Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011932

Physical Location & Seq

Genomic Coordinates Forward (+)

16987269 .. 16989851

Gene Structure 2583 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G40720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

ATGCGTTTCAAGCTTCACGACGTTCACATTCGTCGGGGACTTTGTTGTGTAGCTGATTCTTACATTTCTCCGGCATCGATTAATTCAGGAATCAGAGCTCTAATTCAGAAAGGAGAGTATCTACAAGCTCTGCATTTATACTCTAAGCATGATGGTTCTTCTCCTTTCTGGACTTCCGTTTTCACGTTTCCTTCTCTACTTAAAGCTTGCTCGGCTCTTACGAATCTCAGTTATGGGAAAACCATTCATGGTTCGGTCGTCGTGTTGGGATGGCGATATGATCCTTTCATTGCAACCTCGCTTGTTAATATGTATGTAAAATGTGGGTTTTTAGATTATGCCGTCCAAGTGTTCGACGGTTGGTCTCAGAGTCAGAGTGGAGTTTCTGCTCGGGATGTTACTGTTTGGAACTCTATGATTGATGGGTACTTCAAATTTCGAAGATTTAAGGAAGGGGTTGGTTGTTTTCGTCGGATGCTGGTGTTTGGTGTAAGACCTGATGCTTTTTCCTTATCCATTGTTGTTAGTGTTATGTGTAAAGAAGGAAACTTTAGGCGGGAAGAAGGGAAACAGATTCATGGATTTATGTTAAGGAATTCGTTAGATACTGATTCGTTCTTGAAAACTGCTTTGATTGATATGTATTTCAAGTTTGGTTTATCGATAGATGCGTGGAGAGTTTTTGTGGAGATTGAGGATAAATCGAATGTTGTACTATGGAATGTGATGATTGTAGGGTTTGGCGGTAGTGGGATCTGTGAATCTAGCTTGGATTTGTATATGCTTGCAAAGAATAACAGTGTCAAGCTTGTTTCCACTTCATTCACTGGAGCTCTTGGTGCGTGTAGTCAAAGTGAGAATTCTGGTTTCGGTAGGCAGATCCATTGCGACGTGGTGAAGATGGGACTTCACAATGACCCGTATGTTTGTACTTCTCTACTGTCAATGTATTCAAAATGTGGTATGGTTGGTGAGGCAGAAACTGTCTTCAGTTGCGTTGTGGATAAAAGACTTGAGATATGGAATGCTATGGTTGCAGCTTATGCAGAGAATGATTATGGGTACTCTGCTTTGGATTTGTTCGGTTTCATGAGGCAGAAAAGTGTCTTGCCTGATTCTTTTACCTTGTCGAATGTTATATCCTGTTGCAGCGTATTGGGATTGTATAACTATGGCAAATCAGTCCACGCAGAACTGTTTAAGAGACCGATACAAAGTACGTCTACAATAGAGAGTGCTTTACTCACTCTGTATTCCAAGTGTGGATGTGATCCTGATGCTTACTTAGTCTTCAAATCAATGGAAGAAAAAGATATGGTTGCGTGGGGCTCCCTGATCTCAGGACTTTGCAAGAATGGGAAATTCAAAGAGGCTCTAAAAGTTTTTGGGGACATGAAAGATGATGATGATAGCTTGAAACCTGATTCTGATATTATGACGAGCGTTACAAACGCATGTGCTGGATTAGAGGCTCTCAGGTTTGGCCTTCAGGTTCATGGCAGCATGATTAAAACTGGGCTAGTGCTGAATGTTTTTGTTGGCAGCTCCCTTATTGATCTGTATTCTAAGTGTGGCTTACCAGAAATGGCTCTCAAAGTTTTCACTAGCATGAGCACGGAAAACATGGTTGCCTGGAATTCAATGATATCTTGCTACAGCCGAAACAACCTTCCAGAACTGTCGATTGACCTTTTCAATCTGATGCTCAGTCAAGGTATCTTCCCTGATTCAGTATCCATCACAAGTGTCCTTGTAGCAATCTCATCGACTGCAAGCTTGCTAAAAGGGAAAAGTCTACATGGTTATACATTAAGACTCGGCATTCCTTCGGATACTCACCTGAAAAACGCTTTGATTGATATGTATGTAAAATGCGGGTTTTCGAAGTATGCAGAGAACATCTTCAAGAAAATGCAGCATAAGAGCTTGATCACTTGGAACCTAATGATATATGGGTATGGATCCCATGGAGATTGTATTACAGCATTGAGTCTGTTCGATGAGATGAAAAAGGCAGGAGAATCGCCCGATGATGTAACATTCCTGTCTCTGATTTCAGCCTGCAATCATTCCGGTTTTGTGGAGGAAGGGAAAAACATTTTTGAGTTCATGAAACAAGACTATGGAATCGAACCAAATATGGAACATTATGCAAATATGGTGGATCTTCTAGGACGTGCAGGTCTCCTCGAAGAAGCTTACAGTTTTATAAAAGCAATGCCTATTGAAGCAGACAGTAGCATATGGCTCTGCCTCTTATCTGCTTCAAGAACTCATCATAATGTAGAACTTGGGATATTGTCTGCTGAGAAGTTGTTGAGAATGGAACCGGAAAGAGGCAGTACCTATGTTCAGCTAATCAATCTTTACATGGAAGCAGGATTGAAGAACGAAGCAGCAAAGCTGTTGGGTCTGATGAAGGAGAAAGGCTTGCATAAACAACCTGGTTGCAGTTGGATTGAAGTTAGCGATAGAACTAATGTTTTCTTTTCAGGAGGTTCATCTTCTCCAATGAAGGCTGAGATATTCAACGTATTGAATAGGTTAAAGAGTAATATGGTAGATGAGGACAAGGCAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

860

Amino Acids

95.39

Weight (kDa)

6.37

Isoelectric Point (pI)

38.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	132 - 180	7.4e-09	PPR repeat family
PPR	PF01535	135 - 164	8.3e-06	PPR repeat
PPR_2	PF13041	340 - 383	6.6e-06	PPR repeat family
PPR_2	PF13041	438 - 477	4.7e-08	PPR repeat family
PPR_1	PF12854	438 - 466	1e-07	PPR repeat
PPR	PF01535	440 - 468	1.3e-08	PPR repeat
PPR_2	PF13041	541 - 584	1.4e-08	PPR repeat family
PPR	PF01535	543 - 573	5.4e-07	PPR repeat
PPR_2	PF13041	642 - 688	4.6e-11	PPR repeat family
PPR	PF01535	644 - 673	4.1e-08	PPR repeat
E_motif	PF20431	759 - 821	5.3e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39620 AT2G40720
fragaria_vesca	FvH4_7g21891
malus_domestica	MD07G1193300.v1.1
prunus_persica	Prupe.2G231000_v2.0.a1
pyrus_communis	pycom07g18250
rosa_chinensis	RchiOBHm_Chr1g0366141
rosa_laevigata	RLG00000027363
rosa_multiflora	Rmu_co8484073.1_g000001 Rmu_sc0003987.1_g000001
rosa_roxburghii	Rroxscaffold_4G00290450 Rroxscaffold_4G00290460
rosa_rugosa	Rorug01G0327800 Rorug01G0327900
rosa_samantha	Rh1AG335900 Rh1BG297300 Rh1CG313300 Rh1DG329100
rosa_wichuraiana	Rw1G029800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2210
AasI	GACNNNNNNGTC	1 cut(s)	2181
Acc36I	ACCTGC	1 cut(s)	2171
AccI	GTMKAC	2 cut(s)	1223, 1795
AciI	CCGC	3 cut(s)	556, 744, 1875
