AT3G03140

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0006536
Physical Location & Seq
Forward (+)
723878 .. 727531
3654 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G03140.1

Sequence Viewer

Length: 2310 bp
ATGGCAAGTCCAGGATCAGGTGCGGTTGATTGGACTGTGGGATCGATTGTGTGGGTGAGGAGGAGGAATGGCTCGTGGTGGCCGGGGAGGATACTTGGACAAGAAGATCTTGACTCTACGCATATCACGTCGCCACGATCTGGAACTCCGGTGAAGCTCCTCGGGAGAGAAGATGCAAGTGTGGATTGGTACAATTTAGAGAAATCCAAGCGGGTCAAGCCATTTCGGTGTGGCGATTTTGATGAATGCATTGAGAGGGTAGAATCTTCGCAAGCGATGATAATAAAAAAGAGAGAGAAGTATGCTCGGAGAGAAGATGCCATTCTCCATGCCCTTGAACTGGAAAAGGAAATGCTGAAAAGAGAAGGGAAACTAGTCCCTGAAAAGGCTAGAGATGACTCTCTTGATGCAACCAAGGAGAGAATGGCTATAGTTAGGGTTCAGGATACCTCTAATGGGACACGGGAATCCACAGATTATCTAAGGACCAACCATGTTGGTGATGTTATGCATTTGCTGAGAGATAAAGAGGAAGATCAACCAAGTTGTGAGGATGAGGCTGTGCCTCGAATGAGAGGCTTGCAGGACTTTGGACTTAGAACCGCCTCTTCAAAGCGAAAGATTTCATGTTCCAATGGTCCTGATACTTCCTTTAAGTATCTTGCCAGAAGCAATTCTTCAGCTTCTTCCAGTGGGGATCATAGCATGGAGAGGCCCATTTATACCCTCGGAAAGGAGAAAACTAAGAGTAGGGCGGAGGCTAAAAGGACTAAATATATGTTTACACCAAGTGAATCTAATGATGTTTCAGACCTACATGAGAATTTGCTAAGCCACAGGGACGCAATGCATTCCTCCTTTGCCGGTGGTGATACTCGTTATTCAGATTATGACCCTCCTAATTTTTTGGAAGATATGGAATCAGATTATTCTGAATCTGAAACTGATTCTTCTGATATGGAGGAGGATACTGATGATGACATTCCCTTGCTGTCAGGAGCTGGGCGTCATTCCGAGCGACGCAATACTTTTAGTAGACATACGTCAGGAGAAGATGAAAGTACAAGCAGTGAGGAAGATCATTATGAGTCATCTATTTCTGGCGACTCTTCCTACCTTTATTCCCAAAATCCTAATAATGAGGCTAGTACGGTTTCCAACTGGCAGCACAAGGGAAAAAGAAACTTCCGGACTCTTCCAAGAAGATCTGCACGGAAGAGAAAATTGCACCGTAATCGTCTAGAAGATGGAAGATATTGTGAATATAAGAGAAGGGCATTTGGCCAAAAGCCTATGGGTTATGGGTTAGATTTTAATGGGATAAATGATATGAGCGATGGAACTGATGACACTGATCCCAACGAAAGGCAGTTCGGTGACAGAATGATTGTACCAGGTGATGATTATCAGCTCTCAAATGTGGTTGCATCTAGATGTAAGAACATCTACAGCCATGATATGCTGGACTGGGATGATGACCCTTGGGAAGGCCGGATTGGTATGAAGAAGCGAGGGGAGGAAAAACTCGAAGGTTTAGGTCAGGAGTTTGATGTTTCTGAACGACATTTTGGCAGAAAAACGTATTCTTCATTGATGGATGTGGATTTAGAAGTGCGAGGAAGCTATCAGAAAGGGCCTGTCCCAATTGTCTCCCTTATGAGTAAGTTAAATGGCAGAGCAATCATTGGGCATCCGGTCGAAGTCGAAGTCTTAGCAGATGGTTCCTCCGAGTCATATATTCAGACAATTGATTACTTTGGTAATGAAACAACTTACCAGGACAAAACCTTTCTTCTGCCCTCTGCTTGGAAGACTGCAAGGCGGAGTAATTCCCGGGTTCCACGGCTGCAGCCGTTCTCATCGTCCGTAGAAGCGGATGATGATGCAACCTATGATTATTCTCTGGCAGATCAGGGAAGGAAACCGCTTGTTAAGAAACTCGGATTGGGACATTTTAGTAATGATGATAACTCGGTGAGGAGAAACAGTTCATTGCGAATTCCGCGACCACCTGCAGAGAGAAAGCAACAGCATCAGCAGCAGCAAAAGAAGTTGCTGAAGAACACAAATGCAACTGCTAGCCAAAAGACAAGGGCACTATCGTCATTCAGCGGCGAACAAGGACACAATGGGATGAAGGCGTCACGAGACCGGACACACGAGCTCTCTAACAGACGGGTATTACCGGGACCACCAACTGTGGCCTGCATACCGGTCAAACTAGTATATAGCAGATTACTTGAGAAGATAAATAGACCGCCATCAAAGCCAACTGCGAAAGCCTTTAACGAGAGAAGAAGAGTTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWWP

Protein Analysis

769

Amino Acids

87.38

Weight (kDa)

7.07

Isoelectric Point (pI)

52.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 14 - 94 5.8e-10 PWWP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2020
Acc36I ACCTGC 1 cut(s) 2020
AccB7I CCANNNNNTGG 1 cut(s) 140
AccI GTMKAC 1 cut(s) 1036
AccII CGCG 1 cut(s) 2005
AccIII TCCGGA 1 cut(s) 1188
AclWI GGATC 4 cut(s) 22, 49, 705, 1349
AcoI YGGCCR 2 cut(s) 80, 1282
AcsI RAATTY 2 cut(s) 823, 1998
AcuI CTGAAG 2 cut(s) 663, 2078
AcyI GRCGYC 2 cut(s) 1006, 2141
AdeI CACNNNGTG 1 cut(s) 791
AfaI GTAC 4 cut(s) 191, 1063, 1150, 1392
AfiI CCNNNNNNNGG 9 cut(s) 17, 140, 340, 385, 456, 733, 1365, 1487, 1806
AgeI ACCGGT 1 cut(s) 2212
AgsI TTSAA 3 cut(s) 338, 612, 2306
AhlI ACTAGT 2 cut(s) 373, 2221
AjiI CACGTC 1 cut(s) 129
AjnI CCWGG 3 cut(s) 10, 1393, 1776
AjuI GAANNNNNNNTTGG 6 cut(s) 1479, 1511, 1551, 1583, 1928, 1960
AloI GAACNNNNNNTCC 2 cut(s) 1972, 2004
AluBI AGCT 6 cut(s) 157, 683, 1001, 1411, 1623, 2164
AluI AGCT 6 cut(s) 157, 683, 1001, 1411, 1623, 2164
Alw21I GWGCWC 1 cut(s) 2166
Alw26I GTCTC 2 cut(s) 1654, 2142
AlwI GGATC 4 cut(s) 22, 49, 705, 1349
AlwNI CAGNNNCTG 1 cut(s) 1001
Ama87I CYCGRG 2 cut(s) 161, 1833
Aor13HI TCCGGA 1 cut(s) 1188
AoxI GGCC 6 cut(s) 80, 713, 1282, 1489, 1634, 2202
ApeKI GCWGC 5 cut(s) 1165, 1846, 1849, 2038, 2041
ApoI RAATTY 2 cut(s) 823, 1998
ArsI GACNNNNNNTTYG 2 cut(s) 1692, 1724
AsiGI ACCGGT 1 cut(s) 2212
Asp700I GAANNNNTTC 3 cut(s) 622, 673, 1987
