Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0011932

Physical Location & Seq

Genomic Coordinates Forward (+)

44704265 .. 44710755

Gene Structure 6491 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0327900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

ATGTTGGCAATGGAGAAAGATTTTGATGCCAAGTTGAAGATTCAGGGGAATTCTTCTTCTAATGGTGGTGGTGGTGGTGGTGCTAATAGTAATGTTCAGAGAGCCAAGAACTTTGCTTTCAGGGCTCCCCAAGAGAATTTCACCATCCAAGACTTTGAATTGGGCAAGATCTATGGCGTTGGTTCCTATTCAAAGGTTGTGAGAGCAAGGAAGAAGGATTCAGGAATTGTCTACGCATTAAAGATCATGGACAAAAAGTTCATCACCAAAGAAAATAAAACAGCTTATGTGAAGCTGGAACGTATTGTTCTTGATCAGCTGGATCATCCAGGTGTTGTGCGGCTATTTTTCACTTTTCAGGATTCCTTTTCACTGTATATGGCACTGGAATCCTGTGAAGGTGGAGAACTCTTTGATCAAATAACAAGGAAAGGTCGTCTGTCTGAGGACGAAGCTCGCTTTTATGCAGCAGAAGTTGTAGACGCACTTGAATATATACACAGTATGGGATTGATACATAGAGATATAAAGCCAGAGAATTTGTTACTTACAGCAGAGGGTAATATCAAGGTTGCTGATTTTGGGAGTGTAAAGCCTATGCAGGATAGCCAAATTACAGTCCTTCCAAATGCAGCATCAGATGATAAGGCTTGTACATTTGTTGGGACAGCTGCATATGTTCCTCCAGAAGTCCTGAATTCTTCCCCTGCAACTTTTGGAAATGACCTCTGGGCACTTGGCTGCACCTTGTACCAAATGCTTTCAGGAACTTCTCCTTTCAAAGATGCAAGCGAGTGGCTTATTTTTCAAAGAATTATAGCAAGAGATATTAGGTTTCCGAATTATTTCTCAGACGAAGCTAAAGACCTTATTGATCGGTTATTGGATTTAGATCCCAGTAGGAGGCCTGGTGCTGGACGCGATGGTTATGCTGCACTGAAGATGCATCCATTCTTTAAGGGGGTCGACTGGAAAAATTTAAGAGCGCAAACCCCTCCGAAACTTGCCTTGGAGCCGGGGTCAGGTGAGGCTGATGATGTCCGTGATAACTCATGGAACCCTTCACATATTGGAGATGGCGCAGCAAGACAAAATGAGGGTAACACTGGTTCAGCATCCTCTTCTGAAGCATCTGGTCATGTAACTAGGCTAGCTTCAATTGACTCCTTTGATTCAAAATGGCAACAATTTCTTGACCCTGGTGAATCTGTTCTCATGATCTCAATGGTGAAGAAACTTCAAAAACTGACAAGCAAGAAGGTGCAGCTTATTCTCACCAACAAGCCAAAGTTGATATATGTGGATCCTGCAAAGCTGCTGATGAAGGGAAATATAATTTGGTCTGACAACTCTAATGATCTCAATGTCCAAGTTGCTAGTCCTTCACAGTTCAAAATTGTTACGCCCAAAAAGGTACTGTCATTTGAGGATGCAAAACAAAGAGCATGGCAATGGAAGAAGGCAATTGAGGGGCTTCAAAATAGGAGATCTTTGAAGCTCATCCAAGAAATAAACCGGAAGGGGCCTTACATTGGCCTCATCACAGTTTATCCACCAGAAGAGGCTGCTTTTTTCCTCACCGGGGCTTTTAAGCCTAATCCAAAGCATCCTTCTCTGGATTTCTCAGGTAGGCGATTCCGGGTGGGAAAGATCCATGATAAGAAAGTCGTCTATGTGAGATGTGGAGTTGGAATGGTGAATGCTGCTGCAGCAACACAGCAAATGCTGGATCTATTTGACGTTGTCGGAATTGTTCACTTTGGCATATCTGGCAATGCCAATAACTCTATGTCTATTGGTGATGTTACCATTCCTCAACAGTTAGCTCACACTGGCATATGGGATTGGGTGAACCCAAATAGAACTTTGGATCTGGATGATGTTGCACAATTAGACTTTGAAGTATACAATGAACCAAAAGGAGGAGAGAACCTGTTGGGACACATTGGATTTAGAAATGAACAGTTCTATTCTGAGTCCGGTAATCCAAATATCGCTCGGCCATTGTTTTGGGCAAAGACTACTCGAAAGTGGCTTCAGGTTGCTGCCCATTTGGAGGGAGTCGAACTGGTGCAATGTGTGAATTCGAGTTTGTGTCTGCCACAGAAGCCCAAGCTAGTTGTTGGTCTTAGGGGATCAACAGGCAATACTTTTGTGGATAATGCAGCTTACAGGAACTTCCTTTTTCAAACTTTTCGTGTTTCCTCAGTGGACATGGAAAGCTCGGCTGTAGTAATGACAAGCTTGTCAAATGGCTTCCCGGTGATTGTGATCAGAGGGTTATCAGATTTAGCAGGAAGGCAAGCAGGAGAGAACCAGATTCAGACCTTTGGGCCTCTGGCAGCAATAAATGCTTGCAAAGTAGTTGTACAGTTCATCAAGGACCTGCCAGAGGCAGGGTATGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

802

Amino Acids

88.69

Weight (kDa)

8.51

Isoelectric Point (pI)

31.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	53 - 318	2e-65	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	54 - 303	8.4e-29	Protein tyrosine and serine/threonine kinase
Kinase-like	PF14531	150 - 268	1.1e-08	Kinase-like
PH_3	PF14593	392 - 495	3.8e-30	PH domain
PNP_UDP_1	PF01048	511 - 794	2.3e-31	Phosphorylase superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39620 AT2G40720
fragaria_vesca	FvH4_7g21891
malus_domestica	MD07G1193300.v1.1
prunus_persica	Prupe.2G231000_v2.0.a1
pyrus_communis	pycom07g18250
rosa_chinensis	RchiOBHm_Chr1g0366141
rosa_laevigata	RLG00000027363
rosa_multiflora	Rmu_co8484073.1_g000001 Rmu_sc0003987.1_g000001
rosa_roxburghii	Rroxscaffold_4G00290450 Rroxscaffold_4G00290460
rosa_rugosa	Rorug01G0327800 Rorug01G0327900
rosa_samantha	Rh1AG335900 Rh1BG297300 Rh1CG313300 Rh1DG329100
rosa_wichuraiana	Rw1G029800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2245
Acc36I	ACCTGC	1 cut(s)	2394
AccI	GTMKAC	4 cut(s)	231, 480, 966, 1905
AccII	CGCG	1 cut(s)	921
AciI	CCGC	1 cut(s)	340
AclWI	GGATC	8 cut(s)	330, 887, 1298, 1311, 1645, 1737, 1878, 2143
AcoI	YGGCCR	1 cut(s)	2000
AcsI	RAATTY	6 cut(s)	49, 136, 538, 697, 976, 2083
AcuI	CTGAAG	3 cut(s)	959, 1146, 2021
AfaI	GTAC	4 cut(s)	655, 752, 1416, 2370
