MD17G1060100.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
4881817 .. 4884279
2463 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1060100.v1.1.491

Sequence Viewer

Length: 1323 bp
ATGCTTTCGAATCGTTATAGTGCTAAGGTGAAAAAAATCCCAACCAGTCTCGGCCAAATAAGTGATCTGACGTATCTATCCTTATCTGGCAATCTCCTTATTGGTGTCATTCCGTCTAGTTTGGGGCTGCTTGCCTCTTTAGAAGTGCTTGAACTTTCTTCAAACTATCTCACTGGTGAGATACCGAAAGATATTGTGAATCTGCTGTTCTTCTGCTCGACAAGAATAATATTTCTGGCAGCTTCTGATTTTCAAGGAAGAGTTGGCGATTCACAACCTTTTGCTGCTTCACCAATGGGAGGTCCAACTCAGGAGAGTGGGAACGGTTTCAGTCCAATTGAGATAGCATCCATTACTTCTGCAGTGGCCATAGTTTCAGTGCTGCTTGCTCTTGTTGTTCTGTTCTTATATACACGGAAATGGAATCCAAAGTCTGGAACTCAAGGGTCTACCAGGAAGGAAGTTACAGTTTTCACAGACATTGGGGTTCCCACCTGCATCGGGAATGGAGGTTTTGGAGCTACCTACAAGGCAGAGATATCACCTGGAATCGTGGTGGCAATTAAACGGCTTTCAGTTGGAAGGTTCCCAGGAGTCCAACAGTTTCACGCAGAAATTAAAACCCTTGGAAGGCTTCGGCATCCAAATCTTGTCACTTTGCTTGGTTATCACGCCAGTGATACAGAGATGTTTCTAATATACAACTATTTGGCGGGTGGTAATTTGGAAAAGTTTATTCAGGAAAGGTCTACAAGGGATGTGGATTGGAGGGTACTTCACAAGATTGCTTTGGACATAGCCCGTGCACTTGCCTACCTACATGATCAATGCGTACCACGTGTCCTTCATCGGGATGTCAAGCCGAGCAATATTTTGTTGGATGATGATTTTAATGCGTATCTCTCAGGCTTTGGTTTGGCCAGACTTCTGGGAACTTCAGAGACCCATGCTACTACCGGCGTTGCTGGAACTATTGGATATATTGCCCCAGAATATGCAATGACTTGCCGTGTTTCAGATAAGGCTGATGTATATAGTTATGGCGTTGTGCTACTGGAGTTACTCTCTGACAAGAAGGCACTGGATCCCTCCTTCTCTTCGTATGGAAATGGATTCAACATCGTTCAGTGGTCATGTATGCTTCTTCGGCAAGGCCGGGCAAAGGAATTCTTCACCGCTGGGTTATGGGATGCAGGTCCCCATGATGACTTAGTAGAAGTTCTTCACTTGGCAGTAGTGTGCACGGTTGACTCTCTCTCAACCAGGCCTACAATGAGGCAAGTTGTACGACGGCTTAAGCAACTTCAGCCTCCATCTTGCTAG

Protein Analysis

441

Amino Acids

47.94

Weight (kDa)

8.37

Isoelectric Point (pI)

30.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 166 - 432 1.8e-38 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 167 - 363 1.1e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0010808)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 503
Acc36I ACCTGC 2 cut(s) 503, 1184
AccB7I CCANNNNNTGG 1 cut(s) 434
AccI GTMKAC 2 cut(s) 449, 749
AciI CCGC 2 cut(s) 713, 1176
AclWI GGATC 2 cut(s) 1079, 1092
AcoI YGGCCR 3 cut(s) 52, 366, 918
AcsI RAATTY 1 cut(s) 1166
