regulation of actin nucleation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G38440 |
| fragaria_vesca | FvH4_3g27480 FvH4_6g10280 FvH4_6g10280 |
| malus_domestica | MD04G1168300.v1.1 MD12G1181800.v1.1 |
| prunus_persica | Prupe.6G286500_v2.0.a1 |
| pyrus_communis | pycom04g14930 pycom12g16620 pycom12g17100 |
| rosa_chinensis | RchiOBHm_Chr3g0461031 RchiOBHm_Chr3g0461041 |
| rosa_laevigata | RLG00000024956 |
| rosa_multiflora | Rmu_co8405745.1_g000001 Rmu_co8433481.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00418920 |
| rosa_rugosa | Rorug03G0048000 Rorug03G0048000 |
| rosa_samantha | Rh3AG105300 Rh3BG109300 Rh3CG110900 Rh3DG111000 |
| rosa_wichuraiana | Rw3G009020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1659, 2451, 2744 |
| AatII | GACGTC | 1 cut(s) | 2688 |
| Acc36I | ACCTGC | 3 cut(s) | 3179, 3292, 4168 |
| AccB1I | GGYRCC | 1 cut(s) | 2617 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1162, 3257, 4100 |
| AccBSI | CCGCTC | 1 cut(s) | 727 |
| AciI | CCGC | 7 cut(s) | 25, 96, 370, 725, 2311, 2435, 3002 |
| AclI | AACGTT | 2 cut(s) | 1830, 3292 |
| AcoI | YGGCCR | 2 cut(s) | 3, 4453 |
| AcuI | CTGAAG | 9 cut(s) | 1035, 1869, 1871, 1995, 2130, 3114, 3636, 3873, 4044 |
| AcvI | CACGTG | 1 cut(s) | 2258 |
| AcyI | GRCGYC | 1 cut(s) | 2685 |
| AfaI | GTAC | 7 cut(s) | 374, 588, 1750, 2118, 3381, 3965, 4212 |
| AflIII | ACRYGT | 3 cut(s) | 2221, 2255, 3874 |
| AjiI | CACGTC | 1 cut(s) | 3849 |
| AjnI | CCWGG | 9 cut(s) | 208, 549, 1516, 1579, 2581, 2764, 3041, 3543, 4671 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2704, 2736, 3554, 3586 |
| AleI | CACNNNNGTG | 1 cut(s) | 788 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2134, 2166 |
| Alw21I | GWGCWC | 2 cut(s) | 2382, 3444 |
| Alw26I | GTCTC | 6 cut(s) | 258, 668, 935, 1679, 2246, 3396 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1580, 1616, 2822, 3188, 3281 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 63, 1884, 3495, 4485 |
| AspS9I | GGNCC | 6 cut(s) | 308, 1032, 1613, 2484, 4103, 4616 |
| AsuC2I | CCSGG | 1 cut(s) | 3476 |
| AsuNHI | GCTAGC | 1 cut(s) | 827 |
| AvaII | GGWCC | 5 cut(s) | 308, 1032, 1613, 4103, 4616 |
| AxyI | CCTNAGG | 3 cut(s) | 4206, 4494, 4506 |
| BaeGI | GKGCMC | 2 cut(s) | 2622, 2655 |
| BalI | TGGCCA | 1 cut(s) | 4455 |
| BamHI | GGATCC | 1 cut(s) | 467 |
| BanI | GGYRCC | 1 cut(s) | 2617 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2050, 2082 |
| BauI | CACGAG | 2 cut(s) | 77, 102 |
| BbrPI | CACGTG | 1 cut(s) | 2258 |
| BbsI | GAAGAC | 5 cut(s) | 1506, 3153, 3362, 3645, 4196 |
| Bbv12I | GWGCWC | 2 cut(s) | 2382, 3444 |
