Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0008418

Physical Location & Seq

Genomic Coordinates Reverse (-)

25834999 .. 25842334

Gene Structure 7336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1168300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4782 bp

ATGCCGTTGACAAGGTACCAGATAAGGAACGAGTACGGCTTGGCCGATCCGGAATTGTACAGAGCAGCCGATAGGGATGATCCGGAGGCTCTACTGGAAGGCGTCGCCATGGCCGGCCTCGTCGGTGTTTTGCGGCAGCTCGGCGACCTTGCTGAGTTTGCCGCTGAAATATTTCATGACTTGCACGAAGAAGTAATGGCAACCGCTACACGAGGCCATGGTCTAGTGGTTCGTGTCCAACAGCTTGAAGCGGACTTTCCCCCAATTGAGAAGGCGCTTCTATCTCAAACCAATCATTCTTCCTTCTTTTCCAATCCAGGGGTTGACTGGCATCCTAATCTGCATTCTGAACAGAATATGATCGCTCGTGGAGACTTACCTCGCTTTGTAATGGATTCTTATGAAGAATGCCGTGGTCCTCCTCAGCTGTTCCTTTTGGACAAGTTTGATGTTGCTGGAGCTGGGGCATGTTTGAAGCGGTACACTGATCCGTCATTCTTTAAAGTTGCATCAACATCTTCAATAACAGTAGAGATGCAGAGAGAAAAGAAAACCCGTAAAGTGAAGAAGAAAGGATCCCGCTGGAGGAATGGGGAAACCCCAGAAGTTTCAATGACATCACATGCCAAGTCAAATGCCAAACTGCATGAGTTGTTCCTGGAGGAGCGTATTGAGAATCGTTCTAGTGATCCTGCACATCGTGTGAAATTGAAGAAAAGGCATTTGAATGGATCAGCAGCTGACTCAAAAACTGGGAAAAGTTACATGAAGACATTTCTGGAGACTCTTTCACCAGAACGCAAACTTATTTGCGAAACTTCTGTTGGTCCACCACTCTTGAGATTGACCTTAGATGATAGTAGTGAGCCAGACCTTAGAATACTTGACATCACTACGGTAAGTCCTGCTGAAATGTCCCCAGAAAGGAAAAGTGCTAGCTCTTCACCTGACGTCCATGAAGATATATTTAAACCATCCGTGGATGGATTTAATAGGGGGGGTTTCGATAGAGAAATTCCAGAGGGGTCTGAACCAAACTCTGATGTTGAGACAAATGAAAATGATTCCAACCTTCATCAGGTGACAGCTGATAAACAATTAGCAGTTGGTGGAGAACATAAAACTGAAGGCAGCATGGAGGGGTCCACCCCCTCCAGTTCTGATGATAGGACCAGTGAGGTAGACAATTACATGGATGCTCTTGCAACTTTGGAATCAGAAATGGAAACTGACAATGAATTTAAACCTAAGAACAATCTACGCTTCCAGAACGTGGAAACATACGGGACGGATTCTGATGCAAATGAGGAGGAACATCTGGAGCTTCAAACTCGATTTTCGGATTCTCAATCAATTGGAAACTCCTCTACATCGGATGATGGGAAGAATTCATTTGAAAAAGATACAGCCAGTTTTTCGCACTCTGATAGTCTAAGCAATTTGGTTGAGAATTCACCATCAGAGTGTGATGGAGCAGCTAAAGAATTCCCTTCCACTGAAACCTGTGGAGCTGAGATTTTTGAGATGTCATCCAACCAGAAATCTGAATTCGTGGAGTCTCTAGAAGCCACAACAAAGGAGCGGGTGGTGTCTCATAATGCATGCATTGTGGAAGACATAATCCCTGATTCTGGAGATACATCTTACAGTGCATTTGTTAGGGATATGAGTCCTACGCTACACTCAGACCCTGGAGCAAACTCGCCAGTGGTATCATTGGCCGGACCTGTGTTAGATGATAATACCTCTGACGAAATTAAAGTTGATTGTAAACCATTAGACATTGACGAAAATGAGACAAATCTGGATAATTCTCTGCCTGTTGTCCGTGACTCCCAGACTAATGATGCTTCACCAAGCCATCCCATTGATGAGCCAGACATGGAAGATTTAGGTTTCAGTTCTGATGCTTCGCCACATTTGTCAAACGTTGAAGAGCCTGCTTCTGAAGATCAAAGTAGAAATAATGATGTGAATAAAATACTTCAGATACAATGTGCAGATGAAGATTCTCTAGAAAGCTTTGCCAGAAAGATTGATTCACCACGCTTAAGTATTTCATCCACTGAAGAGCAGCTTTCCTCAGCCCTGCCAGAAGAACAAATATCTTCAGTCAACTCTGAAGTTGTACCGTTTGTGGTGGATGCTGCACGGAGTCATATCTCAGAAGAGCCTGTAGTGGGTGCTCCACAGACACATGGCCTAATAGATCAGCAGGATGCTTGGCAGGCACATGGTCTAACAGAGCAGCAGGATGCTCCACATAGACGTGGCCTAACAGAGCAGCAGGATGCTCCCCAGATGCATGGCCTAATAGAGCAGCAATTATCTGATTTAGATGAGGATGTTCCCCAACTTGAATCCGTCAAAGAAGAAGCGGGTATTCCACATTATGAAGAAAAATTCAATGTAGAAGAGAGATTTAGTGCCGTGGATGACGATGAATTATCTGATTTAAATGAGTATGTTCCCCAACTTGAATCCGTCAAAGCAGAAGCGGGTATTCCGCATTATGAAGAAAAATTCAATGTAGAAGAGAGATTTAGTACCGTGGATGATGATGAATTACAATTATTCACAAGCGATGCTGATGTAGGAGGTGATACCGTTTCTGTGGAACTTCCATCTAATTGTCCAACTTTCATAGGCCATGAAGATCATGTGAATTCAGATGATCTGGTACCTGAAACACTAAATGTAGAAACTGCAGCTGTGCCCTCTGCTGCTGTTGCCCAACCTGATAATGACGTCAATGATGTTAGTTATTCATCTCCAAATGCAATTTCTTCTCCACCAAGGAACTTTATAAATTTGCATGAATCTCTTCCTGGATTTGGGGATTTCCACGAGAATGAATCGGAACTGAATGAAGTTTCTCCAGAATCTGTCATAGACTCAGAAGTGCAAATGGAAGCAAGTAAACAAGATGTTTCTCCGGATTCAGAATCTAACTCAAGTCAAGCAGTTACTCATGACCATTCCAGTTCAAAAGCATCTGATGATGGTCATAATTTCTCTCAGGATGAACAGACTGAGAACAGTTTGGCTGTGCATGATGTCCCTGCAGAATCAAAACCAAGCGAATCAACTACTTATGAACATTCTGGTTCAAAAGTATCTGATTATGGTCATAATTTCTCTCTGGATGAACAAACTGAAAGCAGTTTGGCTGTTGGTGATGTGACCATAACGTCAGCAACTTTAGAAAATACGGAAGTTGTGTCTTCACCTACCTGCTACCTCCCAGAGCCTGAAACTAGTTTGGACAATTCAGTGGATTTGCAAGCAAACCAAGTTGATATCGGATATTTGCCAAGAGATGGAGCAAGGGATCAGCCAGAAGCTGACTTAAAGCATTCTCTGGAGGTTCAATCTGATGAGTTTGATGTGGAAAGTTCGGATGAAGATCAAGCAAGCATCAACTTATCAAGTCTTCAATCTGCACAGGCAGGGTCTCAAAACCACATGGATTCGGAGAAATCCAACCAGTTACCATCTACGGAGCACATCAATCAGGAAGTATACTTGGATGCTTCCCTGGAATCTTATTCTGAATATCTCCCAAGCCAAGCTTTAACATCAGAGTTCTTACCAGAATCATCAGGCCTGGAACTTGATGTTACGAAGCAAGCATTGGAACCATTTACCCTTCCTAGATCAGTCCTGCCCCCTGAAGGTACTGTGGTCAATCTGGAAGACATGCCACCATTGCCACCTTTACCACCAATGCAATGGAGGATGGGAAAACAACACTCTTCCCTTTTTTCACAGAGAGAATCGGTTGGAGTTAGCCAGGATTCTTTACTGCCAATACAGCCGTCGGTACCTGATGAGAAAGCTCAATTTGATATGCCAGCACCACAGAGAGGTGTGCTGCCGCCCCAGAACCCATTTTTGCCTCCCACGTCTGAAGAAGGCGAGAAGTTCCAACATGTTTCTGAACCTTTAATTGGCAATATGGTGCATCCTGCCCCGTATTCATTGCAGTTACCAGCCATGGTTAATGATGCTAATCTTCAATATAATTTCCCTGACTTAGGGGGAACACAATTCTCAAACCCATTTTTGTCGTTACCAGAGGTTTCTGATGACAGGCCTGGAATTAATCACTTTGCTTCAGTGGGAGAAAAAATTCAGACTGGTTCAAATCCATTCACTGGACCAAGCTCTGAATGTACAACTTCTACACATGACCCTGAATCTTCTCATGGATCTATTATCCAGCCTGTACAGCAGATAACACCGGAGACAGGTATCGAGCCTAAGGTGCTTCAACATTCACTGAAAAATTCAGAATCGGAACAAGAACCTCTTTCCACATCCGCGACAGCTCCAACAATGGTAGAGCAGCCTCAGCATTGCTTACCAACATCAGAGGGAGAAATATCATGGTCATACAATAATTCTGCTGTAATGTCAGACTATGAAGTTGGAAGGTCTAATGGAGTTCCAGTTACTAAGCTCCCTCGTCCTAGAAATCCCCTCATCGATGCTGTTGCTGCTCATGGTCAAAGCAAGTTGAGAAAGGTAACCGAACGAGTTCGGCCTCAGGTTGAACCTGAGGTAGATGAAAGAGATTCATTGCTGCAACAGATAAGAACTAAGTCCTTCAACTTGAAGCCTGCAATGGTGACAAGATCTTCAACGGTGACAAGACCCAGCATTCAGGGCCCGGCAAGAAACTTGAGGGTTGCTGCTATCTTAGAGAGAGCGAGTGCAATTCGCCAGGCATGTGCAGGAAGTGATGAAGATGACGATGATGATGGTTGGAGTGATAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010638 