AcuI CTGAAG 2 cut(s) 921, 1289
AcvI CACGTG 1 cut(s) 839
AfaI GTAC 3 cut(s) 774, 834, 1287
AfiI CCNNNNNNNGG 6 cut(s) 299, 434, 501, 630, 850, 1162
AflII CTTAAG 1 cut(s) 1295
AflIII ACRYGT 1 cut(s) 838
AgsI TTSAA 4 cut(s) 152, 162, 254, 1117
AjnI CCWGG 4 cut(s) 452, 544, 589, 1262
AleI CACNNNNGTG 1 cut(s) 675
AluBI AGCT 2 cut(s) 242, 521
AluI AGCT 2 cut(s) 242, 521
Alw21I GWGCWC 2 cut(s) 808, 1244
Alw26I GTCTC 2 cut(s) 53, 935
Alw44I GTGCAC 2 cut(s) 804, 1240
AlwI GGATC 2 cut(s) 1079, 1092
AlwNI CAGNNNCTG 1 cut(s) 245
AoxI GGCC 5 cut(s) 52, 366, 918, 1153, 1265
ApaLI GTGCAC 2 cut(s) 804, 1240
ApeKI GCWGC 4 cut(s) 127, 239, 284, 382
ApoI RAATTY 1 cut(s) 1166
Asp700I GAANNNNTTC 2 cut(s) 326, 1221
AspS9I GGNCC 2 cut(s) 302, 1196
AsuC2I CCSGG 1 cut(s) 1157
AsuHPI GGTGA 5 cut(s) 40, 188, 282, 534, 1165
AsuII TTCGAA 1 cut(s) 8
AvaII GGWCC 2 cut(s) 302, 1196
BaeGI GKGCMC 2 cut(s) 808, 1244
BalI TGGCCA 2 cut(s) 368, 920
BamHI GGATCC 1 cut(s) 1084
BarI GAAGNNNNNNTAC 2 cut(s) 1206, 1238
BbrPI CACGTG 1 cut(s) 839
Bbv12I GWGCWC 2 cut(s) 808, 1244
BbvI GCAGC 4 cut(s) 114, 251, 271, 369
BccI CCATC 1 cut(s) 1321
BceAI ACGGC 3 cut(s) 584, 993, 1307
BciT130I CCWGG 4 cut(s) 454, 546, 591, 1264
BclI TGATCA 1 cut(s) 823
BcnI CCSGG 1 cut(s) 1157
BcoDI GTCTC 2 cut(s) 53, 935
BfaI CTAG 2 cut(s) 117, 1321
BfmI CTRYAG 1 cut(s) 360
BfrI CTTAAG 1 cut(s) 1295
BfuAI ACCTGC 2 cut(s) 503, 1184
BisI GCNGC 4 cut(s) 128, 240, 285, 383
BlsI GCNGC 4 cut(s) 129, 241, 286, 384
Bme1390I CCNGG 5 cut(s) 454, 546, 591, 1157, 1264
Bme18I GGWCC 2 cut(s) 302, 1196
BmgT120I GGNCC 2 cut(s) 302, 1196
BmiI GGNNCC 4 cut(s) 489, 587, 1086, 1198
BmrFI CCNGG 5 cut(s) 454, 546, 591, 1157, 1264
BmsI GCATC 4 cut(s) 356, 507, 649, 1180
BplI GAGNNNNNCTC 2 cut(s) 1049, 1081
BpmI CTGGAG 1 cut(s) 1076
Bpu10I CCTNAGC 1 cut(s) 24
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 1 cut(s) 426
BpuMI CCSGG 1 cut(s) 1157
BsaAI YACGTR 1 cut(s) 839
BsaI GGTCTC 1 cut(s) 935
BsaJI CCNNGG 2 cut(s) 589, 625
Bsc4I CCNNNNNNNGG 6 cut(s) 299, 434, 501, 630, 850, 1162
Bse118I RCCGGY 1 cut(s) 956
Bse1I ACTGG 5 cut(s) 45, 178, 675, 1059, 1086
