regulation of actin nucleation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G38440 |
| fragaria_vesca | FvH4_3g27480 FvH4_6g10280 FvH4_6g10280 |
| malus_domestica | MD04G1168300.v1.1 MD12G1181800.v1.1 |
| prunus_persica | Prupe.6G286500_v2.0.a1 |
| pyrus_communis | pycom04g14930 pycom12g16620 pycom12g17100 |
| rosa_chinensis | RchiOBHm_Chr3g0461031 RchiOBHm_Chr3g0461041 |
| rosa_laevigata | RLG00000024956 |
| rosa_multiflora | Rmu_co8405745.1_g000001 Rmu_co8433481.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00418920 |
| rosa_rugosa | Rorug03G0048000 Rorug03G0048000 |
| rosa_samantha | Rh3AG105300 Rh3BG109300 Rh3CG110900 Rh3DG111000 |
| rosa_wichuraiana | Rw3G009020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2366 |
| Acc36I | ACCTGC | 1 cut(s) | 2366 |
| Acc65I | GGTACC | 1 cut(s) | 15 |
| AccB1I | GGYRCC | 2 cut(s) | 15, 2555 |
| AccI | GTMKAC | 2 cut(s) | 796, 4707 |
| AccII | CGCG | 2 cut(s) | 13, 234 |
| AccIII | TCCGGA | 1 cut(s) | 49 |
| AcoI | YGGCCR | 3 cut(s) | 42, 111, 4648 |
| AcuI | CTGAAG | 5 cut(s) | 1140, 1425, 2166, 2913, 4778 |
| AcyI | GRCGYC | 2 cut(s) | 102, 2556 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 920, 1072, 1528, 1562, 1720, 3845, 3926, 4502 |
| AflIII | ACRYGT | 4 cut(s) | 1300, 2167, 2203, 2239 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1222 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4254, 4286 |
| Alw21I | GWGCWC | 2 cut(s) | 57, 845 |
| Alw26I | GTCTC | 9 cut(s) | 366, 770, 915, 1282, 2113, 2289, 3410, 3864, 3970 |
| AlwNI | CAGNNNCTG | 7 cut(s) | 358, 1280, 1475, 3143, 3718, 4046, 4307 |
| Ama87I | CYCGRG | 1 cut(s) | 83 |
| Aor13HI | TCCGGA | 1 cut(s) | 49 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2846, 2878 |
| AseI | ATTAAT | 1 cut(s) | 4292 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 171, 1872, 2673, 2793, 3549, 4680 |
| Asp718I | GGTACC | 1 cut(s) | 15 |
| AspLEI | GCGC | 2 cut(s) | 663, 2558 |
| AspS9I | GGNCC | 5 cut(s) | 416, 556, 1668, 2251, 3847 |
| AsuC2I | CCSGG | 2 cut(s) | 413, 3073 |
| AsuHPI | GGTGA | 8 cut(s) | 355, 611, 1052, 1926, 2347, 3258, 3983, 4103 |
| AsuII | TTCGAA | 1 cut(s) | 1380 |
| AsuNHI | GCTAGC | 1 cut(s) | 3658 |
| AvaI | CYCGRG | 1 cut(s) | 83 |
| AvaII | GGWCC | 2 cut(s) | 416, 1668 |
| AxyI | CCTNAGG | 1 cut(s) | 4401 |
| BaeGI | GKGCMC | 1 cut(s) | 3596 |