GO:0016020 GO:0016043 GO:0030029 GO:0030036 GO:0030154 GO:0030832 GO:0030833 GO:0030838 GO:0031209 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0032991 GO:0033043 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048468 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051125 GO:0051127 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0090558 GO:0090626 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1594

Amino Acids

174.69

Weight (kDa)

4.39

Isoelectric Point (pI)

56.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008418)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38440
fragaria_vesca	FvH4_3g27480 FvH4_6g10280 FvH4_6g10280
malus_domestica	MD04G1168300.v1.1 MD12G1181800.v1.1
prunus_persica	Prupe.6G286500_v2.0.a1
pyrus_communis	pycom04g14930 pycom12g16620 pycom12g17100
rosa_chinensis	RchiOBHm_Chr3g0461031 RchiOBHm_Chr3g0461041
rosa_laevigata	RLG00000024956
rosa_multiflora	Rmu_co8405745.1_g000001 Rmu_co8433481.1_g000001
rosa_roxburghii	Rroxscaffold_6G00418920
rosa_rugosa	Rorug03G0048000 Rorug03G0048000
rosa_samantha	Rh3AG105300 Rh3BG109300 Rh3CG110900 Rh3DG111000
rosa_wichuraiana	Rw3G009020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2807
AasI	GACNNNNNNGTC	1 cut(s)	3190
AatII	GACGTC	2 cut(s)	954, 2751
Acc36I	ACCTGC	1 cut(s)	3242
Acc65I	GGTACC	3 cut(s)	15, 2680, 3823
AccB1I	GGYRCC	3 cut(s)	15, 2680, 3823
AccB7I	CCANNNNNTGG	3 cut(s)	1273, 3320, 4157
AccBSI	CCGCTC	1 cut(s)	1582
AccI	GTMKAC	2 cut(s)	1182, 3522
AccII	CGCG	1 cut(s)	4325
AccIII	TCCGGA	3 cut(s)	49, 82, 2935
AclI	AACGTT	1 cut(s)	1929
AclWI	GGATC	9 cut(s)	41, 74, 482, 570, 583, 683, 739, 3339, 4219
AcoI	YGGCCR	3 cut(s)	42, 111, 1719
AcuI	CTGAAG	9 cut(s)	1146, 1968, 1970, 2088, 2094, 2142, 3693, 3930, 4101
AcyI	GRCGYC	3 cut(s)	102, 951, 2748
AdeI	CACNNNGTG	1 cut(s)	701
AflII	CTTAAG	1 cut(s)	2050
AflIII	ACRYGT	1 cut(s)	3931
AhlI	ACTAGT	1 cut(s)	3257
AjiI	CACGTC	2 cut(s)	2270, 3906
AjnI	CCWGG	9 cut(s)	316, 657, 1690, 2827, 3537, 3606, 3792, 4096, 4725
AjuI	GAANNNNNNNTTGG	8 cut(s)	807, 839, 2767, 2799, 3617, 3649, 3933, 3965
Alw21I	GWGCWC	2 cut(s)	2188, 3507
