pycom17g05980
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
4206548 .. 4207615
1068 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g05980.1

Sequence Viewer

Length: 1068 bp
ATGGGAGGTCCAACTCAGGAGAGTGGGAATGGTTTCAGTCCAATTGAGATAGCATCCATTACATCTGCAGTGGCCATAGTTTCAGTGCTGCTTGCTCTTGTTGTTCTGTTCTTATATACACGGAAATGGAATCGAACTCAAGGGCCTACCGGGAAGGAAGTTACAGTTTTCACAAACATTGGGGTTCCATTGACCTTTGAGAATGTTGTGCTAGCCACAGGAGGTTTCAATGCTAGCAACTGCATTGGGAATGGAGGTTTTGGAGCTACTTACAAGGCAGAGATATCACCTGGAATCGTGGTGGCAATTAAACGGCTATCAGATGGAAGGTTCCAAGGAGTTCAACAGTTTCATGCAGAAATTAAAATCCTTGGAAGGCTTCGCCATCCAAATCTTGTCACTTTGCTTGGTTATCATGCCAGTGATACAGAGATGTTTCTAATATACAACTATTTGGCGGGTGGTAATTTGGAAAAGTTTATTCAGGAAAGGTCTACAAGGGCTGTGGATTGGAAAGTACTTCACAAGATTGCTTTGGACGTAGCCCGTGCACTTGCCTACCTACATGATCAATGCGTATCACGTGTACTTCATCGGGACGTCAAGCCGAGCAATATTTTGTTGGATGATGATTTTAATGCGTATCTCTCAGGCTTTGGTTTGGCCAGACTTCTGGGAACTTCAGAGACTCATGCTACTACCGGCGTTGCTGGAACGTTTGGATATGTTGCCCCGGAATATGCAATGACTTGCCGTGTTTCAGATAAGGCTGATGTTTATAGTTATGGCATTGTGCTACAGGAGTTACTCTCTGACAAGAAGGCACTGGATCCATCCTTCTCTTCTTATGGAAATGGATTCAACATCGTTCAGTGGTCATGTATGCTTCTTCGGCAAGGCCGGGCAAAGGAATTCTTCACCGCTGGGTTATGGGATGCAGGTCCCCATGATGACTTAGTAGAAGTTCTGCACTTGGCAGTAGTGTGCACGGTTGACTCTCTCTCAACCAGGCCTACAATGAGGCAAGTTGTACGACGGCTTAAGCAACTTCAGCCTCCATGTTGCTAG

Protein Analysis

356

Amino Acids

38.82

Weight (kDa)

8.11

Isoelectric Point (pI)

