Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0008418

Physical Location & Seq

Genomic Coordinates Reverse (-)

17709396 .. 17713702

Gene Structure 4307 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g14930.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGCCGTTGACAAGGTACCAGATAAGGAACGAGTACGGCTTGGCCGATCCGGAATTGTACAGAGCAGCCGATAGGGATGATCCGGAGGCTCTACTGGAAGGCGTCGCCATGGCCGGCCTCGTCGGTGTTTTGCGGCAGCTCGGCGACCTTGCTGAGTTTGCCGCTGAAATATTTCATGACTTGCACGAAGAAGTAATGGCAACCGCTACACGAGGCCATGGTCTAGTGGTTCGTGTCCAACAGCTTGAAGCGGACTTTCCCTCAATTGAGAAGGCACTTCTATCTCAAACCAATCATTCTTCCTTCTTTTCCAATCCAGGGGTTGACTGGCATCCTAATCTGCGTTCTGAACAGAATATGATCACTCGTGGAGACTTACCTCGCTTTGTAATGGATTCTTATGAAGAATGCCGTGGTCCTCCTCAGCTGTTCCTTTTGGACAAGTTTGATGTTGCTGGAGCTGGGGCATGTTTGAAGCGGTTCACTGATCCGTCATTCTTTAAAGTCGAATCAGCATCTTCAATAACAGTAGAGATGCAGAGAGAAAAGAAGACCCGTAAAGTGAAGAAGAAAGGATCCCGCTGGAGGAATGGTGAAACCCCAGAAGTTGCACTGACATCACATGCCAAGTCAAATGCCAAACTGCATGAGTTGTTCCTGGAGGAGCGTATTGAGAATCGTTCTAGTGATCCTGCACATCGTGTGAAATTGAAGAAAAGGCATTTGAATCGATCTGCAGTTGACACAAAAACTGGGAAAAGTTACATGAAGACATTTCTGGAGACTCTTTCACCAGAACGCAAACTTATTTGTGAAACTTCTGTTGGTCCACCGCTCTTGAGATTGACCTTAGATGATAGCAGTGAGCCAGACCTTAGAATACTTGACATCACTACAGTAAGTCCTGCTGAAATGTCCCCAGAAAGGAAAAGTGCTAGCTCTTCACCTGATGTCCATGAAGATATATTTAAACCATCCGTGGATGGATTTAATAGGGGGGTTTTCGATAGAGAAATTCCAGAGGGGTCTGAACCAAACTCTGATGTTGAGACAAATGAAAATTATTCCAACCTTCATCAGGTGGCAGCTGATAAACAAATAGCAGTTGGTGGAGAACATAAAACTGAAGGCAGCATGGAGGGTTCCACCCCCTCCAGTTCTGATGATAGGACCAGTGAGGTAGACAATTACATGGATGCTCTTGCAACTTTGGAATCAGAAATGGAAACTGACAATGAATTTAAACCTAAGAACAATCTACGCTTCCAGAACGTGGAAACGTACGGGACAGATTCTGATGCAAATGAGGAGGAACATCTGGAGCTTCAAACTCGATTTTCGGATTCTCAATCAATTGGAAACTCCTCTACATCGGATGACGGGAAGAATTCATTTGAAAAAGATACAGCCAGTTTTTCGCACTCTGATAGTCTAAGCAATGTGGTTGAGAATTCACCATCAGAGTGTGATGGAGCAGCTAAAGAATTCCCTTCCACTGAAACCTGTGGAGCTGAGATTTTTGAGATGTCATCCAACCAGAAATCTGAATTCGTGGAGTCTCTAGAAGCCACAACAAAGGAGCAGGTGGTGTCTAATAATGCATGCATTGTGGAAGACATAATCCCTGATTCTGGAGATACATCTTACAGTGCATTTGTTAGGGATATGAGTCCTACGCTACATTCAGACACTGGAGCAAACTCGCCAGTGGTATCATTGGCAGGACCTGTGTTAGATGATAACCCCTCTGACGAAATTAAAGTTGATTGTAAACCATTAGACATTGACGAAAATGAGACAAATCTGGATAATTCTCTGCCTGTTGTCCGTGACTCCCAGACTAATGATGCTTCACCAAGCCATCCCATTGATGAGCCAGACATGGAAGATTTAGGTTTCAGTTCCGATGCTTTGCCACATTTGTCAAACGTTGAAGAGCTTGCTTCTGAAGATCAAAGTAGAAATAATGATGTGAATAAAATACTTAAGACACAATATGCAGATGAAGATTCTCTAGAAAGCTTTGCCAGAAAGATTGATTCACCACGCTTAAGTATTTCATCCACAGAAGAGCAGCTTTCCTCAGCCCTGCCAGAAGAACAAATATCTTCAGGTAATACATTACTGCCTTATTATAGAGATGTTATAAATCTTGATAACACGGCTTCCAGACTTGATAATCCTGTTTCACCAACTGCAGTCAACTCCGAAGTTGTACCGTTTGTGGTGGATGCTGCACAGAGTCATATCTCAGAAGAGCCTGTAGTGGATGCTCCACAGACACATGGCCTAATAGATCAGCAGGATGCTTGGCAGGCACATGGTCTAACAGAGCAGCAGGATGCTCCACAGAGACGTGGCCTAACAGAGCAGCAGGATGCTCCACAGAGACGTGGCCTAACAGAGAAGCAGGATGCTCCCCAGATGCATGGCCTAATAGAGCAGCAATTATCTGATTTAGATGAGGATGTTCCCCAACTTGAATCCGTCAAAGAAGAAGTGGGTATTCCACATTATGAAGAAAAATTCAACGTAGAAGAGAGATTTAGTGCCGTGGATAACGATGAATTATCTGATTTAAATGAGGATGTTCCCCAACTTGAATCCGTCAAAGCAGAAGCGGGTATTCCACATTATGAAGAAAAATTCAATGTAGAAGAGAGATTTAGTACCGTGGATGATGATGAATTACAATTATTCACAAGTGATGCTGATGTAGGAGGTGATACCGTTTCTGTGGAACTTCCATCTAATTGTCCAACTTTCACAGGCCACGAAGATCATGTGAATTCAGATCGATCTGGTACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010638 GO:0016020 GO:0016043 GO:0030029 GO:0030036 GO:0030154 GO:0030832 GO:0030833 GO:0030838 GO:0031209 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0032991 GO:0033043 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048468 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051125 GO:0051127 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0090558 GO:0090626 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

937

Amino Acids

103.63

Weight (kDa)

4.42

Isoelectric Point (pI)

54.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008418)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38440
fragaria_vesca	FvH4_3g27480 FvH4_6g10280 FvH4_6g10280
malus_domestica	MD04G1168300.v1.1 MD12G1181800.v1.1
prunus_persica	Prupe.6G286500_v2.0.a1
pyrus_communis	pycom04g14930 pycom12g16620 pycom12g17100
rosa_chinensis	RchiOBHm_Chr3g0461031 RchiOBHm_Chr3g0461041
rosa_laevigata	RLG00000024956
rosa_multiflora	Rmu_co8405745.1_g000001 Rmu_co8433481.1_g000001