Alw26I	GTCTC	8 cut(s)	366, 776, 1043, 1563, 1596, 1790, 3459, 4241
AlwI	GGATC	9 cut(s)	41, 74, 482, 570, 583, 683, 739, 3339, 4219
AlwNI	CAGNNNCTG	5 cut(s)	740, 1691, 2885, 3251, 3344
Aor13HI	TCCGGA	3 cut(s)	49, 82, 2935
ApaI	GGGCCC	1 cut(s)	4673
AseI	ATTAAT	1 cut(s)	4104
Asp700I	GAANNNNTTC	4 cut(s)	171, 2823, 4131, 4539
Asp718I	GGTACC	3 cut(s)	15, 2680, 3823
AspLEI	GCGC	1 cut(s)	277
AspS9I	GGNCC	8 cut(s)	416, 827, 1143, 1170, 1724, 4160, 4669, 4670
AsuC2I	CCSGG	1 cut(s)	4673
AsuNHI	GCTAGC	1 cut(s)	935
AvaII	GGWCC	6 cut(s)	416, 827, 1143, 1170, 1724, 4160
AxyI	CCTNAGG	3 cut(s)	4263, 4548, 4560
BaeGI	GKGCMC	2 cut(s)	2718, 4673
BaeI	ACNNNNGTAYC	2 cut(s)	3669, 3702
BamHI	GGATCC	1 cut(s)	575
BanI	GGYRCC	3 cut(s)	15, 2680, 3823
BanII	GRGCYC	1 cut(s)	4673
BauI	CACGAG	3 cut(s)	210, 366, 2846
BbsI	GAAGAC	5 cut(s)	776, 1620, 3216, 3425, 3702
Bbv12I	GWGCWC	2 cut(s)	2188, 3507
BbvCI	CCTCAGC	3 cut(s)	423, 2083, 4353
BceAI	ACGGC	4 cut(s)	52, 396, 2414, 3802
BcgI	CGANNNNNNTGC	2 cut(s)	4478, 4512
BciT130I	CCWGG	9 cut(s)	318, 659, 1692, 2829, 3539, 3608, 3794, 4098, 4727
BcnI	CCSGG	1 cut(s)	4673
BcoDI	GTCTC	8 cut(s)	366, 776, 1043, 1563, 1596, 1790, 3459, 4241
BcuI	ACTAGT	1 cut(s)	3257
BfaI	CTAG	8 cut(s)	224, 684, 936, 1562, 2015, 3258, 3654, 4473
BfmI	CTRYAG	3 cut(s)	2175, 2706, 3063
BfoI	RGCGCY	1 cut(s)	278
BfrI	CTTAAG	1 cut(s)	2050
BfuAI	ACCTGC	1 cut(s)	3242
BglII	AGATCT	1 cut(s)	4637
Bme18I	GGWCC	6 cut(s)	416, 827, 1143, 1170, 1724, 4160
BmgBI	CACGTC	2 cut(s)	2270, 3906
BmgT120I	GGNCC	8 cut(s)	416, 827, 1143, 1170, 1724, 4160, 4669, 4670
BmiI	GGNNCC	7 cut(s)	17, 577, 1144, 2682, 3639, 3825, 4671
BmrI	ACTGGG	1 cut(s)	762
BmtI	GCTAGC	1 cut(s)	939
BmuI	ACTGGG	1 cut(s)	762
BpiI	GAAGAC	5 cut(s)	776, 1620, 3216, 3425, 3702
Bpu10I	CCTNAGC	3 cut(s)	423, 2083, 4353
BpuEI	CTTGAG	3 cut(s)	859, 2938, 4705
BpuMI	CCSGG	1 cut(s)	4673
Bsa29I	ATCGAT	1 cut(s)	4488
BsaBI	GATNNNNATC	2 cut(s)	3405, 4011
BsaHI	GRCGYC	3 cut(s)	102, 951, 2748
BsaI	GGTCTC	1 cut(s)	3459
BsaWI	WCCGGW	4 cut(s)	49, 82, 2935, 4243
BsaXI	ACNNNNNCTCC	2 cut(s)	4437, 4467
Bse118I	RCCGGY	1 cut(s)	113
Bse21I	CCTNAGG	3 cut(s)	4263, 4548, 4560
Bse3DI	GCAATG	6 cut(s)	3707, 3737, 3980, 4357, 4580, 4632
Bse8I	GATNNNNATC	2 cut(s)	3405, 4011
BseAI	TCCGGA	3 cut(s)	49, 82, 2935
BseBI	CCWGG	9 cut(s)	318, 659, 1692, 2829, 3539, 3608, 3794, 4098, 4727
BseCI	ATCGAT	1 cut(s)	4488
BseJI	GATNNNNATC	2 cut(s)	3405, 4011
