MD07G1305900.v1.1

PWWP domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0006536
Physical Location & Seq
Reverse (-)
36262435 .. 36266886
4452 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1305900.v1.1.491

Sequence Viewer

Length: 2382 bp
ATGTGTATTATGGGTAGTGCGGATTCAGGTGCGGGGGATTTCAGCGTAGGATCGATCGTCTGGGTGAGGCGGAGGAACGGGTCCTGGTGGCCGGGGAAGATAGTGGGCCCGGAAGAGCTCTCTACTTCGCATCTCACGTCGCCTCGCTCTGGGACCCCCGTCAAGCTTCTCGGCAGAGAAGATGCCAGTGTTGACTGGTACAATCTGGAAAAATCCAAGCGTGTTAAGGCATTTCGATGCGGTGAGTTTGATGATTGTATTGAGAAGGCTGAATCAGCGCAGGGTATGCCTATAAAGAAAAGGGAGAAATATGCACGTCGAGAAGATGCTATTCTTCATGCGCTTGAGCTTGAGAAGCAGTTATTGAAGAAACAAGGAAAGTTAGGTATAACTTCTGAACGCTTGAACAATAGATTATCTGGTGCTGTGAAAAAGGCGTTAGTTATTTCTTCCGGGAGCTTGGGAATTGACAATGTAAAACTTGAAAATTCCAAATCACCTATGTCTCATAGAAATGACATTATAGGCAGTCCTATGTCTTCCGAAAGAGTCGAAGAGGGAAATCAACTAAGTGGTGATGATGATCATTCTGAAGTCGTGCCTCGGATGAGAGGCTTGCAAGACTTTGGTCTCAAAATTGCCCCTTCGAAGCGAAAAATATCTTCTCTTGCTTTAAACGGTTCTTTGAAACCCACACTTAATGGTAATGTTCAAGCTCTTAGTCGTGGTGGTCTTAGCATGGGAGGAACAAGTCATGTGAATGGTAAACATTCTTTAGAGCAAAGGAAAAGGTCACATGATGGATTAAGTGATGAAATTTTGGTCAAGAGACCTGATAAACGTCGTCCTCTTGTTCAAGTTTTGCAGAATATTGCAAAATTAGCAGTCCCACAGTCCTTGCAACCTGACAGTACTACTCTTTCTACTTCTGTTTCAGGAGTGGAGCCGACAGGAGTTATTTACAAGGCAAAGAGGAGTAAAATTGTATATTTGCCAGCTGAGTCTGGTGAATCCTTGGGGTACGAAGCATCTCCTTCAAACCATGTAGAGATCTCAGCTTCCCCAGTTGGTGCTCGTCCTCATGCTGAGTCCATGATTTCAGAGAACACTTCTGGTTTTACAGAGGATGACTCTGATTCTTCTGAAACTGATACTTCTGAGTCCGAGTCGGATTCATCTGAGACAGAACCAGATATGGATGAAGACATGCCTTTACTTTCAGAACCAGAAGTGGGAAGATATGAAGCACAAGAACACAGAATCATGGTTGGTGAGGAGCCTGATGAATTATCTCATTCTGGTGATATGGCTCACCTATATAGTCATGACTCTCTATTTGCTAGTGGAGCTGTGTCCAAATGGCAGCTGAAAGGGAAAAGGAATATCCGCAATCTTACAAAAAAGTCTATGGATGCCACTTACGGAAAAGGCTATAATTATGGACCATATCCTGAAGAAAAGACTGAGTTTGGACTGGAAGATGAATACTCGATGGCATCAAGGGCTGCAGCAAGACGTCGAAACAGTGTTGGTCAGCATATGATTGATTGGGAGGACTGGACCTGGGAGGATAGGTCTGCTTGGAACGAATACTGGGACATCAAAAGAGAGCGCTTTCACCCGGTATATGATGGCCGTCATCATTATCGCAGGAGGCCAAAATACTTGATAGATGTTGACTTGAAGGTCCAGGCAAGTTACCAAAAGGAGCCTGTTCCAATTGTTTCTCTGATGAGCAAGTTAAATGGGAAGGCAATAATAGGGCACCCAATCCAAATTGAAGCCTTAGAAGATGGTTCATCCAACTCGCTTCTTTCAACAGTTGATGAATTTGGTGAAGAAGCAATTGACAATAATGGGGTTGCAACCCTTCCACACGCATGGAGGACGGCAAGGAGGACGGCAAATGTTCGAGTCCCACGCCCTCATTTATCATCTGCATTGGATGGTGATGAAACTGCTGACTACCCTCCCTTTTCAGATGAAGAAAGCAGACCACCATTTAAGAAACTAAATATAGGGAGTTTCAGTAACAATGCAAGCCAGGGCAAAAGGAGCCTTCCTAACAACTCTCGGCTTCCCACTGATAGAAAGTTCTCAAAAAAGGCGGGCAAGAAAGTGATCTTATCGTCAAGCCAGAAAACGAGGACCATATCTTCAATACCCGTTGAACAGAAATTTAGTAACAAGCGAATGCATCATGATAGCAGTAGTTATCAAAGGGGAGGGCTGATCAAACCGGAGTCTTCTGGGGCTGCTACTACTGTAGCTTGCATACCGGTGAAATTAGTATTCAGTAGATTACTTGAGAAGATCAATAGGCCGCCATCAAAAGCAGTTAGTACGGTTTTATTGAATAGCGAAAAGGAGAGAAATTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWWP

Protein Analysis

794

Amino Acids

87.83

Weight (kDa)

8.47

Isoelectric Point (pI)

55.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 17 - 97 2.6e-10 PWWP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1685
AatII GACGTC 1 cut(s) 1519
AccB1I GGYRCC 1 cut(s) 1764
AciI CCGC 7 cut(s) 20, 32, 70, 240, 1387, 2108, 2324
AclWI GGATC 1 cut(s) 58
AcoI YGGCCR 2 cut(s) 89, 1633
AcsI RAATTY 5 cut(s) 487, 816, 1829, 2177, 2374
AcuI CTGAAG 2 cut(s) 612, 1473
AcyI GRCGYC 1 cut(s) 1516
AfaI GTAC 4 cut(s) 200, 913, 1022, 2344
AfeI AGCGCT 1 cut(s) 1613
AfiI CCNNNNNNNGG 2 cut(s) 149, 1232
AgeI ACCGGT 1 cut(s) 2278
AjiI CACGTC 2 cut(s) 138, 317
AjnI CCWGG 4 cut(s) 83, 1562, 1689, 2043
Alw21I GWGCWC 2 cut(s) 120, 1075
Alw26I GTCTC 4 cut(s) 510, 635, 823, 1175
AlwI GGATC 1 cut(s) 58
Aor51HI AGCGCT 1 cut(s) 1613
AoxI GGCC 5 cut(s) 89, 106, 1633, 1655, 2321
ApaI GGGCCC 1 cut(s) 110
ApeKI GCWGC 4 cut(s) 1363, 1505, 1508, 2255
ApoI RAATTY 5 cut(s) 487, 816, 1829, 2177, 2374
ArsI GACNNNNNNTTYG 2 cut(s) 1319, 1351
AsiGI ACCGGT 1 cut(s) 2278
AspLEI GCGC 3 cut(s) 280, 343, 1614
AspS9I GGNCC 8 cut(s) 81, 106, 107, 153, 1442, 1560, 1687, 2148
AsuC2I CCSGG 4 cut(s) 93, 110, 454, 1622
AsuII TTCGAA 1 cut(s) 647
AvaII GGWCC 6 cut(s) 81, 153, 1442, 1560, 1687, 2148
BaeGI GKGCMC 2 cut(s) 110, 1767
BanI GGYRCC 1 cut(s) 1764
BanII GRGCYC 2 cut(s) 110, 120
BbsI GAAGAC 3 cut(s) 531, 1209, 2238
Bbv12I GWGCWC 2 cut(s) 120, 1075
BbvI GCAGC 4 cut(s) 1375, 1492, 1520, 2242
BccI CCATC 6 cut(s) 794, 1486, 1625, 1787, 1940, 2335
BceAI ACGGC 3 cut(s) 1620, 1905, 1917
BciT130I CCWGG 4 cut(s) 85, 1564, 1691, 2045
BclI TGATCA 2 cut(s) 583, 2232
BcnI CCSGG 4 cut(s) 93, 110, 454, 1622
BcoDI GTCTC 4 cut(s) 510, 635, 823, 1175
BfaI CTAG 1 cut(s) 1341
BfmI CTRYAG 2 cut(s) 1506, 2265
BfoI RGCGCY 1 cut(s) 1615
BglII AGATCT 1 cut(s) 1050
