Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G39620 AT2G40720 |
| fragaria_vesca | FvH4_7g21891 |
| malus_domestica | MD07G1193300.v1.1 |
| prunus_persica | Prupe.2G231000_v2.0.a1 |
| pyrus_communis | pycom07g18250 |
| rosa_chinensis | RchiOBHm_Chr1g0366141 |
| rosa_laevigata | RLG00000027363 |
| rosa_multiflora | Rmu_co8484073.1_g000001 Rmu_sc0003987.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00290450 Rroxscaffold_4G00290460 |
| rosa_rugosa | Rorug01G0327800 Rorug01G0327900 |
| rosa_samantha | Rh1AG335900 Rh1BG297300 Rh1CG313300 Rh1DG329100 |
| rosa_wichuraiana | Rw1G029800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1835 |
| Acc36I | ACCTGC | 1 cut(s) | 2393 |
| Acc65I | GGTACC | 1 cut(s) | 261 |
| AccB1I | GGYRCC | 2 cut(s) | 261, 2557 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2803 |
| AccI | GTMKAC | 1 cut(s) | 181 |
| AccII | CGCG | 1 cut(s) | 259 |
| AciI | CCGC | 3 cut(s) | 257, 259, 770 |
| AclI | AACGTT | 1 cut(s) | 1457 |
| AclWI | GGATC | 1 cut(s) | 785 |
| AcsI | RAATTY | 9 cut(s) | 219, 373, 809, 865, 1317, 1434, 1940, 2427, 2533 |
| AcuI | CTGAAG | 3 cut(s) | 69, 137, 1416 |
| AcyI | GRCGYC | 1 cut(s) | 1695 |
| AdeI | CACNNNGTG | 1 cut(s) | 785 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 625, 1030, 1596, 1754, 2567, 2574, 2803 |
| AflII | CTTAAG | 1 cut(s) | 2107 |
| AflIII | ACRYGT | 3 cut(s) | 107, 678, 704 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 295, 2317 |
| AjnI | CCWGG | 2 cut(s) | 1011, 2773 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1583, 1615, 2136, 2168 |
| Alw26I | GTCTC | 5 cut(s) | 282, 303, 334, 341, 1413 |
| AlwI | GGATC | 1 cut(s) | 785 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 215 |
| AoxI | GGCC | 5 cut(s) | 10, 36, 62, 2436, 2794 |
| ApeKI | GCWGC | 9 cut(s) | 206, 209, 584, 637, 1004, 1175, 2102, 2282, 2669 |
| ApoI | RAATTY | 9 cut(s) | 219, 373, 809, 865, 1317, 1434, 1940, 2427, 2533 |
| AseI | ATTAAT | 1 cut(s) | 2541 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 813 |
| Asp718I | GGTACC | 1 cut(s) | 261 |
| AspLEI | GCGC | 1 cut(s) | 92 |
| AspS9I | GGNCC | 8 cut(s) | 10, 36, 62, 663, 1033, 2350, 2794, 2806 |
| AsuC2I | CCSGG | 1 cut(s) | 1037 |
| AsuHPI | GGTGA | 5 cut(s) | 104, 1703, 1876, 2732, 2837 |
| AvaII | GGWCC | 4 cut(s) | 663, 1033, 2350, 2806 |
| BanI | GGYRCC | 2 cut(s) | 261, 2557 |
| BbsI | GAAGAC | 1 cut(s) | 75 |
| BbvI | GCAGC | 9 cut(s) | 218, 221, 571, 649, 991, 1162, 2114, 2294, 2656 |
| BccI | CCATC | 8 cut(s) | 372, 1057, 1163, 2236, 2329, 2463, 2709, 2817 |
| BciT130I | CCWGG | 2 cut(s) | 1013, 2775 |
| BciVI | GTATCC | 3 cut(s) | 816, 1588, 1976 |
| BclI | TGATCA | 1 cut(s) | 462 |
