AT2G39620

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0011932
Physical Location & Seq
Reverse (-)
16518890 .. 16521544
2655 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G39620.1

Sequence Viewer

Length: 2511 bp
ATGCCAATTAACTACACTAACCTCCTCCTTATGCTCCGGGAATGTAAGAACTTCCGGTGTCTTCTTCAAGTTCACGGCAGCTTGATAGTCTCAGGTCTTAAACCTCATAACCAGCTCATAAACGCTTATTCTCTCTTTCAAAGACAGGACCTTTCTCGCGTCATCTTTGATTCAGTTCGAGATCCAGGTGTTGTCTTGTGGAATTCAATGATCAGAGGATACACGAGAGCCGGTTTGCACAGAGAAGCTCTCGGATTCTTCGGGTATATGTCGGAGGAGAAAGGTATTGATCCAGACAAGTACAGTTTCACTTTTGCTTTGAAGGCTTGTGCCGGATCTATGGACTTTAAGAAGGGTTTACGGATACATGATTTGATTGCTGAGATGGGTCTTGAGTCTGATGTTTATATAGGAACTGCGTTAGTTGAAATGTATTGTAAAGCTCGTGACTTGGTTTCTGCAAGACAAGTGTTCGATAAAATGCATGTGAAGGATGTTGTTACTTGGAACACTATGGTTTCCGGGTTGGCTCAAAATGGATGTTCTAGTGCAGCTTTGCTGTTGTTTCATGATATGCGTTCGTGTTGTGTTGACATTGATCATGTTAGTTTATATAATCTGATCCCTGCGGTTTCGAAGCTAGAGAAGAGTGATGTCTGTAGATGTCTTCACGGACTTGTGATTAAGAAAGGTTTTATCTTTGCTTTCTCTAGTGGGCTGATTGACATGTATTGCAACTGCGCGGATTTATATGCTGCTGAATCTGTTTTTGAAGAAGTGTGGAGGAAGGATGAGTCTTCATGGGGTACAATGATGGCAGCTTATGCACATAATGGGTTCTTTGAGGAGGTATTGGAGTTGTTTGACCTTATGAGAAACTATGATGTTAGAATGAATAAGGTAGCTGCAGCAAGTGCTCTTCAAGCTGCTGCATATGTAGGGGATTTAGTGAAGGGGATTGCAATTCATGATTACGCAGTGCAACAAGGATTGATCGGTGATGTCTCAGTTGCTACTTCTCTTATGAGTATGTATTCCAAATGTGGTGAGTTGGAGATAGCCGAACAACTGTTCATTAATATTGAAGATAGAGATGTTGTTTCTTGGTCTGCCATGATTGCGTCGTATGAGCAAGCAGGGCAACACGATGAGGCTATCTCTTTGTTTAGAGATATGATGAGAATACATATCAAGCCTAATGCTGTAACTTTGACTAGTGTGCTACAAGGGTGTGCAGGAGTAGCCGCCTCTAGATTGGGTAAGAGCATACATTGTTATGCTATAAAGGCTGATATTGAGTCTGAGTTGGAAACTGCCACAGCTGTTATTTCAATGTACGCTAAATGTGGTCGATTTTCTCCCGCGCTCAAAGCCTTTGAAAGACTGCCAATTAAAGATGCTGTGGCATTCAACGCTCTAGCGCAAGGGTATACTCAGATTGGTGATGCCAATAAAGCATTTGATGTGTACAAGAACATGAAGTTACATGGTGTATGCCCAGACTCAAGAACTATGGTTGGTATGCTTCAAACTTGTGCCTTCTGTAGTGACTATGCTCGAGGTTCTTGTGTTTATGGACAAATTATAAAGCATGGGTTCGATTCAGAATGTCACGTGGCACATGCTCTTATCAATATGTTCACCAAATGTGATGCCCTCGCTGCAGCGATAGTTTTGTTTGACAAGTGTGGATTCGAGAAAAGTACTGTATCTTGGAATATAATGATGAACGGGTACTTACTCCATGGCCAGGCTGAAGAAGCTGTTGCCACTTTTCGTCAGATGAAGGTTGAGAAATTTCAGCCAAATGCAGTCACTTTTGTTAACATAGTACGCGCAGCAGCAGAATTATCAGCCTTGAGAGTAGGAATGTCGGTTCATTCCAGTCTCATTCAGTGTGGATTTTGTTCCCAAACACCAGTAGGAAACAGCCTTGTTGACATGTATGCGAAATGTGGAATGATAGAATCTTCCGAGAAATGCTTTATTGAGATAAGCAACAAATACATAGTTTCATGGAACACTATGCTATCCGCTTACGCAGCCCACGGTCTAGCAAGCTGTGCGGTCTCACTTTTCTTGTCCATGCAAGAAAACGAACTCAAACCAGACTCTGTTTCCTTTCTCAGTGTTCTTTCAGCTTGTAGACACGCAGGGTTAGTCGAAGAAGGAAAACGAATTTTCGAGGAAATGGGAGAGAGACACAAGATCGAAGCAGAAGTTGAACATTACGCGTGTATGGTAGATCTATTAGGGAAGGCTGGTTTGTTTGGTGAAGCTGTGGAAATGATGAGAAGAATGAGAGTGAAAACAAGTGTAGGAGTATGGGGAGCTTTATTAAATTCTTCAAGAATGCATTGTAATTTGTGGTTAAGCAATGCTGCATTGTGTCAGCTTGTTAAACTTGAGCCACTAAATCCTTCTCATTATAGTCAAGATCGGAGATTAGGAGAGGTCAATAATGTATCAAGAATTAAGAAAGTTCCTGCTTGTAGTTGGATAGAAGTCTGA

Protein Analysis

836

Amino Acids

92.67

Weight (kDa)

6.35

Isoelectric Point (pI)

42.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 62 - 111 2.9e-10 PPR repeat family
PPR PF01535 65 - 93 3.2e-06 PPR repeat
PPR_2 PF13041 164 - 203 5.8e-06 PPR repeat family
PPR PF01535 167 - 195 2.2e-06 PPR repeat
PPR PF01535 267 - 294 2.3e-06 PPR repeat
PPR_2 PF13041 364 - 412 8.9e-12 PPR repeat family
PPR PF01535 367 - 394 1.7e-06 PPR repeat
PPR_2 PF13041 466 - 513 1.2e-08 PPR repeat family
PPR_2 PF13041 568 - 613 1e-10 PPR repeat family
PPR PF01535 570 - 598 2.9e-06 PPR repeat
PPR_2 PF13041 670 - 715 5.9e-08 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011932)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39620 AT2G40720
fragaria_vesca FvH4_7g21891
malus_domestica MD07G1193300.v1.1
prunus_persica Prupe.2G231000_v2.0.a1
pyrus_communis pycom07g18250
rosa_chinensis RchiOBHm_Chr1g0366141
rosa_laevigata RLG00000027363
rosa_multiflora Rmu_co8484073.1_g000001 Rmu_sc0003987.1_g000001
rosa_roxburghii Rroxscaffold_4G00290450 Rroxscaffold_4G00290460
rosa_rugosa Rorug01G0327800 Rorug01G0327900
rosa_samantha Rh1AG335900 Rh1BG297300 Rh1CG313300 Rh1DG329100
rosa_wichuraiana Rw1G029800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1586
AccI GTMKAC 2 cut(s) 1430, 2146
AccII CGCG 5 cut(s) 159, 743, 1364, 1836, 2234
