regulation of actin nucleation
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G38440 |
| fragaria_vesca | FvH4_3g27480 FvH4_6g10280 FvH4_6g10280 |
| malus_domestica | MD04G1168300.v1.1 MD12G1181800.v1.1 |
| prunus_persica | Prupe.6G286500_v2.0.a1 |
| pyrus_communis | pycom04g14930 pycom12g16620 pycom12g17100 |
| rosa_chinensis | RchiOBHm_Chr3g0461031 RchiOBHm_Chr3g0461041 |
| rosa_laevigata | RLG00000024956 |
| rosa_multiflora | Rmu_co8405745.1_g000001 Rmu_co8433481.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00418920 |
| rosa_rugosa | Rorug03G0048000 Rorug03G0048000 |
| rosa_samantha | Rh3AG105300 Rh3BG109300 Rh3CG110900 Rh3DG111000 |
| rosa_wichuraiana | Rw3G009020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 3065 |
| Acc65I | GGTACC | 2 cut(s) | 15, 2047 |
| AccB1I | GGYRCC | 4 cut(s) | 15, 2047, 3280, 3847 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3290 |
| AccI | GTMKAC | 1 cut(s) | 1198 |
| AccII | CGCG | 2 cut(s) | 691, 693 |
| AccIII | TCCGGA | 2 cut(s) | 49, 455 |
| AciI | CCGC | 5 cut(s) | 1256, 2402, 3158, 3278, 3914 |
| AclI | AACGTT | 1 cut(s) | 2508 |
| AcoI | YGGCCR | 1 cut(s) | 1558 |
| AcsI | RAATTY | 5 cut(s) | 767, 1870, 2127, 2206, 3056 |
| AcuI | CTGAAG | 7 cut(s) | 105, 1137, 1515, 1839, 2001, 2031, 2736 |
| AcvI | CACGTG | 1 cut(s) | 782 |
| AcyI | GRCGYC | 1 cut(s) | 3695 |
| AfaI | GTAC | 5 cut(s) | 17, 1585, 1840, 2049, 2767 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 462, 3134, 3240, 3290 |
| AflII | CTTAAG | 1 cut(s) | 4102 |
| AflIII | ACRYGT | 4 cut(s) | 779, 781, 1586, 3777 |
| AhlI | ACTAGT | 2 cut(s) | 1361, 1889 |
| AjiI | CACGTC | 1 cut(s) | 3780 |
| AjnI | CCWGG | 4 cut(s) | 1087, 2860, 2943, 3373 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 329, 361, 3518, 3550 |
| AleI | CACNNNNGTG | 1 cut(s) | 2903 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3369, 3401 |
| Alw21I | GWGCWC | 4 cut(s) | 1361, 3443, 3477, 3567 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1016, 2243, 2270, 3761 |
| Ama87I | CYCGRG | 1 cut(s) | 2383 |
| Aor13HI | TCCGGA | 2 cut(s) | 49, 455 |
| AoxI | GGCC | 4 cut(s) | 1558, 1601, 3824, 3902 |
| ApoI | RAATTY | 5 cut(s) | 767, 1870, 2127, 2206, 3056 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2457, 3369 |
| Asp718I | GGTACC | 2 cut(s) | 15, 2047 |
| AspA2I | CCTAGG | 1 cut(s) | 3899 |
| AspLEI | GCGC | 2 cut(s) | 691, 693 |
| AspS9I | GGNCC | 7 cut(s) | 416, 1036, 1276, 2108, 3880, 3973, 4088 |
| AsuC2I | CCSGG | 1 cut(s) | 825 |
| AsuHPI | GGTGA | 5 cut(s) | 155, 383, 2406, 2876, 3659 |
| AsuII | TTCGAA | 1 cut(s) | 1577 |
| AvaI | CYCGRG | 1 cut(s) | 2383 |
| AvaII | GGWCC | 7 cut(s) | 416, 1036, 1276, 2108, 3880, 3973, 4088 |
| AvrII | CCTAGG | 1 cut(s) | 3899 |
| AxyI | CCTNAGG | 1 cut(s) | 3600 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2655, 2688 |
| BalI | TGGCCA | 1 cut(s) | 1560 |
| BamHI | GGATCC | 2 cut(s) | 1729, 3115 |
| BanI | GGYRCC | 4 cut(s) | 15, 2047, 3280, 3847 |
| BanII | GRGCYC | 2 cut(s) | 3477, 3567 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1849, 1881 |
| BauI | CACGAG | 3 cut(s) | 231, 2586, 3560 |
| BbrPI | CACGTG | 1 cut(s) | 782 |
| BbsI | GAAGAC | 5 cut(s) | 507, 2346, 2628, 2703, 2742 |
| Bbv12I | GWGCWC | 4 cut(s) | 1361, 3443, 3477, 3567 |
| BceAI | ACGGC | 3 cut(s) | 286, 2325, 2552 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3911, 3945 |
| BciT130I | CCWGG | 4 cut(s) | 1089, 2862, 2945, 3375 |
| BclI | TGATCA | 3 cut(s) | 1402, 1618, 3664 |
| BcnI | CCSGG | 1 cut(s) | 825 |
| BcuI | ACTAGT | 2 cut(s) | 1361, 1889 |
| BfmI | CTRYAG | 5 cut(s) | 264, 1965, 3002, 3072, 3762 |
| BfrI | CTTAAG | 1 cut(s) | 4102 |
| BfuAI | ACCTGC | 1 cut(s) | 3065 |
| BglII | AGATCT | 1 cut(s) | 2274 |
| BlnI | CCTAGG | 1 cut(s) | 3899 |
| BlpI | GCTNAGC | 1 cut(s) | 2056 |
| BmcAI | AGTACT | 1 cut(s) | 2767 |
| Bme1390I | CCNGG | 5 cut(s) | 825, 1089, 2862, 2945, 3375 |
| Bme18I | GGWCC | 7 cut(s) | 416, 1036, 1276, 2108, 3880, 3973, 4088 |
| BmeT110I | CYCGRG | 1 cut(s) | 2383 |
| BmgBI | CACGTC | 1 cut(s) | 3780 |
| BmgT120I | GGNCC | 7 cut(s) | 416, 1036, 1276, 2108, 3880, 3973, 4088 |
| BmrFI | CCNGG | 5 cut(s) | 825, 1089, 2862, 2945, 3375 |
| BpiI | GAAGAC | 5 cut(s) | 507, 2346, 2628, 2703, 2742 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 568, 600, 1946, 1978 |
| BpmI | CTGGAG | 3 cut(s) | 1659, 2667, 3396 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3096 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2056 |
| Bpu14I | TTCGAA | 1 cut(s) | 1577 |
| BpuEI | CTTGAG | 2 cut(s) | 1881, 3561 |
| BpuMI | CCSGG | 1 cut(s) | 825 |
| BsaAI | YACGTR | 1 cut(s) | 782 |
| BsaBI | GATNNNNATC | 2 cut(s) | 51, 57 |
| BsaHI | GRCGYC | 1 cut(s) | 3695 |
| BsaI | GGTCTC | 2 cut(s) | 122, 3324 |
| BsaJI | CCNNGG | 9 cut(s) | 217, 422, 823, 1039, 1164, 1598, 2606, 3855, 3899 |
| BsaWI | WCCGGW | 2 cut(s) | 49, 455 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2842, 2872, 3369, 3399 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 462, 3134, 3240, 3290 |
| Bse118I | RCCGGY | 1 cut(s) | 4054 |
| Bse1I | ACTGG | 8 cut(s) | 1128, 1319, 1604, 1924, 2547, 2697, 3258, 4090 |
| Bse21I | CCTNAGG | 1 cut(s) | 3600 |
| Bse3DI | GCAATG | 6 cut(s) | 1555, 1717, 3203, 3407, 3587, 4155 |
