Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010808

Physical Location & Seq

Genomic Coordinates Forward (+)

380350 .. 384582

Gene Structure 4233 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G02130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3456 bp

ATGACTTCTTTGCCTTCTTCAGTGATCAAATGGCGTTTTTTCCGCAGACAGATGCCTTCAGACGTTGTCTTCTCGCTCTGCTTACTCTGTTTCGCCTCCTGTCTCGCCGGAAAAATCACTGTTTTAGCTGATTCGGACAAATCCGTGTTGCTTCGGTTTAAGAAAACGGTATCGGACCCTGGTTCGATTCTAGCTAGCTGGGTCGAAGAGAGTGAAGATTACTGCTCCTGGTTTGGTGTATCTTGCGATTCGAGCTCTCGAGTCATGGCTCTTAACATTAGTGGCTCTGGAAGTTCTGAAATTAGTCGAAATCGTTTCACTTGTGGTGATATTGGTAAGTTTCCGTTGTATGGGTTTGGTGTTCGGAGGGATTGTACCGGAAATCATGGAGCTTTGGCGGGGAATTTGCCTTCTGTAATCATGAGTCTCACAGGACTTAGGGTTTTGTCTCTGCCTTTTAATTCGTTTAGTGGAGAGATTCCTGTAGGAATCTGGGGAATGGAGAAGCTTGAAGTTCTTGATCTGGAAGGGAATTTGATGACGGGGTCATTGCCGGATCAGTTTACTGGGTTACGGAATTTGCGGGTTATGAATTTGGGGTTTAACAGAGTTTCAGGTGAAATCCCTAATTCGCTGCAGAATCTGACAAAGTTGGAGATTTTGAATTTGGGTGGTAATAAGTTGAATGGAACTGTTCCTGGTTTTGTTGGGAGATTCAGAGTGTTGCATTTGCCGTTAAACTGGCTTCAAGGCTCTTTGCCTAAAGATATTGGGGATAGCTGTGGAAAGCTTGAGCATTTAGATTTGTCTGGTAATTTCTTGACTGGGAGGATTCCAGAGAGTTTGGGGAAATGTGCTGGTTTAAGGTCGTTGTTGTTGTATATGAATACGTTGGAGGAGACTATCCCTTTAGAATTTGGGAGTCTTCAGAAGCTTGAGGTTTTGGATGTTTCTAGGAACACTCTTAGTGGTCCATTACCTGTTGAACTTGGAAATTGCTCTTCGTTGTCTGTTCTCGTTCTATCAAATCTGTACAATGTGTATGAAGACATTAATAGTGTAAGAGGGGAAGCTGATCTTCCTCCAGGCGCTGATTTAACCTCGATGACCGAGGATTTCAATTTCTATCAAGGAGGAATCCCGGAGGAAATCACTAGGCTTCCGAAACTAAAGATACTTTGGGTGCCCAGAGCTACGTTAGAAGGTAGATTTCCAGGAGATTGGGGTTCATGTCAAAACTTGGAGATGGTTAATTTGGGTCAGAACTTCTTTAAAGGCGAAATTCCTGTCGGTCTTAGTAAATGCAAGAACCTTCGTCTTCTTGATTTGAGCTCGAATAGGCTTACTGGGGAGCTTCTCAAAGAGATTTCGGTCCCATGCATGAGTGTTTTTGATGTTGGTGGAAACAGCTTATCGGGTGTAATCCCTGATTTTCTCAACAATACCACAAGCCATTGTCCTCCTGTTGTTTACTTTGACAGGTTTTCTATTGAATCTTACAGCGACCCGTCGTCTGTTTATCTCTCCTTCTTTACCGAGAAGGCTCAAGTTGGAACTTCCCTGATAGATCTTGGAAGTGATGGAGGTCCGGCCGTGTTTCATAATTTTGCAGACAACAACTTCACTGGTACTCTCAAGTCTATACCACTTGCACAGGAGCGGTTGGGAAAGCGAGTCTCTTACATATTTTCTGCTGGAGGGAATCGGTTGTACGGGCAATTTCCGGGAAATCTGTTTGATAACTGCGACGAACTCAAAGCTGTTTATGTCAATGTAAGCTTCAACAAGCTCTCAGGTCGGATTCCTCAGGGACTAAACAACATGTGCACTTCTCTTAAGATTCTTGATGCCTCGGTGAATCAGATCTTCGGGCCAATCCCAACAAGTCTCGGGGATCTAGCTTCACTTGTTGCTCTTAATCTGAGCTGGAATCAGTTGCAAGGTCAGATACCGGGTAGCCTCGGGAAGAAGATGGCAGCTTTGACATATCTTTCGATTGCGAATAACAACCTCACGGGGCAAATTCCTCAGAGCTTTGGTCAGTTACATTCCTTGGATGTTCTTGATCTCTCTTCAAATCATCTATCTGGCGGTATTCCTCATGATTTCGTAAACTTGAAGAATCTCACTGTCCTGCTTCTCAACAATAACAACCTCTCTGGCCCAATCCCGTCGGGTTTTGCGACATTTGCTGTTTTCAATGTTTCCTCCAACAATCTGTCTGGTCCAGTTCCTTCAACCAATGGACTGACGAAATGCAGCACTGTTAGTGGAAACCCCTATCTTCGACCTTGCCATGTGTTTTCTCTGACAACACCGTCTTCGGATTCCCGAGACTCCACGGGTGATTCTATCACGCAGGATTACGCATCTTCGCCTGTTGAAAACGCTCCATCTCAGTCGCCAGGAAAGGGTGGATTCAACTCGCTAGAGATCGCCTCAATCGCATCAGCTTCAGCGATTGTCTCGGTACTAATTGCTCTTGTAATTCTCTTCTTCTACACAAGGAAATGGCATCCGAAATCGAAGATCATGGCCACTACAAAACGAGAAGTCACTATGTTCATGGATATCGGAGTTCCAATAACCTTTGACAACGTGGTTAGAGCCACAGGAAACTTCAACGCAAGCAATCTGATTGGAAATGGTGGATTTGGAGCGACCTACAAAGCAGAAATCTCTCAAGATGTGGTTGTCGCAATCAAACGCCTCTCGATCGGACGGTTTCAGGGAGTCCAACAGTTCCACGCAGAAATCAAAACTCTTGGTAGACTTCGACACCCGAACCTCGTGACTCTCATCGGTTACCACGCTAGCGAAACTGAGATGTTCTTGGTGTACAACTATCTCCCAGGAGGCAACCTCGAGAAATTCATCCAAGAAAGATCCACAAGAGATTGGAGAGTTCTTCATAAGATCGCTCTGGACATAGCTCGAGCACTCGCTTACCTCCACGACCAATGCGTCCCACGGGTGCTTCACCGAGATGTTAAACCGAGTAACATCCTCCTAGATGATGACTGCAATGCGTATTTATCAGATTTCGGGTTAGCGAGATTGCTTGGGACATCGGAAACGCACGCAACAACTGGTGTGGCGGGTACGTTTGGGTATGTAGCTCCCGAGTACGCAATGACATGCAGGGTATCAGACAAAGCAGATGTATACAGCTACGGAGTGGTGCTTCTAGAGCTGCTTTCGGACAAGAAAGCACTTGATCCGTCATTTGTGTCGTATGGTAATGGTTTCAACATAGTGCAATGGGCTTGTATGTTGTTGAGACAAGGAAGGGCAAAGGAGTTTTTCACAGCGGGATTGTGGGACGCAGGTCCGCATGATGATCTAGTAGAGGTTCTGCATTTAGCGGTTGTTTGTACGGTGGATTCTCTGTCGACGAGGCCGACGATGAAGCAAGTTGTAAGACGGTTGAAGCAGCTACAACCTCCGTCGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0001101 GO:0003002 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006950 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009555 GO:0009628 GO:0009698 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009808 GO:0009846 GO:0009856 GO:0009880 GO:0009888 GO:0009908 GO:0009942 GO:0009945 GO:0009956 GO:0009987 GO:0010035 GO:0010073 GO:0010152 GO:0010154 GO:0016020 GO:0016043 GO:0019748 GO:0021700 GO:0022414 GO:0022607 GO:0032501 GO:0032502 GO:0042221 GO:0043933 GO:0044085 GO:0044237 GO:0044464 GO:0044706 GO:0048229 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048508 GO:0048608 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051259 GO:0051260 GO:0051704 GO:0061458 GO:0065003 GO:0071704 GO:0071840 GO:0071944 GO:0090567 GO:0099402 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

1151

Amino Acids

125.23

Weight (kDa)

6.47

Isoelectric Point (pI)

37.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	44 - 83	1.8e-12	Leucine rich repeat N-terminal domain
LRR_14	PF23598	140 - 266	1.4e-07	Leucine-rich repeat region