Bse3DI GCAATG 1 cut(s) 1005
BseBI CCWGG 4 cut(s) 454, 546, 591, 1264
BseDI CCNNGG 2 cut(s) 589, 625
BseGI GGATG 6 cut(s) 347, 640, 763, 859, 886, 1195
BseLI CCNNNNNNNGG 6 cut(s) 299, 434, 501, 630, 850, 1162
BseMI GCAATG 1 cut(s) 1005
BseMII CTCAG 2 cut(s) 323, 918
BseNI ACTGG 5 cut(s) 45, 178, 675, 1059, 1086
BseSI GKGCMC 2 cut(s) 808, 1244
BseXI GCAGC 4 cut(s) 114, 251, 271, 369
BseYI CCCAGC 1 cut(s) 1178
BshFI GGCC 5 cut(s) 54, 368, 920, 1155, 1267
BsiHKAI GWGCWC 2 cut(s) 808, 1244
BsiSI CCGG 2 cut(s) 957, 1156
BslFI GGGAC 1 cut(s) 1182
BslI CCNNNNNNNGG 6 cut(s) 299, 434, 501, 630, 850, 1162
BsmAI GTCTC 2 cut(s) 53, 935
BsmFI GGGAC 1 cut(s) 1182
BsnI GGCC 5 cut(s) 54, 368, 920, 1155, 1267
Bso31I GGTCTC 1 cut(s) 935
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 2 cut(s) 808, 1244
Bsp143I GATC 3 cut(s) 64, 823, 1084
BspACI CCGC 2 cut(s) 713, 1176
BspANI GGCC 5 cut(s) 54, 368, 920, 1155, 1267
BspCNI CTCAG 2 cut(s) 322, 917
BspLI GGNNCC 4 cut(s) 489, 587, 1086, 1198
BspMAI CTGCAG 1 cut(s) 364
BspMI ACCTGC 2 cut(s) 503, 1184
BspPI GGATC 2 cut(s) 1079, 1092
BspT104I TTCGAA 1 cut(s) 8
BspTI CTTAAG 1 cut(s) 1295
BspTNI GGTCTC 1 cut(s) 935
BsrDI GCAATG 1 cut(s) 1005
BsrFI RCCGGY 1 cut(s) 956
BsrI ACTGG 5 cut(s) 45, 178, 675, 1059, 1086
BssAI RCCGGY 1 cut(s) 956
BssECI CCNNGG 2 cut(s) 589, 625
BssMI GATC 3 cut(s) 64, 823, 1084
BssT1I CCWWGG 1 cut(s) 625
Bst2UI CCWGG 4 cut(s) 454, 546, 591, 1264
Bst4CI ACNGT 4 cut(s) 326, 469, 603, 1246
Bst6I CTCTTC 2 cut(s) 253, 1102
BstAFI CTTAAG 1 cut(s) 1295
BstBAI YACGTR 1 cut(s) 839
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 2 cut(s) 132, 387
BstDEI CTNAG 4 cut(s) 24, 309, 904, 1210
BstF5I GGATG 6 cut(s) 347, 640, 763, 859, 886, 1195
BstKTI GATC 3 cut(s) 67, 826, 1087
BstMAI GTCTC 2 cut(s) 53, 935
BstMBI GATC 3 cut(s) 64, 823, 1084
BstMWI GCNNNNNNNGC 2 cut(s) 1147, 1306
BstNI CCWGG 4 cut(s) 454, 546, 591, 1264
BstSCI CCNGG 5 cut(s) 452, 544, 589, 1155, 1262
BstSFI CTRYAG 1 cut(s) 360
BstSLI GKGCMC 2 cut(s) 808, 1244
BstV1I GCAGC 4 cut(s) 114, 251, 271, 369
BstX2I RGATCY 1 cut(s) 1084