| BbvCI | CCTCAGC | 1 cut(s) | 4299 |
| BceAI | ACGGC | 2 cut(s) | 288, 2079 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 35, 69, 3978, 4012 |
| BciT130I | CCWGG | 9 cut(s) | 210, 551, 1518, 1581, 2583, 2766, 3043, 3545, 4673 |
| BciVI | GTATCC | 1 cut(s) | 1543 |
| BclI | TGATCA | 1 cut(s) | 252 |
| BcnI | CCSGG | 1 cut(s) | 3476 |
| BcoDI | GTCTC | 6 cut(s) | 258, 668, 935, 1679, 2246, 3396 |
| BfaI | CTAG | 9 cut(s) | 116, 828, 1448, 1667, 2481, 3597, 4247, 4386, 4419 |
| BfmI | CTRYAG | 4 cut(s) | 627, 786, 2163, 3299 |
| BfuAI | ACCTGC | 3 cut(s) | 3179, 3292, 4168 |
| BfuI | GTATCC | 1 cut(s) | 1543 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 15 |
| BglII | AGATCT | 2 cut(s) | 2477, 4583 |
| BlpI | GCTNAGC | 1 cut(s) | 3315 |
| BmcAI | AGTACT | 2 cut(s) | 1750, 2118 |
| Bme18I | GGWCC | 5 cut(s) | 308, 1032, 1613, 4103, 4616 |
| BmgBI | CACGTC | 1 cut(s) | 3849 |
| BmgT120I | GGNCC | 6 cut(s) | 308, 1032, 1613, 2484, 4103, 4616 |
| BmiI | GGNNCC | 5 cut(s) | 94, 469, 1033, 2619, 4617 |
| BmrI | ACTGGG | 1 cut(s) | 654 |
| BmtI | GCTAGC | 1 cut(s) | 831 |
| BmuI | ACTGGG | 1 cut(s) | 654 |
| BpiI | GAAGAC | 5 cut(s) | 1506, 3153, 3362, 3645, 4196 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1984, 4299 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3315 |
| BpuEI | CTTGAG | 3 cut(s) | 751, 2875, 4651 |
| BpuMI | CCSGG | 1 cut(s) | 3476 |
| BsaAI | YACGTR | 1 cut(s) | 2258 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3954 |
| BsaHI | GRCGYC | 1 cut(s) | 2685 |
| BsaI | GGTCTC | 1 cut(s) | 3396 |
| BsaWI | WCCGGW | 2 cut(s) | 575, 3763 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1457, 1487, 2134, 2164, 4059, 4089, 4383, 4413 |
| Bse118I | RCCGGY | 1 cut(s) | 5 |
| Bse21I | CCTNAGG | 3 cut(s) | 4206, 4494, 4506 |
| Bse3DI | GCAATG | 5 cut(s) | 3650, 3680, 3904, 3923, 4578 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3954 |
| BseBI | CCWGG | 9 cut(s) | 210, 551, 1518, 1581, 2583, 2766, 3043, 3545, 4673 |
| BseJI | GATNNNNATC | 1 cut(s) | 3954 |
| BseMI | GCAATG | 5 cut(s) | 3650, 3680, 3904, 3923, 4578 |
| BseMII | CTCAG | 8 cut(s) | 1389, 1587, 2223, 2847, 3144, 3306, 4313, 4508 |
| BseRI | GAGGAG | 4 cut(s) | 303, 569, 1211, 1240 |
| BseSI | GKGCMC | 2 cut(s) | 2622, 2655 |
| BseYI | CCCAGC | 3 cut(s) | 353, 3462, 4604 |
| BsgI | GTGCAG | 2 cut(s) | 2121, 4193 |
| BshNI | GGYRCC | 1 cut(s) | 2617 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2382, 3444 |
| BsiSI | CCGG | 5 cut(s) | 6, 576, 3476, 3764, 4619 |
| BslFI | GGGAC | 3 cut(s) | 793, 1700, 2981 |
| BsmAI | GTCTC | 6 cut(s) | 258, 668, 935, 1679, 2246, 3396 |