AspS9I GGNCC 5 cut(s) 486, 638, 714, 1634, 2189
AsuC2I CCSGG 4 cut(s) 84, 1834, 1835, 2187
AsuHPI GGTGA 7 cut(s) 67, 163, 512, 881, 1388, 1409, 1987
AsuNHI GCTAGC 1 cut(s) 2078
AvaI CYCGRG 2 cut(s) 161, 1833
AvaII GGWCC 3 cut(s) 486, 638, 2189
BaeGI GKGCMC 1 cut(s) 2098
BalI TGGCCA 1 cut(s) 1284
BanII GRGCYC 1 cut(s) 2166
BauI CACGAG 3 cut(s) 73, 2145, 2159
BbsI GAAGAC 1 cut(s) 1817
Bbv12I GWGCWC 1 cut(s) 2166
BbvI GCAGC 5 cut(s) 1177, 1833, 1861, 2050, 2053
BccI CCATC 5 cut(s) 1241, 1331, 1588, 1712, 2269
BceAI ACGGC 2 cut(s) 1837, 1859
BcgI CGANNNNNNTGC 2 cut(s) 1217, 1251
BciT130I CCWGG 3 cut(s) 12, 1395, 1778
BciVI GTATCC 3 cut(s) 84, 439, 961
BcnI CCSGG 4 cut(s) 84, 1834, 1835, 2187
BcoDI GTCTC 2 cut(s) 1654, 2142
BcuI ACTAGT 2 cut(s) 373, 2221
BfaI CTAG 7 cut(s) 374, 390, 1146, 1241, 1431, 2079, 2222
BfmI CTRYAG 4 cut(s) 429, 1447, 1847, 2013
BfuAI ACCTGC 1 cut(s) 2020
BfuI GTATCC 3 cut(s) 84, 439, 961
BglII AGATCT 2 cut(s) 106, 1205
BisI GCNGC 6 cut(s) 1166, 1847, 1850, 2039, 2042, 2113
BlpI GCTNAGC 1 cut(s) 830
BlsI GCNGC 6 cut(s) 1167, 1848, 1851, 2040, 2043, 2114
Bme1390I CCNGG 7 cut(s) 12, 84, 1395, 1778, 1834, 1835, 2187
Bme18I GGWCC 3 cut(s) 486, 638, 2189
BmeT110I CYCGRG 2 cut(s) 161, 1833
BmgBI CACGTC 1 cut(s) 129
BmgT120I GGNCC 5 cut(s) 486, 638, 714, 1634, 2189
BmiI GGNNCC 3 cut(s) 1723, 1839, 2190
BmrFI CCNGG 7 cut(s) 12, 84, 1395, 1778, 1834, 1835, 2187
BmrI ACTGGG 1 cut(s) 1477
BmsI GCATC 7 cut(s) 163, 307, 397, 1436, 1699, 1873, 2041
BmtI GCTAGC 1 cut(s) 2082
BmuI ACTGGG 1 cut(s) 1477
BoxI GACNNNNGTC 1 cut(s) 1042
BpiI GAAGAC 1 cut(s) 1817
Bpu1102I GCTNAGC 1 cut(s) 830
BpuEI CTTGAG 1 cut(s) 2261
BpuMI CCSGG 4 cut(s) 84, 1834, 1835, 2187
Bsa29I ATCGAT 1 cut(s) 44
BsaBI GATNNNNATC 1 cut(s) 1404
BsaHI GRCGYC 2 cut(s) 1006, 2141
BsaI GGTCTC 1 cut(s) 2142
BsaJI CCNNGG 7 cut(s) 83, 160, 414, 727, 1481, 1833, 1841
BsaWI WCCGGW 5 cut(s) 148, 1188, 1693, 2151, 2212
BsaXI ACNNNNNCTCC 2 cut(s) 1972, 2002
Bsc4I CCNNNNNNNGG 9 cut(s) 17, 140, 340, 385, 456, 733, 1365, 1487, 1806
Bse118I RCCGGY 2 cut(s) 863, 2212