BisI GCNGC 5 cut(s) 1364, 1506, 1509, 2256, 2324
BlsI GCNGC 5 cut(s) 1365, 1507, 1510, 2257, 2325
BmcAI AGTACT 1 cut(s) 913
Bme1390I CCNGG 8 cut(s) 85, 93, 110, 454, 1564, 1622, 1691, 2045
Bme18I GGWCC 6 cut(s) 81, 153, 1442, 1560, 1687, 2148
BmgBI CACGTC 2 cut(s) 138, 317
BmgT120I GGNCC 8 cut(s) 81, 106, 107, 153, 1442, 1560, 1687, 2148
BmiI GGNNCC 9 cut(s) 82, 108, 154, 155, 945, 1278, 1710, 1766, 2057
BmrFI CCNGG 8 cut(s) 85, 93, 110, 454, 1564, 1622, 1691, 2045
BmrI ACTGGG 2 cut(s) 1058, 1603
BmsI GCATC 8 cut(s) 139, 172, 227, 316, 1037, 1402, 1505, 2206
BmuI ACTGGG 2 cut(s) 1058, 1603
BoxI GACNNNNGTC 2 cut(s) 158, 627
BpiI GAAGAC 3 cut(s) 531, 1209, 2238
BplI GAGNNNNNCTC 2 cut(s) 1115, 1147
Bpu14I TTCGAA 1 cut(s) 647
BpuEI CTTGAG 3 cut(s) 365, 371, 2327
BpuMI CCSGG 4 cut(s) 93, 110, 454, 1622
Bsa29I ATCGAT 1 cut(s) 53
BsaBI GATNNNNATC 1 cut(s) 582
BsaHI GRCGYC 1 cut(s) 1516
BsaI GGTCTC 2 cut(s) 635, 823
BsaJI CCNNGG 5 cut(s) 92, 602, 1014, 1563, 2044
BsaWI WCCGGW 2 cut(s) 2239, 2278
BsaXI ACNNNNNCTCC 4 cut(s) 1559, 1589, 2014, 2044
Bsc4I CCNNNNNNNGG 2 cut(s) 149, 1232
Bse118I RCCGGY 1 cut(s) 2278
Bse1I ACTGG 6 cut(s) 186, 200, 1064, 1479, 1562, 1598
Bse8I GATNNNNATC 1 cut(s) 582
BseBI CCWGG 4 cut(s) 85, 1564, 1691, 2045
BseCI ATCGAT 1 cut(s) 53
BseDI CCNNGG 5 cut(s) 92, 602, 1014, 1563, 2044
BseGI GGATG 6 cut(s) 612, 1132, 1204, 1417, 1799, 1951
BseJI GATNNNNATC 1 cut(s) 582
BseLI CCNNNNNNNGG 2 cut(s) 149, 1232
BseMII CTCAG 6 cut(s) 990, 1068, 1077, 1149, 1170, 1455
BseNI ACTGG 6 cut(s) 186, 200, 1064, 1479, 1562, 1598
BseRI GAGGAG 2 cut(s) 988, 1289
BseSI GKGCMC 2 cut(s) 110, 1767
BseXI GCAGC 4 cut(s) 1375, 1492, 1520, 2242
Bsh1285I CGRYCG 1 cut(s) 57
BshFI GGCC 5 cut(s) 91, 108, 1635, 1657, 2323
BshNI GGYRCC 1 cut(s) 1764
BshTI ACCGGT 1 cut(s) 2278
BshVI ATCGAT 1 cut(s) 53
BsiEI CGRYCG 1 cut(s) 57
BsiHKAI GWGCWC 2 cut(s) 120, 1075
BsiSI CCGG 6 cut(s) 92, 110, 453, 1622, 2240, 2279
BslFI GGGAC 4 cut(s) 166, 872, 1610, 1901
BslI CCNNNNNNNGG 2 cut(s) 149, 1232
BsmAI GTCTC 4 cut(s) 510, 635, 823, 1175
BsmFI GGGAC 4 cut(s) 166, 872, 1610, 1901
BsmI GAATGC 1 cut(s) 2199
BsnI GGCC 5 cut(s) 91, 108, 1635, 1657, 2323
Bso31I GGTCTC 2 cut(s) 635, 823
Bsp119I TTCGAA 1 cut(s) 647
Bsp120I GGGCCC 1 cut(s) 106
Bsp1286I GDGCHC 4 cut(s) 110, 120, 1075, 1767