| Bse8I | GATNNNNATC | 2 cut(s) | 51, 57 |
| BseAI | TCCGGA | 2 cut(s) | 49, 455 |
| BseBI | CCWGG | 4 cut(s) | 1089, 2862, 2945, 3375 |
| BseDI | CCNNGG | 9 cut(s) | 217, 422, 823, 1039, 1164, 1598, 2606, 3855, 3899 |
| BseJI | GATNNNNATC | 2 cut(s) | 51, 57 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 462, 3134, 3240, 3290 |
| BseMI | GCAATG | 6 cut(s) | 1555, 1717, 3203, 3407, 3587, 4155 |
| BseNI | ACTGG | 8 cut(s) | 1128, 1319, 1604, 1924, 2547, 2697, 3258, 4090 |
| BsePI | GCGCGC | 1 cut(s) | 689 |
| BseRI | GAGGAG | 4 cut(s) | 589, 671, 1120, 3536 |
| BseYI | CCCAGC | 3 cut(s) | 461, 2060, 4073 |
| BsgI | GTGCAG | 1 cut(s) | 794 |
| Bsh1236I | CGCG | 2 cut(s) | 691, 693 |
| BshFI | GGCC | 4 cut(s) | 1560, 1603, 3826, 3904 |
| BshNI | GGYRCC | 4 cut(s) | 15, 2047, 3280, 3847 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1361, 3443, 3477, 3567 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2383 |
| BsiSI | CCGG | 4 cut(s) | 50, 456, 825, 4055 |
| BslFI | GGGAC | 7 cut(s) | 616, 2317, 2486, 2698, 2796, 2855, 3866 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 462, 3134, 3240, 3290 |
| BsmFI | GGGAC | 7 cut(s) | 616, 2317, 2486, 2698, 2796, 2855, 3866 |
| BsmI | GAATGC | 2 cut(s) | 2287, 2871 |
| BsnI | GGCC | 4 cut(s) | 1560, 1603, 3826, 3904 |
| Bso31I | GGTCTC | 2 cut(s) | 122, 3324 |
| BsoBI | CYCGRG | 1 cut(s) | 2383 |
| Bsp119I | TTCGAA | 1 cut(s) | 1577 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1361, 3443, 3477, 3567 |
| Bsp13I | TCCGGA | 2 cut(s) | 49, 455 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2056 |
| Bsp19I | CCATGG | 2 cut(s) | 217, 1164 |
| BspACI | CCGC | 5 cut(s) | 1256, 2402, 3158, 3278, 3914 |
| BspANI | GGCC | 4 cut(s) | 1560, 1603, 3826, 3904 |
| BspEI | TCCGGA | 2 cut(s) | 49, 455 |
| BspFNI | CGCG | 2 cut(s) | 691, 693 |
| BspHI | TCATGA | 5 cut(s) | 175, 1513, 2449, 2461, 3937 |
| BspMAI | CTGCAG | 3 cut(s) | 3006, 3076, 3766 |
| BspMI | ACCTGC | 1 cut(s) | 3065 |
| BspT104I | TTCGAA | 1 cut(s) | 1577 |
| BspT107I | GGYRCC | 4 cut(s) | 15, 2047, 3280, 3847 |
| BspTI | CTTAAG | 1 cut(s) | 4102 |
| BspTNI | GGTCTC | 2 cut(s) | 122, 3324 |
| BsrDI | GCAATG | 6 cut(s) | 1555, 1717, 3203, 3407, 3587, 4155 |
| BsrFI | RCCGGY | 1 cut(s) | 4054 |
| BsrI | ACTGG | 8 cut(s) | 1128, 1319, 1604, 1924, 2547, 2697, 3258, 4090 |
| BssAI | RCCGGY | 1 cut(s) | 4054 |
| BssECI | CCNNGG | 9 cut(s) | 217, 422, 823, 1039, 1164, 1598, 2606, 3855, 3899 |
| BssHII | GCGCGC | 1 cut(s) | 689 |
| BssNI | GRCGYC | 1 cut(s) | 3695 |
| BssSI | CACGAG | 3 cut(s) | 231, 2586, 3560 |
| BssT1I | CCWWGG | 7 cut(s) | 217, 422, 1164, 1598, 2606, 3855, 3899 |
