Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0011932

Physical Location & Seq

Genomic Coordinates Forward (+)

57008555 .. 57011203

Gene Structure 2649 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG335900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGAAACAATTCCATGCAGCTACCAAGAATTATCAACACTATCTTGGCCTATTCTCTTCATGCAAAGATTTGAAGTCCCTGCTTCAAATCCATGCCCAATTGATAGTCTCAGGTCTCCAACAACACCCTTCCACACTGACCCATCTCATAAATTCCTACTCTTCCTTCCAAAGATGTAATTTTTCGCGCTCAGTTTTCAATTCTGCGCAAAACCCAAGTGTTAGATTATGGAACTACATGATCAGAGTTCATACCAGAGCAAAAGAATTCAAACAAGCTCAAGAAATGTACCATTCTTTGTTAAAGCTAGGTCTAGAGCCAGACAAGTATACCTTCAACTTTGCCCTGAAGGCTTGCACTGCTGCATTGGATTTTGAAGAGGGTGTATTGGTGCACCGTGAAGTAGAGCGTAAAGGGTTAGAGTATGATGTGTTTATTGGGACCAGTCTGATTGATATGTATTGTAAAATGGGGGCGGTGAAATGTGCAGGAGAGGTGTTTGATAGAATGCCTGAGAAAGATGTTGTGGCATGTAATGCTTTGATTGCCGGGTTGGCGAAAAGCGAGGATCCTAAGGAAGCAGTGGAGTTTTTTAGGAGGATGCAATGTTGGGGGATGGGGGTGAATTTAGTGAGCTTGTTTAACTTGGTTCCAGCAGTGTCTAGATTGGGAGATATTGATTCTTGTAGGTGTATTCATGGGTATGTGGTTAGGAGGGAGTTGGGTTCAGAGGTTTCAAATGGGTTGATTGATATGTATTGCAAGTGTGGAGATGTGGATGTTGCTCGCAGGGTTTTCGAGATGGTGCAGGGTGGTGGTGATGATGGTGGTGTTTTGTGGGGGACAATGATGGCGGGGTACGCGAGTAATGGATGTTTTGTTGAGGTTTTGGAGTTGTTTGATTGCTTGAAAGGGGAGGGGAGTAGAATGAATAAGGTTTGTATCATGAGTGCACTTTTGGCTGCTACTGAGATGAGAGATTTGGAGAAAGGGAGAGAGATCCATCGTTGTGCTTTAGAAGTAGAGTTAGATTCTGATGTTTCGGTTGCTACTTCTATAACGACCATGTATGCAAAATGTGGAGACATAGAGAAGGCAATACAATTGTTTGAGAGACTTGGGGAAAGAGATTTAGTTGCTTGGTCTGCACTTATATCTGCTTGTGTCCAGTCTGGTTTTCCTGAAGTGGCATTGTCTCTCTTTCGAGATAGGCAGAATGAAAATCTCAAACCATGTGGCATAACATTGGTCAGCATCCTTGCTGCATGTGGGGAGCTTTCATATCTGAAATTTGGTAAGAGCATACATTGCTATGCTGTTAAGGCCGATATTGATTCGGACATTTCTACTGGGACAGCCCTAGTCTCCATGTATGCTAAATGTGGATTCTTTACTCCTGCCTTGATTATATTCAACAGAATGCCATCTAAAGATGTTGTGACGTGGAATGCACTTATAAATGCATATACCCAAATAGGTGATGTCTACCATGCTATTGATATGTTGGATGAGTTATGGTTCTCTGGAATAAAACCTGATGCAGGAACGATGGTGGGTATGGTCTCGGCTTGTAGCTTGTTAAATGATCTAAATCATGGTACTTGTATTCATGGACGAATTATAAAGAATGGGTTTGAACATGATGCACCTTTGAAAAATGCTCTTATTGGCATGTATTGCAAATGTGGTGACATTTCGTCAGCTGAATTTCTATTTAATAGAACAAAATTAATGAAAGATGTGGTATCCTGGAATGTAATGATTGCAGGATACATGCAGGGTGGATATGCCAGGGAAGCTATATCTGTGTTTCACCAGATGAAATTAGAGAACTGTCAGCCTAATTTAGTCACATTTGTTAGCATCCTTCCTGCAGTGGCATATCTAGCAGCATTACGAGAGGGCATGGCTTTTCATGCCTGCATTATCCAGAATGGGTTTCTATCTAATACACTTGTGGGAAATTGTCTTATTGACATGTATGCTAAATGCGGACAGCTCGATCATTCAGAAAAATGCTTTGAAGAGATGGAACTCAAGGACAAAGTTTCGTGGAACGCAATGCTTGCAGCATGGGAGGATGCTTGCAAGACAAGATCAAAGATGAAGAGCTATGGGTCGAAGAAAATGCCAGGATGTAGTTGGGTAGAGGTCCAAAACAGGGTTCATACACTACAGGCGGGTGACTACAACTACCCCCAACTTGGAACAGAGAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

739

Amino Acids

82.18

Weight (kDa)

6.2

Isoelectric Point (pI)

38.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	72 - 119	2.6e-08	PPR repeat family
PPR_2	PF13041	173 - 210	5.6e-07	PPR repeat family
PPR_2	PF13041	477 - 524	1.9e-08	PPR repeat family
PPR_3	PF13812	576 - 625	1.8e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	579 - 623	3.5e-12	PPR repeat family
PPR	PF01535	582 - 612	5.7e-07	PPR repeat
E_motif	PF20431	690 - 717	4.8e-06	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39620 AT2G40720
fragaria_vesca	FvH4_7g21891
malus_domestica	MD07G1193300.v1.1
prunus_persica	Prupe.2G231000_v2.0.a1
pyrus_communis	pycom07g18250
rosa_chinensis	RchiOBHm_Chr1g0366141
rosa_laevigata	RLG00000027363
rosa_multiflora	Rmu_co8484073.1_g000001 Rmu_sc0003987.1_g000001
rosa_roxburghii	Rroxscaffold_4G00290450 Rroxscaffold_4G00290460
rosa_rugosa	Rorug01G0327800 Rorug01G0327900
rosa_samantha	Rh1AG335900 Rh1BG297300 Rh1CG313300 Rh1DG329100
rosa_wichuraiana	Rw1G029800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1457, 1622
Acc16I	TGCGCA	1 cut(s)	207
AccI	GTMKAC	2 cut(s)	329, 1485
AccII	CGCG	2 cut(s)	187, 863
AciI	CCGC	4 cut(s)	476, 854, 1992, 2180
AclWI	GGATC	3 cut(s)	563, 576, 994
AcsI	RAATTY	5 cut(s)	151, 266, 625, 1289, 1706
AcuI	CTGAAG	2 cut(s)	368, 1203
AfaI	GTAC	3 cut(s)	290, 860, 1600
AfiI	CCNNNNNNNGG	3 cut(s)	1541, 2161, 2204
AflIII	ACRYGT	1 cut(s)	1977
AhdI	GACNNNNNGTC	1 cut(s)	1696
AjiI	CACGTC	1 cut(s)	1443
AjnI	CCWGG	3 cut(s)	1748, 1790, 2131
AjuI	GAANNNNNNNTTGG	2 cut(s)	2148, 2180
Alw21I	GWGCWC	2 cut(s)	396, 955