LRR_8	PF13855	185 - 228	1.3e-06	Leucine rich repeat
LRR_14	PF23598	657 - 725	9.5e-06	Leucine-rich repeat region
LRR_8	PF13855	661 - 719	2.6e-10	Leucine rich repeat
Pkinase	PF00069	876 - 1073	4e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	877 - 1143	1.5e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02130 AT3G02130
fragaria_vesca	FvH4_6g46830
malus_domestica	MD09G1067100.v1.1 MD17G1060000.v1.1 MD17G1060100.v1.1
prunus_persica	Prupe.3G254600_v2.0.a1
pyrus_communis	pycom111g05640 pycom17g05970 pycom17g05980
rosa_chinensis	RchiOBHm_Chr2g0165821
rosa_laevigata	RLG00000021558
rosa_multiflora	Rmu_sc0003227.1_g000004
rosa_roxburghii	Rroxscaffold_2G00085480
rosa_rugosa	Rorug02G0518000
rosa_samantha	Rh2AG583700 Rh2BG595700 Rh2CG566600 Rh2DG605500
rosa_wichuraiana	Rw2G048670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	2317, 2963
Acc36I	ACCTGC	1 cut(s)	3317
AccB1I	GGYRCC	1 cut(s)	1183
AccBSI	CCGCTC	1 cut(s)	1660
AccI	GTMKAC	3 cut(s)	2770, 3165, 3392
AciI	CCGC	9 cut(s)	43, 398, 583, 1660, 2091, 3098, 3311, 3332, 3365
AclWI	GGATC	4 cut(s)	564, 1902, 2880, 3212
AcoI	YGGCCR	2 cut(s)	1590, 2535
AcsI	RAATTY	9 cut(s)	403, 532, 577, 592, 664, 914, 1281, 2022, 2870
AcuI	CTGAAG	3 cut(s)	42, 911, 2439
AfaI	GTAC	9 cut(s)	376, 1034, 1630, 1712, 2472, 2840, 3103, 3128, 3376
AfiI	CCNNNNNNNGG	2 cut(s)	350, 2411
AflII	CTTAAG	1 cut(s)	1835
AflIII	ACRYGT	1 cut(s)	1821
AhdI	GACNNNNNGTC	1 cut(s)	1510
AjnI	CCWGG	7 cut(s)	178, 227, 697, 1084, 1213, 2404, 2851
Alw21I	GWGCWC	4 cut(s)	257, 1334, 1829, 2941
Alw26I	GTCTC	9 cut(s)	107, 431, 453, 893, 1681, 1892, 2328, 2470, 3274
Alw44I	GTGCAC	1 cut(s)	1825
AlwI	GGATC	4 cut(s)	564, 1902, 2880, 3212
AlwNI	CAGNNNCTG	2 cut(s)	643, 1091
Ama87I	CYCGRG	7 cut(s)	258, 1889, 1961, 2331, 2864, 2934, 3122
AoxI	GGCC	5 cut(s)	1590, 1871, 2161, 2535, 3398
ApaLI	GTGCAC	1 cut(s)	1825
ApeKI	GCWGC	5 cut(s)	634, 1976, 2259, 3193, 3433
ApoI	RAATTY	9 cut(s)	403, 532, 577, 592, 664, 914, 1281, 2022, 2870
ArsI	GACNNNNNNTTYG	4 cut(s)	1272, 1304, 1975, 2007
AseI	ATTAAT	1 cut(s)	1053
AspLEI	GCGC	1 cut(s)	1091
AspS9I	GGNCC	8 cut(s)	175, 971, 1372, 1586, 1871, 2162, 2225, 3329
AsuC2I	CCSGG	3 cut(s)	1142, 1725, 1953
AsuHPI	GGTGA	5 cut(s)	338, 629, 1867, 2357, 2972
AsuNHI	GCTAGC	2 cut(s)	194, 2813
AvaI	CYCGRG	7 cut(s)	258, 1889, 1961, 2331, 2864, 2934, 3122
AvaII	GGWCC	6 cut(s)	175, 971, 1372, 1586, 2225, 3329
AxyI	CCTNAGG	1 cut(s)	1806
BaeGI	GKGCMC	2 cut(s)	1188, 1829