| BalI | TGGCCA | 1 cut(s) | 4650 |
| BamHI | GGATCC | 1 cut(s) | 2809 |
| BanI | GGYRCC | 2 cut(s) | 15, 2555 |
| BanII | GRGCYC | 2 cut(s) | 57, 845 |
| BbsI | GAAGAC | 2 cut(s) | 718, 1116 |
| Bbv12I | GWGCWC | 2 cut(s) | 57, 845 |
| BbvCI | CCTCAGC | 1 cut(s) | 4236 |
| BccI | CCATC | 9 cut(s) | 631, 967, 995, 1031, 1097, 1960, 2413, 2614, 3400 |
| BceAI | ACGGC | 4 cut(s) | 52, 219, 2036, 4398 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 143, 177 |
| BciVI | GTATCC | 4 cut(s) | 970, 1130, 1204, 3117 |
| BclI | TGATCA | 2 cut(s) | 360, 3238 |
| BcnI | CCSGG | 2 cut(s) | 413, 3073 |
| BcoDI | GTCTC | 9 cut(s) | 366, 770, 915, 1282, 2113, 2289, 3410, 3864, 3970 |
| BfaI | CTAG | 9 cut(s) | 930, 1757, 3360, 3462, 3659, 3749, 4185, 4394, 4614 |
| BfmI | CTRYAG | 4 cut(s) | 729, 900, 2320, 3770 |
| BfoI | RGCGCY | 1 cut(s) | 2559 |
| BfuAI | ACCTGC | 1 cut(s) | 2366 |
| BfuI | GTATCC | 4 cut(s) | 970, 1130, 1204, 3117 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 123 |
| BglII | AGATCT | 1 cut(s) | 2686 |
| BmcAI | AGTACT | 1 cut(s) | 1738 |
| Bme18I | GGWCC | 2 cut(s) | 416, 1668 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1222 |
| BmeT110I | CYCGRG | 1 cut(s) | 83 |
| BmgT120I | GGNCC | 5 cut(s) | 416, 556, 1668, 2251, 3847 |
| BmiI | GGNNCC | 7 cut(s) | 17, 417, 1669, 2557, 2811, 3537, 4032 |
| BmrI | ACTGGG | 2 cut(s) | 1152, 3299 |
| BmtI | GCTAGC | 1 cut(s) | 3662 |
| BmuI | ACTGGG | 2 cut(s) | 1152, 3299 |
| BoxI | GACNNNNGTC | 3 cut(s) | 2168, 2204, 2240 |
| BpiI | GAAGAC | 2 cut(s) | 718, 1116 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1528, 1560 |
| BpmI | CTGGAG | 7 cut(s) | 610, 674, 771, 897, 2535, 2727, 2788 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1719, 4236 |
| Bpu14I | TTCGAA | 1 cut(s) | 1380 |
| BpuEI | CTTGAG | 6 cut(s) | 724, 2049, 2113, 3608, 3928, 4160 |
| BpuMI | CCSGG | 2 cut(s) | 413, 3073 |
| BsaAI | YACGTR | 1 cut(s) | 1177 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2814, 2973, 3900 |
| BsaHI | GRCGYC | 2 cut(s) | 102, 2556 |
| BsaI | GGTCTC | 1 cut(s) | 3970 |
| BsaWI | WCCGGW | 2 cut(s) | 49, 3268 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 583, 613, 769, 799, 2574, 2604, 4254, 4284 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 920, 1072, 1528, 1562, 1720, 3845, 3926, 4502 |
| Bse118I | RCCGGY | 1 cut(s) | 113 |