32.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 78 - 279 4.5e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 79 - 347 1.1e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010808)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 603
Acc36I ACCTGC 1 cut(s) 929
AccI GTMKAC 1 cut(s) 494
AciI CCGC 2 cut(s) 458, 921
AclI AACGTT 1 cut(s) 716
AclWI GGATC 2 cut(s) 824, 837
AcoI YGGCCR 2 cut(s) 72, 663
AcsI RAATTY 1 cut(s) 911
AcuI CTGAAG 2 cut(s) 666, 1034
AcvI CACGTG 1 cut(s) 584
AcyI GRCGYC 1 cut(s) 600
AfaI GTAC 3 cut(s) 519, 588, 1032
AfiI CCNNNNNNNGG 1 cut(s) 907
AflII CTTAAG 1 cut(s) 1040
AflIII ACRYGT 1 cut(s) 583
AgsI TTSAA 3 cut(s) 229, 344, 862
AjnI CCWGG 2 cut(s) 289, 1007
AluBI AGCT 1 cut(s) 266
AluI AGCT 1 cut(s) 266
Alw21I GWGCWC 2 cut(s) 553, 989
Alw26I GTCTC 1 cut(s) 680
Alw44I GTGCAC 2 cut(s) 549, 985
AlwI GGATC 2 cut(s) 824, 837
AoxI GGCC 5 cut(s) 72, 143, 663, 898, 1010
ApaLI GTGCAC 2 cut(s) 549, 985
ApeKI GCWGC 1 cut(s) 88
ApoI RAATTY 1 cut(s) 911
Asp700I GAANNNNTTC 1 cut(s) 32
AspS9I GGNCC 3 cut(s) 8, 143, 941
AsuC2I CCSGG 3 cut(s) 151, 734, 902
AsuHPI GGTGA 2 cut(s) 279, 910
AsuNHI GCTAGC 2 cut(s) 211, 233
AvaII GGWCC 2 cut(s) 8, 941
BaeGI GKGCMC 2 cut(s) 553, 989
BalI TGGCCA 2 cut(s) 74, 665
BamHI GGATCC 1 cut(s) 829
BbrPI CACGTG 1 cut(s) 584
Bbv12I GWGCWC 2 cut(s) 553, 989
BbvI GCAGC 1 cut(s) 75
BccI CCATC 3 cut(s) 317, 393, 841
BceAI ACGGC 3 cut(s) 329, 738, 1052
BciT130I CCWGG 2 cut(s) 291, 1009
BclI TGATCA 1 cut(s) 568
BcnI CCSGG 3 cut(s) 151, 734, 902
BcoDI GTCTC 1 cut(s) 680
BfaI CTAG 3 cut(s) 212, 234, 1066
BfmI CTRYAG 2 cut(s) 66, 797
BfrI CTTAAG 1 cut(s) 1040
BfuAI ACCTGC 1 cut(s) 929
BisI GCNGC 1 cut(s) 89
BlsI GCNGC 1 cut(s) 90
BmcAI AGTACT 1 cut(s) 519
Bme1390I CCNGG 5 cut(s) 151, 291, 734, 902, 1009
Bme18I GGWCC 2 cut(s) 8, 941
BmgT120I GGNCC 3 cut(s) 8, 143, 941
BmiI GGNNCC 4 cut(s) 186, 332, 831, 943
BmrFI CCNGG 5 cut(s) 151, 291, 734, 902, 1009
BmsI GCATC 2 cut(s) 62, 925
BmtI GCTAGC 2 cut(s) 215, 237
BplI GAGNNNNNCTC 2 cut(s) 794, 826
BpuEI CTTGAG 1 cut(s) 123
BpuMI CCSGG 3 cut(s) 151, 734, 902
BsaAI YACGTR 1 cut(s) 584
BsaHI GRCGYC 1 cut(s) 600
BsaJI CCNNGG 3 cut(s) 334, 370, 732
Bsc4I CCNNNNNNNGG 1 cut(s) 907
Bse118I RCCGGY 1 cut(s) 701
Bse1I ACTGG 2 cut(s) 420, 831
Bse3DI GCAATG 1 cut(s) 750
BseBI CCWGG 2 cut(s) 291, 1009
BseDI CCNNGG 3 cut(s) 334, 370, 732
BseGI GGATG 5 cut(s) 53, 385, 631, 833, 940
BseLI CCNNNNNNNGG 1 cut(s) 907
BseMI GCAATG 1 cut(s) 750
BseMII CTCAG 2 cut(s) 29, 663