Bse1I ACTGG 4 cut(s) 345, 690, 1166, 1472
Bse3DI GCAATG 2 cut(s) 852, 1991
Bse8I GATNNNNATC 1 cut(s) 1404
BseAI TCCGGA 1 cut(s) 1188
BseBI CCWGG 3 cut(s) 12, 1395, 1778
BseCI ATCGAT 1 cut(s) 44
BseDI CCNNGG 7 cut(s) 83, 160, 414, 727, 1481, 1833, 1841
BseGI GGATG 6 cut(s) 559, 1477, 1603, 1690, 1882, 2139
BseJI GATNNNNATC 1 cut(s) 1404
BseLI CCNNNNNNNGG 9 cut(s) 17, 140, 340, 385, 456, 733, 1365, 1487, 1806
BseMI GCAATG 2 cut(s) 852, 1991
BseMII CTCAG 1 cut(s) 509
BseNI ACTGG 4 cut(s) 345, 690, 1166, 1472
BseRI GAGGAG 5 cut(s) 73, 76, 149, 977, 1993
BseSI GKGCMC 1 cut(s) 2098
BseXI GCAGC 5 cut(s) 1177, 1833, 1861, 2050, 2053
BseYI CCCAGC 1 cut(s) 1001
BsgI GTGCAG 1 cut(s) 1194
Bsh1236I CGCG 1 cut(s) 2005
Bsh1285I CGRYCG 1 cut(s) 1698
BshFI GGCC 6 cut(s) 82, 715, 1284, 1491, 1636, 2204
BshTI ACCGGT 1 cut(s) 2212
BshVI ATCGAT 1 cut(s) 44
BsiEI CGRYCG 1 cut(s) 1698
BsiHKAI GWGCWC 1 cut(s) 2166
BsiHKCI CYCGRG 2 cut(s) 161, 1833
BslFI GGGAC 6 cut(s) 362, 472, 854, 1625, 1962, 2202
BslI CCNNNNNNNGG 9 cut(s) 17, 140, 340, 385, 456, 733, 1365, 1487, 1806
BsmAI GTCTC 2 cut(s) 1654, 2142
BsmFI GGGAC 6 cut(s) 362, 472, 854, 1625, 1962, 2202
BsmI GAATGC 2 cut(s) 251, 850
BsnI GGCC 6 cut(s) 82, 715, 1284, 1491, 1636, 2204
Bso31I GGTCTC 1 cut(s) 2142
BsoBI CYCGRG 2 cut(s) 161, 1833
Bsp1286I GDGCHC 2 cut(s) 2098, 2166
Bsp13I TCCGGA 1 cut(s) 1188
Bsp1720I GCTNAGC 1 cut(s) 830
BspANI GGCC 6 cut(s) 82, 715, 1284, 1491, 1636, 2204
BspCNI CTCAG 1 cut(s) 510
BspDI ATCGAT 1 cut(s) 44
BspEI TCCGGA 1 cut(s) 1188
BspFNI CGCG 1 cut(s) 2005
BspLI GGNNCC 3 cut(s) 1723, 1839, 2190
BspMAI CTGCAG 2 cut(s) 1851, 2017
BspMI ACCTGC 1 cut(s) 2020
BspOI GCTAGC 1 cut(s) 2082
BspPI GGATC 4 cut(s) 22, 49, 705, 1349
BspTNI GGTCTC 1 cut(s) 2142
BsrDI GCAATG 2 cut(s) 852, 1991
BsrFI RCCGGY 2 cut(s) 863, 2212
BsrI ACTGG 4 cut(s) 345, 690, 1166, 1472
BssAI RCCGGY 2 cut(s) 863, 2212
BssECI CCNNGG 7 cut(s) 83, 160, 414, 727, 1481, 1833, 1841
BssNI GRCGYC 2 cut(s) 1006, 2141
BssSI CACGAG 3 cut(s) 73, 2145, 2159