| BsmFI | GGGAC | 3 cut(s) | 793, 1700, 2981 |
| BsmI | GAATGC | 3 cut(s) | 305, 2099, 4608 |
| Bso31I | GGTCTC | 1 cut(s) | 3396 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2382, 2622, 2655, 3444 |
| Bsp1407I | TGTACA | 1 cut(s) | 3379 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3315 |
| Bsp19I | CCATGG | 3 cut(s) | 870, 2487, 3939 |
| BspACI | CCGC | 7 cut(s) | 25, 96, 370, 725, 2311, 2435, 3002 |
| BspCNI | CTCAG | 8 cut(s) | 1390, 1586, 2224, 2846, 3143, 3307, 4312, 4507 |
| BspHI | TCATGA | 2 cut(s) | 67, 2908 |
| BspLI | GGNNCC | 5 cut(s) | 94, 469, 1033, 2619, 4617 |
| BspMAI | CTGCAG | 2 cut(s) | 631, 3303 |
| BspMI | ACCTGC | 3 cut(s) | 3179, 3292, 4168 |
| BspOI | GCTAGC | 1 cut(s) | 831 |
| BspQI | GCTCTTC | 2 cut(s) | 1965, 2151 |
| BspT107I | GGYRCC | 1 cut(s) | 2617 |
| BspTNI | GGTCTC | 1 cut(s) | 3396 |
| BsrBI | CCGCTC | 1 cut(s) | 727 |
| BsrDI | GCAATG | 5 cut(s) | 3650, 3680, 3904, 3923, 4578 |
| BsrFI | RCCGGY | 1 cut(s) | 5 |
| BsrGI | TGTACA | 1 cut(s) | 3379 |
| BssAI | RCCGGY | 1 cut(s) | 5 |
| BssNI | GRCGYC | 1 cut(s) | 2685 |
| BssSI | CACGAG | 2 cut(s) | 77, 102 |
| BssT1I | CCWWGG | 3 cut(s) | 870, 2487, 3939 |
| Bst2BI | CACGAG | 2 cut(s) | 77, 102 |
| Bst2UI | CCWGG | 9 cut(s) | 210, 551, 1518, 1581, 2583, 2766, 3043, 3545, 4673 |
| Bst6I | CTCTTC | 4 cut(s) | 1965, 2151, 2466, 2766 |
| BstACI | GRCGYC | 1 cut(s) | 2685 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4309 |
| BstAUI | TGTACA | 1 cut(s) | 3379 |
| BstBAI | YACGTR | 1 cut(s) | 2258 |
| BstC8I | GCNNGC | 9 cut(s) | 7, 829, 1470, 1489, 2217, 2754, 3222, 3798, 4569 |
| BstDSI | CCRYGG | 5 cut(s) | 259, 304, 870, 2487, 3939 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 968, 3978 |
| BstMAI | GTCTC | 6 cut(s) | 258, 668, 935, 1679, 2246, 3396 |
| BstNI | CCWGG | 9 cut(s) | 210, 551, 1518, 1581, 2583, 2766, 3043, 3545, 4673 |
| BstNSI | RCATGY | 9 cut(s) | 363, 518, 1472, 1491, 2225, 2756, 3646, 3878, 4682 |
| BstSFI | CTRYAG | 4 cut(s) | 627, 786, 2163, 3299 |
| BstSLI | GKGCMC | 2 cut(s) | 2622, 2655 |
| BstV2I | GAAGAC | 5 cut(s) | 1506, 3153, 3362, 3645, 4196 |
| BstX2I | RGATCY | 7 cut(s) | 467, 623, 2477, 2554, 3406, 4154, 4583 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2366, 3675 |
| BstYI | RGATCY | 7 cut(s) | 467, 623, 2477, 2554, 3406, 4154, 4583 |
| Bsu36I | CCTNAGG | 3 cut(s) | 4206, 4494, 4506 |
| BsuI | GTATCC | 1 cut(s) | 1543 |
| BtgI | CCRYGG | 5 cut(s) | 259, 304, 870, 2487, 3939 |
| BtrI | CACGTC | 1 cut(s) | 3849 |
| BveI | ACCTGC | 3 cut(s) | 3179, 3292, 4168 |
| Cac8I | GCNNGC | 9 cut(s) | 7, 829, 1470, 1489, 2217, 2754, 3222, 3798, 4569 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1580, 1616, 2822, 3188, 3281 |