BstXI CCANNNNNNTGG 1 cut(s) 928
BstYI RGATCY 1 cut(s) 1084
BsuRI GGCC 5 cut(s) 54, 368, 920, 1155, 1267
BtsCI GGATG 6 cut(s) 347, 640, 763, 859, 886, 1195
BtsI GCAGTG 1 cut(s) 369
BtsIMutI CAGTG 6 cut(s) 171, 369, 384, 682, 1079, 1133
BveI ACCTGC 2 cut(s) 503, 1184
Cac8I GCNNGC 2 cut(s) 132, 387
CaiI CAGNNNCTG 1 cut(s) 245
Cfr10I RCCGGY 1 cut(s) 956
Cfr13I GGNCC 2 cut(s) 302, 1196
Csp6I GTAC 3 cut(s) 773, 833, 1286
CspCI CAANNNNNGTGG 2 cut(s) 741, 776
CviAII CATG 4 cut(s) 821, 947, 1134, 1202
CviQI GTAC 3 cut(s) 773, 833, 1286
DdeI CTNAG 4 cut(s) 24, 309, 904, 1210
DpnI GATC 3 cut(s) 66, 825, 1086
DpnII GATC 3 cut(s) 64, 823, 1084
EaeI YGGCCR 3 cut(s) 52, 366, 918
Eam1104I CTCTTC 2 cut(s) 253, 1102
EarI CTCTTC 2 cut(s) 253, 1102
Eco130I CCWWGG 1 cut(s) 625
Eco147I AGGCCT 1 cut(s) 1267
Eco31I GGTCTC 1 cut(s) 935
Eco32I GATATC 1 cut(s) 540
Eco47I GGWCC 2 cut(s) 302, 1196
Eco57I CTGAAG 2 cut(s) 921, 1289
Eco72I CACGTG 1 cut(s) 839
EcoO109I RGGNCCY 1 cut(s) 1196
EcoRI GAATTC 1 cut(s) 1166
EcoRII CCWGG 4 cut(s) 452, 544, 589, 1262
EcoRV GATATC 1 cut(s) 540
EcoT14I CCWWGG 1 cut(s) 625
ErhI CCWWGG 1 cut(s) 625
FaeI CATG 4 cut(s) 824, 950, 1137, 1205
FalI AAGNNNNNCTT 2 cut(s) 1154, 1186
FaqI GGGAC 1 cut(s) 1182
FatI CATG 4 cut(s) 820, 946, 1133, 1201
FauI CCCGC 1 cut(s) 706
FbaI TGATCA 1 cut(s) 823
FblI GTMKAC 2 cut(s) 449, 749
Fnu4HI GCNGC 4 cut(s) 128, 240, 285, 383
FokI GGATG 6 cut(s) 334, 627, 770, 866, 893, 1202
Fsp4HI GCNGC 4 cut(s) 128, 240, 285, 383
FspBI CTAG 2 cut(s) 117, 1321
GluI GCNGC 4 cut(s) 128, 240, 285, 383
GsaI CCCAGC 1 cut(s) 1182
GsuI CTGGAG 1 cut(s) 1076
HaeIII GGCC 5 cut(s) 54, 368, 920, 1155, 1267
HapII CCGG 2 cut(s) 957, 1156
Hin1II CATG 4 cut(s) 824, 950, 1137, 1205
HincII GTYRAC 1 cut(s) 1249
HindII GTYRAC 1 cut(s) 1249
HinfI GANTC 8 cut(s) 10, 199, 269, 424, 549, 594, 1113, 1250
HpaII CCGG 2 cut(s) 957, 1156
HphI GGTGA 5 cut(s) 40, 188, 282, 534, 1165
Hpy166II GTNNAC 5 cut(s) 450, 750, 806, 1242, 1249
Hpy188I TCNGA 5 cut(s) 69, 247, 940, 1018, 1069
Hpy188III TCNNGA 5 cut(s) 311, 435, 502, 740, 851
