RLG00000026090

PWWP domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0006536
Physical Location & Seq
Forward (+)
489228 .. 493281
4054 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026090

Sequence Viewer

Length: 2238 bp
ATGGAGAGTACAGATTCCGGCGATTTCAGCGTCGGATCGATCGTGTGGGTACGGCGGAGGAACGGTTCGTGGTGGCCGGGGAAGATAGTCGGGCCGGAAGAGCTCTCCACTTCGCATCTTACCTCGCCTCGCTCTGGTACCCCAGTCAAGCTTCTCGGTAGAGAAGACGCCAGTGTTGATTGGTACAATCTGGAAAAATCCAAGCGTGTTAAGCCATTTCGATGCGGTGATTTTGATGATTGCATTCACAAGGCTGAATCGGCGCAAGGTATGCCGCCAAAGAAAAGAGAAAAATATGCACGTCGAGAAGATGCTATTCTTCATGCGCTTGAACTTGAGAGGCAACTGTTGAGGAAACAAGGAAAGTCAACTTCTGAATACATGAACAGTAAATATGGTGCTGTGAAGAAGGAGGCAGTTATACCCCCAGAAAGTTTGGGAAAAGACCATTCAAAACTTGGGAATTCCAAATCGCATCAGTTATACAAGCGAAAAGATTCGTTTCATAAGAATGATATTATAGGTAGTCCCCTGTCTTCTCAAAGACTCAAAGAGGGAACCCAATTGAGTGGTGAAGATGATCATTTTGAAGTGACACCTCGAATGAGAGGCTTGCAGGACTTTGGTCTCAAAATTGCCTCTTCAAAGCGAAAACTTTCATCTTCCTCTACCTCAAACGGTTTTTGGAAACCCACAATTGATGGTACTTATCAAGCATTTGCTCATGGTGGCCTCAGCCTGGGAGGAACAAGTCACGTGAACGGAGTGGAGCAGACGGGAGCTATTTGCAGAGCAAAGAGGAGTAAATGTGTATACTTGCCAGCTGACTCTGGTGATTCTTTGGAGTATGAAGCAGCACCTTCAGGCCATATTGAGATATCAGCTTCCCCTGTTGGCACTCGTCTACATGCTGAGAGTTTGATTGAGGACAACACTTCTGGGTTTACAGAAGATCTAGAGGAGTCCAATTCTTCTGAAACTGATTCCTCTGACCATGGATCTGATTCCTCGGAGACTGAACCGGATATGGATGAAGAGATGCCTTCATTTTCAGATCCAGAAGTAGGAAGATATGAAGCACAACATAGAAGCTTGGCTGATGAGGAGCCAGATGAATCAACACATTCTGGCGACATGCCTCACCTCTATAATCAGGACCCTTATTTTGCAAGTGAAGCTGTGTCCAAATGGCAGTTGAAAGGGAAAAGGAATACCCGCAATCTTAGTAAAAGATCAATTGATACAACTGAAGGAAGAGGCTATTTTTATGGACCATATTCTGAAGAAAAGGCTGAGATGAGTGGAATGGACGATGGGTACCCCCTATTAAGAGCTGCATCAAGAAGTCGAAACAGGGTTGGTCTGAATATGATTGATTGGGAGGATGGGACCTGGGAAGACAGGTCTGCGTGGGATGAATGCTGGGACATCAAAAGAGAGCGATTTGACCCGGTATATGATGATCGCTATAATCATCGCAGAAGGCCAAAATACTTGATAGATGTGGACTTGAAAGTCCAGGCAAGTTACCAGAAAGAGCCCGTCCCTATTGTTTCTCTGATGAGCAAGTTAAATGGGAAGGCAATAATAGGGCACCCCATCCAAGTTGAAGCCTTAGAAGATGGTTTATCTAACACGCTTCTTTCAACATTTGATGATTCTTGTGATGAAGCAATTGACAATGATGGGGGTACAACTCTTCCACACGCATGGAGGACTGCAAGGAGGACAGCAAATGTTAGAGTCCCGCGTCCTCATTTATTTTCTACATTGGATGGTGATGAGGCTTCCGATGACCTTCCCTTTTTCGATGAAGGTAGACCACCATTTAAGAAATTAAATATGGGGAGTTCCAGTCACAAGGCAAGCCAGGTCAGGAGGAACCCTCCTCACAACTCCCGGCTTCCCACTGATAGAAAGTTCTCGAAAAAGGTGTCTAAGAAAGTAAGCTTATCATCTAGCCTGAAAACGAAAACGAGGACCTTATCTTCTTTAGCCATTCAACAGAACTATGGTAACAAGGGAATGATACAATATGATAGTGGCCAAAGGGATAGGTTGGCGAAACCAGAGTCTTCTGTATCTGTGCCCACAACTGTAGCTTGCATTCCTGTGAAGTTAGTATTCAGTAGGTTACTCGAGAAGATCAATAGGCCGCCAACAAAAGCAACAGCAGCAGCAGCAGCAGCAGCCAGTAATGCGGTTTTATTGAACGGGGATGTGGAGACAAGTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWWP

Protein Analysis

746

Amino Acids

82.86

Weight (kDa)

6.52

Isoelectric Point (pI)

52.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 12 - 92 8.3e-11 PWWP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1514
Acc65I GGTACC 2 cut(s) 137, 1317
AccB1I GGYRCC 3 cut(s) 137, 1317, 1593
AccI GTMKAC 3 cut(s) 813, 904, 1819
AccII CGCG 1 cut(s) 1750
AciI CCGC 7 cut(s) 55, 225, 275, 1216, 1748, 2156, 2201
AclWI GGATC 3 cut(s) 43, 1006, 1049
AcoI YGGCCR 2 cut(s) 74, 2044
AcsI RAATTY 1 cut(s) 463
AcuI CTGAAG 3 cut(s) 846, 1269, 1302
AcvI CACGTG 1 cut(s) 757
AcyI GRCGYC 1 cut(s) 168
AfaI GTAC 7 cut(s) 10, 51, 139, 185, 706, 1319, 1693
AfiI CCNNNNNNNGG 3 cut(s) 134, 739, 1064
AjiI CACGTC 1 cut(s) 302
AjnI CCWGG 4 cut(s) 738, 1391, 1518, 1869
AloI GAACNNNNNNTCC 2 cut(s) 49, 81
Alw21I GWGCWC 1 cut(s) 105
Alw26I GTCTC 3 cut(s) 632, 1007, 2219
AlwI GGATC 3 cut(s) 43, 1006, 1049
Ama87I CYCGRG 1 cut(s) 2138
AoxI GGCC 7 cut(s) 74, 92, 730, 865, 1484, 2044, 2153
ApeKI GCWGC 8 cut(s) 854, 1334, 2174, 2177, 2180, 2183, 2186, 2189
ApoI RAATTY 1 cut(s) 463
ArsI GACNNNNNNTTYG 6 cut(s) 1148, 1180, 1919, 1951, 2057, 2089
Asp700I GAANNNNTTC 2 cut(s) 496, 655
Asp718I GGTACC 2 cut(s) 137, 1317
AspLEI GCGC 2 cut(s) 265, 328
AspS9I GGNCC 5 cut(s) 92, 1156, 1271, 1389, 1980
AsuC2I CCSGG 3 cut(s) 78, 1451, 1900
AsuHPI GGTGA 5 cut(s) 239, 584, 845, 1133, 1790
AvaI CYCGRG 1 cut(s) 2138
AvaII GGWCC 4 cut(s) 1156, 1271, 1389, 1980
BaeGI GKGCMC 2 cut(s) 1596, 2091
BaeI ACNNNNGTAYC 2 cut(s) 129, 162
BalI TGGCCA 1 cut(s) 2046
BanI GGYRCC 3 cut(s) 137, 1317, 1593
BanII GRGCYC 2 cut(s) 105, 1542