| Bse1I | ACTGG | 9 cut(s) | 332, 1158, 1212, 1370, 1395, 1917, 3294, 3985, 4114 |
| Bse21I | CCTNAGG | 1 cut(s) | 4401 |
| Bse3DI | GCAATG | 3 cut(s) | 1989, 2368, 3602 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2814, 2973, 3900 |
| BseAI | TCCGGA | 1 cut(s) | 49 |
| BseJI | GATNNNNATC | 3 cut(s) | 2814, 2973, 3900 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 920, 1072, 1528, 1562, 1720, 3845, 3926, 4502 |
| BseMI | GCAATG | 3 cut(s) | 1989, 2368, 3602 |
| BseNI | ACTGG | 9 cut(s) | 332, 1158, 1212, 1370, 1395, 1917, 3294, 3985, 4114 |
| BseRI | GAGGAG | 5 cut(s) | 411, 671, 1307, 2354, 2394 |
| BseSI | GKGCMC | 1 cut(s) | 3596 |
| BseYI | CCCAGC | 1 cut(s) | 455 |
| Bsh1236I | CGCG | 2 cut(s) | 13, 234 |
| BshNI | GGYRCC | 2 cut(s) | 15, 2555 |
| BsiHKAI | GWGCWC | 2 cut(s) | 57, 845 |
| BsiHKCI | CYCGRG | 1 cut(s) | 83 |
| BsiSI | CCGG | 7 cut(s) | 50, 114, 412, 3073, 3269, 4124, 4562 |
| BslFI | GGGAC | 4 cut(s) | 1681, 2156, 3055, 3805 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 920, 1072, 1528, 1562, 1720, 3845, 3926, 4502 |
| BsmAI | GTCTC | 9 cut(s) | 366, 770, 915, 1282, 2113, 2289, 3410, 3864, 3970 |
| BsmBI | CGTCTC | 1 cut(s) | 2113 |
| BsmFI | GGGAC | 4 cut(s) | 1681, 2156, 3055, 3805 |
| BsmI | GAATGC | 4 cut(s) | 413, 2093, 3939, 4316 |
| Bso31I | GGTCTC | 1 cut(s) | 3970 |
| BsoBI | CYCGRG | 1 cut(s) | 83 |
| Bsp119I | TTCGAA | 1 cut(s) | 1380 |
| Bsp1286I | GDGCHC | 3 cut(s) | 57, 845, 3596 |
| Bsp13I | TCCGGA | 1 cut(s) | 49 |
| Bsp19I | CCATGG | 4 cut(s) | 108, 217, 2114, 2431 |
| BspEI | TCCGGA | 1 cut(s) | 49 |
| BspFNI | CGCG | 2 cut(s) | 13, 234 |
| BspHI | TCATGA | 2 cut(s) | 175, 3064 |
| BspLI | GGNNCC | 7 cut(s) | 17, 417, 1669, 2557, 2811, 3537, 4032 |
| BspMAI | CTGCAG | 3 cut(s) | 733, 904, 3774 |
| BspMI | ACCTGC | 1 cut(s) | 2366 |
| BspOI | GCTAGC | 1 cut(s) | 3662 |
| BspT104I | TTCGAA | 1 cut(s) | 1380 |
| BspT107I | GGYRCC | 2 cut(s) | 15, 2555 |
| BspTNI | GGTCTC | 1 cut(s) | 3970 |
| BsrDI | GCAATG | 3 cut(s) | 1989, 2368, 3602 |
| BsrFI | RCCGGY | 1 cut(s) | 113 |
| BsrI | ACTGG | 9 cut(s) | 332, 1158, 1212, 1370, 1395, 1917, 3294, 3985, 4114 |
| BssAI | RCCGGY | 1 cut(s) | 113 |
| BssNI | GRCGYC | 2 cut(s) | 102, 2556 |
| BssT1I | CCWWGG | 5 cut(s) | 108, 217, 2114, 2431, 2632 |
| Bst6I | CTCTTC | 4 cut(s) | 1354, 2307, 2799, 4339 |