AclWI	GGATC	7 cut(s)	275, 761, 874, 1265, 1956, 1969, 2172
AcsI	RAATTY	5 cut(s)	434, 595, 859, 1361, 1636
AcuI	CTGAAG	2 cut(s)	973, 1472
AfaI	GTAC	6 cut(s)	428, 714, 931, 1064, 1219, 2344
AfiI	CCNNNNNNNGG	1 cut(s)	2336
AhdI	GACNNNNNGTC	1 cut(s)	361
AjiI	CACGTC	2 cut(s)	892, 2177
AjnI	CCWGG	2 cut(s)	1631, 2443
Alw21I	GWGCWC	3 cut(s)	100, 835, 1616
Alw26I	GTCTC	4 cut(s)	369, 1198, 2052, 2189
AlwI	GGATC	7 cut(s)	275, 761, 874, 1265, 1956, 1969, 2172
AlwNI	CAGNNNCTG	1 cut(s)	983
Ama87I	CYCGRG	1 cut(s)	390
AoxI	GGCC	1 cut(s)	1483
ApeKI	GCWGC	6 cut(s)	1037, 1149, 1500, 1542, 1915, 2396
ApoI	RAATTY	5 cut(s)	434, 595, 859, 1361, 1636
AseI	ATTAAT	1 cut(s)	81
Asp700I	GAANNNNTTC	1 cut(s)	1901
AsuHPI	GGTGA	3 cut(s)	907, 983, 1829
AsuII	TTCGAA	2 cut(s)	439, 1883
AvaI	CYCGRG	1 cut(s)	390
BamHI	GGATCC	1 cut(s)	1961
BanII	GRGCYC	3 cut(s)	100, 835, 1331
BbsI	GAAGAC	2 cut(s)	979, 1282
Bbv12I	GWGCWC	3 cut(s)	100, 835, 1616
BbvI	GCAGC	6 cut(s)	1049, 1161, 1512, 1554, 1927, 2408
BccI	CCATC	5 cut(s)	146, 264, 416, 895, 1745
BceAI	ACGGC	1 cut(s)	326
BcgI	CGANNNNNNTGC	4 cut(s)	1746, 1780, 2004, 2038
BciT130I	CCWGG	2 cut(s)	1633, 2445
BciVI	GTATCC	2 cut(s)	1744, 1825
BclI	TGATCA	1 cut(s)	1929
BcoDI	GTCTC	4 cut(s)	369, 1198, 2052, 2189
BfaI	CTAG	4 cut(s)	765, 1520, 1605, 2171
BfmI	CTRYAG	1 cut(s)	1654
BfuAI	ACCTGC	1 cut(s)	2171
BfuI	GTATCC	2 cut(s)	1744, 1825
BisI	GCNGC	6 cut(s)	1038, 1150, 1501, 1543, 1916, 2397
BlsI	GCNGC	6 cut(s)	1039, 1151, 1502, 1544, 1917, 2398
Bme1390I	CCNGG	2 cut(s)	1633, 2445
BmeRI	GACNNNNNGTC	1 cut(s)	361
BmeT110I	CYCGRG	1 cut(s)	390
BmgBI	CACGTC	2 cut(s)	892, 2177
BmiI	GGNNCC	4 cut(s)	1330, 1940, 1963, 2328
BmrFI	CCNGG	2 cut(s)	1633, 2445
BmrI	ACTGGG	1 cut(s)	1524
BmsI	GCATC	6 cut(s)	83, 465, 490, 658, 1267, 1692
BmuI	ACTGGG	1 cut(s)	1524
BpiI	GAAGAC	2 cut(s)	979, 1282
BpmI	CTGGAG	1 cut(s)	849
Bpu14I	TTCGAA	2 cut(s)	439, 1883
BpuEI	CTTGAG	1 cut(s)	1034
Bsa29I	ATCGAT	2 cut(s)	77, 662
BsaI	GGTCTC	3 cut(s)	369, 1198, 2189
BsaJI	CCNNGG	1 cut(s)	1966
BsaWI	WCCGGW	2 cut(s)	2072, 2329
Bsc4I	CCNNNNNNNGG	1 cut(s)	2336
Bse1I	ACTGG	2 cut(s)	832, 1519
Bse3DI	GCAATG	3 cut(s)	288, 883, 2223