BseMI	GCAATG	6 cut(s)	3707, 3737, 3980, 4357, 4580, 4632
BseRI	GAGGAG	4 cut(s)	411, 677, 1322, 1354
BseSI	GKGCMC	2 cut(s)	2718, 4673
BseYI	CCCAGC	2 cut(s)	461, 4658
BsgI	GTGCAG	5 cut(s)	678, 2019, 2133, 3426, 4755
Bsh1236I	CGCG	1 cut(s)	4325
BshNI	GGYRCC	3 cut(s)	15, 2680, 3823
BshVI	ATCGAT	1 cut(s)	4488
BsiHKAI	GWGCWC	2 cut(s)	2188, 3507
BsiSI	CCGG	7 cut(s)	50, 83, 114, 1722, 2936, 4244, 4673
BslFI	GGGAC	3 cut(s)	901, 1300, 3044
BsmAI	GTCTC	8 cut(s)	366, 776, 1043, 1563, 1596, 1790, 3459, 4241
BsmFI	GGGAC	3 cut(s)	901, 1300, 3044
BsmI	GAATGC	4 cut(s)	343, 413, 3355, 4662
Bso31I	GGTCTC	1 cut(s)	3459
Bsp120I	GGGCCC	1 cut(s)	4669
Bsp1286I	GDGCHC	4 cut(s)	2188, 2718, 3507, 4673
Bsp13I	TCCGGA	3 cut(s)	49, 82, 2935
Bsp1407I	TGTACA	3 cut(s)	57, 4175, 4228
Bsp19I	CCATGG	3 cut(s)	108, 217, 3996
BspDI	ATCGAT	1 cut(s)	4488
BspEI	TCCGGA	3 cut(s)	49, 82, 2935
BspFNI	CGCG	1 cut(s)	4325
BspHI	TCATGA	2 cut(s)	175, 2971
BspLI	GGNNCC	7 cut(s)	17, 577, 1144, 2682, 3639, 3825, 4671
BspMAI	CTGCAG	2 cut(s)	2710, 3067
BspMI	ACCTGC	1 cut(s)	3242
BspOI	GCTAGC	1 cut(s)	939
BspPI	GGATC	9 cut(s)	41, 74, 482, 570, 583, 683, 739, 3339, 4219
BspQI	GCTCTTC	4 cut(s)	946, 1929, 2064, 2163
BspT107I	GGYRCC	3 cut(s)	15, 2680, 3823
BspTI	CTTAAG	1 cut(s)	2050
BspTNI	GGTCTC	1 cut(s)	3459
BsrBI	CCGCTC	1 cut(s)	1582
BsrDI	GCAATG	6 cut(s)	3707, 3737, 3980, 4357, 4580, 4632
BsrFI	RCCGGY	1 cut(s)	113
BsrGI	TGTACA	3 cut(s)	57, 4175, 4228
BssAI	RCCGGY	1 cut(s)	113
BssNAI	GTATAC	1 cut(s)	3523
BssNI	GRCGYC	3 cut(s)	102, 951, 2748
BssSI	CACGAG	3 cut(s)	210, 366, 2846
BssT1I	CCWWGG	4 cut(s)	108, 217, 2795, 3996
Bst1107I	GTATAC	1 cut(s)	3523
Bst2BI	CACGAG	3 cut(s)	210, 366, 2846
Bst2UI	CCWGG	9 cut(s)	318, 659, 1692, 2829, 3539, 3608, 3794, 4098, 4727
Bst4CI	ACNGT	9 cut(s)	529, 898, 1649, 2133, 2551, 2608, 3041, 3682, 4648
Bst6I	CTCTTC	8 cut(s)	946, 1929, 2064, 2163, 2409, 2529, 2829, 3760
BstACI	GRCGYC	3 cut(s)	102, 951, 2748
BstAFI	CTTAAG	1 cut(s)	2050
BstAUI	TGTACA	3 cut(s)	57, 4175, 4228
BstDSI	CCRYGG	7 cut(s)	108, 217, 412, 978, 2430, 2550, 3996
BstEII	GGTNACC	1 cut(s)	4528
BstENI	CCTNNNNNAGG	2 cut(s)	1076, 4035
BstFNI	CGCG	1 cut(s)	4325
BstH2I	RGCGCY	1 cut(s)	278
BstHHI	GCGC	1 cut(s)	277
BstMAI	GTCTC	8 cut(s)	366, 776, 1043, 1563, 1596, 1790, 3459, 4241
BstNI	CCWGG	9 cut(s)	318, 659, 1692, 2829, 3539, 3608, 3794, 4098, 4727
BstNSI	RCATGY	6 cut(s)	471, 626, 1605, 3703, 3935, 4734
BstPI	GGTNACC	1 cut(s)	4528
BstSFI	CTRYAG	3 cut(s)	2175, 2706, 3063