| BstACI | GRCGYC | 2 cut(s) | 102, 2556 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1886, 2501, 4246 |
| BstBAI | YACGTR | 1 cut(s) | 1177 |
| BstBI | TTCGAA | 1 cut(s) | 1380 |
| BstC8I | GCNNGC | 6 cut(s) | 115, 3192, 3502, 3596, 3660, 4764 |
| BstDSI | CCRYGG | 4 cut(s) | 108, 217, 2114, 2431 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3924 |
| BstFNI | CGCG | 2 cut(s) | 13, 234 |
| BstH2I | RGCGCY | 1 cut(s) | 2559 |
| BstHHI | GCGC | 2 cut(s) | 663, 2558 |
| BstMAI | GTCTC | 9 cut(s) | 366, 770, 915, 1282, 2113, 2289, 3410, 3864, 3970 |
| BstNSI | RCATGY | 9 cut(s) | 471, 632, 1304, 1503, 2171, 2207, 2243, 2468, 3423 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 2168, 2204, 2240 |
| BstSFI | CTRYAG | 4 cut(s) | 729, 900, 2320, 3770 |
| BstSLI | GKGCMC | 1 cut(s) | 3596 |
| BstUI | CGCG | 2 cut(s) | 13, 234 |
| BstV2I | GAAGAC | 2 cut(s) | 718, 1116 |
| BstX2I | RGATCY | 9 cut(s) | 725, 992, 1487, 1595, 2686, 2809, 4405, 4602, 4778 |
| BstYI | RGATCY | 9 cut(s) | 725, 992, 1487, 1595, 2686, 2809, 4405, 4602, 4778 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4401 |
| BsuI | GTATCC | 4 cut(s) | 970, 1130, 1204, 3117 |
| BtgI | CCRYGG | 4 cut(s) | 108, 217, 2114, 2431 |
| BtsI | GCAGTG | 5 cut(s) | 1132, 3632, 3697, 4057, 4638 |
| BveI | ACCTGC | 1 cut(s) | 2366 |
| Cac8I | GCNNGC | 6 cut(s) | 115, 3192, 3502, 3596, 3660, 4764 |
| CaiI | CAGNNNCTG | 7 cut(s) | 358, 1280, 1475, 3143, 3718, 4046, 4307 |
| CciI | TCATGA | 2 cut(s) | 175, 3064 |
| CfoI | GCGC | 2 cut(s) | 663, 2558 |
| Cfr10I | RCCGGY | 1 cut(s) | 113 |
| Cfr13I | GGNCC | 5 cut(s) | 416, 556, 1668, 2251, 3847 |
| CseI | GACGC | 4 cut(s) | 19, 91, 122, 223 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2548, 2583 |
| DinI | GGCGCC | 1 cut(s) | 2557 |
| DraI | TTTAAA | 3 cut(s) | 474, 502, 3522 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1222 |
| EaeI | YGGCCR | 3 cut(s) | 42, 111, 4648 |
| Eam1104I | CTCTTC | 4 cut(s) | 1354, 2307, 2799, 4339 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1222 |
| EarI | CTCTTC | 4 cut(s) | 1354, 2307, 2799, 4339 |
| EciI | GGCGGA | 1 cut(s) | 4850 |
| Ecl136II | GAGCTC | 2 cut(s) | 55, 843 |
| Eco130I | CCWWGG | 5 cut(s) | 108, 217, 2114, 2431, 2632 |
| Eco147I | AGGCCT | 2 cut(s) | 89, 2631 |
| Eco24I | GRGCYC | 2 cut(s) | 57, 845 |
| Eco31I | GGTCTC | 1 cut(s) | 3970 |
| Eco32I | GATATC | 2 cut(s) | 2527, 3381 |