AfiI	CCNNNNNNNGG	9 cut(s)	903, 914, 1022, 1532, 1582, 1922, 2056, 2392, 2396
AjnI	CCWGG	3 cut(s)	328, 907, 1198
AjuI	GAANNNNNNNTTGG	6 cut(s)	992, 1024, 1321, 1353, 1594, 1626
AloI	GAACNNNNNNTCC	2 cut(s)	242, 274
AlwI	GGATC	8 cut(s)	330, 887, 1298, 1311, 1645, 1737, 1878, 2143
AoxI	GGCC	5 cut(s)	905, 1523, 1534, 2000, 2333
ApoI	RAATTY	6 cut(s)	49, 136, 538, 697, 976, 2083
Asp700I	GAANNNNTTC	2 cut(s)	845, 1209
AspLEI	GCGC	2 cut(s)	988, 1082
AspS9I	GGNCC	3 cut(s)	1523, 2333, 2383
AsuC2I	CCSGG	4 cut(s)	1017, 1582, 1640, 2261
AsuNHI	GCTAGC	1 cut(s)	1150
AvaII	GGWCC	1 cut(s)	2383
BaeGI	GKGCMC	1 cut(s)	736
BamHI	GGATCC	1 cut(s)	1303
BanII	GRGCYC	1 cut(s)	127
BarI	GAAGNNNNNNTAC	2 cut(s)	1511, 1543
BccI	CCATC	3 cut(s)	152, 917, 1070
BcgI	CGANNNNNNTGC	2 cut(s)	911, 945
BciT130I	CCWGG	3 cut(s)	330, 909, 1200
BclI	TGATCA	3 cut(s)	313, 415, 2271
BcnI	CCSGG	4 cut(s)	1017, 1582, 1640, 2261
BfaI	CTAG	4 cut(s)	1146, 1151, 1377, 2117
BfmI	CTRYAG	2 cut(s)	1707, 2229
BfuAI	ACCTGC	1 cut(s)	2394
BglII	AGATCT	2 cut(s)	168, 1487
Bme1390I	CCNGG	7 cut(s)	330, 909, 1017, 1200, 1582, 1640, 2261
Bme18I	GGWCC	1 cut(s)	2383
BmgT120I	GGNCC	3 cut(s)	1523, 2333, 2383
BmiI	GGNNCC	6 cut(s)	126, 184, 1014, 1058, 1305, 1524
BmrFI	CCNGG	7 cut(s)	330, 909, 1017, 1200, 1582, 1640, 2261
BmrI	ACTGGG	1 cut(s)	891
BmsI	GCATC	9 cut(s)	16, 644, 775, 933, 955, 1124, 1139, 1420, 1615
BmtI	GCTAGC	1 cut(s)	1154
BmuI	ACTGGG	1 cut(s)	891
BpmI	CTGGAG	1 cut(s)	669
BpuMI	CCSGG	4 cut(s)	1017, 1582, 1640, 2261
BsaBI	GATNNNNATC	2 cut(s)	891, 2270
BsaJI	CCNNGG	4 cut(s)	1008, 1016, 1198, 1581
BsaWI	WCCGGW	2 cut(s)	1515, 1979
BsaXI	ACNNNNNCTCC	4 cut(s)	895, 925, 1004, 1034
Bsc4I	CCNNNNNNNGG	9 cut(s)	903, 914, 1022, 1532, 1582, 1922, 2056, 2392, 2396
Bse1I	ACTGG	6 cut(s)	390, 897, 974, 1111, 1837, 2073
Bse3DI	GCAATG	4 cut(s)	15, 1457, 1780, 2081
Bse8I	GATNNNNATC	2 cut(s)	891, 2270
BseBI	CCWGG	3 cut(s)	330, 909, 1200
BseDI	CCNNGG	4 cut(s)	1008, 1016, 1198, 1581
BseGI	GGATG	8 cut(s)	144, 325, 946, 1115, 1435, 1500, 1606, 1882
BseJI	GATNNNNATC	2 cut(s)	891, 2270