BalI	TGGCCA	1 cut(s)	2537
BanI	GGYRCC	1 cut(s)	1183
BanII	GRGCYC	2 cut(s)	257, 1334
BauI	CACGAG	1 cut(s)	2789
BbsI	GAAGAC	5 cut(s)	61, 917, 1053, 1310, 2313
Bbv12I	GWGCWC	4 cut(s)	257, 1334, 1829, 2941
BbvI	GCAGC	5 cut(s)	621, 1988, 2271, 3180, 3445
BccI	CCATC	4 cut(s)	1240, 1574, 1966, 2401
BceAI	ACGGC	2 cut(s)	718, 1577
BciT130I	CCWGG	7 cut(s)	180, 229, 699, 1086, 1215, 2406, 2853
BclI	TGATCA	1 cut(s)	24
BcnI	CCSGG	3 cut(s)	1142, 1725, 1953
BcoDI	GTCTC	9 cut(s)	107, 431, 453, 893, 1681, 1892, 2328, 2470, 3274
BfmI	CTRYAG	2 cut(s)	483, 635
BfoI	RGCGCY	1 cut(s)	1092
BfrI	CTTAAG	1 cut(s)	1835
BfuAI	ACCTGC	1 cut(s)	3317
BglII	AGATCT	2 cut(s)	1567, 1863
BisI	GCNGC	5 cut(s)	635, 1977, 2260, 3194, 3434
BlsI	GCNGC	5 cut(s)	636, 1978, 2261, 3195, 3435
Bme18I	GGWCC	6 cut(s)	175, 971, 1372, 1586, 2225, 3329
BmeRI	GACNNNNNGTC	1 cut(s)	1510
BmeT110I	CYCGRG	7 cut(s)	258, 1889, 1961, 2331, 2864, 2934, 3122
BmgT120I	GGNCC	8 cut(s)	175, 971, 1372, 1586, 1871, 2162, 2225, 3329
BmiI	GGNNCC	3 cut(s)	177, 1185, 1374
BmrI	ACTGGG	3 cut(s)	576, 834, 1356
BmsI	GCATC	5 cut(s)	42, 1837, 2378, 2456, 2524
BmtI	GCTAGC	2 cut(s)	198, 2817
BmuI	ACTGGG	3 cut(s)	576, 834, 1356
BoxI	GACNNNNGTC	1 cut(s)	3327
BpiI	GAAGAC	5 cut(s)	61, 917, 1053, 1310, 2313
BplI	GAGNNNNNCTC	4 cut(s)	2423, 2455, 2847, 2879
BpmI	CTGGAG	2 cut(s)	1068, 1716
BpuEI	CTTGAG	5 cut(s)	812, 956, 1530, 1619, 2667
BpuMI	CCSGG	3 cut(s)	1142, 1725, 1953
BsaJI	CCNNGG	8 cut(s)	178, 1110, 1851, 1960, 2052, 2340, 2851, 2969
BsaWI	WCCGGW	1 cut(s)	377
BsaXI	ACNNNNNCTCC	2 cut(s)	358, 388
Bsc4I	CCNNNNNNNGG	2 cut(s)	350, 2411
Bse1I	ACTGG	7 cut(s)	571, 746, 829, 1351, 1630, 2228, 3094
Bse21I	CCTNAGG	1 cut(s)	1806
Bse3DI	GCAATG	4 cut(s)	548, 3031, 3138, 3266
BseBI	CCWGG	7 cut(s)	180, 229, 699, 1086, 1215, 2406, 2853
BseDI	CCNNGG	8 cut(s)	178, 1110, 1851, 1960, 2052, 2340, 2851, 2969
BseGI	GGATG	5 cut(s)	952, 2062, 2515, 2874, 3003
BseLI	CCNNNNNNNGG	2 cut(s)	350, 2411
BseMI	GCAATG	4 cut(s)	548, 3031, 3138, 3266
BseMII	CTCAG	6 cut(s)	1806, 1820, 1913, 2042, 2411, 2814
BseNI	ACTGG	7 cut(s)	571, 746, 829, 1351, 1630, 2228, 3094
BseRI	GAGGAG	1 cut(s)	911
BseSI	GKGCMC	2 cut(s)	1188, 1829
BseX3I	CGGCCG	1 cut(s)	1590
BseXI	GCAGC	5 cut(s)	621, 1988, 2271, 3180, 3445
BseYI	CCCAGC	1 cut(s)	198
Bsh1285I	CGRYCG	2 cut(s)	1593, 2718
BshFI	GGCC	5 cut(s)	1592, 1873, 2163, 2537, 3400
BshNI	GGYRCC	1 cut(s)	1183
BsiEI	CGRYCG	2 cut(s)	1593, 2718
BsiHKAI	GWGCWC	4 cut(s)	257, 1334, 1829, 2941