| Eco47I | GGWCC | 2 cut(s) | 416, 1668 |
| Eco53kI | GAGCTC | 2 cut(s) | 55, 843 |
| Eco57I | CTGAAG | 5 cut(s) | 1140, 1425, 2166, 2913, 4778 |
| Eco81I | CCTNAGG | 1 cut(s) | 4401 |
| Eco88I | CYCGRG | 1 cut(s) | 83 |
| EcoICRI | GAGCTC | 2 cut(s) | 55, 843 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3924 |
| EcoO109I | RGGNCCY | 1 cut(s) | 416 |
| EcoRI | GAATTC | 1 cut(s) | 4680 |
| EcoRV | GATATC | 2 cut(s) | 2527, 3381 |
| EcoT14I | CCWWGG | 5 cut(s) | 108, 217, 2114, 2431, 2632 |
| EcoT22I | ATGCAT | 2 cut(s) | 1505, 2880 |
| EcoT38I | GRGCYC | 2 cut(s) | 57, 845 |
| EgeI | GGCGCC | 1 cut(s) | 2557 |
| EheI | GGCGCC | 1 cut(s) | 2557 |
| ErhI | CCWWGG | 5 cut(s) | 108, 217, 2114, 2431, 2632 |
| Esp3I | CGTCTC | 1 cut(s) | 2113 |
| FaqI | GGGAC | 4 cut(s) | 1681, 2156, 3055, 3805 |
| FauI | CCCGC | 5 cut(s) | 454, 834, 1984, 4374, 4867 |
| FauNDI | CATATG | 1 cut(s) | 1588 |
| FbaI | TGATCA | 2 cut(s) | 360, 3238 |
| FblI | GTMKAC | 2 cut(s) | 796, 4707 |
| FriOI | GRGCYC | 2 cut(s) | 57, 845 |
| FseI | GGCCGGCC | 1 cut(s) | 117 |
| FspBI | CTAG | 9 cut(s) | 930, 1757, 3360, 3462, 3659, 3749, 4185, 4394, 4614 |
| GlaI | GCGC | 2 cut(s) | 662, 2557 |
| GsaI | CCCAGC | 1 cut(s) | 459 |
| GsuI | CTGGAG | 7 cut(s) | 610, 674, 771, 897, 2535, 2727, 2788 |
| HaeII | RGCGCY | 1 cut(s) | 2559 |
| HapII | CCGG | 7 cut(s) | 50, 114, 412, 3073, 3269, 4124, 4562 |
| HgaI | GACGC | 4 cut(s) | 19, 91, 122, 223 |
| HhaI | GCGC | 2 cut(s) | 663, 2558 |
| Hin1I | GRCGYC | 2 cut(s) | 102, 2556 |
| Hin6I | GCGC | 2 cut(s) | 661, 2556 |
| HinP1I | GCGC | 2 cut(s) | 661, 2556 |
| HincII | GTYRAC | 6 cut(s) | 9, 325, 736, 1261, 3467, 4512 |
| HindII | GTYRAC | 6 cut(s) | 9, 325, 736, 1261, 3467, 4512 |
| HindIII | AAGCTT | 1 cut(s) | 1909 |
| HpaI | GTTAAC | 1 cut(s) | 1261 |
| HpaII | CCGG | 7 cut(s) | 50, 114, 412, 3073, 3269, 4124, 4562 |
| HphI | GGTGA | 8 cut(s) | 355, 611, 1052, 1926, 2347, 3258, 3983, 4103 |
| Hpy99I | CGWCG | 3 cut(s) | 107, 125, 696 |
| HpyCH4IV | ACGT | 2 cut(s) | 1176, 2122 |
| HpySE526I | ACGT | 2 cut(s) | 1176, 2122 |
| Hsp92I | GRCGYC | 2 cut(s) | 102, 2556 |
| HspAI | GCGC | 2 cut(s) | 661, 2556 |
| KasI | GGCGCC | 1 cut(s) | 2555 |
| Kpn2I | TCCGGA | 1 cut(s) | 49 |
| KpnI | GGTACC | 1 cut(s) | 19 |
| KroI | GCCGGC | 1 cut(s) | 113 |
| KroNI | GCCGGC | 1 cut(s) | 115 |