BstSLI	GKGCMC	2 cut(s)	2718, 4673
BstUI	CGCG	1 cut(s)	4325
BstV2I	GAAGAC	5 cut(s)	776, 1620, 3216, 3425, 3702
BstX2I	RGATCY	3 cut(s)	575, 4211, 4637
BstXI	CCANNNNNNTGG	2 cut(s)	2306, 3732
BstYI	RGATCY	3 cut(s)	575, 4211, 4637
BstZ17I	GTATAC	1 cut(s)	3523
Bsu15I	ATCGAT	1 cut(s)	4488
Bsu36I	CCTNAGG	3 cut(s)	4263, 4548, 4560
BsuTUI	ATCGAT	1 cut(s)	4488
BtgI	CCRYGG	7 cut(s)	108, 217, 412, 978, 2430, 2550, 3996
BtgZI	GCGATG	1 cut(s)	2598
BtrI	CACGTC	2 cut(s)	2270, 3906
BveI	ACCTGC	1 cut(s)	3242
CaiI	CAGNNNCTG	5 cut(s)	740, 1691, 2885, 3251, 3344
CciI	TCATGA	2 cut(s)	175, 2971
CfoI	GCGC	1 cut(s)	277
Cfr10I	RCCGGY	1 cut(s)	113
Cfr13I	GGNCC	8 cut(s)	416, 827, 1143, 1170, 1724, 4160, 4669, 4670
ClaI	ATCGAT	1 cut(s)	4488
CseI	GACGC	1 cut(s)	91
CspCI	CAANNNNNGTGG	2 cut(s)	819, 854
DraI	TTTAAA	4 cut(s)	502, 970, 1243, 2457
DraIII	CACNNNGTG	1 cut(s)	701
DrdI	GACNNNNNNGTC	1 cut(s)	3190
DseDI	GACNNNNNNGTC	1 cut(s)	3190
EaeI	YGGCCR	3 cut(s)	42, 111, 1719
Eam1104I	CTCTTC	8 cut(s)	946, 1929, 2064, 2163, 2409, 2529, 2829, 3760
EarI	CTCTTC	8 cut(s)	946, 1929, 2064, 2163, 2409, 2529, 2829, 3760
Eco130I	CCWWGG	4 cut(s)	108, 217, 2795, 3996
Eco147I	AGGCCT	2 cut(s)	3606, 4096
Eco24I	GRGCYC	1 cut(s)	4673
Eco31I	GGTCTC	1 cut(s)	3459
Eco32I	GATATC	1 cut(s)	3301
Eco47I	GGWCC	6 cut(s)	416, 827, 1143, 1170, 1724, 4160
Eco57I	CTGAAG	9 cut(s)	1146, 1968, 1970, 2088, 2094, 2142, 3693, 3930, 4101
Eco81I	CCTNAGG	3 cut(s)	4263, 4548, 4560
Eco91I	GGTNACC	1 cut(s)	4528
EcoNI	CCTNNNNNAGG	2 cut(s)	1076, 4035
EcoO109I	RGGNCCY	1 cut(s)	4669
EcoO65I	GGTNACC	1 cut(s)	4528
EcoRI	GAATTC	5 cut(s)	1387, 1450, 1484, 1547, 2665
EcoRII	CCWGG	9 cut(s)	316, 657, 1690, 2827, 3537, 3606, 3792, 4096, 4725
EcoRV	GATATC	1 cut(s)	3301
EcoT14I	CCWWGG	4 cut(s)	108, 217, 2795, 3996
EcoT22I	ATGCAT	3 cut(s)	1603, 1607, 2307
EcoT38I	GRGCYC	1 cut(s)	4673
ErhI	CCWWGG	4 cut(s)	108, 217, 2795, 3996
FalI	AAGNNNNNCTT	6 cut(s)	2061, 2093, 3556, 3588, 4296, 4328
FaqI	GGGAC	3 cut(s)	901, 1300, 3044
FauI	CCCGC	4 cut(s)	587, 1575, 2371, 2491
FblI	GTMKAC	2 cut(s)	1182, 3522
FriOI	GRGCYC	1 cut(s)	4673
FseI	GGCCGGCC	1 cut(s)	117
FspBI	CTAG	8 cut(s)	224, 684, 936, 1562, 2015, 3258, 3654, 4473
GlaI	GCGC	1 cut(s)	276
GsaI	CCCAGC	2 cut(s)	465, 4662
HaeII	RGCGCY	1 cut(s)	278
HapII	CCGG	7 cut(s)	50, 83, 114, 1722, 2936, 4244, 4673
HgaI	GACGC	1 cut(s)	91
HhaI	GCGC	1 cut(s)	277
Hin1I	GRCGYC	3 cut(s)	102, 951, 2748
Hin6I	GCGC	1 cut(s)	275