BseNI ACTGG 2 cut(s) 420, 831
BseSI GKGCMC 2 cut(s) 553, 989
BseXI GCAGC 1 cut(s) 75
BseYI CCCAGC 1 cut(s) 923
BsgI GTGCAG 1 cut(s) 953
BshFI GGCC 5 cut(s) 74, 145, 665, 900, 1012
BsiHKAI GWGCWC 2 cut(s) 553, 989
BsiSI CCGG 4 cut(s) 150, 702, 734, 901
BslFI GGGAC 2 cut(s) 611, 927
BslI CCNNNNNNNGG 1 cut(s) 907
BsmAI GTCTC 1 cut(s) 680
BsmFI GGGAC 2 cut(s) 611, 927
BsnI GGCC 5 cut(s) 74, 145, 665, 900, 1012
Bsp1286I GDGCHC 2 cut(s) 553, 989
Bsp143I GATC 2 cut(s) 568, 829
BspACI CCGC 2 cut(s) 458, 921
BspANI GGCC 5 cut(s) 74, 145, 665, 900, 1012
BspCNI CTCAG 2 cut(s) 28, 662
BspLI GGNNCC 4 cut(s) 186, 332, 831, 943
BspMAI CTGCAG 1 cut(s) 70
BspMI ACCTGC 1 cut(s) 929
BspOI GCTAGC 2 cut(s) 215, 237
BspPI GGATC 2 cut(s) 824, 837
BspTI CTTAAG 1 cut(s) 1040
BsrDI GCAATG 1 cut(s) 750
BsrFI RCCGGY 1 cut(s) 701
BsrI ACTGG 2 cut(s) 420, 831
BssAI RCCGGY 1 cut(s) 701
BssECI CCNNGG 3 cut(s) 334, 370, 732
BssMI GATC 2 cut(s) 568, 829
BssNI GRCGYC 1 cut(s) 600
BssT1I CCWWGG 2 cut(s) 334, 370
Bst2UI CCWGG 2 cut(s) 291, 1009
Bst4CI ACNGT 3 cut(s) 166, 348, 991
Bst6I CTCTTC 1 cut(s) 847
BstACI GRCGYC 1 cut(s) 600
BstAFI CTTAAG 1 cut(s) 1040
BstBAI YACGTR 1 cut(s) 584
BstC8I GCNNGC 3 cut(s) 93, 213, 235
BstDEI CTNAG 3 cut(s) 15, 649, 955
BstF5I GGATG 5 cut(s) 53, 385, 631, 833, 940
BstKTI GATC 2 cut(s) 571, 832
BstMAI GTCTC 1 cut(s) 680
BstMBI GATC 2 cut(s) 568, 829
BstMWI GCNNNNNNNGC 2 cut(s) 892, 1051
BstNI CCWGG 2 cut(s) 291, 1009
BstSCI CCNGG 5 cut(s) 149, 289, 732, 900, 1007
BstSFI CTRYAG 2 cut(s) 66, 797
BstSLI GKGCMC 2 cut(s) 553, 989
BstV1I GCAGC 1 cut(s) 75
BstX2I RGATCY 1 cut(s) 829
BstXI CCANNNNNNTGG 1 cut(s) 673
BstYI RGATCY 1 cut(s) 829
BsuRI GGCC 5 cut(s) 74, 145, 665, 900, 1012
BtsCI GGATG 5 cut(s) 53, 385, 631, 833, 940
BtsI GCAGTG 1 cut(s) 75
BtsIMutI CAGTG 5 cut(s) 75, 90, 427, 824, 878
BveI ACCTGC 1 cut(s) 929
Cac8I GCNNGC 3 cut(s) 93, 213, 235
Cfr10I RCCGGY 1 cut(s) 701
Cfr13I GGNCC 3 cut(s) 8, 143, 941
Csp6I GTAC 3 cut(s) 518, 587, 1031
CspCI CAANNNNNGTGG 2 cut(s) 486, 521
CviAII CATG 7 cut(s) 353, 416, 566, 692, 879, 947, 1059
CviQI GTAC 3 cut(s) 518, 587, 1031
DdeI CTNAG 3 cut(s) 15, 649, 955
DpnI GATC 2 cut(s) 570, 831
DpnII GATC 2 cut(s) 568, 829
EaeI YGGCCR 2 cut(s) 72, 663
Eam1104I CTCTTC 1 cut(s) 847
EarI CTCTTC 1 cut(s) 847
Eco130I CCWWGG 2 cut(s) 334, 370
Eco147I AGGCCT 1 cut(s) 1012
Eco32I GATATC 1 cut(s) 285
Eco47I GGWCC 2 cut(s) 8, 941
Eco57I CTGAAG 2 cut(s) 666, 1034
Eco72I CACGTG 1 cut(s) 584
EcoO109I RGGNCCY 2 cut(s) 143, 941