BbrPI CACGTG 1 cut(s) 757
BbsI GAAGAC 4 cut(s) 171, 528, 1404, 2067
Bbv12I GWGCWC 1 cut(s) 105
BbvCI CCTCAGC 1 cut(s) 734
BbvI GCAGC 8 cut(s) 866, 1321, 2186, 2189, 2192, 2195, 2198, 2201
BccI CCATC 7 cut(s) 695, 1307, 1379, 1607, 1616, 1679, 1769
BceAI ACGGC 1 cut(s) 68
BciT130I CCWGG 4 cut(s) 740, 1393, 1520, 1871
BclI TGATCA 1 cut(s) 580
BcnI CCSGG 3 cut(s) 78, 1451, 1900
BcoDI GTCTC 3 cut(s) 632, 1007, 2219
BfaI CTAG 2 cut(s) 956, 1959
BfmI CTRYAG 1 cut(s) 2097
BglII AGATCT 1 cut(s) 952
Bme1390I CCNGG 7 cut(s) 78, 740, 1393, 1451, 1520, 1871, 1900
Bme18I GGWCC 4 cut(s) 1156, 1271, 1389, 1980
BmeT110I CYCGRG 1 cut(s) 2138
BmgBI CACGTC 1 cut(s) 302
BmgT120I GGNCC 5 cut(s) 92, 1156, 1271, 1389, 1980
BmiI GGNNCC 8 cut(s) 139, 559, 1107, 1158, 1319, 1390, 1595, 1883
BmrFI CCNGG 7 cut(s) 78, 740, 1393, 1451, 1520, 1871, 1900
BmrI ACTGGG 1 cut(s) 137
BmsI GCATC 6 cut(s) 124, 212, 301, 484, 1029, 1346
BmuI ACTGGG 1 cut(s) 137
BoxI GACNNNNGTC 1 cut(s) 624
BpiI GAAGAC 4 cut(s) 171, 528, 1404, 2067
BplI GAGNNNNNCTC 2 cut(s) 1870, 1902
Bpu10I CCTNAGC 1 cut(s) 734
BpuEI CTTGAG 1 cut(s) 356
BpuMI CCSGG 3 cut(s) 78, 1451, 1900
Bsa29I ATCGAT 1 cut(s) 38
BsaAI YACGTR 1 cut(s) 757
BsaHI GRCGYC 1 cut(s) 168
BsaI GGTCTC 1 cut(s) 632
BsaJI CCNNGG 5 cut(s) 77, 739, 994, 1008, 1392
BsaWI WCCGGW 1 cut(s) 1021
BsaXI ACNNNNNCTCC 6 cut(s) 49, 79, 793, 823, 1840, 1870
Bsc4I CCNNNNNNNGG 3 cut(s) 134, 739, 1064
Bse1I ACTGG 4 cut(s) 143, 171, 1854, 2193
BseBI CCWGG 4 cut(s) 740, 1393, 1520, 1871
BseCI ATCGAT 1 cut(s) 38
BseDI CCNNGG 5 cut(s) 77, 739, 994, 1008, 1392
BseGI GGATG 6 cut(s) 1036, 1390, 1420, 1599, 1780, 2224
BseLI CCNNNNNNNGG 3 cut(s) 134, 739, 1064
BseMII CTCAG 3 cut(s) 748, 903, 1284
BseNI ACTGG 4 cut(s) 143, 171, 1854, 2193
BseRI GAGGAG 4 cut(s) 814, 974, 1118, 1878
BseSI GKGCMC 2 cut(s) 1596, 2091
BseXI GCAGC 8 cut(s) 866, 1321, 2186, 2189, 2192, 2195, 2198, 2201
BseYI CCCAGC 1 cut(s) 1422
Bsh1236I CGCG 1 cut(s) 1750
Bsh1285I CGRYCG 1 cut(s) 42
BshFI GGCC 7 cut(s) 76, 94, 732, 867, 1486, 2046, 2155
BshNI GGYRCC 3 cut(s) 137, 1317, 1593