AciI CCGC 6 cut(s) 629, 743, 1245, 1362, 2034, 2066
AclWI GGATC 4 cut(s) 176, 284, 343, 616
AcoI YGGCCR 1 cut(s) 1747
AcsI RAATTY 4 cut(s) 202, 1796, 2178, 2341
AcuI CTGAAG 1 cut(s) 1776
AcvI CACGTG 1 cut(s) 1615
AfaI GTAC 7 cut(s) 302, 808, 1337, 1469, 1705, 1736, 1833
AfiI CCNNNNNNNGG 1 cut(s) 1750
AflIII ACRYGT 3 cut(s) 726, 1941, 2232
AhlI ACTAGT 1 cut(s) 1214
AjnI CCWGG 2 cut(s) 184, 1749
AloI GAACNNNNNNTCC 2 cut(s) 1860, 1892
Alw21I GWGCWC 1 cut(s) 919
Alw26I GTCTC 5 cut(s) 94, 1009, 1892, 2074, 2194
AlwI GGATC 4 cut(s) 176, 284, 343, 616
AlwNI CAGNNNCTG 1 cut(s) 2114
Ama87I CYCGRG 1 cut(s) 1557
AoxI GGCC 1 cut(s) 1747
ApoI RAATTY 4 cut(s) 202, 1796, 2178, 2341
AseI ATTAAT 1 cut(s) 1077
AspLEI GCGC 4 cut(s) 743, 1366, 1423, 1838
AspS9I GGNCC 1 cut(s) 148
AsuC2I CCSGG 2 cut(s) 38, 523
AsuHPI GGTGA 5 cut(s) 1010, 1058, 1454, 1633, 2285
AsuII TTCGAA 1 cut(s) 635
AvaI CYCGRG 1 cut(s) 1557
AvaII GGWCC 1 cut(s) 148
BalI TGGCCA 1 cut(s) 1749
BauI CACGAG 2 cut(s) 223, 444
BbrPI CACGTG 1 cut(s) 1615
BbsI GAAGAC 3 cut(s) 53, 659, 789
Bbv12I GWGCWC 1 cut(s) 919
BccI CCATC 2 cut(s) 379, 808
BceAI ACGGC 1 cut(s) 91
BciT130I CCWGG 2 cut(s) 186, 1751
BciVI GTATCC 2 cut(s) 212, 357
BclI TGATCA 2 cut(s) 210, 598
BcnI CCSGG 2 cut(s) 38, 523
BcoDI GTCTC 5 cut(s) 94, 1009, 1892, 2074, 2194
BcuI ACTAGT 1 cut(s) 1214
BfaI CTAG 7 cut(s) 546, 641, 711, 1215, 1251, 1418, 2054
BfmI CTRYAG 4 cut(s) 658, 906, 1543, 1662
BfuI GTATCC 2 cut(s) 212, 357
BglII AGATCT 1 cut(s) 2245
BmcAI AGTACT 1 cut(s) 1705
Bme1390I CCNGG 4 cut(s) 38, 186, 523, 1751
Bme18I GGWCC 1 cut(s) 148
BmeT110I CYCGRG 1 cut(s) 1557
BmgT120I GGNCC 1 cut(s) 148
BmrFI CCNGG 4 cut(s) 38, 186, 523, 1751
BmsI GCATC 3 cut(s) 1387, 1435, 1642
BpiI GAAGAC 3 cut(s) 53, 659, 789
BplI GAGNNNNNCTC 4 cut(s) 234, 266, 1142, 1174
Bpu14I TTCGAA 1 cut(s) 635
BpuEI CTTGAG 4 cut(s) 413, 1489, 1879, 2426
BpuMI CCSGG 2 cut(s) 38, 523
BsaAI YACGTR 1 cut(s) 1615
BsaI GGTCTC 1 cut(s) 2074
BsaJI CCNNGG 2 cut(s) 1744, 2047
BsaWI WCCGGW 1 cut(s) 54