Alw26I	GTCTC	7 cut(s)	112, 119, 1077, 1108, 1200, 1369, 1567
Alw44I	GTGCAC	2 cut(s)	392, 951
AlwI	GGATC	3 cut(s)	563, 576, 994
AoxI	GGCC	2 cut(s)	46, 1323
ApaLI	GTGCAC	2 cut(s)	392, 951
ApeKI	GCWGC	6 cut(s)	17, 362, 962, 1262, 1889, 2069
ApoI	RAATTY	5 cut(s)	151, 266, 625, 1289, 1706
AseI	ATTAAT	1 cut(s)	1730
Asp700I	GAANNNNTTC	1 cut(s)	8
AspLEI	GCGC	2 cut(s)	189, 208
AspS9I	GGNCC	2 cut(s)	441, 2152
AsuC2I	CCSGG	1 cut(s)	550
AsuHPI	GGTGA	7 cut(s)	490, 634, 830, 1490, 1700, 1805, 2195
AvaII	GGWCC	2 cut(s)	441, 2152
AxyI	CCTNAGG	1 cut(s)	573
BaeGI	GKGCMC	2 cut(s)	396, 955
BaeI	ACNNNNGTAYC	2 cut(s)	850, 883
BamHI	GGATCC	1 cut(s)	568
Bbv12I	GWGCWC	2 cut(s)	396, 955
BbvI	GCAGC	6 cut(s)	29, 349, 949, 1249, 1901, 2081
BccI	CCATC	9 cut(s)	150, 610, 796, 818, 844, 1011, 1432, 1543, 2023
BcgI	CGANNNNNNTGC	4 cut(s)	778, 812, 2110, 2144
BciT130I	CCWGG	3 cut(s)	1750, 1792, 2133
BciVI	GTATCC	2 cut(s)	1756, 1763
BclI	TGATCA	1 cut(s)	240
BcnI	CCSGG	1 cut(s)	550
BcoDI	GTCTC	7 cut(s)	112, 119, 1077, 1108, 1200, 1369, 1567
BfaI	CTAG	5 cut(s)	308, 314, 663, 1361, 1886
BfmI	CTRYAG	2 cut(s)	1872, 2174
BfuI	GTATCC	2 cut(s)	1756, 1763
BglI	GCCNNNNNGGC	2 cut(s)	350, 554
BisI	GCNGC	6 cut(s)	18, 363, 963, 1263, 1890, 2070
BlsI	GCNGC	6 cut(s)	19, 364, 964, 1264, 1891, 2071
Bme1390I	CCNGG	4 cut(s)	550, 1750, 1792, 2133
Bme18I	GGWCC	2 cut(s)	441, 2152
BmeRI	GACNNNNNGTC	1 cut(s)	1696
BmgBI	CACGTC	1 cut(s)	1443
BmgT120I	GGNCC	2 cut(s)	441, 2152
BmiI	GGNNCC	3 cut(s)	442, 570, 651
BmrFI	CCNGG	4 cut(s)	550, 1750, 1792, 2133
BmrI	ACTGGG	1 cut(s)	1359
BmsI	GCATC	6 cut(s)	591, 1263, 1528, 1633, 1872, 2071
BmuI	ACTGGG	1 cut(s)	1359
BpuEI	CTTGAG	2 cut(s)	264, 2021
BpuMI	CCSGG	1 cut(s)	550
BsaBI	GATNNNNATC	1 cut(s)	1590
BsaI	GGTCTC	2 cut(s)	119, 1567
BsaJI	CCNNGG	1 cut(s)	1791
Bsc4I	CCNNNNNNNGG	3 cut(s)	1541, 2161, 2204
Bse1I	ACTGG	3 cut(s)	444, 1168, 1354
Bse21I	CCTNAGG	1 cut(s)	573
Bse3DI	GCAATG	3 cut(s)	611, 1306, 2067
Bse8I	GATNNNNATC	1 cut(s)	1590
BseBI	CCWGG	3 cut(s)	1750, 1792, 2133
BseDI	CCNNGG	1 cut(s)	1791
BseGI	GGATG	9 cut(s)	606, 621, 784, 878, 1254, 1513, 1863, 2086, 2141