BseLI	CCNNNNNNNGG	9 cut(s)	903, 914, 1022, 1532, 1582, 1922, 2056, 2392, 2396
BseMI	GCAATG	4 cut(s)	15, 1457, 1780, 2081
BseMII	CTCAG	5 cut(s)	435, 864, 1638, 1965, 2220
BseNI	ACTGG	6 cut(s)	390, 897, 974, 1111, 1837, 2073
BseRI	GAGGAG	1 cut(s)	1938
BseSI	GKGCMC	1 cut(s)	736
BsgI	GTGCAG	3 cut(s)	727, 918, 1283
Bsh1236I	CGCG	1 cut(s)	921
BshFI	GGCC	5 cut(s)	907, 1525, 1536, 2002, 2335
BsiSI	CCGG	6 cut(s)	1016, 1516, 1581, 1639, 1980, 2261
BslFI	GGGAC	2 cut(s)	679, 1953
BslI	CCNNNNNNNGG	9 cut(s)	903, 914, 1022, 1532, 1582, 1922, 2056, 2392, 2396
BsmFI	GGGAC	2 cut(s)	679, 1953
BsmI	GAATGC	1 cut(s)	1705
BsnI	GGCC	5 cut(s)	907, 1525, 1536, 2002, 2335
Bsp1286I	GDGCHC	2 cut(s)	127, 736
Bsp1407I	TGTACA	2 cut(s)	653, 2368
BspACI	CCGC	1 cut(s)	340
BspANI	GGCC	5 cut(s)	907, 1525, 1536, 2002, 2335
BspCNI	CTCAG	5 cut(s)	436, 863, 1637, 1966, 2219
BspFNI	CGCG	1 cut(s)	921
BspHI	TCATGA	1 cut(s)	1215
BspLI	GGNNCC	6 cut(s)	126, 184, 1014, 1058, 1305, 1524
BspMAI	CTGCAG	1 cut(s)	1711
BspMI	ACCTGC	1 cut(s)	2394
BspOI	GCTAGC	1 cut(s)	1154
BspPI	GGATC	8 cut(s)	330, 887, 1298, 1311, 1645, 1737, 1878, 2143
BsrDI	GCAATG	4 cut(s)	15, 1457, 1780, 2081
BsrGI	TGTACA	2 cut(s)	653, 2368
BsrI	ACTGG	6 cut(s)	390, 897, 974, 1111, 1837, 2073
BssECI	CCNNGG	4 cut(s)	1008, 1016, 1198, 1581
BssNAI	GTATAC	1 cut(s)	1906
BssT1I	CCWWGG	1 cut(s)	1008
Bst1107I	GTATAC	1 cut(s)	1906
Bst2UI	CCWGG	3 cut(s)	330, 909, 1200
Bst4CI	ACNGT	9 cut(s)	375, 503, 619, 1389, 1419, 1546, 1821, 1965, 2373
Bst6I	CTCTTC	2 cut(s)	1126, 1554
BstAPI	GCANNNNNTGC	1 cut(s)	2351
BstAUI	TGTACA	2 cut(s)	653, 2368
BstC8I	GCNNGC	5 cut(s)	457, 790, 1152, 2304, 2356
BstDEI	CTNAG	6 cut(s)	444, 850, 1624, 1974, 2129, 2206
BstENI	CCTNNNNNAGG	1 cut(s)	2390
BstF5I	GGATG	8 cut(s)	144, 325, 946, 1115, 1435, 1500, 1606, 1882
BstFNI	CGCG	1 cut(s)	921
BstHHI	GCGC	2 cut(s)	988, 1082
BstMWI	GCNNNNNNNGC	5 cut(s)	122, 1709, 1770, 2107, 2351
BstNI	CCWGG	3 cut(s)	330, 909, 1200
BstSCI	CCNGG	7 cut(s)	328, 907, 1015, 1198, 1580, 1638, 2259
BstSFI	CTRYAG	2 cut(s)	1707, 2229
BstSLI	GKGCMC	1 cut(s)	736
BstUI	CGCG	1 cut(s)	921