Bsc4I CCNNNNNNNGG 1 cut(s) 1750
Bse118I RCCGGY 1 cut(s) 230
Bse1I ACTGG 2 cut(s) 1884, 1919
Bse3DI GCAATG 1 cut(s) 2383
BseBI CCWGG 2 cut(s) 186, 1751
BseDI CCNNGG 2 cut(s) 1744, 2047
BseGI GGATG 3 cut(s) 499, 545, 796
BseLI CCNNNNNNNGG 1 cut(s) 1750
BseMI GCAATG 1 cut(s) 2383
BseMII CTCAG 6 cut(s) 105, 372, 1020, 1293, 1448, 2140
BseNI ACTGG 2 cut(s) 1884, 1919
BseRI GAGGAG 3 cut(s) 14, 290, 860
BsgI GTGCAG 2 cut(s) 570, 1254
Bsh1236I CGCG 5 cut(s) 159, 743, 1364, 1836, 2234
BshFI GGCC 1 cut(s) 1749
BsiHKAI GWGCWC 1 cut(s) 919
BsiHKCI CYCGRG 1 cut(s) 1557
BsiSI CCGG 5 cut(s) 37, 55, 231, 333, 522
BslI CCNNNNNNNGG 1 cut(s) 1750
BsmAI GTCTC 5 cut(s) 94, 1009, 1892, 2074, 2194
BsmI GAATGC 2 cut(s) 1406, 2358
BsnI GGCC 1 cut(s) 1749
Bso31I GGTCTC 1 cut(s) 2074
BsoBI CYCGRG 1 cut(s) 1557
Bsp119I TTCGAA 1 cut(s) 635
Bsp1286I GDGCHC 1 cut(s) 919
Bsp1407I TGTACA 1 cut(s) 1467
Bsp19I CCATGG 1 cut(s) 1744
BspACI CCGC 6 cut(s) 629, 743, 1245, 1362, 2034, 2066
BspANI GGCC 1 cut(s) 1749
BspCNI CTCAG 6 cut(s) 104, 373, 1019, 1294, 1447, 2139
BspFNI CGCG 5 cut(s) 159, 743, 1364, 1836, 2234
BspHI TCATGA 2 cut(s) 568, 967
BspMAI CTGCAG 2 cut(s) 910, 1666
BspPI GGATC 4 cut(s) 176, 284, 343, 616
BspQI GCTCTTC 1 cut(s) 924
BspT104I TTCGAA 1 cut(s) 635
BspTNI GGTCTC 1 cut(s) 2074
BsrDI GCAATG 1 cut(s) 2383
BsrFI RCCGGY 1 cut(s) 230
BsrGI TGTACA 1 cut(s) 1467
BsrI ACTGG 2 cut(s) 1884, 1919
BssAI RCCGGY 1 cut(s) 230
BssECI CCNNGG 2 cut(s) 1744, 2047
BssNAI GTATAC 1 cut(s) 1431
BssSI CACGAG 2 cut(s) 223, 444
BssT1I CCWWGG 1 cut(s) 1744
Bst1107I GTATAC 1 cut(s) 1431
Bst2BI CACGAG 2 cut(s) 223, 444
Bst2UI CCWGG 2 cut(s) 186, 1751
Bst4CI ACNGT 4 cut(s) 305, 1071, 1708, 2051
Bst6I CTCTTC 2 cut(s) 641, 924
BstAPI GCANNNNNTGC 3 cut(s) 824, 914, 2063
BstAUI TGTACA 1 cut(s) 1467
BstBAI YACGTR 1 cut(s) 1615
BstBI TTCGAA 1 cut(s) 635
BstC8I GCNNGC 2 cut(s) 1134, 2059
BstDEI CTNAG 6 cut(s) 91, 381, 1006, 1302, 1434, 2126
BstDSI CCRYGG 2 cut(s) 1744, 2047
BstF5I GGATG 3 cut(s) 499, 545, 796
BstFNI CGCG 5 cut(s) 159, 743, 1364, 1836, 2234