rosa_roxburghii	Rroxscaffold_6G00418920
rosa_rugosa	Rorug03G0048000 Rorug03G0048000
rosa_samantha	Rh3AG105300 Rh3BG109300 Rh3CG110900 Rh3DG111000
rosa_wichuraiana	Rw3G009020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2147
AarI	CACCTGC	1 cut(s)	1573
Acc36I	ACCTGC	1 cut(s)	1573
Acc65I	GGTACC	2 cut(s)	15, 2804
AccB1I	GGYRCC	2 cut(s)	15, 2804
AccB7I	CCANNNNNTGG	1 cut(s)	1273
AccBSI	CCGCTC	1 cut(s)	835
AccI	GTMKAC	1 cut(s)	1182
AccIII	TCCGGA	2 cut(s)	49, 82
AciI	CCGC	8 cut(s)	133, 162, 204, 251, 478, 580, 833, 2621
AclI	AACGTT	1 cut(s)	1929
AclWI	GGATC	6 cut(s)	41, 74, 482, 570, 583, 683
AcoI	YGGCCR	2 cut(s)	42, 111
AcsI	RAATTY	9 cut(s)	1014, 1238, 1387, 1450, 1484, 1547, 2525, 2645, 2788
AcuI	CTGAAG	3 cut(s)	1146, 1968, 2094
AcyI	GRCGYC	1 cut(s)	102
AdeI	CACNNNGTG	1 cut(s)	701
AfaI	GTAC	7 cut(s)	17, 35, 59, 1283, 2217, 2671, 2806
AfiI	CCNNNNNNNGG	6 cut(s)	318, 585, 924, 1078, 1273, 1631
AflII	CTTAAG	2 cut(s)	1985, 2050
AjiI	CACGTC	2 cut(s)	2357, 2393
AjnI	CCWGG	2 cut(s)	316, 657
AjuI	GAANNNNNNNTTGG	2 cut(s)	807, 839
Alw26I	GTCTC	7 cut(s)	366, 776, 1043, 1563, 1790, 2347, 2383
AlwI	GGATC	6 cut(s)	41, 74, 482, 570, 583, 683
AlwNI	CAGNNNCTG	3 cut(s)	1295, 1691, 1727
Aor13HI	TCCGGA	2 cut(s)	49, 82
AoxI	GGCC	9 cut(s)	42, 111, 115, 214, 2287, 2359, 2395, 2431, 2770
ApoI	RAATTY	9 cut(s)	1014, 1238, 1387, 1450, 1484, 1547, 2525, 2645, 2788
Asp700I	GAANNNNTTC	2 cut(s)	171, 479
Asp718I	GGTACC	2 cut(s)	15, 2804
AspS9I	GGNCC	4 cut(s)	416, 827, 1170, 1724
AsuHPI	GGTGA	8 cut(s)	605, 783, 936, 1446, 1845, 2034, 2181, 2735
AsuNHI	GCTAGC	1 cut(s)	935
AvaII	GGWCC	4 cut(s)	416, 827, 1170, 1724
BamHI	GGATCC	1 cut(s)	575
BanI	GGYRCC	2 cut(s)	15, 2804
BauI	CACGAG	2 cut(s)	210, 366
BbsI	GAAGAC	3 cut(s)	557, 776, 1620
BbvCI	CCTCAGC	2 cut(s)	423, 2083
BccI	CCATC	6 cut(s)	977, 982, 1463, 1465, 1869, 2755
BceAI	ACGGC	4 cut(s)	52, 396, 2178, 2537
BcgI	CGANNNNNNTGC	2 cut(s)	710, 744
BciT130I	CCWGG	2 cut(s)	318, 659
BclI	TGATCA	1 cut(s)	360
BcoDI	GTCTC	7 cut(s)	366, 776, 1043, 1563, 1790, 2347, 2383
BfaI	CTAG	5 cut(s)	224, 684, 936, 1562, 2015
BfmI	CTRYAG	4 cut(s)	735, 894, 2196, 2262