| CciI | TCATGA | 2 cut(s) | 67, 2908 |
| Cfr10I | RCCGGY | 1 cut(s) | 5 |
| Cfr13I | GGNCC | 6 cut(s) | 308, 1032, 1613, 2484, 4103, 4616 |
| Csp6I | GTAC | 7 cut(s) | 373, 587, 1749, 2117, 3380, 3964, 4211 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 402, 437, 711, 746, 1050, 1085, 1308, 1343 |
| CviQI | GTAC | 7 cut(s) | 373, 587, 1749, 2117, 3380, 3964, 4211 |
| DraI | TTTAAA | 1 cut(s) | 394 |
| EaeI | YGGCCR | 2 cut(s) | 3, 4453 |
| Eam1104I | CTCTTC | 4 cut(s) | 1965, 2151, 2466, 2766 |
| EarI | CTCTTC | 4 cut(s) | 1965, 2151, 2466, 2766 |
| Eco130I | CCWWGG | 3 cut(s) | 870, 2487, 3939 |
| Eco31I | GGTCTC | 1 cut(s) | 3396 |
| Eco32I | GATATC | 2 cut(s) | 2542, 3238 |
| Eco47I | GGWCC | 5 cut(s) | 308, 1032, 1613, 4103, 4616 |
| Eco57I | CTGAAG | 9 cut(s) | 1035, 1869, 1871, 1995, 2130, 3114, 3636, 3873, 4044 |
| Eco72I | CACGTG | 1 cut(s) | 2258 |
| Eco81I | CCTNAGG | 3 cut(s) | 4206, 4494, 4506 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 968, 3978 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1613 |
| EcoRI | GAATTC | 5 cut(s) | 1273, 1336, 1370, 1433, 3205 |
| EcoRII | CCWGG | 9 cut(s) | 208, 549, 1516, 1579, 2581, 2764, 3041, 3543, 4671 |
| EcoRV | GATATC | 2 cut(s) | 2542, 3238 |
| EcoT14I | CCWWGG | 3 cut(s) | 870, 2487, 3939 |
| EcoT22I | ATGCAT | 3 cut(s) | 1489, 1493, 2758 |
| ErhI | CCWWGG | 3 cut(s) | 870, 2487, 3939 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1962, 1994, 3493, 3525 |
| FaqI | GGGAC | 3 cut(s) | 793, 1700, 2981 |
| FauI | CCCGC | 2 cut(s) | 2304, 2428 |
| FbaI | TGATCA | 1 cut(s) | 252 |
| FseI | GGCCGGCC | 1 cut(s) | 9 |
| FspBI | CTAG | 9 cut(s) | 116, 828, 1448, 1667, 2481, 3597, 4247, 4386, 4419 |
| GsaI | CCCAGC | 3 cut(s) | 357, 3466, 4608 |
| HapII | CCGG | 5 cut(s) | 6, 576, 3476, 3764, 4619 |
| Hin1I | GRCGYC | 1 cut(s) | 2685 |
| HincII | GTYRAC | 3 cut(s) | 217, 634, 3946 |
| HindII | GTYRAC | 3 cut(s) | 217, 634, 3946 |
| HindIII | AAGCTT | 1 cut(s) | 3507 |
| HpaI | GTTAAC | 1 cut(s) | 3946 |
| HpaII | CCGG | 5 cut(s) | 6, 576, 3476, 3764, 4619 |
| Hpy166II | GTNNAC | 6 cut(s) | 217, 375, 634, 1035, 1072, 3946 |
| Hpy8I | GTNNAC | 6 cut(s) | 217, 375, 634, 1035, 1072, 3946 |
| Hpy99I | CGWCG | 1 cut(s) | 594 |
| HpyCH4IV | ACGT | 8 cut(s) | 589, 1326, 1830, 2257, 2406, 2685, 3292, 3848 |
| HpySE526I | ACGT | 8 cut(s) | 589, 1326, 1830, 2257, 2406, 2685, 3292, 3848 |
| Hsp92I | GRCGYC | 1 cut(s) | 2685 |
| KroI | GCCGGC | 1 cut(s) | 5 |
| KroNI | GCCGGC | 1 cut(s) | 7 |
| Ksp22I | TGATCA | 1 cut(s) | 252 |
| KspAI | GTTAAC | 1 cut(s) | 3946 |