Bsp143I GATC 7 cut(s) 50, 54, 583, 1050, 2121, 2232, 2313
BspACI CCGC 7 cut(s) 20, 32, 70, 240, 1387, 2108, 2324
BspANI GGCC 5 cut(s) 91, 108, 1635, 1657, 2323
BspCNI CTCAG 6 cut(s) 991, 1067, 1078, 1150, 1171, 1456
BspDI ATCGAT 1 cut(s) 53
BspHI TCATGA 3 cut(s) 1324, 2200, 2378
BspLI GGNNCC 9 cut(s) 82, 108, 154, 155, 945, 1278, 1710, 1766, 2057
BspMAI CTGCAG 1 cut(s) 1510
BspPI GGATC 1 cut(s) 58
BspQI GCTCTTC 1 cut(s) 108
BspT104I TTCGAA 1 cut(s) 647
BspT107I GGYRCC 1 cut(s) 1764
BspTNI GGTCTC 2 cut(s) 635, 823
BsrFI RCCGGY 1 cut(s) 2278
BsrI ACTGG 6 cut(s) 186, 200, 1064, 1479, 1562, 1598
BssAI RCCGGY 1 cut(s) 2278
BssECI CCNNGG 5 cut(s) 92, 602, 1014, 1563, 2044
BssMI GATC 7 cut(s) 50, 54, 583, 1050, 2121, 2232, 2313
BssNI GRCGYC 1 cut(s) 1516
BssT1I CCWWGG 1 cut(s) 1014
Bst2UI CCWGG 4 cut(s) 85, 1564, 1691, 2045
Bst4CI ACNGT 7 cut(s) 680, 894, 911, 1526, 1822, 2266, 2347
Bst6I CTCTTC 2 cut(s) 108, 549
BstACI GRCGYC 1 cut(s) 1516
BstAPI GCANNNNNTGC 1 cut(s) 286
BstBI TTCGAA 1 cut(s) 647
BstC8I GCNNGC 5 cut(s) 617, 996, 2041, 2110, 2272
BstF5I GGATG 6 cut(s) 612, 1132, 1204, 1417, 1799, 1951
BstH2I RGCGCY 1 cut(s) 1615
BstHHI GCGC 3 cut(s) 280, 343, 1614
BstKTI GATC 7 cut(s) 53, 57, 586, 1053, 2124, 2235, 2316
BstMAI GTCTC 4 cut(s) 510, 635, 823, 1175
BstMBI GATC 7 cut(s) 50, 54, 583, 1050, 2121, 2232, 2313
BstMCI CGRYCG 1 cut(s) 57
BstMWI GCNNNNNNNGC 7 cut(s) 275, 286, 355, 881, 1346, 1502, 2055
BstNI CCWGG 4 cut(s) 85, 1564, 1691, 2045
BstNSI RCATGY 1 cut(s) 1210
BstPAI GACNNNNGTC 2 cut(s) 158, 627
BstSCI CCNGG 8 cut(s) 83, 91, 108, 452, 1562, 1620, 1689, 2043
BstSFI CTRYAG 2 cut(s) 1506, 2265
BstSLI GKGCMC 2 cut(s) 110, 1767
BstV1I GCAGC 4 cut(s) 1375, 1492, 1520, 2242
BstV2I GAAGAC 3 cut(s) 531, 1209, 2238
BstX2I RGATCY 1 cut(s) 1050
BstXI CCANNNNNNTGG 1 cut(s) 1881
BstYI RGATCY 1 cut(s) 1050
Bsu15I ATCGAT 1 cut(s) 53
BsuRI GGCC 5 cut(s) 91, 108, 1635, 1657, 2323
BsuTUI ATCGAT 1 cut(s) 53
BtrI CACGTC 2 cut(s) 138, 317
BtsCI GGATG 6 cut(s) 612, 1132, 1204, 1417, 1799, 1951
BtsIMutI CAGTG 3 cut(s) 193, 1531, 2082
Cac8I GCNNGC 5 cut(s) 617, 996, 2041, 2110, 2272
CciI TCATGA 3 cut(s) 1324, 2200, 2378
CfoI GCGC 3 cut(s) 280, 343, 1614
Cfr10I RCCGGY 1 cut(s) 2278
Cfr13I GGNCC 8 cut(s) 81, 106, 107, 153, 1442, 1560, 1687, 2148