BstHHI GCGC 4 cut(s) 743, 1366, 1423, 1838
BstMAI GTCTC 5 cut(s) 94, 1009, 1892, 2074, 2194
BstNI CCWGG 2 cut(s) 186, 1751
BstNSI RCATGY 4 cut(s) 488, 730, 1625, 1945
BstSCI CCNGG 4 cut(s) 36, 184, 521, 1749
BstSFI CTRYAG 4 cut(s) 658, 906, 1543, 1662
BstUI CGCG 5 cut(s) 159, 743, 1364, 1836, 2234
BstV2I GAAGAC 3 cut(s) 53, 659, 789
BstX2I RGATCY 3 cut(s) 181, 335, 2245
BstYI RGATCY 3 cut(s) 181, 335, 2245
BstZ17I GTATAC 1 cut(s) 1431
BsuI GTATCC 2 cut(s) 212, 357
BsuRI GGCC 1 cut(s) 1749
BtgI CCRYGG 2 cut(s) 1744, 2047
BtsCI GGATG 3 cut(s) 499, 545, 796
BtsI GCAGTG 1 cut(s) 984
BtsIMutI CAGTG 3 cut(s) 984, 1901, 2134
Cac8I GCNNGC 2 cut(s) 1134, 2059
CaiI CAGNNNCTG 1 cut(s) 2114
CciI TCATGA 2 cut(s) 568, 967
CfoI GCGC 4 cut(s) 743, 1366, 1423, 1838
Cfr10I RCCGGY 1 cut(s) 230
Cfr13I GGNCC 1 cut(s) 148
CseI GACGC 2 cut(s) 148, 1110
Csp6I GTAC 7 cut(s) 301, 807, 1336, 1468, 1704, 1735, 1832
CviQI GTAC 7 cut(s) 301, 807, 1336, 1468, 1704, 1735, 1832
DdeI CTNAG 6 cut(s) 91, 381, 1006, 1302, 1434, 2126
EaeI YGGCCR 1 cut(s) 1747
Eam1104I CTCTTC 2 cut(s) 641, 924
EarI CTCTTC 2 cut(s) 641, 924
Eco130I CCWWGG 1 cut(s) 1744
Eco31I GGTCTC 1 cut(s) 2074
Eco47I GGWCC 1 cut(s) 148
Eco57I CTGAAG 1 cut(s) 1776
Eco72I CACGTG 1 cut(s) 1615
Eco88I CYCGRG 1 cut(s) 1557
EcoO109I RGGNCCY 1 cut(s) 148
EcoRI GAATTC 1 cut(s) 202
EcoRII CCWGG 2 cut(s) 184, 1749
EcoT14I CCWWGG 1 cut(s) 1744
EcoT22I ATGCAT 2 cut(s) 486, 2358
ErhI CCWWGG 1 cut(s) 1744
FauI CCCGC 1 cut(s) 1369
FauNDI CATATG 1 cut(s) 934
FbaI TGATCA 2 cut(s) 210, 598
FblI GTMKAC 2 cut(s) 1430, 2146
FokI GGATG 3 cut(s) 506, 552, 803
FspBI CTAG 7 cut(s) 546, 641, 711, 1215, 1251, 1418, 2054
GlaI GCGC 4 cut(s) 742, 1365, 1422, 1837
HaeIII GGCC 1 cut(s) 1749
HapII CCGG 5 cut(s) 37, 55, 231, 333, 522
HgaI GACGC 2 cut(s) 148, 1110
HhaI GCGC 4 cut(s) 743, 1366, 1423, 1838
Hin6I GCGC 4 cut(s) 741, 1364, 1421, 1836
HinP1I GCGC 4 cut(s) 741, 1364, 1421, 1836
HincII GTYRAC 3 cut(s) 592, 1825, 1939
HindII GTYRAC 3 cut(s) 592, 1825, 1939
HpaI GTTAAC 1 cut(s) 1825