BseJI	GATNNNNATC	1 cut(s)	1590
BseLI	CCNNNNNNNGG	3 cut(s)	1541, 2161, 2204
BseMI	GCAATG	3 cut(s)	611, 1306, 2067
BseMII	CTCAG	4 cut(s)	123, 204, 504, 960
BseNI	ACTGG	3 cut(s)	444, 1168, 1354
BseSI	GKGCMC	2 cut(s)	396, 955
BseXI	GCAGC	6 cut(s)	29, 349, 949, 1249, 1901, 2081
BsgI	GTGCAG	3 cut(s)	507, 827, 1131
Bsh1236I	CGCG	2 cut(s)	187, 863
BshFI	GGCC	2 cut(s)	48, 1325
BsiHKAI	GWGCWC	2 cut(s)	396, 955
BsiSI	CCGG	1 cut(s)	549
BslFI	GGGAC	4 cut(s)	61, 454, 856, 1366
BslI	CCNNNNNNNGG	3 cut(s)	1541, 2161, 2204
BsmAI	GTCTC	7 cut(s)	112, 119, 1077, 1108, 1200, 1369, 1567
BsmFI	GGGAC	4 cut(s)	61, 454, 856, 1366
BsmI	GAATGC	3 cut(s)	513, 1425, 1453
BsnI	GGCC	2 cut(s)	48, 1325
Bso31I	GGTCTC	2 cut(s)	119, 1567
Bsp1286I	GDGCHC	2 cut(s)	396, 955
Bsp143I	GATC	6 cut(s)	240, 568, 999, 1585, 2002, 2096
BspACI	CCGC	4 cut(s)	476, 854, 1992, 2180
BspANI	GGCC	2 cut(s)	48, 1325
BspCNI	CTCAG	4 cut(s)	122, 203, 505, 961
BspFNI	CGCG	2 cut(s)	187, 863
BspHI	TCATGA	1 cut(s)	945
BspLI	GGNNCC	3 cut(s)	442, 570, 651
BspMAI	CTGCAG	1 cut(s)	1876
BspPI	GGATC	3 cut(s)	563, 576, 994
BspQI	GCTCTTC	1 cut(s)	2102
BspTNI	GGTCTC	2 cut(s)	119, 1567
BsrDI	GCAATG	3 cut(s)	611, 1306, 2067
BsrI	ACTGG	3 cut(s)	444, 1168, 1354
BssECI	CCNNGG	1 cut(s)	1791
BssMI	GATC	6 cut(s)	240, 568, 999, 1585, 2002, 2096
BssNAI	GTATAC	1 cut(s)	330
Bst1107I	GTATAC	1 cut(s)	330
Bst2UI	CCWGG	3 cut(s)	1750, 1792, 2133
Bst4CI	ACNGT	2 cut(s)	398, 1835
Bst6I	CTCTTC	5 cut(s)	61, 166, 372, 2019, 2102
BstAPI	GCANNNNNTGC	4 cut(s)	536, 1308, 1677, 2066
BstC8I	GCNNGC	5 cut(s)	355, 787, 1921, 2067, 2086
BstDEI	CTNAG	5 cut(s)	109, 190, 513, 573, 969
BstENI	CCTNNNNNAGG	1 cut(s)	1539
BstF5I	GGATG	9 cut(s)	606, 621, 784, 878, 1254, 1513, 1863, 2086, 2141
BstFNI	CGCG	2 cut(s)	187, 863
BstHHI	GCGC	2 cut(s)	189, 208
BstKTI	GATC	6 cut(s)	243, 571, 1002, 1588, 2005, 2099
BstMAI	GTCTC	7 cut(s)	112, 119, 1077, 1108, 1200, 1369, 1567
BstMBI	GATC	6 cut(s)	240, 568, 999, 1585, 2002, 2096
BstNI	CCWGG	3 cut(s)	1750, 1792, 2133
BstNSI	RCATGY	5 cut(s)	534, 1269, 1675, 1777, 1981