BseBI	CCWGG	2 cut(s)	1633, 2445
BseCI	ATCGAT	2 cut(s)	77, 662
BseDI	CCNNGG	1 cut(s)	1966
BseGI	GGATG	4 cut(s)	275, 400, 480, 1271
BseLI	CCNNNNNNNGG	1 cut(s)	2336
BseMI	GCAATG	3 cut(s)	288, 883, 2223
BseMII	CTCAG	7 cut(s)	241, 380, 1353, 1489, 1720, 2298, 2511
BseNI	ACTGG	2 cut(s)	832, 1519
BseRI	GAGGAG	1 cut(s)	2177
BseXI	GCAGC	6 cut(s)	1049, 1161, 1512, 1554, 1927, 2408
BsgI	GTGCAG	1 cut(s)	2199
Bsh1285I	CGRYCG	1 cut(s)	258
BshFI	GGCC	1 cut(s)	1485
BshVI	ATCGAT	2 cut(s)	77, 662
BsiEI	CGRYCG	1 cut(s)	258
BsiHKAI	GWGCWC	3 cut(s)	100, 835, 1616
BsiHKCI	CYCGRG	1 cut(s)	390
BsiSI	CCGG	3 cut(s)	71, 2073, 2330
BslFI	GGGAC	3 cut(s)	51, 918, 1403
BslI	CCNNNNNNNGG	1 cut(s)	2336
BsmAI	GTCTC	4 cut(s)	369, 1198, 2052, 2189
BsmFI	GGGAC	3 cut(s)	51, 918, 1403
BsmI	GAATGC	2 cut(s)	1030, 1821
BsnI	GGCC	1 cut(s)	1485
Bso31I	GGTCTC	3 cut(s)	369, 1198, 2189
BsoBI	CYCGRG	1 cut(s)	390
Bsp119I	TTCGAA	2 cut(s)	439, 1883
Bsp1286I	GDGCHC	4 cut(s)	100, 835, 1331, 1616
Bsp143I	GATC	9 cut(s)	280, 753, 879, 1270, 1335, 1555, 1929, 1961, 2164
Bsp19I	CCATGG	1 cut(s)	1966
BspACI	CCGC	3 cut(s)	556, 744, 1875
BspANI	GGCC	1 cut(s)	1485
BspCNI	CTCAG	7 cut(s)	240, 379, 1352, 1488, 1719, 2299, 2512
BspDI	ATCGAT	2 cut(s)	77, 662
BspHI	TCATGA	2 cut(s)	1089, 2109
BspLI	GGNNCC	4 cut(s)	1330, 1940, 1963, 2328
BspMI	ACCTGC	1 cut(s)	2171
BspPI	GGATC	7 cut(s)	275, 761, 874, 1265, 1956, 1969, 2172
BspT104I	TTCGAA	2 cut(s)	439, 1883
BspTNI	GGTCTC	3 cut(s)	369, 1198, 2189
BsrDI	GCAATG	3 cut(s)	288, 883, 2223
BsrI	ACTGG	2 cut(s)	832, 1519
BssECI	CCNNGG	1 cut(s)	1966
BssMI	GATC	9 cut(s)	280, 753, 879, 1270, 1335, 1555, 1929, 1961, 2164
BssT1I	CCWWGG	1 cut(s)	1966
Bst2UI	CCWGG	2 cut(s)	1633, 2445
Bst4CI	ACNGT	9 cut(s)	359, 403, 800, 942, 985, 1197, 1680, 2204, 2237
BstAPI	GCANNNNNTGC	1 cut(s)	1043
BstBI	TTCGAA	2 cut(s)	439, 1883
BstC8I	GCNNGC	6 cut(s)	208, 786, 1774, 1778, 2062, 2432
BstDSI	CCRYGG	1 cut(s)	1966
BstF5I	GGATG	4 cut(s)	275, 400, 480, 1271
BstKTI	GATC	9 cut(s)	283, 756, 882, 1273, 1338, 1558, 1932, 1964, 2167
BstMAI	GTCTC	4 cut(s)	369, 1198, 2052, 2189
BstMBI	GATC	9 cut(s)	280, 753, 879, 1270, 1335, 1555, 1929, 1961, 2164