BsiHKCI	CYCGRG	7 cut(s)	258, 1889, 1961, 2331, 2864, 2934, 3122
BsiSI	CCGG	7 cut(s)	108, 378, 554, 1142, 1589, 1724, 1952
BslFI	GGGAC	5 cut(s)	1358, 1824, 2951, 3079, 3335
BslI	CCNNNNNNNGG	2 cut(s)	350, 2411
BsmAI	GTCTC	9 cut(s)	107, 431, 453, 893, 1681, 1892, 2328, 2470, 3274
BsmFI	GGGAC	5 cut(s)	1358, 1824, 2951, 3079, 3335
BsnI	GGCC	5 cut(s)	1592, 1873, 2163, 2537, 3400
BsoBI	CYCGRG	7 cut(s)	258, 1889, 1961, 2331, 2864, 2934, 3122
Bsp1286I	GDGCHC	5 cut(s)	257, 1188, 1334, 1829, 2941
Bsp1407I	TGTACA	2 cut(s)	1032, 2838
BspACI	CCGC	9 cut(s)	43, 398, 583, 1660, 2091, 3098, 3311, 3332, 3365
BspANI	GGCC	5 cut(s)	1592, 1873, 2163, 2537, 3400
BspCNI	CTCAG	6 cut(s)	1805, 1819, 1914, 2041, 2410, 2815
BspHI	TCATGA	2 cut(s)	420, 2101
BspLI	GGNNCC	3 cut(s)	177, 1185, 1374
BspMAI	CTGCAG	1 cut(s)	639
BspMI	ACCTGC	1 cut(s)	3317
BspOI	GCTAGC	2 cut(s)	198, 2817
BspPI	GGATC	4 cut(s)	564, 1902, 2880, 3212
BspQI	GCTCTTC	1 cut(s)	1006
BspT107I	GGYRCC	1 cut(s)	1183
BspTI	CTTAAG	1 cut(s)	1835
BsrBI	CCGCTC	1 cut(s)	1660
BsrDI	GCAATG	4 cut(s)	548, 3031, 3138, 3266
BsrGI	TGTACA	2 cut(s)	1032, 2838
BsrI	ACTGG	7 cut(s)	571, 746, 829, 1351, 1630, 2228, 3094
BssECI	CCNNGG	8 cut(s)	178, 1110, 1851, 1960, 2052, 2340, 2851, 2969
BssNAI	GTATAC	1 cut(s)	3166
BssSI	CACGAG	1 cut(s)	2789
BssT1I	CCWWGG	1 cut(s)	2052
Bst1107I	GTATAC	1 cut(s)	3166
Bst2BI	CACGAG	1 cut(s)	2789
Bst2UI	CCWGG	7 cut(s)	180, 229, 699, 1086, 1215, 2406, 2853
Bst6I	CTCTTC	4 cut(s)	201, 1006, 2077, 2498
BstAFI	CTTAAG	1 cut(s)	1835
BstAUI	TGTACA	2 cut(s)	1032, 2838
BstC8I	GCNNGC	4 cut(s)	196, 2629, 2815, 3081
BstDEI	CTNAG	9 cut(s)	437, 965, 1295, 1792, 1806, 1922, 2028, 2397, 2823
BstDSI	CCRYGG	2 cut(s)	2340, 2969
BstEII	GGTNACC	1 cut(s)	2804
BstF5I	GGATG	5 cut(s)	952, 2062, 2515, 2874, 3003
BstH2I	RGCGCY	1 cut(s)	1092
BstHHI	GCGC	1 cut(s)	1091
BstMAI	GTCTC	9 cut(s)	107, 431, 453, 893, 1681, 1892, 2328, 2470, 3274
BstMCI	CGRYCG	2 cut(s)	1593, 2718
BstMWI	GCNNNNNNNGC	4 cut(s)	252, 2189, 2444, 3190
BstNI	CCWGG	7 cut(s)	180, 229, 699, 1086, 1215, 2406, 2853
BstNSI	RCATGY	2 cut(s)	1825, 3141
BstPAI	GACNNNNGTC	1 cut(s)	3327
BstPI	GGTNACC	1 cut(s)	2804
BstSFI	CTRYAG	2 cut(s)	483, 635
BstSLI	GKGCMC	2 cut(s)	1188, 1829
BstV1I	GCAGC	5 cut(s)	621, 1988, 2271, 3180, 3445
BstV2I	GAAGAC	5 cut(s)	61, 917, 1053, 1310, 2313
BstX2I	RGATCY	4 cut(s)	1567, 1863, 1894, 2885
BstXI	CCANNNNNNTGG	1 cut(s)	1221
BstYI	RGATCY	4 cut(s)	1567, 1863, 1894, 2885