| BcnI | CCSGG | 1 cut(s) | 1037 |
| BcoDI | GTCTC | 5 cut(s) | 282, 303, 334, 341, 1413 |
| BfaI | CTAG | 4 cut(s) | 1574, 1802, 2661, 2712 |
| BfmI | CTRYAG | 1 cut(s) | 2085 |
| BfrI | CTTAAG | 1 cut(s) | 2107 |
| BfuAI | ACCTGC | 1 cut(s) | 2393 |
| BfuI | GTATCC | 3 cut(s) | 816, 1588, 1976 |
| BglII | AGATCT | 1 cut(s) | 2494 |
| BisI | GCNGC | 9 cut(s) | 207, 210, 585, 638, 1005, 1176, 2103, 2283, 2670 |
| BlsI | GCNGC | 9 cut(s) | 208, 211, 586, 639, 1006, 1177, 2104, 2284, 2671 |
| BmcAI | AGTACT | 1 cut(s) | 1165 |
| Bme1390I | CCNGG | 3 cut(s) | 1013, 1037, 2775 |
| Bme18I | GGWCC | 4 cut(s) | 663, 1033, 2350, 2806 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 295, 2317 |
| BmgT120I | GGNCC | 8 cut(s) | 10, 36, 62, 663, 1033, 2350, 2794, 2806 |
| BmiI | GGNNCC | 6 cut(s) | 263, 664, 843, 873, 2559, 2581 |
| BmrFI | CCNGG | 3 cut(s) | 1013, 1037, 2775 |
| BmsI | GCATC | 5 cut(s) | 209, 991, 1017, 1741, 2554 |
| BpiI | GAAGAC | 1 cut(s) | 75 |
| BpmI | CTGGAG | 2 cut(s) | 860, 2757 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2755 |
| BpuEI | CTTGAG | 1 cut(s) | 2675 |
| BpuMI | CCSGG | 1 cut(s) | 1037 |
| BsaHI | GRCGYC | 1 cut(s) | 1695 |
| BsaI | GGTCTC | 1 cut(s) | 341 |
| BsaJI | CCNNGG | 1 cut(s) | 257 |
| BsaWI | WCCGGW | 1 cut(s) | 1861 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 625, 1030, 1596, 1754, 2567, 2574, 2803 |
| Bse1I | ACTGG | 2 cut(s) | 666, 2552 |
| Bse3DI | GCAATG | 3 cut(s) | 763, 1519, 2280 |
| BseBI | CCWGG | 2 cut(s) | 1013, 2775 |
| BseDI | CCNNGG | 1 cut(s) | 257 |
| BseGI | GGATG | 4 cut(s) | 1045, 1125, 2607, 2783 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 625, 1030, 1596, 1754, 2567, 2574, 2803 |
| BseMI | GCAATG | 3 cut(s) | 763, 1519, 2280 |
| BseMII | CTCAG | 3 cut(s) | 345, 1173, 1926 |
| BseNI | ACTGG | 2 cut(s) | 666, 2552 |
| BseRI | GAGGAG | 1 cut(s) | 263 |
| BseXI | GCAGC | 9 cut(s) | 218, 221, 571, 649, 991, 1162, 2114, 2294, 2656 |
| BsgI | GTGCAG | 3 cut(s) | 1344, 1503, 1596 |
| Bsh1236I | CGCG | 1 cut(s) | 259 |
| BshFI | GGCC | 5 cut(s) | 12, 38, 64, 2438, 2796 |
| BshNI | GGYRCC | 2 cut(s) | 261, 2557 |
| BsiSI | CCGG | 3 cut(s) | 1036, 1862, 2568 |
| BslFI | GGGAC | 2 cut(s) | 676, 1069 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 625, 1030, 1596, 1754, 2567, 2574, 2803 |
| BsmAI | GTCTC | 5 cut(s) | 282, 303, 334, 341, 1413 |
| BsmBI | CGTCTC | 1 cut(s) | 334 |
| BsmFI | GGGAC | 2 cut(s) | 676, 1069 |
| BsmI | GAATGC | 4 cut(s) | 194, 1638, 1666, 2275 |
| BsnI | GGCC | 5 cut(s) | 12, 38, 64, 2438, 2796 |
| Bso31I | GGTCTC | 1 cut(s) | 341 |
| Bsp143I | GATC | 8 cut(s) | 70, 159, 324, 462, 790, 1804, 2494, 2738 |
| BspACI | CCGC | 3 cut(s) | 257, 259, 770 |