Hpy8I GTNNAC 5 cut(s) 450, 750, 806, 1242, 1249
Hpy99I CGWCG 1 cut(s) 1293
HpyAV CCTTC 6 cut(s) 451, 576, 624, 854, 1069, 1102
HpyCH4III ACNGT 4 cut(s) 326, 469, 603, 1246
HpyCH4IV ACGT 2 cut(s) 71, 838
HpyCH4V TGCA 6 cut(s) 362, 498, 806, 998, 1193, 1242
HpyF10VI GCNNNNNNNGC 2 cut(s) 1147, 1306
HpyF3I CTNAG 4 cut(s) 24, 309, 904, 1210
HpySE526I ACGT 2 cut(s) 71, 838
Hsp92II CATG 4 cut(s) 824, 950, 1137, 1205
Ksp22I TGATCA 1 cut(s) 823
Kzo9I GATC 3 cut(s) 64, 823, 1084
LmnI GCTCC 1 cut(s) 518
Lsp1109I GCAGC 4 cut(s) 114, 251, 271, 369
LweI GCATC 4 cut(s) 356, 507, 649, 1180
MaeI CTAG 2 cut(s) 117, 1321
MaeII ACGT 2 cut(s) 71, 838
MaeIII GTNAC 3 cut(s) 463, 652, 1059
MalI GATC 3 cut(s) 66, 825, 1086
MboI GATC 3 cut(s) 64, 823, 1084
MboII GAAGA 7 cut(s) 150, 202, 270, 1089, 1136, 1162, 1214
MfeI CAATTG 1 cut(s) 336
MflI RGATCY 1 cut(s) 1084
MhlI GDGCHC 2 cut(s) 808, 1244
MlsI TGGCCA 2 cut(s) 368, 920
MluCI AATT 5 cut(s) 336, 561, 615, 721, 1166
MluNI TGGCCA 2 cut(s) 368, 920
MlyI GAGTC 2 cut(s) 603, 1244
MmeI TCCRAC 4 cut(s) 329, 559, 622, 858
MnlI CCTC 7 cut(s) 145, 293, 503, 762, 1099, 1269, 1320
Mox20I TGGCCA 2 cut(s) 368, 920
MroXI GAANNNNTTC 2 cut(s) 326, 1221
MscI TGGCCA 2 cut(s) 368, 920
MseI TTAA 4 cut(s) 564, 618, 891, 1296
MslI CAYNNNNRTG 3 cut(s) 418, 675, 852
Msp20I TGGCCA 2 cut(s) 368, 920
MspA1I CMGCKG 1 cut(s) 1178
MspCI CTTAAG 1 cut(s) 1295
MspI CCGG 2 cut(s) 957, 1156
MspR9I CCNGG 5 cut(s) 454, 546, 591, 1157, 1264
MunI CAATTG 1 cut(s) 336
MvaI CCWGG 4 cut(s) 454, 546, 591, 1264
MwoI GCNNNNNNNGC 2 cut(s) 1147, 1306
NciI CCSGG 1 cut(s) 1157
NdeII GATC 3 cut(s) 64, 823, 1084
NlaIII CATG 4 cut(s) 824, 950, 1137, 1205
NlaIV GGNNCC 4 cut(s) 489, 587, 1086, 1198
NmeAIII GCCGAG 2 cut(s) 30, 888
NmuCI GTSAC 1 cut(s) 652
NspV TTCGAA 1 cut(s) 8
OliI CACNNNNGTG 1 cut(s) 675
PaqCI CACCTGC 1 cut(s) 503
PceI AGGCCT 1 cut(s) 1267
PdmI GAANNNNTTC 2 cut(s) 326, 1221
PfeI GAWTC 6 cut(s) 10, 199, 269, 424, 549, 1113
PflMI CCANNNNNTGG 1 cut(s) 434
PkrI GCNGC 4 cut(s) 129, 241, 286, 384
PleI GAGTC 2 cut(s) 602, 1244
PmaCI CACGTG 1 cut(s) 839
PmlI CACGTG 1 cut(s) 839