BshVI ATCGAT 1 cut(s) 38
BsiEI CGRYCG 1 cut(s) 42
BsiHKAI GWGCWC 1 cut(s) 105
BsiHKCI CYCGRG 1 cut(s) 2138
BsiSI CCGG 6 cut(s) 18, 77, 95, 1022, 1451, 1900
BslFI GGGAC 5 cut(s) 513, 1402, 1439, 1529, 1730
BslI CCNNNNNNNGG 3 cut(s) 134, 739, 1064
BsmAI GTCTC 3 cut(s) 632, 1007, 2219
BsmFI GGGAC 5 cut(s) 513, 1402, 1439, 1529, 1730
BsmI GAATGC 3 cut(s) 243, 1424, 2106
BsnI GGCC 7 cut(s) 76, 94, 732, 867, 1486, 2046, 2155
Bso31I GGTCTC 1 cut(s) 632
BsoBI CYCGRG 1 cut(s) 2138
Bsp1286I GDGCHC 4 cut(s) 105, 1542, 1596, 2091
Bsp143I GATC 9 cut(s) 35, 39, 580, 952, 998, 1054, 1232, 1462, 2145
Bsp19I CCATGG 1 cut(s) 994
BspACI CCGC 7 cut(s) 55, 225, 275, 1216, 1748, 2156, 2201
BspANI GGCC 7 cut(s) 76, 94, 732, 867, 1486, 2046, 2155
BspCNI CTCAG 3 cut(s) 747, 904, 1285
BspDI ATCGAT 1 cut(s) 38
BspFNI CGCG 1 cut(s) 1750
BspHI TCATGA 1 cut(s) 2234
BspLI GGNNCC 8 cut(s) 139, 559, 1107, 1158, 1319, 1390, 1595, 1883
BspPI GGATC 3 cut(s) 43, 1006, 1049
BspQI GCTCTTC 1 cut(s) 93
BspT107I GGYRCC 3 cut(s) 137, 1317, 1593
BspTNI GGTCTC 1 cut(s) 632
BsrI ACTGG 4 cut(s) 143, 171, 1854, 2193
BssECI CCNNGG 5 cut(s) 77, 739, 994, 1008, 1392
BssMI GATC 9 cut(s) 35, 39, 580, 952, 998, 1054, 1232, 1462, 2145
BssNAI GTATAC 1 cut(s) 814
BssNI GRCGYC 1 cut(s) 168
BssT1I CCWWGG 1 cut(s) 994
Bst1107I GTATAC 1 cut(s) 814
Bst2UI CCWGG 4 cut(s) 740, 1393, 1520, 1871
Bst4CI ACNGT 5 cut(s) 65, 348, 389, 680, 2098
Bst6I CTCTTC 5 cut(s) 93, 646, 1029, 1249, 1704
BstACI GRCGYC 1 cut(s) 168
BstAPI GCANNNNNTGC 1 cut(s) 271
BstBAI YACGTR 1 cut(s) 757
BstC8I GCNNGC 4 cut(s) 614, 822, 1867, 2104
BstDEI CTNAG 6 cut(s) 734, 912, 1223, 1293, 1615, 1938
BstDSI CCRYGG 1 cut(s) 994
BstF5I GGATG 6 cut(s) 1036, 1390, 1420, 1599, 1780, 2224
BstFNI CGCG 1 cut(s) 1750
BstHHI GCGC 2 cut(s) 265, 328
BstKTI GATC 9 cut(s) 38, 42, 583, 955, 1001, 1057, 1235, 1465, 2148
BstMAI GTCTC 3 cut(s) 632, 1007, 2219
BstMBI GATC 9 cut(s) 35, 39, 580, 952, 998, 1054, 1232, 1462, 2145
BstMCI CGRYCG 1 cut(s) 42
BstNI CCWGG 4 cut(s) 740, 1393, 1520, 1871
BstNSI RCATGY 2 cut(s) 911, 1138