| BspANI | GGCC | 5 cut(s) | 12, 38, 64, 2438, 2796 |
| BspCNI | CTCAG | 3 cut(s) | 344, 1174, 1925 |
| BspFNI | CGCG | 1 cut(s) | 259 |
| BspHI | TCATGA | 1 cut(s) | 1720 |
| BspLI | GGNNCC | 6 cut(s) | 263, 664, 843, 873, 2559, 2581 |
| BspMAI | CTGCAG | 1 cut(s) | 2089 |
| BspMI | ACCTGC | 1 cut(s) | 2393 |
| BspPI | GGATC | 1 cut(s) | 785 |
| BspQI | GCTCTTC | 1 cut(s) | 113 |
| BspT107I | GGYRCC | 2 cut(s) | 261, 2557 |
| BspTI | CTTAAG | 1 cut(s) | 2107 |
| BspTNI | GGTCTC | 1 cut(s) | 341 |
| BsrDI | GCAATG | 3 cut(s) | 763, 1519, 2280 |
| BsrI | ACTGG | 2 cut(s) | 666, 2552 |
| BssECI | CCNNGG | 1 cut(s) | 257 |
| BssMI | GATC | 8 cut(s) | 70, 159, 324, 462, 790, 1804, 2494, 2738 |
| BssNI | GRCGYC | 1 cut(s) | 1695 |
| Bst2UI | CCWGG | 2 cut(s) | 1013, 2775 |
| Bst4CI | ACNGT | 3 cut(s) | 186, 620, 686 |
| Bst6I | CTCTTC | 4 cut(s) | 113, 283, 594, 2334 |
| BstACI | GRCGYC | 1 cut(s) | 1695 |
| BstAFI | CTTAAG | 1 cut(s) | 2107 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 1073, 1521, 1890, 2279, 2288 |
| BstDEI | CTNAG | 8 cut(s) | 331, 735, 850, 1137, 1182, 1331, 1912, 2755 |
| BstDSI | CCRYGG | 1 cut(s) | 257 |
| BstEII | GGTNACC | 1 cut(s) | 1150 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1028, 1752 |
| BstF5I | GGATG | 4 cut(s) | 1045, 1125, 2607, 2783 |
| BstFNI | CGCG | 1 cut(s) | 259 |
| BstHHI | GCGC | 1 cut(s) | 92 |
| BstKTI | GATC | 8 cut(s) | 73, 162, 327, 465, 793, 1807, 2497, 2741 |
| BstMAI | GTCTC | 5 cut(s) | 282, 303, 334, 341, 1413 |
| BstMBI | GATC | 8 cut(s) | 70, 159, 324, 462, 790, 1804, 2494, 2738 |
| BstNI | CCWGG | 2 cut(s) | 1013, 2775 |
| BstNSI | RCATGY | 9 cut(s) | 111, 682, 708, 1377, 1482, 1888, 1990, 2402, 2598 |
| BstPI | GGTNACC | 1 cut(s) | 1150 |
| BstSCI | CCNGG | 3 cut(s) | 1011, 1035, 2773 |
| BstSFI | CTRYAG | 1 cut(s) | 2085 |
| BstUI | CGCG | 1 cut(s) | 259 |
| BstV1I | GCAGC | 9 cut(s) | 218, 221, 571, 649, 991, 1162, 2114, 2294, 2656 |
| BstV2I | GAAGAC | 1 cut(s) | 75 |
| BstX2I | RGATCY | 2 cut(s) | 790, 2494 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 59 |
| BstYI | RGATCY | 2 cut(s) | 790, 2494 |
| BsuI | GTATCC | 3 cut(s) | 816, 1588, 1976 |
| BsuRI | GGCC | 5 cut(s) | 12, 38, 64, 2438, 2796 |
| BtgI | CCRYGG | 1 cut(s) | 257 |
| BtsCI | GGATG | 4 cut(s) | 1045, 1125, 2607, 2783 |
| BtsI | GCAGTG | 3 cut(s) | 885, 2094, 2298 |
| BtsIMutI | CAGTG | 7 cut(s) | 356, 885, 957, 2094, 2298, 2383, 2559 |
| BveI | ACCTGC | 1 cut(s) | 2393 |
| CaiI | CAGNNNCTG | 1 cut(s) | 215 |
| CciI | TCATGA | 1 cut(s) | 1720 |
| CfoI | GCGC | 1 cut(s) | 92 |
| Cfr13I | GGNCC | 8 cut(s) | 10, 36, 62, 663, 1033, 2350, 2794, 2806 |
| Cfr42I | CCGCGG | 1 cut(s) | 260 |