HinP1I	GCGC	1 cut(s)	275
HincII	GTYRAC	3 cut(s)	9, 325, 2116
HindII	GTYRAC	3 cut(s)	9, 325, 2116
HindIII	AAGCTT	2 cut(s)	2020, 3570
HpaII	CCGG	7 cut(s)	50, 83, 114, 1722, 2936, 4244, 4673
Hpy99I	CGWCG	3 cut(s)	107, 125, 3823
HpyCH4III	ACNGT	9 cut(s)	529, 898, 1649, 2133, 2551, 2608, 3041, 3682, 4648
HpyCH4IV	ACGT	7 cut(s)	951, 1272, 1929, 2269, 2748, 3191, 3905
HpySE526I	ACGT	7 cut(s)	951, 1272, 1929, 2269, 2748, 3191, 3905
Hsp92I	GRCGYC	3 cut(s)	102, 951, 2748
HspAI	GCGC	1 cut(s)	275
Kpn2I	TCCGGA	3 cut(s)	49, 82, 2935
KpnI	GGTACC	3 cut(s)	19, 2684, 3827
KroI	GCCGGC	1 cut(s)	113
KroNI	GCCGGC	1 cut(s)	115
LguI	GCTCTTC	4 cut(s)	946, 1929, 2064, 2163
MaeI	CTAG	8 cut(s)	224, 684, 936, 1562, 2015, 3258, 3654, 4473
MaeII	ACGT	7 cut(s)	951, 1272, 1929, 2269, 2748, 3191, 3905
MbiI	CCGCTC	1 cut(s)	1582
MfeI	CAATTG	2 cut(s)	264, 1353
MflI	RGATCY	3 cut(s)	575, 4211, 4637
MhlI	GDGCHC	4 cut(s)	2188, 2718, 3507, 4673
MlyI	GAGTC	7 cut(s)	737, 778, 1565, 1678, 1826, 2164, 2888
Mph1103I	ATGCAT	3 cut(s)	1603, 1607, 2307
MroI	TCCGGA	3 cut(s)	49, 82, 2935
MroNI	GCCGGC	1 cut(s)	113
MroXI	GAANNNNTTC	4 cut(s)	171, 2823, 4131, 4539
MslI	CAYNNNNRTG	4 cut(s)	726, 1462, 2268, 2850
MspA1I	CMGCKG	6 cut(s)	164, 427, 582, 740, 1088, 2711
MspCI	CTTAAG	1 cut(s)	2050
MspI	CCGG	7 cut(s)	50, 83, 114, 1722, 2936, 4244, 4673
MunI	CAATTG	2 cut(s)	264, 1353
Mva1269I	GAATGC	4 cut(s)	343, 413, 3355, 4662
MvaI	CCWGG	9 cut(s)	318, 659, 1692, 2829, 3539, 3608, 3794, 4098, 4727
MvnI	CGCG	1 cut(s)	4325
NaeI	GCCGGC	1 cut(s)	115
NciI	CCSGG	1 cut(s)	4673
NcoI	CCATGG	3 cut(s)	108, 217, 3996
NgoMIV	GCCGGC	1 cut(s)	113
NheI	GCTAGC	1 cut(s)	935
NlaIV	GGNNCC	7 cut(s)	17, 577, 1144, 2682, 3639, 3825, 4671
NmeAIII	GCCGAG	1 cut(s)	120
NmuCI	GTSAC	5 cut(s)	1081, 1829, 3181, 4630, 4648
NsiI	ATGCAT	3 cut(s)	1603, 1607, 2307
NspI	RCATGY	6 cut(s)	471, 626, 1605, 3703, 3935, 4734
PaeI	GCATGC	1 cut(s)	1605
PagI	TCATGA	2 cut(s)	175, 2971
PceI	AGGCCT	2 cut(s)	3606, 4096
PciI	ACATGT	1 cut(s)	3931
PciSI	GCTCTTC	4 cut(s)	946, 1929, 2064, 2163
PcsI	WCGNNNNNNNCGW	1 cut(s)	42
PctI	GAATGC	4 cut(s)	343, 413, 3355, 4662
PdiI	GCCGGC	1 cut(s)	115
PdmI	GAANNNNTTC	4 cut(s)	171, 2823, 4131, 4539
PflMI	CCANNNNNTGG	3 cut(s)	1273, 3320, 4157
PfoI	TCCNGGA	2 cut(s)	657, 2827
PleI	GAGTC	7 cut(s)	737, 778, 1564, 1677, 1826, 2163, 2888
PpsI	GAGTC	7 cut(s)	737, 778, 1564, 1677, 1826, 2163, 2888
PscI	ACATGT	1 cut(s)	3931
PshBI	ATTAAT	1 cut(s)	4104