| Bst2BI | CACGAG | 3 cut(s) | 231, 2586, 3560 |
| Bst2UI | CCWGG | 4 cut(s) | 1089, 2862, 2945, 3375 |
| Bst6I | CTCTTC | 1 cut(s) | 1257 |
| BstACI | GRCGYC | 1 cut(s) | 3695 |
| BstAFI | CTTAAG | 1 cut(s) | 4102 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3761 |
| BstBAI | YACGTR | 1 cut(s) | 782 |
| BstBI | TTCGAA | 1 cut(s) | 1577 |
| BstC8I | GCNNGC | 6 cut(s) | 691, 1387, 2974, 3049, 4020, 4056 |
| BstDSI | CCRYGG | 3 cut(s) | 217, 1039, 1164 |
| BstFNI | CGCG | 2 cut(s) | 691, 693 |
| BstHHI | GCGC | 2 cut(s) | 691, 693 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 158, 2408, 3275, 3545, 3752, 3761, 3901, 3932 |
| BstNI | CCWGG | 4 cut(s) | 1089, 2862, 2945, 3375 |
| BstNSI | RCATGY | 3 cut(s) | 632, 1590, 3178 |
| BstSCI | CCNGG | 5 cut(s) | 823, 1087, 2860, 2943, 3373 |
| BstSFI | CTRYAG | 5 cut(s) | 264, 1965, 3002, 3072, 3762 |
| BstUI | CGCG | 2 cut(s) | 691, 693 |
| BstV2I | GAAGAC | 5 cut(s) | 507, 2346, 2628, 2703, 2742 |
| BstX2I | RGATCY | 6 cut(s) | 46, 52, 682, 1729, 2274, 3115 |
| BstYI | RGATCY | 6 cut(s) | 46, 52, 682, 1729, 2274, 3115 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3600 |
| BsuRI | GGCC | 4 cut(s) | 1560, 1603, 3826, 3904 |
| BtgI | CCRYGG | 3 cut(s) | 217, 1039, 1164 |
| BtgZI | GCGATG | 2 cut(s) | 2448, 3675 |
| BtrI | CACGTC | 1 cut(s) | 3780 |
| BtsI | GCAGTG | 1 cut(s) | 1380 |
| BtsIMutI | CAGTG | 9 cut(s) | 593, 1017, 1135, 1380, 1631, 2178, 2554, 3441, 3813 |
| BveI | ACCTGC | 1 cut(s) | 3065 |
| Cac8I | GCNNGC | 6 cut(s) | 691, 1387, 2974, 3049, 4020, 4056 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1016, 2243, 2270, 3761 |
| CciI | TCATGA | 5 cut(s) | 175, 1513, 2449, 2461, 3937 |
| CfoI | GCGC | 2 cut(s) | 691, 693 |
| Cfr10I | RCCGGY | 1 cut(s) | 4054 |
| Cfr13I | GGNCC | 7 cut(s) | 416, 1036, 1276, 2108, 3880, 3973, 4088 |
| CseI | GACGC | 5 cut(s) | 122, 1160, 3570, 3703, 3954 |
| Csp6I | GTAC | 5 cut(s) | 16, 1584, 1839, 2048, 2766 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2479, 2514 |
| CviQI | GTAC | 5 cut(s) | 16, 1584, 1839, 2048, 2766 |
| EaeI | YGGCCR | 1 cut(s) | 1558 |
| Eam1104I | CTCTTC | 1 cut(s) | 1257 |
| EarI | CTCTTC | 1 cut(s) | 1257 |
| EciI | GGCGGA | 1 cut(s) | 3147 |
| Ecl136II | GAGCTC | 2 cut(s) | 3475, 3565 |
| Eco130I | CCWWGG | 7 cut(s) | 217, 422, 1164, 1598, 2606, 3855, 3899 |
| Eco24I | GRGCYC | 2 cut(s) | 3477, 3567 |
| Eco31I | GGTCTC | 2 cut(s) | 122, 3324 |
| Eco47I | GGWCC | 7 cut(s) | 416, 1036, 1276, 2108, 3880, 3973, 4088 |
| Eco53kI | GAGCTC | 2 cut(s) | 3475, 3565 |
| Eco57I | CTGAAG | 7 cut(s) | 105, 1137, 1515, 1839, 2001, 2031, 2736 |