BfrI	CTTAAG	2 cut(s)	1985, 2050
BfuAI	ACCTGC	1 cut(s)	1573
Bme1390I	CCNGG	2 cut(s)	318, 659
Bme18I	GGWCC	4 cut(s)	416, 827, 1170, 1724
BmgBI	CACGTC	2 cut(s)	2357, 2393
BmgT120I	GGNCC	4 cut(s)	416, 827, 1170, 1724
BmiI	GGNNCC	4 cut(s)	17, 577, 1144, 2806
BmrFI	CCNGG	2 cut(s)	318, 659
BmrI	ACTGGG	1 cut(s)	762
BmtI	GCTAGC	1 cut(s)	939
BmuI	ACTGGG	1 cut(s)	762
BpiI	GAAGAC	3 cut(s)	557, 776, 1620
BpmI	CTGGAG	8 cut(s)	477, 604, 680, 800, 1138, 1340, 1653, 1713
Bpu10I	CCTNAGC	2 cut(s)	423, 2083
BpuEI	CTTGAG	1 cut(s)	859
Bsa29I	ATCGAT	2 cut(s)	730, 2797
BsaHI	GRCGYC	1 cut(s)	102
BsaJI	CCNNGG	7 cut(s)	108, 217, 317, 412, 978, 2553, 2673
BsaWI	WCCGGW	2 cut(s)	49, 82
BsaXI	ACNNNNNCTCC	2 cut(s)	577, 607
Bsc4I	CCNNNNNNNGG	6 cut(s)	318, 585, 924, 1078, 1273, 1631
Bse118I	RCCGGY	1 cut(s)	113
Bse1I	ACTGG	8 cut(s)	99, 332, 757, 1155, 1173, 1410, 1696, 1706
Bse3DI	GCAATG	1 cut(s)	1444
BseAI	TCCGGA	2 cut(s)	49, 82
BseBI	CCWGG	2 cut(s)	318, 659
BseCI	ATCGAT	2 cut(s)	730, 2797
BseDI	CCNNGG	7 cut(s)	108, 217, 317, 412, 978, 2553, 2673
BseLI	CCNNNNNNNGG	6 cut(s)	318, 585, 924, 1078, 1273, 1631
BseMI	GCAATG	1 cut(s)	1444
BseMII	CTCAG	5 cut(s)	144, 437, 1503, 2097, 2265
BseNI	ACTGG	8 cut(s)	99, 332, 757, 1155, 1173, 1410, 1696, 1706
BseRI	GAGGAG	4 cut(s)	411, 677, 1322, 1354
BseYI	CCCAGC	1 cut(s)	461
BsgI	GTGCAG	2 cut(s)	678, 2220
BshFI	GGCC	9 cut(s)	44, 113, 117, 216, 2289, 2361, 2397, 2433, 2772
BshNI	GGYRCC	2 cut(s)	15, 2804
BshVI	ATCGAT	2 cut(s)	730, 2797
BsiSI	CCGG	3 cut(s)	50, 83, 114
BsiWI	CGTACG	1 cut(s)	1281
BslFI	GGGAC	2 cut(s)	901, 1300
BslI	CCNNNNNNNGG	6 cut(s)	318, 585, 924, 1078, 1273, 1631
BsmAI	GTCTC	7 cut(s)	366, 776, 1043, 1563, 1790, 2347, 2383
BsmBI	CGTCTC	2 cut(s)	2347, 2383
BsmFI	GGGAC	2 cut(s)	901, 1300
BsmI	GAATGC	1 cut(s)	413
BsnI	GGCC	9 cut(s)	44, 113, 117, 216, 2289, 2361, 2397, 2433, 2772
Bsp13I	TCCGGA	2 cut(s)	49, 82
Bsp1407I	TGTACA	1 cut(s)	57
Bsp19I	CCATGG	2 cut(s)	108, 217
BspACI	CCGC	8 cut(s)	133, 162, 204, 251, 478, 580, 833, 2621
BspANI	GGCC	9 cut(s)	44, 113, 117, 216, 2289, 2361, 2397, 2433, 2772