ClaI ATCGAT 1 cut(s) 53
Csp6I GTAC 4 cut(s) 199, 912, 1021, 2343
CspAI ACCGGT 1 cut(s) 2278
CspCI CAANNNNNGTGG 2 cut(s) 879, 914
CviQI GTAC 4 cut(s) 199, 912, 1021, 2343
DpnI GATC 7 cut(s) 52, 56, 585, 1052, 2123, 2234, 2315
DpnII GATC 7 cut(s) 50, 54, 583, 1050, 2121, 2232, 2313
DraI TTTAAA 1 cut(s) 675
DrdI GACNNNNNNGTC 1 cut(s) 1685
DseDI GACNNNNNNGTC 1 cut(s) 1685
EaeI YGGCCR 2 cut(s) 89, 1633
Eam1104I CTCTTC 2 cut(s) 108, 549
EarI CTCTTC 2 cut(s) 108, 549
EciI GGCGGA 1 cut(s) 85
Ecl136II GAGCTC 1 cut(s) 118
Eco130I CCWWGG 1 cut(s) 1014
Eco24I GRGCYC 2 cut(s) 110, 120
Eco31I GGTCTC 2 cut(s) 635, 823
Eco47I GGWCC 6 cut(s) 81, 153, 1442, 1560, 1687, 2148
Eco47III AGCGCT 1 cut(s) 1613
Eco53kI GAGCTC 1 cut(s) 118
Eco57I CTGAAG 2 cut(s) 612, 1473
EcoICRI GAGCTC 1 cut(s) 118
EcoO109I RGGNCCY 2 cut(s) 81, 153
EcoRII CCWGG 4 cut(s) 83, 1562, 1689, 2043
EcoT14I CCWWGG 1 cut(s) 1014
EcoT22I ATGCAT 1 cut(s) 2199
EcoT38I GRGCYC 2 cut(s) 110, 120
ErhI CCWWGG 1 cut(s) 1014
FaqI GGGAC 4 cut(s) 166, 872, 1610, 1901
FauI CCCGC 2 cut(s) 25, 2101
FauNDI CATATG 1 cut(s) 1539
FbaI TGATCA 2 cut(s) 583, 2232
Fnu4HI GCNGC 5 cut(s) 1364, 1506, 1509, 2256, 2324
FokI GGATG 6 cut(s) 619, 1139, 1211, 1424, 1786, 1958
FriOI GRGCYC 2 cut(s) 110, 120
Fsp4HI GCNGC 5 cut(s) 1364, 1506, 1509, 2256, 2324
FspBI CTAG 1 cut(s) 1341
GlaI GCGC 3 cut(s) 279, 342, 1613
GluI GCNGC 5 cut(s) 1364, 1506, 1509, 2256, 2324
HaeII RGCGCY 1 cut(s) 1615
HaeIII GGCC 5 cut(s) 91, 108, 1635, 1657, 2323
HapII CCGG 6 cut(s) 92, 110, 453, 1622, 2240, 2279
HhaI GCGC 3 cut(s) 280, 343, 1614
Hin1I GRCGYC 1 cut(s) 1516
Hin6I GCGC 3 cut(s) 278, 341, 1612
HinP1I GCGC 3 cut(s) 278, 341, 1612
HincII GTYRAC 2 cut(s) 193, 1678
HindII GTYRAC 2 cut(s) 193, 1678
HindIII AAGCTT 1 cut(s) 164
HpaII CCGG 6 cut(s) 92, 110, 453, 1622, 2240, 2279
Hpy166II GTNNAC 3 cut(s) 193, 767, 1678
Hpy188III TCNNGA 8 cut(s) 206, 320, 826, 936, 1325, 1451, 2201, 2379
Hpy8I GTNNAC 3 cut(s) 193, 767, 1678
Hpy99I CGWCG 4 cut(s) 142, 321, 846, 1521
HpyAV CCTTC 7 cut(s) 259, 654, 1044, 1678, 1744, 1880, 2069
HpyCH4III ACNGT 7 cut(s) 680, 894, 911, 1526, 1822, 2266, 2347
HpyCH4IV ACGT 4 cut(s) 137, 316, 841, 1516
HpyF10VI GCNNNNNNNGC 7 cut(s) 275, 286, 355, 881, 1346, 1502, 2055