EcoRI GAATTC 1 cut(s) 911
EcoRII CCWGG 2 cut(s) 289, 1007
EcoRV GATATC 1 cut(s) 285
EcoT14I CCWWGG 2 cut(s) 334, 370
ErhI CCWWGG 2 cut(s) 334, 370
FaeI CATG 7 cut(s) 356, 419, 569, 695, 882, 950, 1062
FalI AAGNNNNNCTT 2 cut(s) 899, 931
FaqI GGGAC 2 cut(s) 611, 927
FatI CATG 7 cut(s) 352, 415, 565, 691, 878, 946, 1058
FauI CCCGC 1 cut(s) 451
FbaI TGATCA 1 cut(s) 568
FblI GTMKAC 1 cut(s) 494
Fnu4HI GCNGC 1 cut(s) 89
FokI GGATG 5 cut(s) 40, 372, 638, 820, 947
Fsp4HI GCNGC 1 cut(s) 89
FspBI CTAG 3 cut(s) 212, 234, 1066
GluI GCNGC 1 cut(s) 89
GsaI CCCAGC 1 cut(s) 927
HaeIII GGCC 5 cut(s) 74, 145, 665, 900, 1012
HapII CCGG 4 cut(s) 150, 702, 734, 901
Hin1I GRCGYC 1 cut(s) 600
Hin1II CATG 7 cut(s) 356, 419, 569, 695, 882, 950, 1062
HincII GTYRAC 1 cut(s) 994
HindII GTYRAC 1 cut(s) 994
HinfI GANTC 5 cut(s) 130, 294, 688, 858, 995
HpaII CCGG 4 cut(s) 150, 702, 734, 901
HphI GGTGA 2 cut(s) 279, 910
Hpy166II GTNNAC 5 cut(s) 495, 551, 587, 987, 994
Hpy188I TCNGA 4 cut(s) 322, 685, 763, 814
Hpy188III TCNNGA 3 cut(s) 17, 485, 596
Hpy8I GTNNAC 5 cut(s) 495, 551, 587, 987, 994
Hpy99I CGWCG 1 cut(s) 1038
HpyAV CCTTC 5 cut(s) 148, 321, 369, 814, 847
HpyCH4III ACNGT 3 cut(s) 166, 348, 991
HpyCH4IV ACGT 4 cut(s) 540, 583, 600, 716
HpyCH4V TGCA 8 cut(s) 68, 243, 356, 551, 743, 938, 970, 987
HpyF10VI GCNNNNNNNGC 2 cut(s) 892, 1051
HpyF3I CTNAG 3 cut(s) 15, 649, 955
HpySE526I ACGT 4 cut(s) 540, 583, 600, 716
Hsp92I GRCGYC 1 cut(s) 600
Hsp92II CATG 7 cut(s) 356, 419, 569, 695, 882, 950, 1062
Ksp22I TGATCA 1 cut(s) 568
Kzo9I GATC 2 cut(s) 568, 829
LmnI GCTCC 1 cut(s) 263
Lsp1109I GCAGC 1 cut(s) 75
LweI GCATC 2 cut(s) 62, 925
MaeI CTAG 3 cut(s) 212, 234, 1066
MaeII ACGT 4 cut(s) 540, 583, 600, 716
MaeIII GTNAC 3 cut(s) 160, 397, 804
MalI GATC 2 cut(s) 570, 831
MboI GATC 2 cut(s) 568, 829
MboII GAAGA 3 cut(s) 834, 881, 907
MfeI CAATTG 1 cut(s) 42
MflI RGATCY 1 cut(s) 829
MhlI GDGCHC 2 cut(s) 553, 989
MlsI TGGCCA 2 cut(s) 74, 665
MluCI AATT 5 cut(s) 42, 306, 360, 466, 911
MluNI TGGCCA 2 cut(s) 74, 665
MlyI GAGTC 2 cut(s) 682, 989
MmeI TCCRAC 2 cut(s) 35, 603
MnlI CCTC 4 cut(s) 215, 248, 1014, 1065
Mox20I TGGCCA 2 cut(s) 74, 665
MroXI GAANNNNTTC 1 cut(s) 32
MscI TGGCCA 2 cut(s) 74, 665
MseI TTAA 4 cut(s) 309, 363, 636, 1041
MslI CAYNNNNRTG 2 cut(s) 124, 420
Msp20I TGGCCA 2 cut(s) 74, 665
MspA1I CMGCKG 1 cut(s) 923
MspCI CTTAAG 1 cut(s) 1040
MspI CCGG 4 cut(s) 150, 702, 734, 901
MspR9I CCNGG 5 cut(s) 151, 291, 734, 902, 1009
MunI CAATTG 1 cut(s) 42
MvaI CCWGG 2 cut(s) 291, 1009