| CseI | GACGC | 3 cut(s) | 1366, 1703, 2321 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1429, 1464, 2535, 2570 |
| DdeI | CTNAG | 8 cut(s) | 331, 735, 850, 1137, 1182, 1331, 1912, 2755 |
| DpnI | GATC | 8 cut(s) | 72, 161, 326, 464, 792, 1806, 2496, 2740 |
| DpnII | GATC | 8 cut(s) | 70, 159, 324, 462, 790, 1804, 2494, 2738 |
| DraI | TTTAAA | 2 cut(s) | 391, 2532 |
| DraIII | CACNNNGTG | 1 cut(s) | 785 |
| DriI | GACNNNNNGTC | 2 cut(s) | 295, 2317 |
| Eam1104I | CTCTTC | 4 cut(s) | 113, 283, 594, 2334 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 295, 2317 |
| EarI | CTCTTC | 4 cut(s) | 113, 283, 594, 2334 |
| Eco31I | GGTCTC | 1 cut(s) | 341 |
| Eco47I | GGWCC | 4 cut(s) | 663, 1033, 2350, 2806 |
| Eco57I | CTGAAG | 3 cut(s) | 69, 137, 1416 |
| Eco91I | GGTNACC | 1 cut(s) | 1150 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1028, 1752 |
| EcoO65I | GGTNACC | 1 cut(s) | 1150 |
| EcoRII | CCWGG | 2 cut(s) | 1011, 2773 |
| EcoT22I | ATGCAT | 3 cut(s) | 196, 1678, 2445 |
| Esp3I | CGTCTC | 1 cut(s) | 334 |
| FaqI | GGGAC | 2 cut(s) | 676, 1069 |
| FauI | CCCGC | 2 cut(s) | 264, 763 |
| FauNDI | CATATG | 1 cut(s) | 2287 |
| FbaI | TGATCA | 1 cut(s) | 462 |
| FblI | GTMKAC | 1 cut(s) | 181 |
| Fnu4HI | GCNGC | 9 cut(s) | 207, 210, 585, 638, 1005, 1176, 2103, 2283, 2670 |
| FokI | GGATG | 4 cut(s) | 1052, 1132, 2614, 2790 |
| Fsp4HI | GCNGC | 9 cut(s) | 207, 210, 585, 638, 1005, 1176, 2103, 2283, 2670 |
| FspBI | CTAG | 4 cut(s) | 1574, 1802, 2661, 2712 |
| GlaI | GCGC | 1 cut(s) | 91 |
| GluI | GCNGC | 9 cut(s) | 207, 210, 585, 638, 1005, 1176, 2103, 2283, 2670 |
| GsuI | CTGGAG | 2 cut(s) | 860, 2757 |
| HaeIII | GGCC | 5 cut(s) | 12, 38, 64, 2438, 2796 |
| HapII | CCGG | 3 cut(s) | 1036, 1862, 2568 |
| HgaI | GACGC | 3 cut(s) | 1366, 1703, 2321 |
| HhaI | GCGC | 1 cut(s) | 92 |
| Hin1I | GRCGYC | 1 cut(s) | 1695 |
| Hin6I | GCGC | 1 cut(s) | 90 |
| HinP1I | GCGC | 1 cut(s) | 90 |
| HincII | GTYRAC | 2 cut(s) | 702, 2311 |
| HindII | GTYRAC | 2 cut(s) | 702, 2311 |
| HindIII | AAGCTT | 2 cut(s) | 573, 2651 |
| HpaI | GTTAAC | 1 cut(s) | 702 |
| HpaII | CCGG | 3 cut(s) | 1036, 1862, 2568 |
| HphI | GGTGA | 5 cut(s) | 104, 1703, 1876, 2732, 2837 |
| Hpy166II | GTNNAC | 5 cut(s) | 182, 616, 702, 2207, 2311 |
| Hpy188III | TCNNGA | 7 cut(s) | 163, 885, 1394, 1418, 1721, 1737, 2459 |
| Hpy8I | GTNNAC | 5 cut(s) | 182, 616, 702, 2207, 2311 |
| HpyAV | CCTTC | 7 cut(s) | 234, 565, 1201, 1300, 1319, 1708, 2411 |
| HpyCH4III | ACNGT | 3 cut(s) | 186, 620, 686 |
| HpyCH4IV | ACGT | 2 cut(s) | 1457, 1655 |
| HpyF3I | CTNAG | 8 cut(s) | 331, 735, 850, 1137, 1182, 1331, 1912, 2755 |
| HpySE526I | ACGT | 2 cut(s) | 1457, 1655 |