BstZ17I	GTATAC	1 cut(s)	3166
BstZI	CGGCCG	1 cut(s)	1590
Bsu36I	CCTNAGG	1 cut(s)	1806
BsuRI	GGCC	5 cut(s)	1592, 1873, 2163, 2537, 3400
BtgI	CCRYGG	2 cut(s)	2340, 2969
BtsCI	GGATG	5 cut(s)	952, 2062, 2515, 2874, 3003
BtsIMutI	CAGTG	5 cut(s)	27, 117, 1623, 2127, 2262
BveI	ACCTGC	1 cut(s)	3317
Cac8I	GCNNGC	4 cut(s)	196, 2629, 2815, 3081
CaiI	CAGNNNCTG	2 cut(s)	643, 1091
CciI	TCATGA	2 cut(s)	420, 2101
CfoI	GCGC	1 cut(s)	1091
Cfr13I	GGNCC	8 cut(s)	175, 971, 1372, 1586, 1871, 2162, 2225, 3329
CseI	GACGC	2 cut(s)	2953, 3332
Csp6I	GTAC	9 cut(s)	375, 1033, 1629, 1711, 2471, 2839, 3102, 3127, 3375
CspCI	CAANNNNNGTGG	2 cut(s)	3075, 3110
CviQI	GTAC	9 cut(s)	375, 1033, 1629, 1711, 2471, 2839, 3102, 3127, 3375
DdeI	CTNAG	9 cut(s)	437, 965, 1295, 1792, 1806, 1922, 2028, 2397, 2823
DraI	TTTAAA	1 cut(s)	1273
DrdI	GACNNNNNNGTC	2 cut(s)	2317, 2963
DriI	GACNNNNNGTC	1 cut(s)	1510
DseDI	GACNNNNNNGTC	2 cut(s)	2317, 2963
EaeI	YGGCCR	2 cut(s)	1590, 2535
EagI	CGGCCG	1 cut(s)	1590
Eam1104I	CTCTTC	4 cut(s)	201, 1006, 2077, 2498
Eam1105I	GACNNNNNGTC	1 cut(s)	1510
EarI	CTCTTC	4 cut(s)	201, 1006, 2077, 2498
Ecl136II	GAGCTC	2 cut(s)	255, 1332
EclXI	CGGCCG	1 cut(s)	1590
Eco130I	CCWWGG	1 cut(s)	2052
Eco24I	GRGCYC	2 cut(s)	257, 1334
Eco32I	GATATC	1 cut(s)	2572
Eco47I	GGWCC	6 cut(s)	175, 971, 1372, 1586, 2225, 3329
Eco52I	CGGCCG	1 cut(s)	1590
Eco53kI	GAGCTC	2 cut(s)	255, 1332
Eco57I	CTGAAG	3 cut(s)	42, 911, 2439
Eco81I	CCTNAGG	1 cut(s)	1806
Eco88I	CYCGRG	7 cut(s)	258, 1889, 1961, 2331, 2864, 2934, 3122
Eco91I	GGTNACC	1 cut(s)	2804
EcoICRI	GAGCTC	2 cut(s)	255, 1332
EcoO65I	GGTNACC	1 cut(s)	2804
EcoRII	CCWGG	7 cut(s)	178, 227, 697, 1084, 1213, 2404, 2851
EcoRV	GATATC	1 cut(s)	2572
EcoT14I	CCWWGG	1 cut(s)	2052
EcoT22I	ATGCAT	1 cut(s)	1382
EcoT38I	GRGCYC	2 cut(s)	257, 1334
ErhI	CCWWGG	1 cut(s)	2052
FalI	AAGNNNNNCTT	2 cut(s)	1062, 1094
FaqI	GGGAC	5 cut(s)	1358, 1824, 2951, 3079, 3335
FauI	CCCGC	4 cut(s)	391, 576, 3091, 3304
FbaI	TGATCA	1 cut(s)	24
FblI	GTMKAC	3 cut(s)	2770, 3165, 3392
Fnu4HI	GCNGC	5 cut(s)	635, 1977, 2260, 3194, 3434
FokI	GGATG	5 cut(s)	959, 2069, 2502, 2861, 2990
FriOI	GRGCYC	2 cut(s)	257, 1334
Fsp4HI	GCNGC	5 cut(s)	635, 1977, 2260, 3194, 3434
GlaI	GCGC	1 cut(s)	1090
GluI	GCNGC	5 cut(s)	635, 1977, 2260, 3194, 3434
GsaI	CCCAGC	1 cut(s)	202
GsuI	CTGGAG	2 cut(s)	1068, 1716
HaeII	RGCGCY	1 cut(s)	1092
HaeIII	GGCC	5 cut(s)	1592, 1873, 2163, 2537, 3400
HapII	CCGG	7 cut(s)	108, 378, 554, 1142, 1589, 1724, 1952