BstX2I	RGATCY	7 cut(s)	168, 892, 1303, 1487, 1650, 1729, 1870
BstXI	CCANNNNNNTGG	1 cut(s)	2010
BstYI	RGATCY	7 cut(s)	168, 892, 1303, 1487, 1650, 1729, 1870
BstZ17I	GTATAC	1 cut(s)	1906
BsuRI	GGCC	5 cut(s)	907, 1525, 1536, 2002, 2335
BtgZI	GCGATG	1 cut(s)	936
BtsCI	GGATG	8 cut(s)	144, 325, 946, 1115, 1435, 1500, 1606, 1882
BtsIMutI	CAGTG	6 cut(s)	371, 383, 935, 1104, 1830, 2214
BveI	ACCTGC	1 cut(s)	2394
Cac8I	GCNNGC	5 cut(s)	457, 790, 1152, 2304, 2356
CciI	TCATGA	1 cut(s)	1215
CfoI	GCGC	2 cut(s)	988, 1082
Cfr13I	GGNCC	3 cut(s)	1523, 2333, 2383
CseI	GACGC	2 cut(s)	491, 927
Csp6I	GTAC	4 cut(s)	654, 751, 1415, 2369
CviAII	CATG	7 cut(s)	247, 1053, 1139, 1216, 1446, 1655, 2215
CviQI	GTAC	4 cut(s)	654, 751, 1415, 2369
DdeI	CTNAG	6 cut(s)	444, 850, 1624, 1974, 2129, 2206
DrdI	GACNNNNNNGTC	1 cut(s)	2245
DseDI	GACNNNNNNGTC	1 cut(s)	2245
EaeI	YGGCCR	1 cut(s)	2000
Eam1104I	CTCTTC	2 cut(s)	1126, 1554
EarI	CTCTTC	2 cut(s)	1126, 1554
Eco130I	CCWWGG	1 cut(s)	1008
Eco147I	AGGCCT	1 cut(s)	907
Eco24I	GRGCYC	1 cut(s)	127
Eco47I	GGWCC	1 cut(s)	2383
Eco57I	CTGAAG	3 cut(s)	959, 1146, 2021
EcoNI	CCTNNNNNAGG	1 cut(s)	2390
EcoO109I	RGGNCCY	2 cut(s)	1523, 2383
EcoRI	GAATTC	3 cut(s)	49, 697, 2083
EcoRII	CCWGG	3 cut(s)	328, 907, 1198
EcoT14I	CCWWGG	1 cut(s)	1008
EcoT22I	ATGCAT	1 cut(s)	948
EcoT38I	GRGCYC	1 cut(s)	127
ErhI	CCWWGG	1 cut(s)	1008
FaeI	CATG	7 cut(s)	250, 1056, 1142, 1219, 1449, 1658, 2218
FaqI	GGGAC	2 cut(s)	679, 1953
FatI	CATG	7 cut(s)	246, 1052, 1138, 1215, 1445, 1654, 2214
FauNDI	CATATG	2 cut(s)	676, 1838
FbaI	TGATCA	3 cut(s)	313, 415, 2271
FblI	GTMKAC	4 cut(s)	231, 480, 966, 1905
FokI	GGATG	8 cut(s)	131, 312, 933, 1102, 1442, 1487, 1593, 1889
FriOI	GRGCYC	1 cut(s)	127
FspBI	CTAG	4 cut(s)	1146, 1151, 1377, 2117
GlaI	GCGC	2 cut(s)	987, 1081
GsuI	CTGGAG	1 cut(s)	669
HaeIII	GGCC	5 cut(s)	907, 1525, 1536, 2002, 2335
HapII	CCGG	6 cut(s)	1016, 1516, 1581, 1639, 1980, 2261
HgaI	GACGC	2 cut(s)	491, 927
HhaI	GCGC	2 cut(s)	988, 1082
Hin1II	CATG	7 cut(s)	250, 1056, 1142, 1219, 1449, 1658, 2218
Hin6I	GCGC	2 cut(s)	986, 1080
HinP1I	GCGC	2 cut(s)	986, 1080