HpaII CCGG 5 cut(s) 37, 55, 231, 333, 522
HphI GGTGA 5 cut(s) 1010, 1058, 1454, 1633, 2285
Hpy166II GTNNAC 9 cut(s) 73, 359, 592, 1431, 1468, 1641, 1825, 1939, 2147
Hpy8I GTNNAC 9 cut(s) 73, 359, 592, 1431, 1468, 1641, 1825, 1939, 2147
Hpy99I CGWCG 1 cut(s) 1126
HpyCH4III ACNGT 4 cut(s) 305, 1071, 1708, 2051
HpyCH4IV ACGT 1 cut(s) 1614
HpyF3I CTNAG 6 cut(s) 91, 381, 1006, 1302, 1434, 2126
HpySE526I ACGT 1 cut(s) 1614
HspAI GCGC 4 cut(s) 741, 1364, 1421, 1836
Ksp22I TGATCA 2 cut(s) 210, 598
KspAI GTTAAC 1 cut(s) 1825
LguI GCTCTTC 1 cut(s) 924
LmnI GCTCC 2 cut(s) 39, 2330
LweI GCATC 3 cut(s) 1387, 1435, 1642
MaeI CTAG 7 cut(s) 546, 641, 711, 1215, 1251, 1418, 2054
MaeII ACGT 1 cut(s) 1614
MaeIII GTNAC 7 cut(s) 446, 499, 1204, 1482, 1547, 1610, 1813
MflI RGATCY 3 cut(s) 181, 335, 2245
MhlI GDGCHC 1 cut(s) 919
MlsI TGGCCA 1 cut(s) 1749
MluI ACGCGT 1 cut(s) 2232
MluNI TGGCCA 1 cut(s) 1749
MlyI GAGTC 5 cut(s) 404, 803, 1307, 1496, 2105
MmeI TCCRAC 4 cut(s) 252, 1032, 1287, 2477
Mox20I TGGCCA 1 cut(s) 1749
Mph1103I ATGCAT 2 cut(s) 486, 2358
MscI TGGCCA 1 cut(s) 1749
MslI CAYNNNNRTG 1 cut(s) 1275
Msp20I TGGCCA 1 cut(s) 1749
MspA1I CMGCKG 1 cut(s) 1322
MspI CCGG 5 cut(s) 37, 55, 231, 333, 522
MspR9I CCNGG 4 cut(s) 38, 186, 523, 1751
Mva1269I GAATGC 2 cut(s) 1406, 2358
MvaI CCWGG 2 cut(s) 186, 1751
MvnI CGCG 5 cut(s) 159, 743, 1364, 1836, 2234
NciI CCSGG 2 cut(s) 38, 523
NcoI CCATGG 1 cut(s) 1744
NdeI CATATG 1 cut(s) 934
NmuCI GTSAC 4 cut(s) 446, 1547, 1610, 1813
NsiI ATGCAT 2 cut(s) 486, 2358
NspI RCATGY 4 cut(s) 488, 730, 1625, 1945
NspV TTCGAA 1 cut(s) 635
PaeR7I CTCGAG 1 cut(s) 1557
PagI TCATGA 2 cut(s) 568, 967
PciI ACATGT 2 cut(s) 726, 1941
PciSI GCTCTTC 1 cut(s) 924
PctI GAATGC 2 cut(s) 1406, 2358
PfeI GAWTC 6 cut(s) 170, 255, 761, 1601, 1692, 1967
PfoI TCCNGGA 1 cut(s) 36
PleI GAGTC 5 cut(s) 403, 802, 1306, 1496, 2105
PmaCI CACGTG 1 cut(s) 1615
PmlI CACGTG 1 cut(s) 1615
PpsI GAGTC 5 cut(s) 403, 802, 1306, 1496, 2105
Ppu21I YACGTR 1 cut(s) 1615
PpuMI RGGWCCY 1 cut(s) 148
PscI ACATGT 2 cut(s) 726, 1941