HgaI	GACGC	2 cut(s)	2953, 3332
HhaI	GCGC	1 cut(s)	1091
Hin6I	GCGC	1 cut(s)	1089
HinP1I	GCGC	1 cut(s)	1089
HincII	GTYRAC	1 cut(s)	3393
HindII	GTYRAC	1 cut(s)	3393
HindIII	AAGCTT	4 cut(s)	506, 788, 932, 1777
HpaII	CCGG	7 cut(s)	108, 378, 554, 1142, 1589, 1724, 1952
HphI	GGTGA	5 cut(s)	338, 629, 1867, 2357, 2972
Hpy166II	GTNNAC	8 cut(s)	564, 1471, 1827, 2113, 2771, 2839, 3166, 3393
Hpy8I	GTNNAC	8 cut(s)	564, 1471, 1827, 2113, 2771, 2839, 3166, 3393
Hpy99I	CGWCG	6 cut(s)	1513, 1751, 2176, 3397, 3406, 3451
HpyCH4IV	ACGT	5 cut(s)	63, 890, 1196, 2598, 3104
HpyF10VI	GCNNNNNNNGC	4 cut(s)	252, 2189, 2444, 3190
HpyF3I	CTNAG	9 cut(s)	437, 965, 1295, 1792, 1806, 1922, 2028, 2397, 2823
HpySE526I	ACGT	5 cut(s)	63, 890, 1196, 2598, 3104
HspAI	GCGC	1 cut(s)	1089
Ksp22I	TGATCA	1 cut(s)	24
LguI	GCTCTTC	1 cut(s)	1006
LmnI	GCTCC	7 cut(s)	230, 389, 1351, 1657, 2395, 2657, 3124
Lsp1109I	GCAGC	5 cut(s)	621, 1988, 2271, 3180, 3445
LweI	GCATC	5 cut(s)	42, 1837, 2378, 2456, 2524
MaeII	ACGT	5 cut(s)	63, 890, 1196, 2598, 3104
MaeIII	GTNAC	6 cut(s)	570, 2043, 2554, 2791, 2804, 2999
MbiI	CCGCTC	1 cut(s)	1660
MflI	RGATCY	4 cut(s)	1567, 1863, 1894, 2885
MhlI	GDGCHC	5 cut(s)	257, 1188, 1334, 1829, 2941
MlsI	TGGCCA	1 cut(s)	2537
MluNI	TGGCCA	1 cut(s)	2537
MlyI	GAGTC	7 cut(s)	270, 433, 931, 1683, 2330, 2742, 2788
MmeI	TCCRAC	6 cut(s)	633, 873, 1531, 1778, 2235, 2761
Mox20I	TGGCCA	1 cut(s)	2537
Mph1103I	ATGCAT	1 cut(s)	1382
MscI	TGGCCA	1 cut(s)	2537
MslI	CAYNNNNRTG	1 cut(s)	2985
Msp20I	TGGCCA	1 cut(s)	2537
MspA1I	CMGCKG	1 cut(s)	3311
MspCI	CTTAAG	1 cut(s)	1835
MspI	CCGG	7 cut(s)	108, 378, 554, 1142, 1589, 1724, 1952
MvaI	CCWGG	7 cut(s)	180, 229, 699, 1086, 1215, 2406, 2853
MwoI	GCNNNNNNNGC	4 cut(s)	252, 2189, 2444, 3190
NciI	CCSGG	3 cut(s)	1142, 1725, 1953
NheI	GCTAGC	2 cut(s)	194, 2813
NlaIV	GGNNCC	3 cut(s)	177, 1185, 1374
NmuCI	GTSAC	2 cut(s)	2554, 2791
NsiI	ATGCAT	1 cut(s)	1382
NspI	RCATGY	2 cut(s)	1825, 3141
PaeR7I	CTCGAG	3 cut(s)	258, 2864, 2934
PagI	TCATGA	2 cut(s)	420, 2101
PciI	ACATGT	1 cut(s)	1821
PciSI	GCTCTTC	1 cut(s)	1006
PcsI	WCGNNNNNNNCGW	4 cut(s)	2180, 2961, 3398, 3401
PflFI	GACNNNGTC	2 cut(s)	65, 544
PfoI	TCCNGGA	3 cut(s)	1140, 1213, 1723
PkrI	GCNGC	5 cut(s)	636, 1978, 2261, 3195, 3435
Ple19I	CGATCG	1 cut(s)	2718
PleI	GAGTC	7 cut(s)	269, 432, 930, 1682, 2330, 2741, 2788
PpsI	GAGTC	7 cut(s)	269, 432, 930, 1682, 2330, 2741, 2788
PscI	ACATGT	1 cut(s)	1821
PshAI	GACNNNNGTC	1 cut(s)	3327