HincII	GTYRAC	1 cut(s)	967
HindII	GTYRAC	1 cut(s)	967
HindIII	AAGCTT	1 cut(s)	2242
HpaII	CCGG	6 cut(s)	1016, 1516, 1581, 1639, 1980, 2261
Hpy166II	GTNNAC	7 cut(s)	232, 481, 967, 1756, 1852, 1906, 2212
Hpy8I	GTNNAC	7 cut(s)	232, 481, 967, 1756, 1852, 1906, 2212
HpyCH4III	ACNGT	9 cut(s)	375, 503, 619, 1389, 1419, 1546, 1821, 1965, 2373
HpyCH4IV	ACGT	2 cut(s)	301, 1740
HpyF10VI	GCNNNNNNNGC	5 cut(s)	122, 1709, 1770, 2107, 2351
HpyF3I	CTNAG	6 cut(s)	444, 850, 1624, 1974, 2129, 2206
HpySE526I	ACGT	2 cut(s)	301, 1740
Hsp92II	CATG	7 cut(s)	250, 1056, 1142, 1219, 1449, 1658, 2218
HspAI	GCGC	2 cut(s)	986, 1080
Ksp22I	TGATCA	3 cut(s)	313, 415, 2271
LmnI	GCTCC	2 cut(s)	130, 1012
LweI	GCATC	9 cut(s)	16, 644, 775, 933, 955, 1124, 1139, 1420, 1615
MaeI	CTAG	4 cut(s)	1146, 1151, 1377, 2117
MaeII	ACGT	2 cut(s)	301, 1740
MaeIII	GTNAC	5 cut(s)	543, 1100, 1141, 1399, 1804
MfeI	CAATTG	2 cut(s)	1158, 1464
MflI	RGATCY	7 cut(s)	168, 892, 1303, 1487, 1650, 1729, 1870
MhlI	GDGCHC	2 cut(s)	127, 736
MlyI	GAGTC	3 cut(s)	1157, 1985, 2070
MmeI	TCCRAC	2 cut(s)	1669, 1726
Mph1103I	ATGCAT	1 cut(s)	948
MroXI	GAANNNNTTC	2 cut(s)	845, 1209
MseI	TTAA	4 cut(s)	239, 957, 980, 1590
MslI	CAYNNNNRTG	2 cut(s)	330, 1450
MspA1I	CMGCKG	2 cut(s)	319, 671
MspI	CCGG	6 cut(s)	1016, 1516, 1581, 1639, 1980, 2261
MspR9I	CCNGG	7 cut(s)	330, 909, 1017, 1200, 1582, 1640, 2261
MunI	CAATTG	2 cut(s)	1158, 1464
Mva1269I	GAATGC	1 cut(s)	1705
MvaI	CCWGG	3 cut(s)	330, 909, 1200
MvnI	CGCG	1 cut(s)	921
MwoI	GCNNNNNNNGC	5 cut(s)	122, 1709, 1770, 2107, 2351
NciI	CCSGG	4 cut(s)	1017, 1582, 1640, 2261
NdeI	CATATG	2 cut(s)	676, 1838
NheI	GCTAGC	1 cut(s)	1150
NlaIII	CATG	7 cut(s)	250, 1056, 1142, 1219, 1449, 1658, 2218
NlaIV	GGNNCC	6 cut(s)	126, 184, 1014, 1058, 1305, 1524
NmeAIII	GCCGAG	2 cut(s)	1978, 2204
NsiI	ATGCAT	1 cut(s)	948
PagI	TCATGA	1 cut(s)	1215
PceI	AGGCCT	1 cut(s)	907
PctI	GAATGC	1 cut(s)	1705
PdmI	GAANNNNTTC	2 cut(s)	845, 1209
PfeI	GAWTC	8 cut(s)	40, 218, 362, 389, 1172, 1205, 1635, 2320
PflFI	GACNNNGTC	1 cut(s)	1742
PleI	GAGTC	3 cut(s)	1157, 1984, 2069