| Hsp92I | GRCGYC | 1 cut(s) | 1695 |
| HspAI | GCGC | 1 cut(s) | 90 |
| KpnI | GGTACC | 1 cut(s) | 265 |
| Ksp22I | TGATCA | 1 cut(s) | 462 |
| KspAI | GTTAAC | 1 cut(s) | 702 |
| KspI | CCGCGG | 1 cut(s) | 260 |
| Kzo9I | GATC | 8 cut(s) | 70, 159, 324, 462, 790, 1804, 2494, 2738 |
| LguI | GCTCTTC | 1 cut(s) | 113 |
| LmnI | GCTCC | 2 cut(s) | 841, 2579 |
| Lsp1109I | GCAGC | 9 cut(s) | 218, 221, 571, 649, 991, 1162, 2114, 2294, 2656 |
| LweI | GCATC | 5 cut(s) | 209, 991, 1017, 1741, 2554 |
| MaeI | CTAG | 4 cut(s) | 1574, 1802, 2661, 2712 |
| MaeII | ACGT | 2 cut(s) | 1457, 1655 |
| MaeIII | GTNAC | 8 cut(s) | 110, 1150, 1651, 1691, 1901, 2062, 2319, 2825 |
| MalI | GATC | 8 cut(s) | 72, 161, 326, 464, 792, 1806, 2496, 2740 |
| MboI | GATC | 8 cut(s) | 70, 159, 324, 462, 790, 1804, 2494, 2738 |
| MboII | GAAGA | 8 cut(s) | 75, 130, 270, 611, 800, 1594, 2351, 2776 |
| MflI | RGATCY | 2 cut(s) | 790, 2494 |
| MlyI | GAGTC | 4 cut(s) | 92, 638, 2580, 2647 |
| MmeI | TCCRAC | 2 cut(s) | 364, 2451 |
| Mph1103I | ATGCAT | 3 cut(s) | 196, 1678, 2445 |
| MroXI | GAANNNNTTC | 1 cut(s) | 813 |
| MslI | CAYNNNNRTG | 4 cut(s) | 924, 1139, 1221, 1524 |
| MspA1I | CMGCKG | 2 cut(s) | 259, 1916 |
| MspCI | CTTAAG | 1 cut(s) | 2107 |
| MspI | CCGG | 3 cut(s) | 1036, 1862, 2568 |
| MspR9I | CCNGG | 3 cut(s) | 1013, 1037, 2775 |
| Mva1269I | GAATGC | 4 cut(s) | 194, 1638, 1666, 2275 |
| MvaI | CCWGG | 2 cut(s) | 1013, 2775 |
| MvnI | CGCG | 1 cut(s) | 259 |
| NciI | CCSGG | 1 cut(s) | 1037 |
| NdeI | CATATG | 1 cut(s) | 2287 |
| NdeII | GATC | 8 cut(s) | 70, 159, 324, 462, 790, 1804, 2494, 2738 |
| NlaIV | GGNNCC | 6 cut(s) | 263, 664, 843, 873, 2559, 2581 |
| NmuCI | GTSAC | 5 cut(s) | 110, 1691, 2062, 2319, 2825 |
| NsiI | ATGCAT | 3 cut(s) | 196, 1678, 2445 |
| NspI | RCATGY | 9 cut(s) | 111, 682, 708, 1377, 1482, 1888, 1990, 2402, 2598 |
| PaeI | GCATGC | 2 cut(s) | 1377, 2402 |
| PagI | TCATGA | 1 cut(s) | 1720 |
| PciI | ACATGT | 3 cut(s) | 107, 678, 704 |
| PciSI | GCTCTTC | 1 cut(s) | 113 |
| PctI | GAATGC | 4 cut(s) | 194, 1638, 1666, 2275 |
| PdmI | GAANNNNTTC | 1 cut(s) | 813 |
| PfeI | GAWTC | 7 cut(s) | 25, 422, 902, 1193, 1244, 2360, 2723 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2803 |
| PfoI | TCCNGGA | 1 cut(s) | 2773 |
| PkrI | GCNGC | 9 cut(s) | 208, 211, 586, 639, 1006, 1177, 2104, 2284, 2671 |
| PleI | GAGTC | 4 cut(s) | 92, 638, 2579, 2646 |
| PpsI | GAGTC | 4 cut(s) | 92, 638, 2579, 2646 |
| PscI | ACATGT | 3 cut(s) | 107, 678, 704 |
| PshBI | ATTAAT | 1 cut(s) | 2541 |
| PsiI | TTATAA | 1 cut(s) | 1835 |
| Psp1406I | AACGTT | 1 cut(s) | 1457 |
| Psp6I | CCWGG | 2 cut(s) | 1011, 2773 |
| PspEI | GGTNACC | 1 cut(s) | 1150 |