PshBI	ATTAAT	1 cut(s)	1053
Psp124BI	GAGCTC	2 cut(s)	257, 1334
Psp6I	CCWGG	7 cut(s)	178, 227, 697, 1084, 1213, 2404, 2851
PspEI	GGTNACC	1 cut(s)	2804
PspFI	CCCAGC	1 cut(s)	198
PspGI	CCWGG	7 cut(s)	178, 227, 697, 1084, 1213, 2404, 2851
PspN4I	GGNNCC	3 cut(s)	177, 1185, 1374
PspPI	GGNCC	8 cut(s)	175, 971, 1372, 1586, 1871, 2162, 2225, 3329
PspXI	VCTCGAGB	1 cut(s)	2934
PstI	CTGCAG	1 cut(s)	639
PstNI	CAGNNNCTG	2 cut(s)	643, 1091
PsuI	RGATCY	4 cut(s)	1567, 1863, 1894, 2885
PsyI	GACNNNGTC	2 cut(s)	65, 544
PvuI	CGATCG	1 cut(s)	2718
RsaI	GTAC	9 cut(s)	376, 1034, 1630, 1712, 2472, 2840, 3103, 3128, 3376
RsaNI	GTAC	9 cut(s)	375, 1033, 1629, 1711, 2471, 2839, 3102, 3127, 3375
RseI	CAYNNNNRTG	1 cut(s)	2985
SacI	GAGCTC	2 cut(s)	257, 1334
SalI	GTCGAC	1 cut(s)	3391
SapI	GCTCTTC	1 cut(s)	1006
SatI	GCNGC	5 cut(s)	635, 1977, 2260, 3194, 3434
Sau96I	GGNCC	8 cut(s)	175, 971, 1372, 1586, 1871, 2162, 2225, 3329
SchI	GAGTC	7 cut(s)	270, 433, 931, 1683, 2330, 2742, 2788
SduI	GDGCHC	5 cut(s)	257, 1188, 1334, 1829, 2941
SfaNI	GCATC	5 cut(s)	42, 1837, 2378, 2456, 2524
SfcI	CTRYAG	2 cut(s)	483, 635
Sfr274I	CTCGAG	3 cut(s)	258, 2864, 2934
SinI	GGWCC	6 cut(s)	175, 971, 1372, 1586, 2225, 3329
SlaI	CTCGAG	3 cut(s)	258, 2864, 2934
SmiMI	CAYNNNNRTG	1 cut(s)	2985
SmlI	CTYRAG	9 cut(s)	258, 791, 935, 1545, 1634, 1835, 2682, 2864, 2934
SmoI	CTYRAG	9 cut(s)	258, 791, 935, 1545, 1634, 1835, 2682, 2864, 2934
SsiI	CCGC	9 cut(s)	43, 398, 583, 1660, 2091, 3098, 3311, 3332, 3365
SstI	GAGCTC	2 cut(s)	257, 1334
StyI	CCWWGG	1 cut(s)	2052
TaiI	ACGT	5 cut(s)	66, 893, 1199, 2601, 3107
TaqII	GACCGA	3 cut(s)	1124, 1280, 1360
TatI	WGTACW	2 cut(s)	1032, 2838
TscAI	CASTG	5 cut(s)	27, 124, 1630, 2134, 2269
TseFI	GTSAC	2 cut(s)	2554, 2791
TseI	GCWGC	5 cut(s)	634, 1976, 2259, 3193, 3433
Tsp45I	GTSAC	2 cut(s)	2554, 2791
TspDTI	ATGAA	9 cut(s)	605, 899, 1059, 1218, 1589, 2554, 2863, 2900, 3422
TspGWI	ACGGA	6 cut(s)	133, 333, 589, 3189, 3210, 3435
TspRI	CASTG	5 cut(s)	27, 124, 1630, 2134, 2269
Tth111I	GACNNNGTC	2 cut(s)	65, 544
Vha464I	CTTAAG	1 cut(s)	1835
VneI	GTGCAC	1 cut(s)	1825
VpaK11BI	GGWCC	6 cut(s)	175, 971, 1372, 1586, 2225, 3329
VspI	ATTAAT	1 cut(s)	1053
XapI	RAATTY	9 cut(s)	403, 532, 577, 592, 664, 914, 1281, 2022, 2870
XbaI	TCTAGA	1 cut(s)	3187
XceI	RCATGY	2 cut(s)	1825, 3141
XhoI	CTCGAG	3 cut(s)	258, 2864, 2934
XmiI	GTMKAC	3 cut(s)	2770, 3165, 3392
Zsp2I	ATGCAT	1 cut(s)	1382

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.