MwoI GCNNNNNNNGC 2 cut(s) 892, 1051
NciI CCSGG 3 cut(s) 151, 734, 902
NdeII GATC 2 cut(s) 568, 829
NheI GCTAGC 2 cut(s) 211, 233
NlaIII CATG 7 cut(s) 356, 419, 569, 695, 882, 950, 1062
NlaIV GGNNCC 4 cut(s) 186, 332, 831, 943
NmeAIII GCCGAG 1 cut(s) 633
NmuCI GTSAC 1 cut(s) 397
PceI AGGCCT 1 cut(s) 1012
PdmI GAANNNNTTC 1 cut(s) 32
PfeI GAWTC 3 cut(s) 130, 294, 858
PkrI GCNGC 1 cut(s) 90
PleI GAGTC 2 cut(s) 682, 989
PmaCI CACGTG 1 cut(s) 584
PmlI CACGTG 1 cut(s) 584
PpsI GAGTC 2 cut(s) 682, 989
Ppu21I YACGTR 1 cut(s) 584
PpuMI RGGWCCY 1 cut(s) 941
Psp1406I AACGTT 1 cut(s) 716
Psp5II RGGWCCY 1 cut(s) 941
Psp6I CCWGG 2 cut(s) 289, 1007
PspCI CACGTG 1 cut(s) 584
PspFI CCCAGC 1 cut(s) 923
PspGI CCWGG 2 cut(s) 289, 1007
PspN4I GGNNCC 4 cut(s) 186, 332, 831, 943
PspPI GGNCC 3 cut(s) 8, 143, 941
PspPPI RGGWCCY 1 cut(s) 941
PstI CTGCAG 1 cut(s) 70
PsuI RGATCY 1 cut(s) 829
RsaI GTAC 3 cut(s) 519, 588, 1032
RsaNI GTAC 3 cut(s) 518, 587, 1031
RseI CAYNNNNRTG 2 cut(s) 124, 420
SaqAI TTAA 4 cut(s) 309, 363, 636, 1041
SatI GCNGC 1 cut(s) 89
Sau3AI GATC 2 cut(s) 568, 829
Sau96I GGNCC 3 cut(s) 8, 143, 941
ScaI AGTACT 1 cut(s) 519
SchI GAGTC 2 cut(s) 682, 989
ScrFI CCNGG 5 cut(s) 151, 291, 734, 902, 1009
SduI GDGCHC 2 cut(s) 553, 989
SfaNI GCATC 2 cut(s) 62, 925
SfcI CTRYAG 2 cut(s) 66, 797
SinI GGWCC 2 cut(s) 8, 941
SmiMI CAYNNNNRTG 2 cut(s) 124, 420
SmlI CTYRAG 2 cut(s) 138, 1040
SmoI CTYRAG 2 cut(s) 138, 1040
Sse9I AATT 5 cut(s) 42, 306, 360, 466, 911
SseBI AGGCCT 1 cut(s) 1012
SsiI CCGC 2 cut(s) 458, 921
SspI AATATT 1 cut(s) 616
SspMI CTAG 3 cut(s) 212, 234, 1066
StuI AGGCCT 1 cut(s) 1012
StyD4I CCNGG 5 cut(s) 149, 289, 732, 900, 1007
StyI CCWWGG 2 cut(s) 334, 370
TaaI ACNGT 3 cut(s) 166, 348, 991
TaiI ACGT 4 cut(s) 543, 586, 603, 719
TaqI TCGA 1 cut(s) 133
TasI AATT 5 cut(s) 42, 306, 360, 466, 911
TatI WGTACW 2 cut(s) 517, 586
TfiI GAWTC 3 cut(s) 130, 294, 858
Tru1I TTAA 4 cut(s) 309, 363, 636, 1041
Tru9I TTAA 4 cut(s) 309, 363, 636, 1041
TscAI CASTG 5 cut(s) 75, 90, 427, 831, 878
TseFI GTSAC 1 cut(s) 397
TseI GCWGC 1 cut(s) 88
Tsp45I GTSAC 1 cut(s) 397
TspDTI ATGAA 2 cut(s) 341, 581
TspGWI ACGGA 1 cut(s) 136
TspRI CASTG 5 cut(s) 75, 90, 427, 831, 878
Vha464I CTTAAG 1 cut(s) 1040
VneI GTGCAC 2 cut(s) 549, 985
VpaK11BI GGWCC 2 cut(s) 8, 941
XapI RAATTY 1 cut(s) 911
XmiI GTMKAC 1 cut(s) 494
XmnI GAANNNNTTC 1 cut(s) 32
XspI CTAG 3 cut(s) 212, 234, 1066
ZraI GACGTC 1 cut(s) 601
ZrmI AGTACT 1 cut(s) 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.