAC	8 cut(s)	723, 739, 886, 900, 913, 1074, 1588, 1624
Hpy99I	CGWCG	1 cut(s)	743
HpyAV	CCTTC	3 cut(s)	53, 769, 1076
HpyCH4III	ACNGT	8 cut(s)	149, 193, 300, 403, 581, 910, 992, 1339
HpyCH4IV	ACGT	4 cut(s)	221, 228, 555, 896
HpyCH4V	TGCA	8 cut(s)	377, 818, 913, 1110, 1354, 1399, 1570, 1588
HpyF10VI	GCNNNNNNNGC	3 cut(s)	357, 439, 1107
HpyF3I	CTNAG	6 cut(s)	98, 392, 862, 1007, 1377, 1461
HpySE526I	ACGT	4 cut(s)	221, 228, 555, 896
Hsp92I	GRCGYC	2 cut(s)	741, 896
Hsp92II	CATG	7 cut(s)	218, 248, 377, 410, 1101, 1403, 1599
HspAI	GCGC	1 cut(s)	680
Kpn2I	TCCGGA	1 cut(s)	261
Ksp22I	TGATCA	2 cut(s)	519, 1057
Kzo9I	GATC	6 cut(s)	519, 780, 1057, 1456, 1480, 1669
LguI	GCTCTTC	2 cut(s)	684, 701
LmnI	GCTCC	2 cut(s)	125, 666
Lsp1109I	GCAGC	2 cut(s)	664, 1338
LweI	GCATC	2 cut(s)	553, 675
MaeI	CTAG	2 cut(s)	1104, 1284
MaeII	ACGT	4 cut(s)	221, 228, 555, 896
MaeIII	GTNAC	6 cut(s)	74, 136, 205, 217, 844, 1153
MalI	GATC	6 cut(s)	521, 782, 1059, 1458, 1482, 1671
MboI	GATC	6 cut(s)	519, 780, 1057, 1456, 1480, 1669
MboII	GAAGA	9 cut(s)	14, 23, 38, 194, 688, 691, 701, 1189, 1664
MfeI	CAATTG	3 cut(s)	132, 1077, 1500
MflI	RGATCY	1 cut(s)	1669
MhlI	GDGCHC	6 cut(s)	305, 415, 696, 915, 959, 1590
MlsI	TGGCCA	1 cut(s)	1139
MluCI	AATT	8 cut(s)	132, 604, 1077, 1279, 1365, 1408, 1438, 1500
MluNI	TGGCCA	1 cut(s)	1139
MlyI	GAGTC	1 cut(s)	995
MnlI	CCTC	9 cut(s)	321, 350, 862, 972, 975, 1259, 1280, 1668, 1671
Mox20I	TGGCCA	1 cut(s)	1139
Mph1103I	ATGCAT	1 cut(s)	1572
MroI	TCCGGA	1 cut(s)	261
MscI	TGGCCA	1 cut(s)	1139
MseI	TTAA	7 cut(s)	87, 576, 1049, 1092, 1146, 1605, 1684
MslI	CAYNNNNRTG	3 cut(s)	243, 776, 1398
Msp20I	TGGCCA	1 cut(s)	1139
MspCI	CTTAAG	1 cut(s)	1604
MspI	CCGG	7 cut(s)	50, 253, 262, 267, 711, 831, 873
MspR9I	CCNGG	6 cut(s)	159, 178, 588, 789, 873, 1554
MunI	CAATTG	3 cut(s)	132, 1077, 1500
Mva1269I	GAATGC	1 cut(s)	808
MvaI	CCWGG	5 cut(s)	159, 178, 588, 789, 1554
MwoI	GCNNNNNNNGC	3 cut(s)	357, 439, 1107
NciI	CCSGG	1 cut(s)	873
NcoI	CCATGG	1 cut(s)	406
NdeII	GATC	6 cut(s)	519, 780, 1057, 1456, 1480, 1669
NlaIII	CATG	7 cut(s)	218, 248, 377, 410, 1101, 1403, 1599
NmuCI	GTSAC	3 cut(s)	205, 217, 1153
NsiI	ATGCAT	1 cut(s)	1572
NspI	RCATGY	1 cut(s)	377
OliI	CACNNNNGTG	1 cut(s)	776
PaeI	GCATGC	1 cut(s)	377
PceI	AGGCCT	1 cut(s)	1269
PciSI	GCTCTTC	2 cut(s)	684, 701
PctI	GAATGC	1 cut(s)	808
PfeI	GAWTC	1 cut(s)	13
PflMI	CCANNNNNTGG	2 cut(s)	240, 1517
PinAI	ACCGGT	1 cut(s)	266
PkrI	GCNGC	4 cut(s)	623, 647, 679, 1353
PleI	GAGTC	1 cut(s)	995
PpsI	GAGTC	1 cut(s)	995
Ppu21I	YACGTR	1 cut(s)	222
PpuMI	RGGWCCY	1 cut(s)	1637
PsiI	TTATAA	1 cut(s)	1329