BssT1I CCWWGG 2 cut(s) 414, 1481
Bst2BI CACGAG 3 cut(s) 73, 2145, 2159
Bst2UI CCWGG 3 cut(s) 12, 1395, 1778
Bst4CI ACNGT 5 cut(s) 37, 1153, 1232, 1988, 2200
Bst6I CTCTTC 5 cut(s) 613, 1114, 1200, 1211, 2293
BstACI GRCGYC 2 cut(s) 1006, 2141
BstC8I GCNNGC 4 cut(s) 273, 581, 2080, 2206
BstDEI CTNAG 6 cut(s) 482, 518, 596, 744, 830, 1711
BstDSI CCRYGG 1 cut(s) 1841
BstENI CCTNNNNNAGG 2 cut(s) 731, 1485
BstF5I GGATG 6 cut(s) 559, 1477, 1603, 1690, 1882, 2139
BstFNI CGCG 1 cut(s) 2005
BstMAI GTCTC 2 cut(s) 1654, 2142
BstMCI CGRYCG 1 cut(s) 1698
BstMWI GCNNNNNNNGC 4 cut(s) 217, 2002, 2038, 2266
BstNI CCWGG 3 cut(s) 12, 1395, 1778
BstPAI GACNNNNGTC 1 cut(s) 1042
BstSCI CCNGG 7 cut(s) 10, 82, 1393, 1776, 1832, 1833, 2185
BstSFI CTRYAG 4 cut(s) 429, 1447, 1847, 2013
BstSLI GKGCMC 1 cut(s) 2098
BstUI CGCG 1 cut(s) 2005
BstV1I GCAGC 5 cut(s) 1177, 1833, 1861, 2050, 2053
BstV2I GAAGAC 1 cut(s) 1817
BstX2I RGATCY 2 cut(s) 106, 1205
BstYI RGATCY 2 cut(s) 106, 1205
Bsu15I ATCGAT 1 cut(s) 44
BsuI GTATCC 3 cut(s) 84, 439, 961
BsuRI GGCC 6 cut(s) 82, 715, 1284, 1491, 1636, 2204
BsuTUI ATCGAT 1 cut(s) 44
BtgI CCRYGG 1 cut(s) 1841
BtgZI GCGATG 2 cut(s) 290, 1350
BtrI CACGTC 1 cut(s) 129
BtsCI GGATG 6 cut(s) 559, 1477, 1603, 1690, 1882, 2139
BtsI GCAGTG 1 cut(s) 1075
BtsIMutI CAGTG 3 cut(s) 697, 1075, 1350
BveI ACCTGC 1 cut(s) 2020
Cac8I GCNNGC 4 cut(s) 273, 581, 2080, 2206
CaiI CAGNNNCTG 1 cut(s) 1001
Cfr10I RCCGGY 2 cut(s) 863, 2212
Cfr13I GGNCC 5 cut(s) 486, 638, 714, 1634, 2189
Cfr9I CCCGGG 1 cut(s) 1833
ClaI ATCGAT 1 cut(s) 44
CseI GACGC 4 cut(s) 851, 995, 1029, 2130
CsiI ACCWGGT 1 cut(s) 1393
Csp6I GTAC 4 cut(s) 190, 1062, 1149, 1391
CspAI ACCGGT 1 cut(s) 2212
CviAII CATG 6 cut(s) 329, 494, 627, 706, 818, 1454
CviQI GTAC 4 cut(s) 190, 1062, 1149, 1391
DdeI CTNAG 6 cut(s) 482, 518, 596, 744, 830, 1711
DraIII CACNNNGTG 1 cut(s) 791
EaeI YGGCCR 2 cut(s) 80, 1282
Eam1104I CTCTTC 5 cut(s) 613, 1114, 1200, 1211, 2293
EarI CTCTTC 5 cut(s) 613, 1114, 1200, 1211, 2293
EciI GGCGGA 2 cut(s) 770, 1837
Ecl136II GAGCTC 1 cut(s) 2164