BspCNI	CTCAG	5 cut(s)	145, 436, 1504, 2096, 2264
BspDI	ATCGAT	2 cut(s)	730, 2797
BspEI	TCCGGA	2 cut(s)	49, 82
BspHI	TCATGA	1 cut(s)	175
BspLI	GGNNCC	4 cut(s)	17, 577, 1144, 2806
BspMAI	CTGCAG	2 cut(s)	739, 2200
BspMI	ACCTGC	1 cut(s)	1573
BspOI	GCTAGC	1 cut(s)	939
BspPI	GGATC	6 cut(s)	41, 74, 482, 570, 583, 683
BspQI	GCTCTTC	4 cut(s)	946, 1929, 2064, 2250
BspT107I	GGYRCC	2 cut(s)	15, 2804
BspTI	CTTAAG	2 cut(s)	1985, 2050
BsrBI	CCGCTC	1 cut(s)	835
BsrDI	GCAATG	1 cut(s)	1444
BsrFI	RCCGGY	1 cut(s)	113
BsrGI	TGTACA	1 cut(s)	57
BsrI	ACTGG	8 cut(s)	99, 332, 757, 1155, 1173, 1410, 1696, 1706
BssAI	RCCGGY	1 cut(s)	113
BssECI	CCNNGG	7 cut(s)	108, 217, 317, 412, 978, 2553, 2673
BssNI	GRCGYC	1 cut(s)	102
BssSI	CACGAG	2 cut(s)	210, 366
BssT1I	CCWWGG	2 cut(s)	108, 217
Bst2BI	CACGAG	2 cut(s)	210, 366
Bst2UI	CCWGG	2 cut(s)	318, 659
Bst4CI	ACNGT	6 cut(s)	529, 898, 1649, 2220, 2674, 2731
Bst6I	CTCTTC	6 cut(s)	946, 1929, 2064, 2250, 2532, 2652
BstACI	GRCGYC	1 cut(s)	102
BstAFI	CTTAAG	2 cut(s)	1985, 2050
BstAUI	TGTACA	1 cut(s)	57
BstC8I	GCNNGC	5 cut(s)	115, 937, 1603, 1941, 2316
BstDEI	CTNAG	9 cut(s)	153, 423, 850, 875, 1248, 1433, 1512, 2083, 2251
BstDSI	CCRYGG	6 cut(s)	108, 217, 412, 978, 2553, 2673
BstENI	CCTNNNNNAGG	1 cut(s)	1076
BstMAI	GTCTC	7 cut(s)	366, 776, 1043, 1563, 1790, 2347, 2383
BstMWI	GCNNNNNNNGC	2 cut(s)	158, 2315
BstNI	CCWGG	2 cut(s)	318, 659
BstNSI	RCATGY	3 cut(s)	471, 626, 1605
BstSCI	CCNGG	2 cut(s)	316, 657
BstSFI	CTRYAG	4 cut(s)	735, 894, 2196, 2262
BstV2I	GAAGAC	3 cut(s)	557, 776, 1620
BstX2I	RGATCY	1 cut(s)	575
BstXI	CCANNNNNNTGG	1 cut(s)	2429
BstYI	RGATCY	1 cut(s)	575
Bsu15I	ATCGAT	2 cut(s)	730, 2797
BsuRI	GGCC	9 cut(s)	44, 113, 117, 216, 2289, 2361, 2397, 2433, 2772
BsuTUI	ATCGAT	2 cut(s)	730, 2797
BtgI	CCRYGG	6 cut(s)	108, 217, 412, 978, 2553, 2673
BtrI	CACGTC	2 cut(s)	2357, 2393
BtsI	GCAGTG	1 cut(s)	868
BtsIMutI	CAGTG	8 cut(s)	483, 611, 868, 1180, 1494, 1654, 1689, 1713
BveI	ACCTGC	1 cut(s)	1573
Cac8I	GCNNGC	5 cut(s)	115, 937, 1603, 1941, 2316
CaiI	CAGNNNCTG	3 cut(s)	1295, 1691, 1727
CciI	TCATGA	1 cut(s)	175
Cfr10I	RCCGGY	1 cut(s)	113