BstPAI GACNNNNGTC 1 cut(s) 624
BstSCI CCNGG 7 cut(s) 76, 738, 1391, 1449, 1518, 1869, 1898
BstSFI CTRYAG 1 cut(s) 2097
BstSLI GKGCMC 2 cut(s) 1596, 2091
BstUI CGCG 1 cut(s) 1750
BstV1I GCAGC 8 cut(s) 866, 1321, 2186, 2189, 2192, 2195, 2198, 2201
BstV2I GAAGAC 4 cut(s) 171, 528, 1404, 2067
BstX2I RGATCY 3 cut(s) 952, 998, 1054
BstXI CCANNNNNNTGG 2 cut(s) 569, 1710
BstYI RGATCY 3 cut(s) 952, 998, 1054
BstZ17I GTATAC 1 cut(s) 814
Bsu15I ATCGAT 1 cut(s) 38
BsuRI GGCC 7 cut(s) 76, 94, 732, 867, 1486, 2046, 2155
BsuTUI ATCGAT 1 cut(s) 38
BtgI CCRYGG 1 cut(s) 994
BtgZI GCGATG 1 cut(s) 1460
BtrI CACGTC 1 cut(s) 302
BtsCI GGATG 6 cut(s) 1036, 1390, 1420, 1599, 1780, 2224
BtsIMutI CAGTG 2 cut(s) 178, 1908
Cac8I GCNNGC 4 cut(s) 614, 822, 1867, 2104
CciI TCATGA 1 cut(s) 2234
CfoI GCGC 2 cut(s) 265, 328
Cfr13I GGNCC 5 cut(s) 92, 1156, 1271, 1389, 1980
ClaI ATCGAT 1 cut(s) 38
CseI GACGC 3 cut(s) 19, 176, 1739
Csp6I GTAC 7 cut(s) 9, 50, 138, 184, 705, 1318, 1692
CviAII CATG 8 cut(s) 323, 382, 725, 908, 995, 1135, 1710, 2235
CviQI GTAC 7 cut(s) 9, 50, 138, 184, 705, 1318, 1692
DdeI CTNAG 6 cut(s) 734, 912, 1223, 1293, 1615, 1938
DpnI GATC 9 cut(s) 37, 41, 582, 954, 1000, 1056, 1234, 1464, 2147
DpnII GATC 9 cut(s) 35, 39, 580, 952, 998, 1054, 1232, 1462, 2145
DrdI GACNNNNNNGTC 1 cut(s) 1514
DseDI GACNNNNNNGTC 1 cut(s) 1514
EaeI YGGCCR 2 cut(s) 74, 2044
Eam1104I CTCTTC 5 cut(s) 93, 646, 1029, 1249, 1704
EarI CTCTTC 5 cut(s) 93, 646, 1029, 1249, 1704
EciI GGCGGA 1 cut(s) 70
Ecl136II GAGCTC 1 cut(s) 103
Eco130I CCWWGG 1 cut(s) 994
Eco24I GRGCYC 2 cut(s) 105, 1542
Eco31I GGTCTC 1 cut(s) 632
Eco32I GATATC 1 cut(s) 879
Eco47I GGWCC 4 cut(s) 1156, 1271, 1389, 1980
Eco53kI GAGCTC 1 cut(s) 103
Eco57I CTGAAG 3 cut(s) 846, 1269, 1302
Eco72I CACGTG 1 cut(s) 757
Eco88I CYCGRG 1 cut(s) 2138
EcoICRI GAGCTC 1 cut(s) 103
EcoO109I RGGNCCY 3 cut(s) 1156, 1389, 1980
EcoRI GAATTC 1 cut(s) 463
EcoRII CCWGG 4 cut(s) 738, 1391, 1518, 1869
EcoRV GATATC 1 cut(s) 879
EcoT14I CCWWGG 1 cut(s) 994
EcoT38I GRGCYC 2 cut(s) 105, 1542
ErhI CCWWGG 1 cut(s) 994