BstSCI	CCNGG	4 cut(s)	548, 1748, 1790, 2131
BstSFI	CTRYAG	2 cut(s)	1872, 2174
BstSLI	GKGCMC	2 cut(s)	396, 955
BstUI	CGCG	2 cut(s)	187, 863
BstV1I	GCAGC	6 cut(s)	29, 349, 949, 1249, 1901, 2081
BstX2I	RGATCY	2 cut(s)	568, 999
BstYI	RGATCY	2 cut(s)	568, 999
BstZ17I	GTATAC	1 cut(s)	330
Bsu36I	CCTNAGG	1 cut(s)	573
BsuI	GTATCC	2 cut(s)	1756, 1763
BsuRI	GGCC	2 cut(s)	48, 1325
BtrI	CACGTC	1 cut(s)	1443
BtsCI	GGATG	9 cut(s)	606, 621, 784, 878, 1254, 1513, 1863, 2086, 2141
BtsI	GCAGTG	4 cut(s)	357, 588, 663, 1881
BtsIMutI	CAGTG	5 cut(s)	134, 357, 588, 663, 1881
Cac8I	GCNNGC	5 cut(s)	355, 787, 1921, 2067, 2086
CciI	TCATGA	1 cut(s)	945
CfoI	GCGC	2 cut(s)	189, 208
Cfr13I	GGNCC	2 cut(s)	441, 2152
Csp6I	GTAC	3 cut(s)	289, 859, 1599
CspCI	CAANNNNNGTGG	2 cut(s)	1216, 1251
CviQI	GTAC	3 cut(s)	289, 859, 1599
DdeI	CTNAG	5 cut(s)	109, 190, 513, 573, 969
DpnI	GATC	6 cut(s)	242, 570, 1001, 1587, 2004, 2098
DpnII	GATC	6 cut(s)	240, 568, 999, 1585, 2002, 2096
DriI	GACNNNNNGTC	1 cut(s)	1696
Eam1104I	CTCTTC	5 cut(s)	61, 166, 372, 2019, 2102
Eam1105I	GACNNNNNGTC	1 cut(s)	1696
EarI	CTCTTC	5 cut(s)	61, 166, 372, 2019, 2102
Eco31I	GGTCTC	2 cut(s)	119, 1567
Eco47I	GGWCC	2 cut(s)	441, 2152
Eco57I	CTGAAG	2 cut(s)	368, 1203
Eco81I	CCTNAGG	1 cut(s)	573
EcoNI	CCTNNNNNAGG	1 cut(s)	1539
EcoRI	GAATTC	1 cut(s)	266
EcoRII	CCWGG	3 cut(s)	1748, 1790, 2131
EcoT22I	ATGCAT	1 cut(s)	1465
FalI	AAGNNNNNCTT	2 cut(s)	317, 349
FaqI	GGGAC	4 cut(s)	61, 454, 856, 1366
FauI	CCCGC	2 cut(s)	847, 2173
FbaI	TGATCA	1 cut(s)	240
FblI	GTMKAC	2 cut(s)	329, 1485
Fnu4HI	GCNGC	6 cut(s)	18, 363, 963, 1263, 1890, 2070
FokI	GGATG	9 cut(s)	613, 628, 791, 885, 1241, 1520, 1850, 2093, 2148
Fsp4HI	GCNGC	6 cut(s)	18, 363, 963, 1263, 1890, 2070
FspBI	CTAG	5 cut(s)	308, 314, 663, 1361, 1886
FspI	TGCGCA	1 cut(s)	207
GlaI	GCGC	2 cut(s)	188, 207
GluI	GCNGC	6 cut(s)	18, 363, 963, 1263, 1890, 2070
HaeIII	GGCC	2 cut(s)	48, 1325
HapII	CCGG	1 cut(s)	549
HhaI	GCGC	2 cut(s)	189, 208
Hin6I	GCGC	2 cut(s)	187, 206
HinP1I	GCGC	2 cut(s)	187, 206
HinfI	GANTC	4 cut(s)	680, 1031, 1334, 1386
HpaII	CCGG	1 cut(s)	549