PpsI GAGTC 2 cut(s) 602, 1244
Ppu21I YACGTR 1 cut(s) 839
PpuMI RGGWCCY 1 cut(s) 1196
Psp5II RGGWCCY 1 cut(s) 1196
Psp6I CCWGG 4 cut(s) 452, 544, 589, 1262
PspCI CACGTG 1 cut(s) 839
PspFI CCCAGC 1 cut(s) 1178
PspGI CCWGG 4 cut(s) 452, 544, 589, 1262
PspN4I GGNNCC 4 cut(s) 489, 587, 1086, 1198
PspPI GGNCC 2 cut(s) 302, 1196
PspPPI RGGWCCY 1 cut(s) 1196
PstI CTGCAG 1 cut(s) 364
PstNI CAGNNNCTG 1 cut(s) 245
PsuI RGATCY 1 cut(s) 1084
RsaI GTAC 3 cut(s) 774, 834, 1287
RsaNI GTAC 3 cut(s) 773, 833, 1286
RseI CAYNNNNRTG 3 cut(s) 418, 675, 852
SaqAI TTAA 4 cut(s) 564, 618, 891, 1296
SatI GCNGC 4 cut(s) 128, 240, 285, 383
Sau3AI GATC 3 cut(s) 64, 823, 1084
Sau96I GGNCC 2 cut(s) 302, 1196
SchI GAGTC 2 cut(s) 603, 1244
ScrFI CCNGG 5 cut(s) 454, 546, 591, 1157, 1264
SduI GDGCHC 2 cut(s) 808, 1244
SfaNI GCATC 4 cut(s) 356, 507, 649, 1180
SfcI CTRYAG 1 cut(s) 360
SfuI TTCGAA 1 cut(s) 8
SinI GGWCC 2 cut(s) 302, 1196
SmiMI CAYNNNNRTG 3 cut(s) 418, 675, 852
SmlI CTYRAG 2 cut(s) 441, 1295
SmoI CTYRAG 2 cut(s) 441, 1295
Sse9I AATT 5 cut(s) 336, 561, 615, 721, 1166
SseBI AGGCCT 1 cut(s) 1267
SsiI CCGC 2 cut(s) 713, 1176
SspI AATATT 2 cut(s) 231, 871
SspMI CTAG 2 cut(s) 117, 1321
StuI AGGCCT 1 cut(s) 1267
StyD4I CCNGG 5 cut(s) 452, 544, 589, 1155, 1262
StyI CCWWGG 1 cut(s) 625
TaaI ACNGT 4 cut(s) 326, 469, 603, 1246
TaiI ACGT 2 cut(s) 74, 841
TaqI TCGA 2 cut(s) 8, 218
TasI AATT 5 cut(s) 336, 561, 615, 721, 1166
TfiI GAWTC 6 cut(s) 10, 199, 269, 424, 549, 1113
Tru1I TTAA 4 cut(s) 564, 618, 891, 1296
Tru9I TTAA 4 cut(s) 564, 618, 891, 1296
TscAI CASTG 6 cut(s) 178, 369, 384, 682, 1086, 1133
TseFI GTSAC 1 cut(s) 652
TseI GCWGC 4 cut(s) 127, 239, 284, 382
Tsp45I GTSAC 1 cut(s) 652
TspDTI ATGAA 1 cut(s) 836
TspGWI ACGGA 2 cut(s) 102, 430
TspRI CASTG 6 cut(s) 178, 369, 384, 682, 1086, 1133
Van91I CCANNNNNTGG 1 cut(s) 434
Vha464I CTTAAG 1 cut(s) 1295
VneI GTGCAC 2 cut(s) 804, 1240
VpaK11BI GGWCC 2 cut(s) 302, 1196
XapI RAATTY 1 cut(s) 1166
XmiI GTMKAC 2 cut(s) 449, 749
XmnI GAANNNNTTC 2 cut(s) 326, 1221
XspI CTAG 2 cut(s) 117, 1321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.