PsiI	TTATAA	1 cut(s)	2807
Psp1406I	AACGTT	1 cut(s)	1929
Psp6I	CCWGG	9 cut(s)	316, 657, 1690, 2827, 3537, 3606, 3792, 4096, 4725
PspEI	GGTNACC	1 cut(s)	4528
PspFI	CCCAGC	2 cut(s)	461, 4658
PspGI	CCWGG	9 cut(s)	316, 657, 1690, 2827, 3537, 3606, 3792, 4096, 4725
PspN4I	GGNNCC	7 cut(s)	17, 577, 1144, 2682, 3639, 3825, 4671
PspOMI	GGGCCC	1 cut(s)	4669
PspPI	GGNCC	8 cut(s)	416, 827, 1143, 1170, 1724, 4160, 4669, 4670
PstI	CTGCAG	2 cut(s)	2710, 3067
PstNI	CAGNNNCTG	5 cut(s)	740, 1691, 2885, 3251, 3344
PsuI	RGATCY	3 cut(s)	575, 4211, 4637
PvuII	CAGCTG	4 cut(s)	427, 740, 1088, 2711
RigI	GGCCGGCC	1 cut(s)	117
RseI	CAYNNNNRTG	4 cut(s)	726, 1462, 2268, 2850
SapI	GCTCTTC	4 cut(s)	946, 1929, 2064, 2163
Sau96I	GGNCC	8 cut(s)	416, 827, 1143, 1170, 1724, 4160, 4669, 4670
SchI	GAGTC	7 cut(s)	737, 778, 1565, 1678, 1826, 2164, 2888
SduI	GDGCHC	4 cut(s)	2188, 2718, 3507, 4673
SfcI	CTRYAG	3 cut(s)	2175, 2706, 3063
SinI	GGWCC	6 cut(s)	416, 827, 1143, 1170, 1724, 4160
SmiI	ATTTAAAT	1 cut(s)	2457
SmiMI	CAYNNNNRTG	4 cut(s)	726, 1462, 2268, 2850
SmlI	CTYRAG	4 cut(s)	838, 2050, 2953, 4684
SmoI	CTYRAG	4 cut(s)	838, 2050, 2953, 4684
SpeI	ACTAGT	1 cut(s)	3257
SphI	GCATGC	1 cut(s)	1605
SseBI	AGGCCT	2 cut(s)	3606, 4096
SspI	AATATT	1 cut(s)	171
SspMI	CTAG	8 cut(s)	224, 684, 936, 1562, 2015, 3258, 3654, 4473
StuI	AGGCCT	2 cut(s)	3606, 4096
StyI	CCWWGG	4 cut(s)	108, 217, 2795, 3996
SwaI	ATTTAAAT	1 cut(s)	2457
TaaI	ACNGT	9 cut(s)	529, 898, 1649, 2133, 2551, 2608, 3041, 3682, 4648
TaiI	ACGT	7 cut(s)	954, 1275, 1932, 2272, 2751, 3194, 3908
TaqI	TCGA	4 cut(s)	1005, 1333, 4257, 4488
TatI	WGTACW	3 cut(s)	57, 4175, 4228
TauI	GCSGC	3 cut(s)	136, 164, 3880
TseFI	GTSAC	5 cut(s)	1081, 1829, 3181, 4630, 4648
Tsp45I	GTSAC	5 cut(s)	1081, 1829, 3181, 4630, 4648
TspGWI	ACGGA	9 cut(s)	480, 967, 1304, 1817, 2167, 2353, 2473, 3227, 3515
Van91I	CCANNNNNTGG	3 cut(s)	1273, 3320, 4157
Vha464I	CTTAAG	1 cut(s)	2050
VpaK11BI	GGWCC	6 cut(s)	416, 827, 1143, 1170, 1724, 4160
VspI	ATTAAT	1 cut(s)	4104
XagI	CCTNNNNNAGG	2 cut(s)	1076, 4035
XbaI	TCTAGA	2 cut(s)	1561, 2014
XceI	RCATGY	6 cut(s)	471, 626, 1605, 3703, 3935, 4734
XcmI	CCANNNNNNNNNTGG	2 cut(s)	324, 3729
XmiI	GTMKAC	2 cut(s)	1182, 3522
XmnI	GAANNNNTTC	4 cut(s)	171, 2823, 4131, 4539
XspI	CTAG	8 cut(s)	224, 684, 936, 1562, 2015, 3258, 3654, 4473
ZraI	GACGTC	2 cut(s)	952, 2749
Zsp2I	ATGCAT	3 cut(s)	1603, 1607, 2307

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.