Eco130I CCWWGG 2 cut(s) 414, 1481
Eco24I GRGCYC 1 cut(s) 2166
Eco31I GGTCTC 1 cut(s) 2142
Eco47I GGWCC 3 cut(s) 486, 638, 2189
Eco53kI GAGCTC 1 cut(s) 2164
Eco57I CTGAAG 2 cut(s) 663, 2078
Eco88I CYCGRG 2 cut(s) 161, 1833
EcoICRI GAGCTC 1 cut(s) 2164
EcoNI CCTNNNNNAGG 2 cut(s) 731, 1485
EcoO109I RGGNCCY 1 cut(s) 1634
EcoRI GAATTC 1 cut(s) 1998
EcoRII CCWGG 3 cut(s) 10, 1393, 1776
EcoT14I CCWWGG 2 cut(s) 414, 1481
EcoT22I ATGCAT 3 cut(s) 251, 513, 852
EcoT38I GRGCYC 1 cut(s) 2166
ErhI CCWWGG 2 cut(s) 414, 1481
FaeI CATG 6 cut(s) 332, 497, 630, 709, 821, 1457
FalI AAGNNNNNCTT 4 cut(s) 93, 125, 661, 693
FaqI GGGAC 6 cut(s) 362, 472, 854, 1625, 1962, 2202
FatI CATG 6 cut(s) 328, 493, 626, 705, 817, 1453
FauI CCCGC 1 cut(s) 204
FblI GTMKAC 1 cut(s) 1036
Fnu4HI GCNGC 6 cut(s) 1166, 1847, 1850, 2039, 2042, 2113
FokI GGATG 6 cut(s) 566, 1484, 1610, 1677, 1889, 2146
FriOI GRGCYC 1 cut(s) 2166
Fsp4HI GCNGC 6 cut(s) 1166, 1847, 1850, 2039, 2042, 2113
FspBI CTAG 7 cut(s) 374, 390, 1146, 1241, 1431, 2079, 2222
GluI GCNGC 6 cut(s) 1166, 1847, 1850, 2039, 2042, 2113
GsaI CCCAGC 1 cut(s) 1005
HaeIII GGCC 6 cut(s) 82, 715, 1284, 1491, 1636, 2204
HgaI GACGC 4 cut(s) 851, 995, 1029, 2130
Hin1I GRCGYC 2 cut(s) 1006, 2141
Hin1II CATG 6 cut(s) 332, 497, 630, 709, 821, 1457
HphI GGTGA 7 cut(s) 67, 163, 512, 881, 1388, 1409, 1987
Hpy166II GTNNAC 2 cut(s) 783, 1037
Hpy8I GTNNAC 2 cut(s) 783, 1037
Hpy99I CGWCG 2 cut(s) 133, 1023
HpyAV CCTTC 6 cut(s) 359, 1266, 1481, 1523, 1911, 2131
HpyCH4III ACNGT 5 cut(s) 37, 1153, 1232, 1988, 2200
HpyCH4IV ACGT 3 cut(s) 128, 1043, 1580
HpyF10VI GCNNNNNNNGC 4 cut(s) 217, 2002, 2038, 2266
HpyF3I CTNAG 6 cut(s) 482, 518, 596, 744, 830, 1711
HpySE526I ACGT 3 cut(s) 128, 1043, 1580
Hsp92I GRCGYC 2 cut(s) 1006, 2141
Hsp92II CATG 6 cut(s) 332, 497, 630, 709, 821, 1457
Kpn2I TCCGGA 1 cut(s) 1188
LmnI GCTCC 2 cut(s) 162, 998
Lsp1109I GCAGC 5 cut(s) 1177, 1833, 1861, 2050, 2053
LweI GCATC 7 cut(s) 163, 307, 397, 1436, 1699, 1873, 2041
MabI ACCWGGT 1 cut(s) 1393
MaeI CTAG 7 cut(s) 374, 390, 1146, 1241, 1431, 2079, 2222