| Ksp22I | TGATCA | 2 cut(s) | 360, 3238 |
| KspAI | GTTAAC | 1 cut(s) | 1261 |
| LmnI | GCTCC | 6 cut(s) | 52, 464, 658, 1565, 2161, 4030 |
| MaeI | CTAG | 9 cut(s) | 930, 1757, 3360, 3462, 3659, 3749, 4185, 4394, 4614 |
| MaeII | ACGT | 2 cut(s) | 1176, 2122 |
| MfeI | CAATTG | 3 cut(s) | 264, 968, 4851 |
| MflI | RGATCY | 9 cut(s) | 725, 992, 1487, 1595, 2686, 2809, 4405, 4602, 4778 |
| MhlI | GDGCHC | 3 cut(s) | 57, 845, 3596 |
| MlsI | TGGCCA | 1 cut(s) | 4650 |
| MluNI | TGGCCA | 1 cut(s) | 4650 |
| Mly113I | GGCGCC | 1 cut(s) | 2556 |
| MmeI | TCCRAC | 7 cut(s) | 262, 1565, 2441, 2642, 3162, 4384, 4883 |
| Mox20I | TGGCCA | 1 cut(s) | 4650 |
| Mph1103I | ATGCAT | 2 cut(s) | 1505, 2880 |
| MroI | TCCGGA | 1 cut(s) | 49 |
| MroNI | GCCGGC | 1 cut(s) | 113 |
| MroXI | GAANNNNTTC | 6 cut(s) | 171, 1872, 2673, 2793, 3549, 4680 |
| MscI | TGGCCA | 1 cut(s) | 4650 |
| MslI | CAYNNNNRTG | 1 cut(s) | 720 |
| Msp20I | TGGCCA | 1 cut(s) | 4650 |
| MspA1I | CMGCKG | 2 cut(s) | 533, 1969 |
| MspI | CCGG | 7 cut(s) | 50, 114, 412, 3073, 3269, 4124, 4562 |
| MunI | CAATTG | 3 cut(s) | 264, 968, 4851 |
| Mva1269I | GAATGC | 4 cut(s) | 413, 2093, 3939, 4316 |
| MvnI | CGCG | 2 cut(s) | 13, 234 |
| NaeI | GCCGGC | 1 cut(s) | 115 |
| NarI | GGCGCC | 1 cut(s) | 2556 |
| NciI | CCSGG | 2 cut(s) | 413, 3073 |
| NcoI | CCATGG | 4 cut(s) | 108, 217, 2114, 2431 |
| NdeI | CATATG | 1 cut(s) | 1588 |
| NgoMIV | GCCGGC | 1 cut(s) | 113 |
| NheI | GCTAGC | 1 cut(s) | 3658 |
| NlaIV | GGNNCC | 7 cut(s) | 17, 417, 1669, 2557, 2811, 3537, 4032 |
| NmeAIII | GCCGAG | 3 cut(s) | 120, 178, 2988 |
| NsiI | ATGCAT | 2 cut(s) | 1505, 2880 |
| NspI | RCATGY | 9 cut(s) | 471, 632, 1304, 1503, 2171, 2207, 2243, 2468, 3423 |
| NspV | TTCGAA | 1 cut(s) | 1380 |
| PagI | TCATGA | 2 cut(s) | 175, 3064 |
| PaqCI | CACCTGC | 1 cut(s) | 2366 |
| PceI | AGGCCT | 2 cut(s) | 89, 2631 |
| PciI | ACATGT | 4 cut(s) | 1300, 2167, 2203, 2239 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 42 |
| PctI | GAATGC | 4 cut(s) | 413, 2093, 3939, 4316 |
| PdiI | GCCGGC | 1 cut(s) | 115 |
| PdmI | GAANNNNTTC | 6 cut(s) | 171, 1872, 2673, 2793, 3549, 4680 |
| PluTI | GGCGCC | 1 cut(s) | 2559 |
| Ppu21I | YACGTR | 1 cut(s) | 1177 |
| PpuMI | RGGWCCY | 1 cut(s) | 416 |
| PscI | ACATGT | 4 cut(s) | 1300, 2167, 2203, 2239 |
| PshAI | GACNNNNGTC | 3 cut(s) | 2168, 2204, 2240 |