| PspGI | CCWGG | 2 cut(s) | 1011, 2773 |
| PspN4I | GGNNCC | 6 cut(s) | 263, 664, 843, 873, 2559, 2581 |
| PspPI | GGNCC | 8 cut(s) | 10, 36, 62, 663, 1033, 2350, 2794, 2806 |
| PstI | CTGCAG | 1 cut(s) | 2089 |
| PstNI | CAGNNNCTG | 1 cut(s) | 215 |
| PsuI | RGATCY | 2 cut(s) | 790, 2494 |
| PvuII | CAGCTG | 1 cut(s) | 1916 |
| RseI | CAYNNNNRTG | 4 cut(s) | 924, 1139, 1221, 1524 |
| SacII | CCGCGG | 1 cut(s) | 260 |
| SapI | GCTCTTC | 1 cut(s) | 113 |
| SatI | GCNGC | 9 cut(s) | 207, 210, 585, 638, 1005, 1176, 2103, 2283, 2670 |
| Sau3AI | GATC | 8 cut(s) | 70, 159, 324, 462, 790, 1804, 2494, 2738 |
| Sau96I | GGNCC | 8 cut(s) | 10, 36, 62, 663, 1033, 2350, 2794, 2806 |
| ScaI | AGTACT | 1 cut(s) | 1165 |
| SchI | GAGTC | 4 cut(s) | 92, 638, 2580, 2647 |
| ScrFI | CCNGG | 3 cut(s) | 1013, 1037, 2775 |
| SfaNI | GCATC | 5 cut(s) | 209, 991, 1017, 1741, 2554 |
| SfcI | CTRYAG | 1 cut(s) | 2085 |
| Sfr303I | CCGCGG | 1 cut(s) | 260 |
| SgrBI | CCGCGG | 1 cut(s) | 260 |
| SinI | GGWCC | 4 cut(s) | 663, 1033, 2350, 2806 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 924, 1139, 1221, 1524 |
| SmlI | CTYRAG | 2 cut(s) | 2107, 2654 |
| SmoI | CTYRAG | 2 cut(s) | 2107, 2654 |
| SphI | GCATGC | 2 cut(s) | 1377, 2402 |
| SsiI | CCGC | 3 cut(s) | 257, 259, 770 |
| SspI | AATATT | 1 cut(s) | 1543 |
| SspMI | CTAG | 4 cut(s) | 1574, 1802, 2661, 2712 |
| StyD4I | CCNGG | 3 cut(s) | 1011, 1035, 2773 |
| TaaI | ACNGT | 3 cut(s) | 186, 620, 686 |
| TaiI | ACGT | 2 cut(s) | 1460, 1658 |
| TaqI | TCGA | 4 cut(s) | 69, 420, 502, 1417 |
| TatI | WGTACW | 5 cut(s) | 489, 578, 681, 978, 1163 |
| TfiI | GAWTC | 7 cut(s) | 25, 422, 902, 1193, 1244, 2360, 2723 |
| TscAI | CASTG | 7 cut(s) | 363, 885, 957, 2094, 2298, 2383, 2559 |
| TseFI | GTSAC | 5 cut(s) | 110, 1691, 2062, 2319, 2825 |
| TseI | GCWGC | 9 cut(s) | 206, 209, 584, 637, 1004, 1175, 2102, 2282, 2669 |
| Tsp45I | GTSAC | 5 cut(s) | 110, 1691, 2062, 2319, 2825 |
| TspRI | CASTG | 7 cut(s) | 363, 885, 957, 2094, 2298, 2383, 2559 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2803 |
| Vha464I | CTTAAG | 1 cut(s) | 2107 |
| VpaK11BI | GGWCC | 4 cut(s) | 663, 1033, 2350, 2806 |
| VspI | ATTAAT | 1 cut(s) | 2541 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1028, 1752 |
| XapI | RAATTY | 9 cut(s) | 219, 373, 809, 865, 1317, 1434, 1940, 2427, 2533 |
| XceI | RCATGY | 9 cut(s) | 111, 682, 708, 1377, 1482, 1888, 1990, 2402, 2598 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2781 |
| XmiI | GTMKAC | 1 cut(s) | 181 |
| XmnI | GAANNNNTTC | 1 cut(s) | 813 |
| XspI | CTAG | 4 cut(s) | 1574, 1802, 2661, 2712 |
| ZrmI | AGTACT | 1 cut(s) | 1165 |
| Zsp2I | ATGCAT | 3 cut(s) | 196, 1678, 2445 |