Cfr13I	GGNCC	4 cut(s)	416, 827, 1170, 1724
ClaI	ATCGAT	2 cut(s)	730, 2797
CseI	GACGC	1 cut(s)	91
Csp6I	GTAC	7 cut(s)	16, 34, 58, 1282, 2216, 2670, 2805
CspCI	CAANNNNNGTGG	2 cut(s)	819, 854
CviQI	GTAC	7 cut(s)	16, 34, 58, 1282, 2216, 2670, 2805
DdeI	CTNAG	9 cut(s)	153, 423, 850, 875, 1248, 1433, 1512, 2083, 2251
DraI	TTTAAA	4 cut(s)	502, 970, 1243, 2580
DraIII	CACNNNGTG	1 cut(s)	701
EaeI	YGGCCR	2 cut(s)	42, 111
Eam1104I	CTCTTC	6 cut(s)	946, 1929, 2064, 2250, 2532, 2652
EarI	CTCTTC	6 cut(s)	946, 1929, 2064, 2250, 2532, 2652
Eco130I	CCWWGG	2 cut(s)	108, 217
Eco47I	GGWCC	4 cut(s)	416, 827, 1170, 1724
Eco57I	CTGAAG	3 cut(s)	1146, 1968, 2094
EcoNI	CCTNNNNNAGG	1 cut(s)	1076
EcoO109I	RGGNCCY	1 cut(s)	1724
EcoRI	GAATTC	5 cut(s)	1387, 1450, 1484, 1547, 2788
EcoRII	CCWGG	2 cut(s)	316, 657
EcoT14I	CCWWGG	2 cut(s)	108, 217
EcoT22I	ATGCAT	3 cut(s)	1603, 1607, 2430
ErhI	CCWWGG	2 cut(s)	108, 217
Esp3I	CGTCTC	2 cut(s)	2347, 2383
FalI	AAGNNNNNCTT	2 cut(s)	2061, 2093
FaqI	GGGAC	2 cut(s)	901, 1300
FauI	CCCGC	2 cut(s)	587, 2614
FbaI	TGATCA	1 cut(s)	360
FblI	GTMKAC	1 cut(s)	1182
FseI	GGCCGGCC	1 cut(s)	117
FspBI	CTAG	5 cut(s)	224, 684, 936, 1562, 2015
GsaI	CCCAGC	1 cut(s)	465
GsuI	CTGGAG	8 cut(s)	477, 604, 680, 800, 1138, 1340, 1653, 1713
HaeIII	GGCC	9 cut(s)	44, 113, 117, 216, 2289, 2361, 2397, 2433, 2772
HapII	CCGG	3 cut(s)	50, 83, 114
HgaI	GACGC	1 cut(s)	91
Hin1I	GRCGYC	1 cut(s)	102
HincII	GTYRAC	4 cut(s)	9, 325, 742, 2203
HindII	GTYRAC	4 cut(s)	9, 325, 742, 2203
HindIII	AAGCTT	1 cut(s)	2020
HpaII	CCGG	3 cut(s)	50, 83, 114
HphI	GGTGA	8 cut(s)	605, 783, 936, 1446, 1845, 2034, 2181, 2735
Hpy166II	GTNNAC	8 cut(s)	9, 325, 483, 742, 830, 1183, 1772, 2203
Hpy8I	GTNNAC	8 cut(s)	9, 325, 483, 742, 830, 1183, 1772, 2203
Hpy99I	CGWCG	2 cut(s)	107, 125
HpyAV	CCTTC	6 cut(s)	92, 265, 313, 1082, 1121, 1500
HpyCH4III	ACNGT	6 cut(s)	529, 898, 1649, 2220, 2674, 2731
HpyCH4IV	ACGT	6 cut(s)	1272, 1280, 1929, 2356, 2392, 2532
HpyF10VI	GCNNNNNNNGC	2 cut(s)	158, 2315
HpyF3I	CTNAG	9 cut(s)	153, 423, 850, 875, 1248, 1433, 1512, 2083, 2251
HpySE526I	ACGT	6 cut(s)	1272, 1280, 1929, 2356, 2392, 2532