PpsI	GAGTC	3 cut(s)	1157, 1984, 2069
PpuMI	RGGWCCY	1 cut(s)	2383
Psp5II	RGGWCCY	1 cut(s)	2383
Psp6I	CCWGG	3 cut(s)	328, 907, 1198
PspGI	CCWGG	3 cut(s)	328, 907, 1198
PspN4I	GGNNCC	6 cut(s)	126, 184, 1014, 1058, 1305, 1524
PspPI	GGNCC	3 cut(s)	1523, 2333, 2383
PspPPI	RGGWCCY	1 cut(s)	2383
PsrI	GAACNNNNNNTAC	2 cut(s)	1093, 1125
PstI	CTGCAG	1 cut(s)	1711
PsuI	RGATCY	7 cut(s)	168, 892, 1303, 1487, 1650, 1729, 1870
PsyI	GACNNNGTC	1 cut(s)	1742
PvuII	CAGCTG	2 cut(s)	319, 671
RsaI	GTAC	4 cut(s)	655, 752, 1416, 2370
RsaNI	GTAC	4 cut(s)	654, 751, 1415, 2369
RseI	CAYNNNNRTG	2 cut(s)	330, 1450
SalI	GTCGAC	1 cut(s)	965
SaqAI	TTAA	4 cut(s)	239, 957, 980, 1590
Sau96I	GGNCC	3 cut(s)	1523, 2333, 2383
SchI	GAGTC	3 cut(s)	1157, 1985, 2070
ScrFI	CCNGG	7 cut(s)	330, 909, 1017, 1200, 1582, 1640, 2261
SduI	GDGCHC	2 cut(s)	127, 736
SfaNI	GCATC	9 cut(s)	16, 644, 775, 933, 955, 1124, 1139, 1420, 1615
SfcI	CTRYAG	2 cut(s)	1707, 2229
SinI	GGWCC	1 cut(s)	2383
SmiMI	CAYNNNNRTG	2 cut(s)	330, 1450
SseBI	AGGCCT	1 cut(s)	907
SsiI	CCGC	1 cut(s)	340
SspMI	CTAG	4 cut(s)	1146, 1151, 1377, 2117
StuI	AGGCCT	1 cut(s)	907
StyD4I	CCNGG	7 cut(s)	328, 907, 1015, 1198, 1580, 1638, 2259
StyI	CCWWGG	1 cut(s)	1008
TaaI	ACNGT	9 cut(s)	375, 503, 619, 1389, 1419, 1546, 1821, 1965, 2373
TaiI	ACGT	2 cut(s)	304, 1743
TaqI	TCGA	4 cut(s)	966, 2026, 2064, 2087
TatI	WGTACW	2 cut(s)	653, 2368
TauI	GCSGC	1 cut(s)	343
TfiI	GAWTC	8 cut(s)	40, 218, 362, 389, 1172, 1205, 1635, 2320
Tru1I	TTAA	4 cut(s)	239, 957, 980, 1590
Tru9I	TTAA	4 cut(s)	239, 957, 980, 1590
TscAI	CASTG	6 cut(s)	378, 390, 942, 1111, 1837, 2214
TspDTI	ATGAA	5 cut(s)	250, 1337, 1926, 1974, 2365
TspGWI	ACGGA	1 cut(s)	1031
TspRI	CASTG	6 cut(s)	378, 390, 942, 1111, 1837, 2214
Tth111I	GACNNNGTC	1 cut(s)	1742
VpaK11BI	GGWCC	1 cut(s)	2383
XagI	CCTNNNNNAGG	1 cut(s)	2390
XapI	RAATTY	6 cut(s)	49, 136, 538, 697, 976, 2083
XmiI	GTMKAC	4 cut(s)	231, 480, 966, 1905
XmnI	GAANNNNTTC	2 cut(s)	845, 1209
XspI	CTAG	4 cut(s)	1146, 1151, 1377, 2117
Zsp2I	ATGCAT	1 cut(s)	948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.