HpySE526I ACGT 4 cut(s) 137, 316, 841, 1516
Hsp92I GRCGYC 1 cut(s) 1516
HspAI GCGC 3 cut(s) 278, 341, 1612
KflI GGGWCCC 1 cut(s) 153
Ksp22I TGATCA 2 cut(s) 583, 2232
Kzo9I GATC 7 cut(s) 50, 54, 583, 1050, 2121, 2232, 2313
LguI GCTCTTC 1 cut(s) 108
LmnI GCTCC 6 cut(s) 456, 943, 1276, 1346, 1708, 2055
Lsp1109I GCAGC 4 cut(s) 1375, 1492, 1520, 2242
LweI GCATC 8 cut(s) 139, 172, 227, 316, 1037, 1402, 1505, 2206
MaeI CTAG 1 cut(s) 1341
MaeII ACGT 4 cut(s) 137, 316, 841, 1516
MaeIII GTNAC 4 cut(s) 792, 1697, 2030, 2183
MalI GATC 7 cut(s) 52, 56, 585, 1052, 2123, 2234, 2315
MboI GATC 7 cut(s) 50, 54, 583, 1050, 2121, 2232, 2313
MfeI CAATTG 2 cut(s) 1719, 1845
MflI RGATCY 1 cut(s) 1050
MhlI GDGCHC 4 cut(s) 110, 120, 1075, 1767
MlyI GAGTC 9 cut(s) 558, 1010, 1097, 1124, 1169, 1175, 1322, 1923, 2252
MmeI TCCRAC 2 cut(s) 1149, 1827
Mph1103I ATGCAT 1 cut(s) 2199
MseI TTAA 6 cut(s) 225, 674, 699, 806, 1742, 2004
MslI CAYNNNNRTG 6 cut(s) 235, 513, 759, 1299, 1879, 2279
MspA1I CMGCKG 2 cut(s) 998, 1366
MspI CCGG 6 cut(s) 92, 110, 453, 1622, 2240, 2279
MspR9I CCNGG 8 cut(s) 85, 93, 110, 454, 1564, 1622, 1691, 2045
MunI CAATTG 2 cut(s) 1719, 1845
Mva1269I GAATGC 1 cut(s) 2199
MvaI CCWGG 4 cut(s) 85, 1564, 1691, 2045
MwoI GCNNNNNNNGC 7 cut(s) 275, 286, 355, 881, 1346, 1502, 2055
NciI CCSGG 4 cut(s) 93, 110, 454, 1622
NdeI CATATG 1 cut(s) 1539
NdeII GATC 7 cut(s) 50, 54, 583, 1050, 2121, 2232, 2313
NlaIV GGNNCC 9 cut(s) 82, 108, 154, 155, 945, 1278, 1710, 1766, 2057
NmeAIII GCCGAG 2 cut(s) 150, 2053
NmuCI GTSAC 1 cut(s) 792
NsiI ATGCAT 1 cut(s) 2199
NspI RCATGY 1 cut(s) 1210
NspV TTCGAA 1 cut(s) 647
PagI TCATGA 3 cut(s) 1324, 2200, 2378
PciSI GCTCTTC 1 cut(s) 108
PcsI WCGNNNNNNNCGW 1 cut(s) 134
PctI GAATGC 1 cut(s) 2199
PfeI GAWTC 6 cut(s) 23, 272, 1010, 1136, 1172, 1260
PfoI TCCNGGA 1 cut(s) 452
PinAI ACCGGT 1 cut(s) 2278
PkrI GCNGC 5 cut(s) 1365, 1507, 1510, 2257, 2325
Ple19I CGATCG 1 cut(s) 57
PleI GAGTC 9 cut(s) 557, 1009, 1096, 1124, 1168, 1174, 1322, 1922, 2251
PpsI GAGTC 9 cut(s) 557, 1009, 1096, 1124, 1168, 1174, 1322, 1922, 2251
PpuMI RGGWCCY 2 cut(s) 81, 153
PshAI GACNNNNGTC 2 cut(s) 158, 627
Psp124BI GAGCTC 1 cut(s) 120
Psp5II RGGWCCY 2 cut(s) 81, 153
Psp6I CCWGG 4 cut(s) 83, 1562, 1689, 2043
PspGI CCWGG 4 cut(s) 83, 1562, 1689, 2043