HphI	GGTGA	7 cut(s)	490, 634, 830, 1490, 1700, 1805, 2195
Hpy166II	GTNNAC	4 cut(s)	330, 394, 953, 1486
Hpy188I	TCNGA	7 cut(s)	245, 450, 730, 1036, 1287, 1339, 2011
Hpy188III	TCNNGA	9 cut(s)	281, 314, 663, 799, 946, 1181, 1205, 1524, 1930
Hpy8I	GTNNAC	4 cut(s)	330, 394, 953, 1486
HpyAV	CCTTC	6 cut(s)	138, 175, 343, 343, 1087, 1877
HpyCH4III	ACNGT	2 cut(s)	398, 1835
HpyCH4IV	ACGT	1 cut(s)	1442
HpyF3I	CTNAG	5 cut(s)	109, 190, 513, 573, 969
HpySE526I	ACGT	1 cut(s)	1442
HspAI	GCGC	2 cut(s)	187, 206
Ksp22I	TGATCA	1 cut(s)	240
Kzo9I	GATC	6 cut(s)	240, 568, 999, 1585, 2002, 2096
LguI	GCTCTTC	1 cut(s)	2102
LmnI	GCTCC	1 cut(s)	1273
Lsp1109I	GCAGC	6 cut(s)	29, 349, 949, 1249, 1901, 2081
LweI	GCATC	6 cut(s)	591, 1263, 1528, 1633, 1872, 2071
MaeI	CTAG	5 cut(s)	308, 314, 663, 1361, 1886
MaeII	ACGT	1 cut(s)	1442
MaeIII	GTNAC	4 cut(s)	1438, 1688, 1849, 2183
MalI	GATC	6 cut(s)	242, 570, 1001, 1587, 2004, 2098
MboI	GATC	6 cut(s)	240, 568, 999, 1585, 2002, 2096
MboII	GAAGA	6 cut(s)	48, 153, 389, 2036, 2119, 2134
MfeI	CAATTG	2 cut(s)	98, 1103
MflI	RGATCY	2 cut(s)	568, 999
MhlI	GDGCHC	2 cut(s)	396, 955
MmeI	TCCRAC	2 cut(s)	142, 1485
Mph1103I	ATGCAT	1 cut(s)	1465
MroXI	GAANNNNTTC	1 cut(s)	8
MseI	TTAA	6 cut(s)	302, 642, 1320, 1580, 1716, 1730
MslI	CAYNNNNRTG	3 cut(s)	702, 1008, 1311
MspA1I	CMGCKG	1 cut(s)	1703
MspI	CCGG	1 cut(s)	549
MspR9I	CCNGG	4 cut(s)	550, 1750, 1792, 2133
MunI	CAATTG	2 cut(s)	98, 1103
Mva1269I	GAATGC	3 cut(s)	513, 1425, 1453
MvaI	CCWGG	3 cut(s)	1750, 1792, 2133
MvnI	CGCG	2 cut(s)	187, 863
NciI	CCSGG	1 cut(s)	550
NdeII	GATC	6 cut(s)	240, 568, 999, 1585, 2002, 2096
NlaIV	GGNNCC	3 cut(s)	442, 570, 651
NmeAIII	GCCGAG	1 cut(s)	1544
NmuCI	GTSAC	4 cut(s)	1438, 1688, 1849, 2183
NsbI	TGCGCA	1 cut(s)	207
NsiI	ATGCAT	1 cut(s)	1465
NspI	RCATGY	5 cut(s)	534, 1269, 1675, 1777, 1981
PagI	TCATGA	1 cut(s)	945
PciI	ACATGT	1 cut(s)	1977
PciSI	GCTCTTC	1 cut(s)	2102
PctI	GAATGC	3 cut(s)	513, 1425, 1453
PdmI	GAANNNNTTC	1 cut(s)	8
PfeI	GAWTC	4 cut(s)	680, 1031, 1334, 1386
PfoI	TCCNGGA	1 cut(s)	1748
PkrI	GCNGC	6 cut(s)	19, 364, 964, 1264, 1891, 2071