Hsp92I	GRCGYC	1 cut(s)	102
Kpn2I	TCCGGA	2 cut(s)	49, 82
KpnI	GGTACC	2 cut(s)	19, 2808
KroI	GCCGGC	1 cut(s)	113
KroNI	GCCGGC	1 cut(s)	115
Ksp22I	TGATCA	1 cut(s)	360
LguI	GCTCTTC	4 cut(s)	946, 1929, 2064, 2250
MaeI	CTAG	5 cut(s)	224, 684, 936, 1562, 2015
MaeII	ACGT	6 cut(s)	1272, 1280, 1929, 2356, 2392, 2532
MaeIII	GTNAC	2 cut(s)	761, 1829
MbiI	CCGCTC	1 cut(s)	835
MfeI	CAATTG	2 cut(s)	264, 1353
MflI	RGATCY	1 cut(s)	575
MlyI	GAGTC	5 cut(s)	778, 1565, 1678, 1826, 2251
MmeI	TCCRAC	4 cut(s)	262, 1092, 1557, 2783
Mph1103I	ATGCAT	3 cut(s)	1603, 1607, 2430
MroI	TCCGGA	2 cut(s)	49, 82
MroNI	GCCGGC	1 cut(s)	113
MroXI	GAANNNNTTC	2 cut(s)	171, 479
MseI	TTAA	8 cut(s)	501, 969, 990, 1242, 1758, 1986, 2051, 2579
MslI	CAYNNNNRTG	1 cut(s)	1462
MspA1I	CMGCKG	4 cut(s)	164, 427, 582, 1088
MspCI	CTTAAG	2 cut(s)	1985, 2050
MspI	CCGG	3 cut(s)	50, 83, 114
MspR9I	CCNGG	2 cut(s)	318, 659
MunI	CAATTG	2 cut(s)	264, 1353
Mva1269I	GAATGC	1 cut(s)	413
MvaI	CCWGG	2 cut(s)	318, 659
MwoI	GCNNNNNNNGC	2 cut(s)	158, 2315
NaeI	GCCGGC	1 cut(s)	115
NcoI	CCATGG	2 cut(s)	108, 217
NgoMIV	GCCGGC	1 cut(s)	113
NheI	GCTAGC	1 cut(s)	935
NlaIV	GGNNCC	4 cut(s)	17, 577, 1144, 2806
NmeAIII	GCCGAG	1 cut(s)	120
NmuCI	GTSAC	1 cut(s)	1829
NsiI	ATGCAT	3 cut(s)	1603, 1607, 2430
NspI	RCATGY	3 cut(s)	471, 626, 1605
PaeI	GCATGC	1 cut(s)	1605
PagI	TCATGA	1 cut(s)	175
PaqCI	CACCTGC	1 cut(s)	1573
PciSI	GCTCTTC	4 cut(s)	946, 1929, 2064, 2250
PcsI	WCGNNNNNNNCGW	1 cut(s)	42
PctI	GAATGC	1 cut(s)	413
PdiI	GCCGGC	1 cut(s)	115
PdmI	GAANNNNTTC	2 cut(s)	171, 479
Pfl23II	CGTACG	1 cut(s)	1281
PflMI	CCANNNNNTGG	1 cut(s)	1273
PfoI	TCCNGGA	1 cut(s)	657
PleI	GAGTC	5 cut(s)	778, 1564, 1677, 1826, 2250
PpsI	GAGTC	5 cut(s)	778, 1564, 1677, 1826, 2250
PpuMI	RGGWCCY	1 cut(s)	1724
PsiI	TTATAA	1 cut(s)	2147
Psp1406I	AACGTT	1 cut(s)	1929
Psp5II	RGGWCCY	1 cut(s)	1724
Psp6I	CCWGG	2 cut(s)	316, 657
PspFI	CCCAGC	1 cut(s)	461
PspGI	CCWGG	2 cut(s)	316, 657
PspLI	CGTACG	1 cut(s)	1281
PspN4I	GGNNCC	4 cut(s)	17, 577, 1144, 2806
PspPI	GGNCC	4 cut(s)	416, 827, 1170, 1724
PspPPI	RGGWCCY	1 cut(s)	1724