| PshBI | ATTAAT | 1 cut(s) | 4292 |
| Psp124BI | GAGCTC | 2 cut(s) | 57, 845 |
| Psp5II | RGGWCCY | 1 cut(s) | 416 |
| PspFI | CCCAGC | 1 cut(s) | 455 |
| PspN4I | GGNNCC | 7 cut(s) | 17, 417, 1669, 2557, 2811, 3537, 4032 |
| PspPI | GGNCC | 5 cut(s) | 416, 556, 1668, 2251, 3847 |
| PspPPI | RGGWCCY | 1 cut(s) | 416 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 916, 948 |
| PstI | CTGCAG | 3 cut(s) | 733, 904, 3774 |
| PstNI | CAGNNNCTG | 7 cut(s) | 358, 1280, 1475, 3143, 3718, 4046, 4307 |
| PsuI | RGATCY | 9 cut(s) | 725, 992, 1487, 1595, 2686, 2809, 4405, 4602, 4778 |
| PvuII | CAGCTG | 1 cut(s) | 1969 |
| RigI | GGCCGGCC | 1 cut(s) | 117 |
| RseI | CAYNNNNRTG | 1 cut(s) | 720 |
| SacI | GAGCTC | 2 cut(s) | 57, 845 |
| Sau96I | GGNCC | 5 cut(s) | 416, 556, 1668, 2251, 3847 |
| ScaI | AGTACT | 1 cut(s) | 1738 |
| SduI | GDGCHC | 3 cut(s) | 57, 845, 3596 |
| SfcI | CTRYAG | 4 cut(s) | 729, 900, 2320, 3770 |
| SfoI | GGCGCC | 1 cut(s) | 2557 |
| SfuI | TTCGAA | 1 cut(s) | 1380 |
| SinI | GGWCC | 2 cut(s) | 416, 1668 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 720 |
| SmlI | CTYRAG | 6 cut(s) | 739, 2064, 2128, 3587, 3943, 4139 |
| SmoI | CTYRAG | 6 cut(s) | 739, 2064, 2128, 3587, 3943, 4139 |
| SseBI | AGGCCT | 2 cut(s) | 89, 2631 |
| SspDI | GGCGCC | 1 cut(s) | 2555 |
| SspI | AATATT | 1 cut(s) | 171 |
| SspMI | CTAG | 9 cut(s) | 930, 1757, 3360, 3462, 3659, 3749, 4185, 4394, 4614 |
| SstI | GAGCTC | 2 cut(s) | 57, 845 |
| StuI | AGGCCT | 2 cut(s) | 89, 2631 |
| StyI | CCWWGG | 5 cut(s) | 108, 217, 2114, 2431, 2632 |
| TaiI | ACGT | 2 cut(s) | 1179, 2125 |
| TaqI | TCGA | 4 cut(s) | 1380, 2481, 3959, 4061 |
| TatI | WGTACW | 4 cut(s) | 1736, 1993, 2443, 3909 |
| TauI | GCSGC | 2 cut(s) | 68, 4199 |
| TspGWI | ACGGA | 3 cut(s) | 40, 480, 2848 |
| VpaK11BI | GGWCC | 2 cut(s) | 416, 1668 |
| VspI | ATTAAT | 1 cut(s) | 4292 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3924 |
| XbaI | TCTAGA | 1 cut(s) | 4393 |
| XceI | RCATGY | 9 cut(s) | 471, 632, 1304, 1503, 2171, 2207, 2243, 2468, 3423 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3624 |
| XmiI | GTMKAC | 2 cut(s) | 796, 4707 |
| XmnI | GAANNNNTTC | 6 cut(s) | 171, 1872, 2673, 2793, 3549, 4680 |
| XspI | CTAG | 9 cut(s) | 930, 1757, 3360, 3462, 3659, 3749, 4185, 4394, 4614 |
| ZrmI | AGTACT | 1 cut(s) | 1738 |
| Zsp2I | ATGCAT | 2 cut(s) | 1505, 2880 |