FaeI CATG 8 cut(s) 326, 385, 728, 911, 998, 1138, 1713, 2238
FaqI GGGAC 5 cut(s) 513, 1402, 1439, 1529, 1730
FatI CATG 8 cut(s) 322, 381, 724, 907, 994, 1134, 1709, 2234
FauI CCCGC 2 cut(s) 1223, 1755
FbaI TGATCA 1 cut(s) 580
FblI GTMKAC 3 cut(s) 813, 904, 1819
FokI GGATG 6 cut(s) 1043, 1397, 1427, 1586, 1787, 2231
FriOI GRGCYC 2 cut(s) 105, 1542
FspBI CTAG 2 cut(s) 956, 1959
GlaI GCGC 2 cut(s) 264, 327
GsaI CCCAGC 1 cut(s) 1426
HaeIII GGCC 7 cut(s) 76, 94, 732, 867, 1486, 2046, 2155
HapII CCGG 6 cut(s) 18, 77, 95, 1022, 1451, 1900
HgaI GACGC 3 cut(s) 19, 176, 1739
HhaI GCGC 2 cut(s) 265, 328
Hin1I GRCGYC 1 cut(s) 168
Hin1II CATG 8 cut(s) 326, 385, 728, 911, 998, 1138, 1713, 2238
Hin6I GCGC 2 cut(s) 263, 326
HinP1I GCGC 2 cut(s) 263, 326
HincII GTYRAC 1 cut(s) 369
HindII GTYRAC 1 cut(s) 369
HindIII AAGCTT 3 cut(s) 149, 1090, 1948
HpaII CCGG 6 cut(s) 18, 77, 95, 1022, 1451, 1900
HphI GGTGA 5 cut(s) 239, 584, 845, 1133, 1790
Hpy166II GTNNAC 7 cut(s) 369, 760, 814, 905, 945, 1507, 1820
Hpy8I GTNNAC 7 cut(s) 369, 760, 814, 905, 945, 1507, 1820
Hpy99I CGWCG 2 cut(s) 35, 306
HpyAV CCTTC 8 cut(s) 403, 870, 1053, 1244, 1476, 1573, 1808, 1808
HpyCH4III ACNGT 5 cut(s) 65, 348, 389, 680, 2098
HpyCH4IV ACGT 2 cut(s) 301, 756
HpyCH4V TGCA 8 cut(s) 243, 299, 616, 789, 1169, 1337, 1721, 2106
HpyF3I CTNAG 6 cut(s) 734, 912, 1223, 1293, 1615, 1938
HpySE526I ACGT 2 cut(s) 301, 756
Hsp92I GRCGYC 1 cut(s) 168
Hsp92II CATG 8 cut(s) 326, 385, 728, 911, 998, 1138, 1713, 2238
HspAI GCGC 2 cut(s) 263, 326
KpnI GGTACC 2 cut(s) 141, 1321
Ksp22I TGATCA 1 cut(s) 580
Kzo9I GATC 9 cut(s) 35, 39, 580, 952, 998, 1054, 1232, 1462, 2145
LguI GCTCTTC 1 cut(s) 93
LmnI GCTCC 3 cut(s) 769, 779, 1105
Lsp1109I GCAGC 8 cut(s) 866, 1321, 2186, 2189, 2192, 2195, 2198, 2201
LweI GCATC 6 cut(s) 124, 212, 301, 484, 1029, 1346
MaeI CTAG 2 cut(s) 956, 1959
MaeII ACGT 2 cut(s) 301, 756
MaeIII GTNAC 6 cut(s) 592, 752, 1526, 1856, 2015, 2133
MalI GATC 9 cut(s) 37, 41, 582, 954, 1000, 1056, 1234, 1464, 2147
MboI GATC 9 cut(s) 35, 39, 580, 952, 998, 1054, 1232, 1462, 2145