PstI	CTGCAG	2 cut(s)	739, 2200
PstNI	CAGNNNCTG	3 cut(s)	1295, 1691, 1727
PsuI	RGATCY	1 cut(s)	575
PvuII	CAGCTG	2 cut(s)	427, 1088
RigI	GGCCGGCC	1 cut(s)	117
RsaI	GTAC	7 cut(s)	17, 35, 59, 1283, 2217, 2671, 2806
RsaNI	GTAC	7 cut(s)	16, 34, 58, 1282, 2216, 2670, 2805
RseI	CAYNNNNRTG	1 cut(s)	1462
SapI	GCTCTTC	4 cut(s)	946, 1929, 2064, 2250
SaqAI	TTAA	8 cut(s)	501, 969, 990, 1242, 1758, 1986, 2051, 2579
Sau96I	GGNCC	4 cut(s)	416, 827, 1170, 1724
SchI	GAGTC	5 cut(s)	778, 1565, 1678, 1826, 2251
ScrFI	CCNGG	2 cut(s)	318, 659
SfcI	CTRYAG	4 cut(s)	735, 894, 2196, 2262
SinI	GGWCC	4 cut(s)	416, 827, 1170, 1724
SmiI	ATTTAAAT	1 cut(s)	2580
SmiMI	CAYNNNNRTG	1 cut(s)	1462
SmlI	CTYRAG	3 cut(s)	838, 1985, 2050
SmoI	CTYRAG	3 cut(s)	838, 1985, 2050
SphI	GCATGC	1 cut(s)	1605
SsiI	CCGC	8 cut(s)	133, 162, 204, 251, 478, 580, 833, 2621
SspI	AATATT	1 cut(s)	171
SspMI	CTAG	5 cut(s)	224, 684, 936, 1562, 2015
StyD4I	CCNGG	2 cut(s)	316, 657
StyI	CCWWGG	2 cut(s)	108, 217
SwaI	ATTTAAAT	1 cut(s)	2580
TaaI	ACNGT	6 cut(s)	529, 898, 1649, 2220, 2674, 2731
TaiI	ACGT	6 cut(s)	1275, 1283, 1932, 2359, 2395, 2535
TaqI	TCGA	5 cut(s)	507, 730, 1005, 1333, 2797
TatI	WGTACW	1 cut(s)	57
TauI	GCSGC	2 cut(s)	136, 164
Tru1I	TTAA	8 cut(s)	501, 969, 990, 1242, 1758, 1986, 2051, 2579
Tru9I	TTAA	8 cut(s)	501, 969, 990, 1242, 1758, 1986, 2051, 2579
TscAI	CASTG	8 cut(s)	490, 618, 868, 1180, 1501, 1654, 1696, 1713
TseFI	GTSAC	1 cut(s)	1829
Tsp45I	GTSAC	1 cut(s)	1829
TspGWI	ACGGA	5 cut(s)	480, 967, 1817, 2476, 2596
TspRI	CASTG	8 cut(s)	490, 618, 868, 1180, 1501, 1654, 1696, 1713
Van91I	CCANNNNNTGG	1 cut(s)	1273
Vha464I	CTTAAG	2 cut(s)	1985, 2050
VpaK11BI	GGWCC	4 cut(s)	416, 827, 1170, 1724
XagI	CCTNNNNNAGG	1 cut(s)	1076
XapI	RAATTY	9 cut(s)	1014, 1238, 1387, 1450, 1484, 1547, 2525, 2645, 2788
XbaI	TCTAGA	2 cut(s)	1561, 2014
XceI	RCATGY	3 cut(s)	471, 626, 1605
XcmI	CCANNNNNNNNNTGG	1 cut(s)	324
XmiI	GTMKAC	1 cut(s)	1182
XmnI	GAANNNNTTC	2 cut(s)	171, 479
XspI	CTAG	5 cut(s)	224, 684, 936, 1562, 2015
Zsp2I	ATGCAT	3 cut(s)	1603, 1607, 2430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.