| Eco72I | CACGTG | 1 cut(s) | 782 |
| Eco81I | CCTNAGG | 1 cut(s) | 3600 |
| Eco88I | CYCGRG | 1 cut(s) | 2383 |
| EcoICRI | GAGCTC | 2 cut(s) | 3475, 3565 |
| EcoO109I | RGGNCCY | 2 cut(s) | 416, 1276 |
| EcoRI | GAATTC | 1 cut(s) | 2127 |
| EcoRII | CCWGG | 4 cut(s) | 1087, 2860, 2943, 3373 |
| EcoT14I | CCWWGG | 7 cut(s) | 217, 422, 1164, 1598, 2606, 3855, 3899 |
| EcoT22I | ATGCAT | 3 cut(s) | 619, 2730, 3397 |
| EcoT38I | GRGCYC | 2 cut(s) | 3477, 3567 |
| ErhI | CCWWGG | 7 cut(s) | 217, 422, 1164, 1598, 2606, 3855, 3899 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 78, 110 |
| FaqI | GGGAC | 7 cut(s) | 616, 2317, 2486, 2698, 2796, 2855, 3866 |
| FauI | CCCGC | 1 cut(s) | 2395 |
| FauNDI | CATATG | 1 cut(s) | 520 |
| FbaI | TGATCA | 3 cut(s) | 1402, 1618, 3664 |
| FblI | GTMKAC | 1 cut(s) | 1198 |
| FriOI | GRGCYC | 2 cut(s) | 3477, 3567 |
| GlaI | GCGC | 2 cut(s) | 690, 692 |
| GsaI | CCCAGC | 3 cut(s) | 465, 2064, 4077 |
| GsuI | CTGGAG | 3 cut(s) | 1659, 2667, 3396 |
| HaeIII | GGCC | 4 cut(s) | 1560, 1603, 3826, 3904 |
| HapII | CCGG | 4 cut(s) | 50, 456, 825, 4055 |
| HgaI | GACGC | 5 cut(s) | 122, 1160, 3570, 3703, 3954 |
| HhaI | GCGC | 2 cut(s) | 691, 693 |
| Hin1I | GRCGYC | 1 cut(s) | 3695 |
| Hin6I | GCGC | 2 cut(s) | 689, 691 |
| HinP1I | GCGC | 2 cut(s) | 689, 691 |
| HincII | GTYRAC | 5 cut(s) | 9, 137, 834, 973, 2191 |
| HindII | GTYRAC | 5 cut(s) | 9, 137, 834, 973, 2191 |
| HpaI | GTTAAC | 1 cut(s) | 973 |
| HpaII | CCGG | 4 cut(s) | 50, 456, 825, 4055 |
| HphI | GGTGA | 5 cut(s) | 155, 383, 2406, 2876, 3659 |
| Hpy99I | CGWCG | 3 cut(s) | 2222, 3586, 4166 |
| HpyCH4IV | ACGT | 9 cut(s) | 512, 781, 1485, 2017, 2193, 2220, 2508, 2787, 3779 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 158, 2408, 3275, 3545, 3752, 3761, 3901, 3932 |
| HpySE526I | ACGT | 9 cut(s) | 512, 781, 1485, 2017, 2193, 2220, 2508, 2787, 3779 |
| Hsp92I | GRCGYC | 1 cut(s) | 3695 |
| HspAI | GCGC | 2 cut(s) | 689, 691 |
| Kpn2I | TCCGGA | 2 cut(s) | 49, 455 |
| KpnI | GGTACC | 2 cut(s) | 19, 2051 |
| KroI | GCCGGC | 1 cut(s) | 4054 |
| KroNI | GCCGGC | 1 cut(s) | 4056 |
| Ksp22I | TGATCA | 3 cut(s) | 1402, 1618, 3664 |
| KspAI | GTTAAC | 1 cut(s) | 973 |
| LmnI | GCTCC | 3 cut(s) | 458, 658, 3480 |
| MaeII | ACGT | 9 cut(s) | 512, 781, 1485, 2017, 2193, 2220, 2508, 2787, 3779 |
| MaeIII | GTNAC | 9 cut(s) | 26, 361, 371, 865, 1486, 1929, 2173, 3353, 4060 |
| MfeI | CAATTG | 1 cut(s) | 344 |
| MflI | RGATCY | 6 cut(s) | 46, 52, 682, 1729, 2274, 3115 |
| MhlI | GDGCHC | 4 cut(s) | 1361, 3443, 3477, 3567 |
| MlsI | TGGCCA | 1 cut(s) | 1560 |
| MluNI | TGGCCA | 1 cut(s) | 1560 |