BstMCI	CGRYCG	1 cut(s)	258
BstMWI	GCNNNNNNNGC	5 cut(s)	10, 212, 839, 1034, 1043
BstNI	CCWGG	2 cut(s)	1633, 2445
BstNSI	RCATGY	1 cut(s)	1458
BstSCI	CCNGG	2 cut(s)	1631, 2443
BstSFI	CTRYAG	1 cut(s)	1654
BstV1I	GCAGC	6 cut(s)	1049, 1161, 1512, 1554, 1927, 2408
BstV2I	GAAGAC	2 cut(s)	979, 1282
BstX2I	RGATCY	4 cut(s)	753, 879, 1961, 2164
BstYI	RGATCY	4 cut(s)	753, 879, 1961, 2164
Bsu15I	ATCGAT	2 cut(s)	77, 662
BsuI	GTATCC	2 cut(s)	1744, 1825
BsuRI	GGCC	1 cut(s)	1485
BsuTUI	ATCGAT	2 cut(s)	77, 662
BtgI	CCRYGG	1 cut(s)	1966
BtrI	CACGTC	2 cut(s)	892, 2177
BtsCI	GGATG	4 cut(s)	275, 400, 480, 1271
BtsIMutI	CAGTG	2 cut(s)	805, 825
BveI	ACCTGC	1 cut(s)	2171
Cac8I	GCNNGC	6 cut(s)	208, 786, 1774, 1778, 2062, 2432
CaiI	CAGNNNCTG	1 cut(s)	983
CciI	TCATGA	2 cut(s)	1089, 2109
ClaI	ATCGAT	2 cut(s)	77, 662
CsiI	ACCWGGT	1 cut(s)	2443
Csp6I	GTAC	6 cut(s)	427, 713, 930, 1063, 1218, 2343
CspCI	CAANNNNNGTGG	2 cut(s)	2142, 2177
CviQI	GTAC	6 cut(s)	427, 713, 930, 1063, 1218, 2343
DpnI	GATC	9 cut(s)	282, 755, 881, 1272, 1337, 1557, 1931, 1963, 2166
DpnII	GATC	9 cut(s)	280, 753, 879, 1270, 1335, 1555, 1929, 1961, 2164
DrdI	GACNNNNNNGTC	1 cut(s)	2181
DriI	GACNNNNNGTC	1 cut(s)	361
DseDI	GACNNNNNNGTC	1 cut(s)	2181
Eam1105I	GACNNNNNGTC	1 cut(s)	361
Ecl136II	GAGCTC	2 cut(s)	98, 833
Eco130I	CCWWGG	1 cut(s)	1966
Eco24I	GRGCYC	3 cut(s)	100, 835, 1331
Eco31I	GGTCTC	3 cut(s)	369, 1198, 2189
Eco32I	GATATC	1 cut(s)	1647
Eco53kI	GAGCTC	2 cut(s)	98, 833
Eco57I	CTGAAG	2 cut(s)	973, 1472
Eco88I	CYCGRG	1 cut(s)	390
EcoICRI	GAGCTC	2 cut(s)	98, 833
EcoRI	GAATTC	3 cut(s)	595, 859, 1636
EcoRII	CCWGG	2 cut(s)	1631, 2443
EcoRV	GATATC	1 cut(s)	1647
EcoT14I	CCWWGG	1 cut(s)	1966
EcoT38I	GRGCYC	3 cut(s)	100, 835, 1331
ErhI	CCWWGG	1 cut(s)	1966
FalI	AAGNNNNNCTT	2 cut(s)	1559, 1591
FaqI	GGGAC	3 cut(s)	51, 918, 1403
FauI	CCCGC	2 cut(s)	549, 1868
FauNDI	CATATG	1 cut(s)	2243
FbaI	TGATCA	1 cut(s)	1929
FblI	GTMKAC	2 cut(s)	1223, 1795
Fnu4HI	GCNGC	6 cut(s)	1038, 1150, 1501, 1543, 1916, 2397
FokI	GGATG	4 cut(s)	282, 407, 487, 1278
FriOI	GRGCYC	3 cut(s)	100, 835, 1331
Fsp4HI	GCNGC	6 cut(s)	1038, 1150, 1501, 1543, 1916, 2397