MaeII ACGT 3 cut(s) 128, 1043, 1580
MaeIII GTNAC 2 cut(s) 1376, 2142
MfeI CAATTG 2 cut(s) 1644, 1746
MflI RGATCY 2 cut(s) 106, 1205
MhlI GDGCHC 2 cut(s) 2098, 2166
MlsI TGGCCA 1 cut(s) 1284
MluCI AATT 9 cut(s) 193, 673, 823, 901, 1223, 1644, 1746, 1828, 1998
MluNI TGGCCA 1 cut(s) 1284
MlyI GAGTC 6 cut(s) 107, 392, 1097, 1100, 1186, 1739
MmeI TCCRAC 1 cut(s) 1182
Mox20I TGGCCA 1 cut(s) 1284
Mph1103I ATGCAT 3 cut(s) 251, 513, 852
MroI TCCGGA 1 cut(s) 1188
MroXI GAANNNNTTC 3 cut(s) 622, 673, 1987
MscI TGGCCA 1 cut(s) 1284
MseI TTAA 5 cut(s) 654, 1314, 1667, 1932, 2286
MslI CAYNNNNRTG 3 cut(s) 226, 498, 1432
Msp20I TGGCCA 1 cut(s) 1284
MspA1I CMGCKG 1 cut(s) 2112
MspR9I CCNGG 7 cut(s) 12, 84, 1395, 1778, 1834, 1835, 2187
MunI CAATTG 2 cut(s) 1644, 1746
Mva1269I GAATGC 2 cut(s) 251, 850
MvaI CCWGG 3 cut(s) 12, 1395, 1778
MvnI CGCG 1 cut(s) 2005
MwoI GCNNNNNNNGC 4 cut(s) 217, 2002, 2038, 2266
NciI CCSGG 4 cut(s) 84, 1834, 1835, 2187
NheI GCTAGC 1 cut(s) 2078
NlaIII CATG 6 cut(s) 332, 497, 630, 709, 821, 1457
NlaIV GGNNCC 3 cut(s) 1723, 1839, 2190
NmuCI GTSAC 2 cut(s) 1376, 2142
NsiI ATGCAT 3 cut(s) 251, 513, 852
PaqCI CACCTGC 1 cut(s) 2020
PcsI WCGNNNNNNNCGW 1 cut(s) 125
PctI GAATGC 2 cut(s) 251, 850
PdmI GAANNNNTTC 3 cut(s) 622, 673, 1987
PfeI GAWTC 6 cut(s) 263, 467, 794, 920, 935, 947
PflMI CCANNNNNTGG 1 cut(s) 140
PfoI TCCNGGA 1 cut(s) 10
PinAI ACCGGT 1 cut(s) 2212
PkrI GCNGC 6 cut(s) 1167, 1848, 1851, 2040, 2043, 2114
PleI GAGTC 6 cut(s) 107, 392, 1096, 1100, 1186, 1738
PpsI GAGTC 6 cut(s) 107, 392, 1096, 1100, 1186, 1738
PshAI GACNNNNGTC 1 cut(s) 1042
Psp124BI GAGCTC 1 cut(s) 2166
Psp6I CCWGG 3 cut(s) 10, 1393, 1776
PspFI CCCAGC 1 cut(s) 1001
PspGI CCWGG 3 cut(s) 10, 1393, 1776
PspN4I GGNNCC 3 cut(s) 1723, 1839, 2190
PspPI GGNCC 5 cut(s) 486, 638, 714, 1634, 2189
PstI CTGCAG 2 cut(s) 1851, 2017
PstNI CAGNNNCTG 1 cut(s) 1001
PsuI RGATCY 2 cut(s) 106, 1205
RsaI GTAC 4 cut(s) 191, 1063, 1150, 1392
RsaNI GTAC 4 cut(s) 190, 1062, 1149, 1391
RseI CAYNNNNRTG 3 cut(s) 226, 498, 1432