MfeI CAATTG 4 cut(s) 563, 696, 1236, 1674
MflI RGATCY 3 cut(s) 952, 998, 1054
MhlI GDGCHC 4 cut(s) 105, 1542, 1596, 2091
MlsI TGGCCA 1 cut(s) 2046
MluCI AATT 8 cut(s) 463, 563, 633, 696, 967, 1236, 1674, 1835
MluNI TGGCCA 1 cut(s) 2046
MlyI GAGTC 5 cut(s) 540, 821, 971, 1752, 2081
MmeI TCCRAC 1 cut(s) 13
Mox20I TGGCCA 1 cut(s) 2046
MroXI GAANNNNTTC 2 cut(s) 496, 655
MscI TGGCCA 1 cut(s) 2046
MseI TTAA 5 cut(s) 210, 1328, 1571, 1830, 1838
MslI CAYNNNNRTG 4 cut(s) 220, 510, 1708, 2111
Msp20I TGGCCA 1 cut(s) 2046
MspA1I CMGCKG 1 cut(s) 824
MspI CCGG 6 cut(s) 18, 77, 95, 1022, 1451, 1900
MspR9I CCNGG 7 cut(s) 78, 740, 1393, 1451, 1520, 1871, 1900
MunI CAATTG 4 cut(s) 563, 696, 1236, 1674
Mva1269I GAATGC 3 cut(s) 243, 1424, 2106
MvaI CCWGG 4 cut(s) 740, 1393, 1520, 1871
MvnI CGCG 1 cut(s) 1750
NciI CCSGG 3 cut(s) 78, 1451, 1900
NcoI CCATGG 1 cut(s) 994
NdeII GATC 9 cut(s) 35, 39, 580, 952, 998, 1054, 1232, 1462, 2145
NlaIII CATG 8 cut(s) 326, 385, 728, 911, 998, 1138, 1713, 2238
NlaIV GGNNCC 8 cut(s) 139, 559, 1107, 1158, 1319, 1390, 1595, 1883
NmuCI GTSAC 3 cut(s) 592, 752, 1856
NspI RCATGY 2 cut(s) 911, 1138
PaeR7I CTCGAG 1 cut(s) 2138
PagI TCATGA 1 cut(s) 2234
PciSI GCTCTTC 1 cut(s) 93
PcsI WCGNNNNNNNCGW 1 cut(s) 39
PctI GAATGC 3 cut(s) 243, 1424, 2106
PdmI GAANNNNTTC 2 cut(s) 496, 655
PfeI GAWTC 8 cut(s) 14, 257, 497, 836, 983, 1004, 1115, 1658
Ple19I CGATCG 1 cut(s) 42
PleI GAGTC 5 cut(s) 540, 821, 970, 1751, 2080
PmaCI CACGTG 1 cut(s) 757
PmlI CACGTG 1 cut(s) 757
PpsI GAGTC 5 cut(s) 540, 821, 970, 1751, 2080
Ppu21I YACGTR 1 cut(s) 757
PpuMI RGGWCCY 3 cut(s) 1156, 1389, 1980
PshAI GACNNNNGTC 1 cut(s) 624
Psp124BI GAGCTC 1 cut(s) 105
Psp5II RGGWCCY 3 cut(s) 1156, 1389, 1980
Psp6I CCWGG 4 cut(s) 738, 1391, 1518, 1869
PspCI CACGTG 1 cut(s) 757
PspFI CCCAGC 1 cut(s) 1422
PspGI CCWGG 4 cut(s) 738, 1391, 1518, 1869
PspN4I GGNNCC 8 cut(s) 139, 559, 1107, 1158, 1319, 1390, 1595, 1883
PspPI GGNCC 5 cut(s) 92, 1156, 1271, 1389, 1980
PspPPI RGGWCCY 3 cut(s) 1156, 1389, 1980
PsuI RGATCY 3 cut(s) 952, 998, 1054
PvuI CGATCG 1 cut(s) 42