FspBI	CTAG	4 cut(s)	765, 1520, 1605, 2171
GluI	GCNGC	6 cut(s)	1038, 1150, 1501, 1543, 1916, 2397
GsuI	CTGGAG	1 cut(s)	849
HaeIII	GGCC	1 cut(s)	1485
HapII	CCGG	3 cut(s)	71, 2073, 2330
HindIII	AAGCTT	5 cut(s)	11, 204, 806, 1774, 2196
HpaII	CCGG	3 cut(s)	71, 2073, 2330
HphI	GGTGA	3 cut(s)	907, 983, 1829
Hpy166II	GTNNAC	4 cut(s)	25, 1186, 1224, 1796
Hpy8I	GTNNAC	4 cut(s)	25, 1186, 1224, 1796
Hpy99I	CGWCG	6 cut(s)	23, 36, 263, 359, 474, 893
HpyCH4III	ACNGT	9 cut(s)	359, 403, 800, 942, 985, 1197, 1680, 2204, 2237
HpyCH4IV	ACGT	6 cut(s)	21, 185, 891, 1220, 2176, 2532
HpyF10VI	GCNNNNNNNGC	5 cut(s)	10, 212, 839, 1034, 1043
HpySE526I	ACGT	6 cut(s)	21, 185, 891, 1220, 2176, 2532
Ksp22I	TGATCA	1 cut(s)	1929
Kzo9I	GATC	9 cut(s)	280, 753, 879, 1270, 1335, 1555, 1929, 1961, 2164
LmnI	GCTCC	3 cut(s)	830, 1334, 1550
Lsp1109I	GCAGC	6 cut(s)	1049, 1161, 1512, 1554, 1927, 2408
LweI	GCATC	6 cut(s)	83, 465, 490, 658, 1267, 1692
MabI	ACCWGGT	1 cut(s)	2443
MaeI	CTAG	4 cut(s)	765, 1520, 1605, 2171
MaeII	ACGT	6 cut(s)	21, 185, 891, 1220, 2176, 2532
MaeIII	GTNAC	3 cut(s)	397, 1444, 2035
MalI	GATC	9 cut(s)	282, 755, 881, 1272, 1337, 1557, 1931, 1963, 2166
MboI	GATC	9 cut(s)	280, 753, 879, 1270, 1335, 1555, 1929, 1961, 2164
MflI	RGATCY	4 cut(s)	753, 879, 1961, 2164
MhlI	GDGCHC	4 cut(s)	100, 835, 1331, 1616
MluCI	AATT	7 cut(s)	82, 102, 434, 595, 859, 1361, 1636
MlyI	GAGTC	3 cut(s)	379, 1809, 1999
MmeI	TCCRAC	2 cut(s)	452, 2435
MroXI	GAANNNNTTC	1 cut(s)	1901
MseI	TTAA	9 cut(s)	81, 201, 306, 447, 590, 1200, 1509, 1811, 2546
MslI	CAYNNNNRTG	2 cut(s)	1607, 2280
MspI	CCGG	3 cut(s)	71, 2073, 2330
MspR9I	CCNGG	2 cut(s)	1633, 2445
Mva1269I	GAATGC	2 cut(s)	1030, 1821
MvaI	CCWGG	2 cut(s)	1633, 2445
MwoI	GCNNNNNNNGC	5 cut(s)	10, 212, 839, 1034, 1043
NcoI	CCATGG	1 cut(s)	1966
NdeI	CATATG	1 cut(s)	2243
NdeII	GATC	9 cut(s)	280, 753, 879, 1270, 1335, 1555, 1929, 1961, 2164
NlaIV	GGNNCC	4 cut(s)	1330, 1940, 1963, 2328
NmeAIII	GCCGAG	2 cut(s)	191, 1797
NspI	RCATGY	1 cut(s)	1458
NspV	TTCGAA	2 cut(s)	439, 1883
PagI	TCATGA	2 cut(s)	1089, 2109
PcsI	WCGNNNNNNNCGW	2 cut(s)	218, 668
PctI	GAATGC	2 cut(s)	1030, 1821