SacI GAGCTC 1 cut(s) 2166
SaqAI TTAA 5 cut(s) 654, 1314, 1667, 1932, 2286
SatI GCNGC 6 cut(s) 1166, 1847, 1850, 2039, 2042, 2113
Sau96I GGNCC 5 cut(s) 486, 638, 714, 1634, 2189
SchI GAGTC 6 cut(s) 107, 392, 1097, 1100, 1186, 1739
ScrFI CCNGG 7 cut(s) 12, 84, 1395, 1778, 1834, 1835, 2187
SduI GDGCHC 2 cut(s) 2098, 2166
SexAI ACCWGGT 1 cut(s) 1393
SfaNI GCATC 7 cut(s) 163, 307, 397, 1436, 1699, 1873, 2041
SfcI CTRYAG 4 cut(s) 429, 1447, 1847, 2013
SinI GGWCC 3 cut(s) 486, 638, 2189
SmaI CCCGGG 1 cut(s) 1835
SmiMI CAYNNNNRTG 3 cut(s) 226, 498, 1432
SmlI CTYRAG 1 cut(s) 2240
SmoI CTYRAG 1 cut(s) 2240
SpeI ACTAGT 2 cut(s) 373, 2221
Sse9I AATT 9 cut(s) 193, 673, 823, 901, 1223, 1644, 1746, 1828, 1998
SspMI CTAG 7 cut(s) 374, 390, 1146, 1241, 1431, 2079, 2222
SstI GAGCTC 1 cut(s) 2166
StyD4I CCNGG 7 cut(s) 10, 82, 1393, 1776, 1832, 1833, 2185
StyI CCWWGG 2 cut(s) 414, 1481
TaaI ACNGT 5 cut(s) 37, 1153, 1232, 1988, 2200
TaiI ACGT 3 cut(s) 131, 1046, 1583
TaqI TCGA 5 cut(s) 44, 568, 1527, 1698, 1704
TasI AATT 9 cut(s) 193, 673, 823, 901, 1223, 1644, 1746, 1828, 1998
TatI WGTACW 1 cut(s) 1061
TauI GCSGC 1 cut(s) 2115
TfiI GAWTC 6 cut(s) 263, 467, 794, 920, 935, 947
Tru1I TTAA 5 cut(s) 654, 1314, 1667, 1932, 2286
Tru9I TTAA 5 cut(s) 654, 1314, 1667, 1932, 2286
TscAI CASTG 3 cut(s) 697, 1075, 1357
TseFI GTSAC 2 cut(s) 1376, 2142
TseI GCWGC 5 cut(s) 1165, 1846, 1849, 2038, 2041
Tsp45I GTSAC 2 cut(s) 1376, 2142
TspDTI ATGAA 8 cut(s) 258, 615, 1071, 1517, 1578, 1779, 1980, 2150
TspGWI ACGGA 2 cut(s) 1228, 1855
TspMI CCCGGG 1 cut(s) 1833
TspRI CASTG 3 cut(s) 697, 1075, 1357
Van91I CCANNNNNTGG 1 cut(s) 140
VpaK11BI GGWCC 3 cut(s) 486, 638, 2189
XagI CCTNNNNNAGG 2 cut(s) 731, 1485
XapI RAATTY 2 cut(s) 823, 1998
XbaI TCTAGA 2 cut(s) 1240, 1430
XcmI CCANNNNNNNNNTGG 1 cut(s) 421
XmaI CCCGGG 1 cut(s) 1833
XmiI GTMKAC 1 cut(s) 1036
XmnI GAANNNNTTC 3 cut(s) 622, 673, 1987
XspI CTAG 7 cut(s) 374, 390, 1146, 1241, 1431, 2079, 2222
Zsp2I ATGCAT 3 cut(s) 251, 513, 852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.