| MlyI | GAGTC | 6 cut(s) | 111, 1178, 2339, 2578, 2684, 2720 |
| MmeI | TCCRAC | 4 cut(s) | 225, 1152, 2694, 4166 |
| Mox20I | TGGCCA | 1 cut(s) | 1560 |
| Mph1103I | ATGCAT | 3 cut(s) | 619, 2730, 3397 |
| MroI | TCCGGA | 2 cut(s) | 49, 455 |
| MroNI | GCCGGC | 1 cut(s) | 4054 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2457, 3369 |
| MscI | TGGCCA | 1 cut(s) | 1560 |
| MslI | CAYNNNNRTG | 6 cut(s) | 280, 586, 1305, 2292, 2903, 4148 |
| Msp20I | TGGCCA | 1 cut(s) | 1560 |
| MspA1I | CMGCKG | 4 cut(s) | 2060, 2120, 3278, 3595 |
| MspCI | CTTAAG | 1 cut(s) | 4102 |
| MspI | CCGG | 4 cut(s) | 50, 456, 825, 4055 |
| MspR9I | CCNGG | 5 cut(s) | 825, 1089, 2862, 2945, 3375 |
| MunI | CAATTG | 1 cut(s) | 344 |
| Mva1269I | GAATGC | 2 cut(s) | 2287, 2871 |
| MvaI | CCWGG | 4 cut(s) | 1089, 2862, 2945, 3375 |
| MvnI | CGCG | 2 cut(s) | 691, 693 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 158, 2408, 3275, 3545, 3752, 3761, 3901, 3932 |
| NaeI | GCCGGC | 1 cut(s) | 4056 |
| NciI | CCSGG | 1 cut(s) | 825 |
| NcoI | CCATGG | 2 cut(s) | 217, 1164 |
| NdeI | CATATG | 1 cut(s) | 520 |
| NgoMIV | GCCGGC | 1 cut(s) | 4054 |
| NmuCI | GTSAC | 3 cut(s) | 371, 2173, 3353 |
| NsiI | ATGCAT | 3 cut(s) | 619, 2730, 3397 |
| NspI | RCATGY | 3 cut(s) | 632, 1590, 3178 |
| NspV | TTCGAA | 1 cut(s) | 1577 |
| OliI | CACNNNNGTG | 1 cut(s) | 2903 |
| PagI | TCATGA | 5 cut(s) | 175, 1513, 2449, 2461, 3937 |
| PauI | GCGCGC | 1 cut(s) | 689 |
| PciI | ACATGT | 1 cut(s) | 1586 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2023 |
| PctI | GAATGC | 2 cut(s) | 2287, 2871 |
| PdiI | GCCGGC | 1 cut(s) | 4056 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2457, 3369 |
| PflFI | GACNNNGTC | 1 cut(s) | 2498 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3290 |
| PfoI | TCCNGGA | 1 cut(s) | 3373 |
| PleI | GAGTC | 6 cut(s) | 110, 1177, 2338, 2578, 2683, 2719 |
| PmaCI | CACGTG | 1 cut(s) | 782 |
| PmlI | CACGTG | 1 cut(s) | 782 |
| PpsI | GAGTC | 6 cut(s) | 110, 1177, 2338, 2578, 2683, 2719 |
| Ppu21I | YACGTR | 1 cut(s) | 782 |
| PpuMI | RGGWCCY | 2 cut(s) | 416, 1276 |
| PscI | ACATGT | 1 cut(s) | 1586 |
| Psp124BI | GAGCTC | 2 cut(s) | 3477, 3567 |
| Psp1406I | AACGTT | 1 cut(s) | 2508 |
| Psp5II | RGGWCCY | 2 cut(s) | 416, 1276 |
| Psp6I | CCWGG | 4 cut(s) | 1087, 2860, 2943, 3373 |
| PspCI | CACGTG | 1 cut(s) | 782 |
| PspFI | CCCAGC | 3 cut(s) | 461, 2060, 4073 |
| PspGI | CCWGG | 4 cut(s) | 1087, 2860, 2943, 3373 |
| PspPI | GGNCC | 7 cut(s) | 416, 1036, 1276, 2108, 3880, 3973, 4088 |
| PspPPI | RGGWCCY | 2 cut(s) | 416, 1276 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1036, 1068 |