PscI	ACATGT	1 cut(s)	1977
PshBI	ATTAAT	1 cut(s)	1730
PsiI	TTATAA	2 cut(s)	1457, 1622
Psp6I	CCWGG	3 cut(s)	1748, 1790, 2131
PspGI	CCWGG	3 cut(s)	1748, 1790, 2131
PspN4I	GGNNCC	3 cut(s)	442, 570, 651
PspPI	GGNCC	2 cut(s)	441, 2152
PstI	CTGCAG	1 cut(s)	1876
PsuI	RGATCY	2 cut(s)	568, 999
PvuII	CAGCTG	1 cut(s)	1703
RsaI	GTAC	3 cut(s)	290, 860, 1600
RsaNI	GTAC	3 cut(s)	289, 859, 1599
RseI	CAYNNNNRTG	3 cut(s)	702, 1008, 1311
SapI	GCTCTTC	1 cut(s)	2102
SaqAI	TTAA	6 cut(s)	302, 642, 1320, 1580, 1716, 1730
SatI	GCNGC	6 cut(s)	18, 363, 963, 1263, 1890, 2070
Sau3AI	GATC	6 cut(s)	240, 568, 999, 1585, 2002, 2096
Sau96I	GGNCC	2 cut(s)	441, 2152
ScrFI	CCNGG	4 cut(s)	550, 1750, 1792, 2133
SduI	GDGCHC	2 cut(s)	396, 955
SfaNI	GCATC	6 cut(s)	591, 1263, 1528, 1633, 1872, 2071
SfcI	CTRYAG	2 cut(s)	1872, 2174
SinI	GGWCC	2 cut(s)	441, 2152
SmiMI	CAYNNNNRTG	3 cut(s)	702, 1008, 1311
SmlI	CTYRAG	2 cut(s)	279, 2036
SmoI	CTYRAG	2 cut(s)	279, 2036
SsiI	CCGC	4 cut(s)	476, 854, 1992, 2180
SspMI	CTAG	5 cut(s)	308, 314, 663, 1361, 1886
StyD4I	CCNGG	4 cut(s)	548, 1748, 1790, 2131
TaaI	ACNGT	2 cut(s)	398, 1835
TaiI	ACGT	1 cut(s)	1445
TaqI	TCGA	4 cut(s)	798, 1204, 2001, 2120
TfiI	GAWTC	4 cut(s)	680, 1031, 1334, 1386
Tru1I	TTAA	6 cut(s)	302, 642, 1320, 1580, 1716, 1730
Tru9I	TTAA	6 cut(s)	302, 642, 1320, 1580, 1716, 1730
TscAI	CASTG	5 cut(s)	141, 364, 588, 663, 1881
TseFI	GTSAC	4 cut(s)	1438, 1688, 1849, 2183
TseI	GCWGC	6 cut(s)	17, 362, 962, 1262, 1889, 2069
Tsp45I	GTSAC	4 cut(s)	1438, 1688, 1849, 2183
TspRI	CASTG	5 cut(s)	141, 364, 588, 663, 1881
VneI	GTGCAC	2 cut(s)	392, 951
VpaK11BI	GGWCC	2 cut(s)	441, 2152
VspI	ATTAAT	1 cut(s)	1730
XagI	CCTNNNNNAGG	1 cut(s)	1539
XapI	RAATTY	5 cut(s)	151, 266, 625, 1289, 1706
XbaI	TCTAGA	2 cut(s)	313, 662
XceI	RCATGY	5 cut(s)	534, 1269, 1675, 1777, 1981
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2139
XmiI	GTMKAC	2 cut(s)	329, 1485
XmnI	GAANNNNTTC	1 cut(s)	8
XspI	CTAG	5 cut(s)	308, 314, 663, 1361, 1886
Zsp2I	ATGCAT	1 cut(s)	1465

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.