PshBI ATTAAT 1 cut(s) 1077
PsiI TTATAA 1 cut(s) 1586
Psp5II RGGWCCY 1 cut(s) 148
Psp6I CCWGG 2 cut(s) 184, 1749
PspCI CACGTG 1 cut(s) 1615
PspGI CCWGG 2 cut(s) 184, 1749
PspPI GGNCC 1 cut(s) 148
PspPPI RGGWCCY 1 cut(s) 148
PspXI VCTCGAGB 1 cut(s) 1557
PstI CTGCAG 2 cut(s) 910, 1666
PstNI CAGNNNCTG 1 cut(s) 2114
PsuI RGATCY 3 cut(s) 181, 335, 2245
PvuII CAGCTG 1 cut(s) 1322
RsaI GTAC 7 cut(s) 302, 808, 1337, 1469, 1705, 1736, 1833
RsaNI GTAC 7 cut(s) 301, 807, 1336, 1468, 1704, 1735, 1832
RseI CAYNNNNRTG 1 cut(s) 1275
SapI GCTCTTC 1 cut(s) 924
Sau96I GGNCC 1 cut(s) 148
ScaI AGTACT 1 cut(s) 1705
SchI GAGTC 5 cut(s) 404, 803, 1307, 1496, 2105
ScrFI CCNGG 4 cut(s) 38, 186, 523, 1751
SduI GDGCHC 1 cut(s) 919
SfaNI GCATC 3 cut(s) 1387, 1435, 1642
SfcI CTRYAG 4 cut(s) 658, 906, 1543, 1662
Sfr274I CTCGAG 1 cut(s) 1557
SfuI TTCGAA 1 cut(s) 635
SinI GGWCC 1 cut(s) 148
SlaI CTCGAG 1 cut(s) 1557
SmiMI CAYNNNNRTG 1 cut(s) 1275
SmlI CTYRAG 5 cut(s) 392, 1504, 1557, 1858, 2405
SmoI CTYRAG 5 cut(s) 392, 1504, 1557, 1858, 2405
SpeI ACTAGT 1 cut(s) 1214
SsiI CCGC 6 cut(s) 629, 743, 1245, 1362, 2034, 2066
SspI AATATT 1 cut(s) 1081
SspMI CTAG 7 cut(s) 546, 641, 711, 1215, 1251, 1418, 2054
StyD4I CCNGG 4 cut(s) 36, 184, 521, 1749
StyI CCWWGG 1 cut(s) 1744
TaaI ACNGT 4 cut(s) 305, 1071, 1708, 2051
TaiI ACGT 1 cut(s) 1617
TatI WGTACW 3 cut(s) 300, 1467, 1703
TauI GCSGC 1 cut(s) 1247
TfiI GAWTC 6 cut(s) 170, 255, 761, 1601, 1692, 1967
TscAI CASTG 3 cut(s) 984, 1901, 2134
TseFI GTSAC 4 cut(s) 446, 1547, 1610, 1813
Tsp45I GTSAC 4 cut(s) 446, 1547, 1610, 1813
TspGWI ACGGA 2 cut(s) 376, 687
TspRI CASTG 3 cut(s) 984, 1901, 2134
VpaK11BI GGWCC 1 cut(s) 148
VspI ATTAAT 1 cut(s) 1077
XapI RAATTY 4 cut(s) 202, 1796, 2178, 2341
XbaI TCTAGA 1 cut(s) 1250
XceI RCATGY 4 cut(s) 488, 730, 1625, 1945
XhoI CTCGAG 1 cut(s) 1557
XmiI GTMKAC 2 cut(s) 1430, 2146
XspI CTAG 7 cut(s) 546, 641, 711, 1215, 1251, 1418, 2054
ZrmI AGTACT 1 cut(s) 1705
Zsp2I ATGCAT 2 cut(s) 486, 2358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.