PvuII CAGCTG 1 cut(s) 824
RsaI GTAC 7 cut(s) 10, 51, 139, 185, 706, 1319, 1693
RsaNI GTAC 7 cut(s) 9, 50, 138, 184, 705, 1318, 1692
RseI CAYNNNNRTG 4 cut(s) 220, 510, 1708, 2111
SacI GAGCTC 1 cut(s) 105
SapI GCTCTTC 1 cut(s) 93
SaqAI TTAA 5 cut(s) 210, 1328, 1571, 1830, 1838
Sau3AI GATC 9 cut(s) 35, 39, 580, 952, 998, 1054, 1232, 1462, 2145
Sau96I GGNCC 5 cut(s) 92, 1156, 1271, 1389, 1980
SchI GAGTC 5 cut(s) 540, 821, 971, 1752, 2081
ScrFI CCNGG 7 cut(s) 78, 740, 1393, 1451, 1520, 1871, 1900
SduI GDGCHC 4 cut(s) 105, 1542, 1596, 2091
SfaNI GCATC 6 cut(s) 124, 212, 301, 484, 1029, 1346
SfcI CTRYAG 1 cut(s) 2097
Sfr274I CTCGAG 1 cut(s) 2138
SinI GGWCC 4 cut(s) 1156, 1271, 1389, 1980
SlaI CTCGAG 1 cut(s) 2138
SmiMI CAYNNNNRTG 4 cut(s) 220, 510, 1708, 2111
SmlI CTYRAG 2 cut(s) 335, 2138
SmoI CTYRAG 2 cut(s) 335, 2138
Sse9I AATT 8 cut(s) 463, 563, 633, 696, 967, 1236, 1674, 1835
SsiI CCGC 7 cut(s) 55, 225, 275, 1216, 1748, 2156, 2201
SspMI CTAG 2 cut(s) 956, 1959
SstI GAGCTC 1 cut(s) 105
StyD4I CCNGG 7 cut(s) 76, 738, 1391, 1449, 1518, 1869, 1898
StyI CCWWGG 1 cut(s) 994
TaaI ACNGT 5 cut(s) 65, 348, 389, 680, 2098
TaiI ACGT 2 cut(s) 304, 759
TaqI TCGA 8 cut(s) 38, 220, 304, 601, 1348, 1809, 1925, 2139
TasI AATT 8 cut(s) 463, 563, 633, 696, 967, 1236, 1674, 1835
TatI WGTACW 1 cut(s) 8
TauI GCSGC 2 cut(s) 277, 2158
TfiI GAWTC 8 cut(s) 14, 257, 497, 836, 983, 1004, 1115, 1658
Tru1I TTAA 5 cut(s) 210, 1328, 1571, 1830, 1838
Tru9I TTAA 5 cut(s) 210, 1328, 1571, 1830, 1838
TscAI CASTG 2 cut(s) 178, 1915
TseFI GTSAC 3 cut(s) 592, 752, 1856
TseI GCWGC 8 cut(s) 854, 1334, 2174, 2177, 2180, 2183, 2186, 2189
Tsp45I GTSAC 3 cut(s) 592, 752, 1856
TspGWI ACGGA 1 cut(s) 777
TspRI CASTG 2 cut(s) 178, 1915
VpaK11BI GGWCC 4 cut(s) 1156, 1271, 1389, 1980
XapI RAATTY 1 cut(s) 463
XbaI TCTAGA 1 cut(s) 955
XceI RCATGY 2 cut(s) 911, 1138
XcmI CCANNNNNNNNNTGG 1 cut(s) 455
XhoI CTCGAG 1 cut(s) 2138
XmiI GTMKAC 3 cut(s) 813, 904, 1819
XmnI GAANNNNTTC 2 cut(s) 496, 655
XspI CTAG 2 cut(s) 956, 1959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.