Psp124BI	GAGCTC	1 cut(s)	696
Psp1406I	AACGTT	1 cut(s)	228
Psp5II	RGGWCCY	1 cut(s)	1637
Psp6I	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
PspEI	GGTNACC	1 cut(s)	844
PspFI	CCCAGC	1 cut(s)	1273
PspGI	CCWGG	5 cut(s)	157, 176, 586, 787, 1552
PspPI	GGNCC	4 cut(s)	161, 264, 281, 1637
PspPPI	RGGWCCY	1 cut(s)	1637
PstNI	CAGNNNCTG	1 cut(s)	509
PsuI	RGATCY	1 cut(s)	1669
RsaI	GTAC	4 cut(s)	224, 610, 839, 1392
RsaNI	GTAC	4 cut(s)	223, 609, 838, 1391
RseI	CAYNNNNRTG	3 cut(s)	243, 776, 1398
Rsr2I	CGGWCCG	1 cut(s)	264
RsrII	CGGWCCG	1 cut(s)	264
SacI	GAGCTC	1 cut(s)	696
SalI	GTCGAC	1 cut(s)	737
SapI	GCTCTTC	2 cut(s)	684, 701
SaqAI	TTAA	7 cut(s)	87, 576, 1049, 1092, 1146, 1605, 1684
SatI	GCNGC	4 cut(s)	622, 646, 678, 1352
Sau3AI	GATC	6 cut(s)	519, 780, 1057, 1456, 1480, 1669
Sau96I	GGNCC	4 cut(s)	161, 264, 281, 1637
ScaI	AGTACT	1 cut(s)	839
SchI	GAGTC	1 cut(s)	995
ScrFI	CCNGG	6 cut(s)	159, 178, 588, 789, 873, 1554
SduI	GDGCHC	6 cut(s)	305, 415, 696, 915, 959, 1590
SfaNI	GCATC	2 cut(s)	553, 675
SinI	GGWCC	3 cut(s)	264, 281, 1637
SmiMI	CAYNNNNRTG	3 cut(s)	243, 776, 1398
SmlI	CTYRAG	2 cut(s)	312, 1604
SmoI	CTYRAG	2 cut(s)	312, 1604
SphI	GCATGC	1 cut(s)	377
Sse9I	AATT	8 cut(s)	132, 604, 1077, 1279, 1365, 1408, 1438, 1500
SseBI	AGGCCT	1 cut(s)	1269
SsiI	CCGC	4 cut(s)	621, 645, 664, 849
SspMI	CTAG	2 cut(s)	1104, 1284
SstI	GAGCTC	1 cut(s)	696
StuI	AGGCCT	1 cut(s)	1269
StyD4I	CCNGG	6 cut(s)	157, 176, 586, 787, 871, 1552
StyI	CCWWGG	1 cut(s)	406
TaaI	ACNGT	8 cut(s)	149, 193, 300, 403, 581, 910, 992, 1339
TaiI	ACGT	4 cut(s)	224, 231, 558, 899
TaqI	TCGA	2 cut(s)	16, 738
TaqII	GACCGA	1 cut(s)	1469
TasI	AATT	8 cut(s)	132, 604, 1077, 1279, 1365, 1408, 1438, 1500
TatI	WGTACW	2 cut(s)	837, 1390
TauI	GCSGC	2 cut(s)	624, 648
TfiI	GAWTC	1 cut(s)	13
Tru1I	TTAA	7 cut(s)	87, 576, 1049, 1092, 1146, 1605, 1684
Tru9I	TTAA	7 cut(s)	87, 576, 1049, 1092, 1146, 1605, 1684
TscAI	CASTG	8 cut(s)	245, 305, 522, 820, 907, 913, 1228, 1366
TseFI	GTSAC	3 cut(s)	205, 217, 1153
TseI	GCWGC	2 cut(s)	677, 1351
Tsp45I	GTSAC	3 cut(s)	205, 217, 1153
TspDTI	ATGAA	3 cut(s)	540, 702, 1040
TspRI	CASTG	8 cut(s)	245, 305, 522, 820, 907, 913, 1228, 1366
Van91I	CCANNNNNTGG	2 cut(s)	240, 1517
Vha464I	CTTAAG	1 cut(s)	1604
VneI	GTGCAC	2 cut(s)	911, 1586
VpaK11BI	GGWCC	3 cut(s)	264, 281, 1637
XapI	RAATTY	1 cut(s)	1279
XceI	RCATGY	1 cut(s)	377
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1518
XmiI	GTMKAC	2 cut(s)	738, 885
XspI	CTAG	2 cut(s)	1104, 1284
ZraI	GACGTC	1 cut(s)	897
ZrmI	AGTACT	1 cut(s)	839
Zsp2I	ATGCAT	1 cut(s)	1572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.