| PstI | CTGCAG | 3 cut(s) | 3006, 3076, 3766 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1016, 2243, 2270, 3761 |
| PsuI | RGATCY | 6 cut(s) | 46, 52, 682, 1729, 2274, 3115 |
| PsyI | GACNNNGTC | 1 cut(s) | 2498 |
| PteI | GCGCGC | 1 cut(s) | 689 |
| PvuII | CAGCTG | 3 cut(s) | 2060, 2120, 3595 |
| RsaI | GTAC | 5 cut(s) | 17, 1585, 1840, 2049, 2767 |
| RsaNI | GTAC | 5 cut(s) | 16, 1584, 1839, 2048, 2766 |
| RseI | CAYNNNNRTG | 6 cut(s) | 280, 586, 1305, 2292, 2903, 4148 |
| SacI | GAGCTC | 2 cut(s) | 3477, 3567 |
| Sau96I | GGNCC | 7 cut(s) | 416, 1036, 1276, 2108, 3880, 3973, 4088 |
| ScaI | AGTACT | 1 cut(s) | 2767 |
| SchI | GAGTC | 6 cut(s) | 111, 1178, 2339, 2578, 2684, 2720 |
| ScrFI | CCNGG | 5 cut(s) | 825, 1089, 2862, 2945, 3375 |
| SduI | GDGCHC | 4 cut(s) | 1361, 3443, 3477, 3567 |
| SfcI | CTRYAG | 5 cut(s) | 264, 1965, 3002, 3072, 3762 |
| SfuI | TTCGAA | 1 cut(s) | 1577 |
| SinI | GGWCC | 7 cut(s) | 416, 1036, 1276, 2108, 3880, 3973, 4088 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 280, 586, 1305, 2292, 2903, 4148 |
| SmlI | CTYRAG | 3 cut(s) | 1896, 3576, 4102 |
| SmoI | CTYRAG | 3 cut(s) | 1896, 3576, 4102 |
| SpeI | ACTAGT | 2 cut(s) | 1361, 1889 |
| SsiI | CCGC | 5 cut(s) | 1256, 2402, 3158, 3278, 3914 |
| SstI | GAGCTC | 2 cut(s) | 3477, 3567 |
| StyD4I | CCNGG | 5 cut(s) | 823, 1087, 2860, 2943, 3373 |
| StyI | CCWWGG | 7 cut(s) | 217, 422, 1164, 1598, 2606, 3855, 3899 |
| TaiI | ACGT | 9 cut(s) | 515, 784, 1488, 2020, 2196, 2223, 2511, 2790, 3782 |
| TaqI | TCGA | 8 cut(s) | 412, 1577, 1737, 2582, 2615, 2940, 3252, 3921 |
| TatI | WGTACW | 1 cut(s) | 2765 |
| TauI | GCSGC | 1 cut(s) | 3281 |
| TscAI | CASTG | 9 cut(s) | 593, 1017, 1135, 1387, 1638, 2178, 2554, 3448, 3813 |
| TseFI | GTSAC | 3 cut(s) | 371, 2173, 3353 |
| Tsp45I | GTSAC | 3 cut(s) | 371, 2173, 3353 |
| TspGWI | ACGGA | 3 cut(s) | 1028, 2353, 4030 |
| TspRI | CASTG | 9 cut(s) | 593, 1017, 1135, 1387, 1638, 2178, 2554, 3448, 3813 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2498 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3290 |
| Vha464I | CTTAAG | 1 cut(s) | 4102 |
| VpaK11BI | GGWCC | 7 cut(s) | 416, 1036, 1276, 2108, 3880, 3973, 4088 |
| XapI | RAATTY | 5 cut(s) | 767, 1870, 2127, 2206, 3056 |
| XbaI | TCTAGA | 1 cut(s) | 209 |
| XceI | RCATGY | 3 cut(s) | 632, 1590, 3178 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2821 |
| XmaJI | CCTAGG | 1 cut(s) | 3899 |
| XmiI | GTMKAC | 1 cut(s) | 1198 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2457, 3369 |
| ZrmI | AGTACT | 1 cut(s) | 2767 |
| Zsp2I | ATGCAT | 3 cut(s) | 619, 2730, 3397 |