PspN4I GGNNCC 9 cut(s) 82, 108, 154, 155, 945, 1278, 1710, 1766, 2057
PspOMI GGGCCC 1 cut(s) 106
PspPI GGNCC 8 cut(s) 81, 106, 107, 153, 1442, 1560, 1687, 2148
PspPPI RGGWCCY 2 cut(s) 81, 153
PstI CTGCAG 1 cut(s) 1510
PsuI RGATCY 1 cut(s) 1050
PvuI CGATCG 1 cut(s) 57
PvuII CAGCTG 2 cut(s) 998, 1366
RsaI GTAC 4 cut(s) 200, 913, 1022, 2344
RsaNI GTAC 4 cut(s) 199, 912, 1021, 2343
RseI CAYNNNNRTG 6 cut(s) 235, 513, 759, 1299, 1879, 2279
SacI GAGCTC 1 cut(s) 120
SapI GCTCTTC 1 cut(s) 108
SaqAI TTAA 6 cut(s) 225, 674, 699, 806, 1742, 2004
SatI GCNGC 5 cut(s) 1364, 1506, 1509, 2256, 2324
Sau3AI GATC 7 cut(s) 50, 54, 583, 1050, 2121, 2232, 2313
Sau96I GGNCC 8 cut(s) 81, 106, 107, 153, 1442, 1560, 1687, 2148
ScaI AGTACT 1 cut(s) 913
SchI GAGTC 9 cut(s) 558, 1010, 1097, 1124, 1169, 1175, 1322, 1923, 2252
ScrFI CCNGG 8 cut(s) 85, 93, 110, 454, 1564, 1622, 1691, 2045
SduI GDGCHC 4 cut(s) 110, 120, 1075, 1767
SfaNI GCATC 8 cut(s) 139, 172, 227, 316, 1037, 1402, 1505, 2206
SfcI CTRYAG 2 cut(s) 1506, 2265
SfuI TTCGAA 1 cut(s) 647
SinI GGWCC 6 cut(s) 81, 153, 1442, 1560, 1687, 2148
SmiMI CAYNNNNRTG 6 cut(s) 235, 513, 759, 1299, 1879, 2279
SmlI CTYRAG 3 cut(s) 344, 350, 2306
SmoI CTYRAG 3 cut(s) 344, 350, 2306
SsiI CCGC 7 cut(s) 20, 32, 70, 240, 1387, 2108, 2324
SspI AATATT 1 cut(s) 871
SspMI CTAG 1 cut(s) 1341
SstI GAGCTC 1 cut(s) 120
StyD4I CCNGG 8 cut(s) 83, 91, 108, 452, 1562, 1620, 1689, 2043
StyI CCWWGG 1 cut(s) 1014
TaaI ACNGT 7 cut(s) 680, 894, 911, 1526, 1822, 2266, 2347
TaiI ACGT 4 cut(s) 140, 319, 844, 1519
TaqI TCGA 8 cut(s) 53, 235, 319, 552, 647, 1490, 1519, 1912
TatI WGTACW 1 cut(s) 911
TauI GCSGC 1 cut(s) 2326
TfiI GAWTC 6 cut(s) 23, 272, 1010, 1136, 1172, 1260
Tru1I TTAA 6 cut(s) 225, 674, 699, 806, 1742, 2004
Tru9I TTAA 6 cut(s) 225, 674, 699, 806, 1742, 2004
TscAI CASTG 3 cut(s) 193, 1531, 2089
TseFI GTSAC 1 cut(s) 792
TseI GCWGC 4 cut(s) 1363, 1505, 1508, 2255
Tsp45I GTSAC 1 cut(s) 792
TspGWI ACGGA 1 cut(s) 1437
TspRI CASTG 3 cut(s) 193, 1531, 2089
VpaK11BI GGWCC 6 cut(s) 81, 153, 1442, 1560, 1687, 2148
XapI RAATTY 5 cut(s) 487, 816, 1829, 2177, 2374
XceI RCATGY 1 cut(s) 1210
XspI CTAG 1 cut(s) 1341
ZraI GACGTC 1 cut(s) 1517
ZrmI AGTACT 1 cut(s) 913
Zsp2I ATGCAT 1 cut(s) 2199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.