| LguI | GCTCTTC | 2 cut(s) | 1965, 2151 |
| MaeI | CTAG | 9 cut(s) | 116, 828, 1448, 1667, 2481, 3597, 4247, 4386, 4419 |
| MaeII | ACGT | 8 cut(s) | 589, 1326, 1830, 2257, 2406, 2685, 3292, 3848 |
| MbiI | CCGCTC | 1 cut(s) | 727 |
| MfeI | CAATTG | 3 cut(s) | 156, 1239, 4659 |
| MflI | RGATCY | 7 cut(s) | 467, 623, 2477, 2554, 3406, 4154, 4583 |
| MhlI | GDGCHC | 4 cut(s) | 2382, 2622, 2655, 3444 |
| MlsI | TGGCCA | 1 cut(s) | 4455 |
| MluNI | TGGCCA | 1 cut(s) | 4455 |
| MlyI | GAGTC | 8 cut(s) | 629, 670, 802, 1175, 1223, 2152, 2825, 3122 |
| MmeI | TCCRAC | 9 cut(s) | 154, 228, 979, 984, 1443, 2597, 3706, 3895, 4694 |
| Mox20I | TGGCCA | 1 cut(s) | 4455 |
| Mph1103I | ATGCAT | 3 cut(s) | 1489, 1493, 2758 |
| MroNI | GCCGGC | 1 cut(s) | 5 |
| MroXI | GAANNNNTTC | 4 cut(s) | 63, 1884, 3495, 4485 |
| MscI | TGGCCA | 1 cut(s) | 4455 |
| MslI | CAYNNNNRTG | 3 cut(s) | 618, 788, 1348 |
| Msp20I | TGGCCA | 1 cut(s) | 4455 |
| MspA1I | CMGCKG | 1 cut(s) | 2311 |
| MspI | CCGG | 5 cut(s) | 6, 576, 3476, 3764, 4619 |
| MunI | CAATTG | 3 cut(s) | 156, 1239, 4659 |
| Mva1269I | GAATGC | 3 cut(s) | 305, 2099, 4608 |
| MvaI | CCWGG | 9 cut(s) | 210, 551, 1518, 1581, 2583, 2766, 3043, 3545, 4673 |
| NaeI | GCCGGC | 1 cut(s) | 7 |
| NciI | CCSGG | 1 cut(s) | 3476 |
| NcoI | CCATGG | 3 cut(s) | 870, 2487, 3939 |
| NgoMIV | GCCGGC | 1 cut(s) | 5 |
| NheI | GCTAGC | 1 cut(s) | 827 |
| NlaIV | GGNNCC | 5 cut(s) | 94, 469, 1033, 2619, 4617 |
| NmeAIII | GCCGAG | 3 cut(s) | 12, 70, 295 |
| NmuCI | GTSAC | 1 cut(s) | 4594 |
| NsiI | ATGCAT | 3 cut(s) | 1489, 1493, 2758 |
| NspI | RCATGY | 9 cut(s) | 363, 518, 1472, 1491, 2225, 2756, 3646, 3878, 4682 |
| OliI | CACNNNNGTG | 1 cut(s) | 788 |
| PaeI | GCATGC | 3 cut(s) | 1472, 1491, 2756 |
| PagI | TCATGA | 2 cut(s) | 67, 2908 |
| PasI | CCCWGGG | 1 cut(s) | 209 |
| PciI | ACATGT | 2 cut(s) | 2221, 3874 |
| PciSI | GCTCTTC | 2 cut(s) | 1965, 2151 |
| PctI | GAATGC | 3 cut(s) | 305, 2099, 4608 |
| PdiI | GCCGGC | 1 cut(s) | 7 |
| PdmI | GAANNNNTTC | 4 cut(s) | 63, 1884, 3495, 4485 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1162, 3257, 4100 |
| PfoI | TCCNGGA | 3 cut(s) | 549, 1516, 2764 |
| PleI | GAGTC | 8 cut(s) | 629, 670, 801, 1175, 1223, 2151, 2825, 3122 |
| PmaCI | CACGTG | 1 cut(s) | 2258 |
| PmlI | CACGTG | 1 cut(s) | 2258 |
| PpsI | GAGTC | 8 cut(s) | 629, 670, 801, 1175, 1223, 2151, 2825, 3122 |
| Ppu21I | YACGTR | 1 cut(s) | 2258 |
| PpuMI | RGGWCCY | 1 cut(s) | 1613 |
| PscI | ACATGT | 2 cut(s) | 2221, 3874 |
| PsiI | TTATAA | 3 cut(s) | 1659, 2451, 2744 |
| Psp1406I | AACGTT | 2 cut(s) | 1830, 3292 |
| Psp5II | RGGWCCY | 1 cut(s) | 1613 |