PdmI	GAANNNNTTC	1 cut(s)	1901
PkrI	GCNGC	6 cut(s)	1039, 1151, 1502, 1544, 1917, 2398
PleI	GAGTC	3 cut(s)	378, 1809, 1998
PpsI	GAGTC	3 cut(s)	378, 1809, 1998
PshBI	ATTAAT	1 cut(s)	81
PsiI	TTATAA	1 cut(s)	2210
Psp124BI	GAGCTC	2 cut(s)	100, 835
Psp6I	CCWGG	2 cut(s)	1631, 2443
PspGI	CCWGG	2 cut(s)	1631, 2443
PspN4I	GGNNCC	4 cut(s)	1330, 1940, 1963, 2328
PstNI	CAGNNNCTG	1 cut(s)	983
PsuI	RGATCY	4 cut(s)	753, 879, 1961, 2164
RsaI	GTAC	6 cut(s)	428, 714, 931, 1064, 1219, 2344
RsaNI	GTAC	6 cut(s)	427, 713, 930, 1063, 1218, 2343
RseI	CAYNNNNRTG	2 cut(s)	1607, 2280
SacI	GAGCTC	2 cut(s)	100, 835
SaqAI	TTAA	9 cut(s)	81, 201, 306, 447, 590, 1200, 1509, 1811, 2546
SatI	GCNGC	6 cut(s)	1038, 1150, 1501, 1543, 1916, 2397
Sau3AI	GATC	9 cut(s)	280, 753, 879, 1270, 1335, 1555, 1929, 1961, 2164
SchI	GAGTC	3 cut(s)	379, 1809, 1999
ScrFI	CCNGG	2 cut(s)	1633, 2445
SduI	GDGCHC	4 cut(s)	100, 835, 1331, 1616
SexAI	ACCWGGT	1 cut(s)	2443
SfaNI	GCATC	6 cut(s)	83, 465, 490, 658, 1267, 1692
SfcI	CTRYAG	1 cut(s)	1654
SfuI	TTCGAA	2 cut(s)	439, 1883
SmiMI	CAYNNNNRTG	2 cut(s)	1607, 2280
SmlI	CTYRAG	1 cut(s)	1013
SmoI	CTYRAG	1 cut(s)	1013
Sse9I	AATT	7 cut(s)	82, 102, 434, 595, 859, 1361, 1636
SsiI	CCGC	3 cut(s)	556, 744, 1875
SspMI	CTAG	4 cut(s)	765, 1520, 1605, 2171
SstI	GAGCTC	2 cut(s)	100, 835
StyD4I	CCNGG	2 cut(s)	1631, 2443
StyI	CCWWGG	1 cut(s)	1966
TaaI	ACNGT	9 cut(s)	359, 403, 800, 942, 985, 1197, 1680, 2204, 2237
TaiI	ACGT	6 cut(s)	24, 188, 894, 1223, 2179, 2535
TaqII	GACCGA	2 cut(s)	244, 1222
TasI	AATT	7 cut(s)	82, 102, 434, 595, 859, 1361, 1636
TatI	WGTACW	2 cut(s)	712, 929
Tru1I	TTAA	9 cut(s)	81, 201, 306, 447, 590, 1200, 1509, 1811, 2546
Tru9I	TTAA	9 cut(s)	81, 201, 306, 447, 590, 1200, 1509, 1811, 2546
TscAI	CASTG	2 cut(s)	805, 832
TseI	GCWGC	6 cut(s)	1037, 1149, 1500, 1542, 1915, 2396
TspGWI	ACGGA	2 cut(s)	166, 1631
TspRI	CASTG	2 cut(s)	805, 832
VspI	ATTAAT	1 cut(s)	81
XapI	RAATTY	5 cut(s)	434, 595, 859, 1361, 1636
XceI	RCATGY	1 cut(s)	1458
XmiI	GTMKAC	2 cut(s)	1223, 1795
XmnI	GAANNNNTTC	1 cut(s)	1901
XspI	CTAG	4 cut(s)	765, 1520, 1605, 2171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.