| Psp6I | CCWGG | 9 cut(s) | 208, 549, 1516, 1579, 2581, 2764, 3041, 3543, 4671 |
| PspCI | CACGTG | 1 cut(s) | 2258 |
| PspFI | CCCAGC | 3 cut(s) | 353, 3462, 4604 |
| PspGI | CCWGG | 9 cut(s) | 208, 549, 1516, 1579, 2581, 2764, 3041, 3543, 4671 |
| PspN4I | GGNNCC | 5 cut(s) | 94, 469, 1033, 2619, 4617 |
| PspPI | GGNCC | 6 cut(s) | 308, 1032, 1613, 2484, 4103, 4616 |
| PspPPI | RGGWCCY | 1 cut(s) | 1613 |
| PstI | CTGCAG | 2 cut(s) | 631, 3303 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1580, 1616, 2822, 3188, 3281 |
| PsuI | RGATCY | 7 cut(s) | 467, 623, 2477, 2554, 3406, 4154, 4583 |
| RigI | GGCCGGCC | 1 cut(s) | 9 |
| RsaI | GTAC | 7 cut(s) | 374, 588, 1750, 2118, 3381, 3965, 4212 |
| RsaNI | GTAC | 7 cut(s) | 373, 587, 1749, 2117, 3380, 3964, 4211 |
| RseI | CAYNNNNRTG | 3 cut(s) | 618, 788, 1348 |
| SapI | GCTCTTC | 2 cut(s) | 1965, 2151 |
| Sau96I | GGNCC | 6 cut(s) | 308, 1032, 1613, 2484, 4103, 4616 |
| ScaI | AGTACT | 2 cut(s) | 1750, 2118 |
| SchI | GAGTC | 8 cut(s) | 629, 670, 802, 1175, 1223, 2152, 2825, 3122 |
| SduI | GDGCHC | 4 cut(s) | 2382, 2622, 2655, 3444 |
| SfcI | CTRYAG | 4 cut(s) | 627, 786, 2163, 3299 |
| SinI | GGWCC | 5 cut(s) | 308, 1032, 1613, 4103, 4616 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 618, 788, 1348 |
| SmlI | CTYRAG | 3 cut(s) | 730, 2890, 4630 |
| SmoI | CTYRAG | 3 cut(s) | 730, 2890, 4630 |
| SphI | GCATGC | 3 cut(s) | 1472, 1491, 2756 |
| SsiI | CCGC | 7 cut(s) | 25, 96, 370, 725, 2311, 2435, 3002 |
| SspI | AATATT | 2 cut(s) | 63, 1867 |
| SspMI | CTAG | 9 cut(s) | 116, 828, 1448, 1667, 2481, 3597, 4247, 4386, 4419 |
| StyI | CCWWGG | 3 cut(s) | 870, 2487, 3939 |
| TaiI | ACGT | 8 cut(s) | 592, 1329, 1833, 2260, 2409, 2688, 3295, 3851 |
| TaqI | TCGA | 5 cut(s) | 1219, 3998, 4200, 4500, 4526 |
| TatI | WGTACW | 4 cut(s) | 1748, 2116, 3379, 3963 |
| TauI | GCSGC | 1 cut(s) | 28 |
| TseFI | GTSAC | 1 cut(s) | 4594 |
| Tsp45I | GTSAC | 1 cut(s) | 4594 |
| TspGWI | ACGGA | 4 cut(s) | 248, 372, 2155, 2843 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1162, 3257, 4100 |
| VpaK11BI | GGWCC | 5 cut(s) | 308, 1032, 1613, 4103, 4616 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 968, 3978 |
| XceI | RCATGY | 9 cut(s) | 363, 518, 1472, 1491, 2225, 2756, 3646, 3878, 4682 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 216, 479, 3672 |
| XmnI | GAANNNNTTC | 4 cut(s) | 63, 1884, 3495, 4485 |
| XspI | CTAG | 9 cut(s) | 116, 828, 1448, 1667, 2481, 3597, 4247, 4386, 4419 |
| ZraI | GACGTC | 1 cut(s) | 2686 |
| ZrmI | AGTACT | 2 cut(s) | 1750, 2118 |
| Zsp2I | ATGCAT | 3 cut(s) | 1489, 1493, 2758 |