Rorug01G0442600

PWWP domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0006536
Physical Location & Seq
Forward (+)
53984804 .. 53997944
13141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0442600.1

Sequence Viewer

Length: 2133 bp
ATGGATACTCATGCAGTACAATCTCGTGTTGAAGGTGCGGATGAGGAGCCCCATGAGAAGACGTCGGTTTTGAAGAAGGTGAAGGCGAAAGCGAGGAAGATGAGGGATACTATCACAGGGCAGGGCCAGCTTGGCCATGAACCCGAAGGCCATCATACCCCTGATGATCATGATCTGGATGAGGAAGATGTAGACGACCCAGAAGTTCAAGGTGCACCAATATATGACTCGGCAGTTAAGAAAACTGATGCTCACGTGCAAGGAGACGTTTTGAAGGTGCCTAAGGTGAATTTCGGAGACACTAGAGCGGGGCATGATGAGCATGAACCTGTAGTTGCAAGGGAGAGGCCTAATGTCAATGTCAGTGATCCAACGAGGTCTAATGTGCCTGGGCTACAAGGAACTACAGGCCACGGTGCAATGCACAACTCTGCCGCGACTAGGAGGACTGATGCTCCTGTGCAAGGAGGCATTCATTTCGGAGAGACGCACCATGAATATGATCCTGTAGCGCCAAAAGAGAGGTCTAATGTCGGAATAAGTGATCCGATGAGGGACTCTGTGCCTGGGCAAGATCGAACTACTACAGGGCAGGAGGATCTTTTGGGAGGAGCAAGGACCAAACCGGCTGCTCCAACAACTGGACCTGTTCCTAAGCATGAAGAGCCAAAGGGATTGGTTGATGTAACTGGGGGAGGTCCTCAGACTAGGGTCAAATTGGGGCAGACTGATGTACTAGGGGAAGGGACTCCTGTGCCACAGAGTTACCCTGTCTCTTCTGGAACTCAAAGAAGTGCCATGGACGTCGACCCTAAGCAGACATTTGTTTCCGGCCAGGGAGGGCAGTTAGGTCAGTCCAGGGTCAATTTGGACCGACCTAGAGGACTTGAGGAAGACCCTCATGCGCCTAAGGCCAATCCTCTAGCTTACACTCCTTCAAATTACGAGACCAAAGTCACTGATCCCACCAAATCTGGTGGTCAGGAAATTGGAGTAACACCAATACTTCATTCCTTCGATAAGATGAACCTACATGGTGATGATCGCCAATACTTGAACAATGGTGCCAAACACAATCTGTCTACCGGAAGCCATGACCAATTCTCTCCTGAAAAACCATCAAACCAGGGCAGCACCTACACTGAAAAAATCTCATCTGCCACTTCAGCCATTGCCGACAAGGCAATTTCAGCAAAGAATGCAGTTGCTTCCAAGTTGGGATATGGTGGGAACGAGCCTGATCATGATGACTACTCGAGAGGCTATGTTACTGGTGCTGGGAAGTCTGGTTCATCACCTCGGAACAAAGTACTTGATCCCTCTACTAACCAATTCAGACCAGCAGAGACTCCACAAGTCCGAGGAACCATCAAACCGGAATATGATACCACAACTGATCAGAAGCCAGTCCAGACAAGCGGAAGCTATACTGAGAAGATTTCATCTGCCGGATCTGCCATTGCTGACAAGGCGATATCCGCAAAGAATGTTGTTGCTTCCAAGCTGGGATATGGGGCAACTGATCAGGTGCATGACAGGGAAGATGTTACTCGTACTAATGTGCAGTCTGGGACAACAGCAGCGGATCAACATGGCAAGACGATTACCTCTACAGTTGCGGAGAAGATAACACCTGTGTATGAGAAGGTTACCGGGGCAGGGACTGCTGTGATGTCCAAGATTCAAGGCAGGAGTACTGTTAGTAGCGACCGAGATACTAGTACTGGCGTTGTTAATCAAGCTGGACAGGACAAAGGGGTGTCTGTGAAGGACTATTTCGTGGAGAAGCTGAGGCCTGGAGAGGAAGACAGAGCACTTTCTGAGGTTATAACTGAGACATTACACAAGCATAAGCCGGGTGTTAAGCAAGAGACAGGGTACTCTGCTAGTGCTAGGCCCAAGGGGAAGGTGACGGAGTCGGTGGAGGTGAGGCAGCGTTTGGGGGATACCGGGGGGAATGAGAATTTTGTGGTGGATAAGATTAAGGACTCTGTTGGTTCGATGCTTGGTGGTACTAACAAGAGCGATGAAGAACGTCGGCAAGGTATCTCTAGCTCTGCTGGTACCGGGGAGGAAGATCGGCGCGGTGTTTGTGTGGTGGAGCACCGGAGGCTACAGGAATCCGGCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWWP

Protein Analysis

710

Amino Acids

75.71

Weight (kDa)

5.97

Isoelectric Point (pI)

33.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LTI65_LTI78_N PF23403 17 - 79 2.7e-20 LTI65/LTI78 CAP160 N-terminal
LTI65_LTI78_NYQTKV PF23402 287 - 346 2.3e-31 LTI65/LTI78 NYQTKV repeat
CAP160 PF07918 384 - 410 2.6e-15 CAP160 repeat
CAP160 PF07918 480 - 505 1.5e-13 CAP160 repeat
LTI65_PGEED PF23399 584 - 614 3.2e-19 LTI65/LTI78 PGEED repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1829
AatII GACGTC 2 cut(s) 65, 807
Acc65I GGTACC 1 cut(s) 2063
AccB1I GGYRCC 3 cut(s) 277, 1064, 2063
AccB7I CCANNNNNTGG 1 cut(s) 641
AccBSI CCGCTC 1 cut(s) 308
AccI GTMKAC 3 cut(s) 192, 807, 1082
AccII CGCG 2 cut(s) 437, 2085
AciI CCGC 8 cut(s) 38, 308, 435, 1419, 1479, 1583, 1619, 2085
AclWI GGATC 8 cut(s) 362, 497, 539, 606, 956, 1310, 1459, 1593
AcoI YGGCCR 2 cut(s) 133, 832
AcsI RAATTY 2 cut(s) 289, 1963
AcuI CTGAAG 1 cut(s) 1149
AcvI CACGTG 1 cut(s) 256
AcyI GRCGYC 2 cut(s) 62, 804
AfaI GTAC 9 cut(s) 18, 735, 1311, 1555, 1696, 1723, 1880, 2014, 2065
AfiI CCNNNNNNNGG 4 cut(s) 441, 464, 641, 1659
AgsI TTSAA 7 cut(s) 32, 73, 209, 274, 939, 1057, 1685
AhlI ACTAGT 1 cut(s) 1718
AjnI CCWGG 6 cut(s) 388, 565, 834, 857, 1125, 1795
AjuI GAANNNNNNNTTGG 2 cut(s) 994, 1026
AloI GAACNNNNNNTCC 2 cut(s) 1273, 1305
AluBI AGCT 7 cut(s) 130, 926, 1425, 1504, 1742, 1789, 2055
AluI AGCT 7 cut(s) 130, 926, 1425, 1504, 1742, 1789, 2055
Alw21I GWGCWC 3 cut(s) 217, 1816, 2106
Alw26I GTCTC 8 cut(s) 258, 291, 479, 778, 941, 1340, 1829, 1865
Alw44I GTGCAC 1 cut(s) 213
AlwI GGATC 8 cut(s) 362, 497, 539, 606, 956, 1310, 1459, 1593
AlwNI CAGNNNCTG 1 cut(s) 1664
Ama87I CYCGRG 1 cut(s) 1255
AoxI GGCC 9 cut(s) 124, 133, 148, 347, 409, 832, 912, 1793, 1895
ApaLI GTGCAC 1 cut(s) 213
ApeKI GCWGC 4 cut(s) 629, 1131, 1580, 1933
ApoI RAATTY 2 cut(s) 289, 1963
ArsI GACNNNNNNTTYG 4 cut(s) 52, 84, 509, 541
Asp718I GGTACC 1 cut(s) 2063
AspLEI GCGC 3 cut(s) 514, 907, 2085
AspS9I GGNCC 6 cut(s) 124, 618, 644, 698, 871, 1896
AsuC2I CCSGG 4 cut(s) 1654, 1857, 1951, 2068
AsuHPI GGTGA 6 cut(s) 91, 298, 1049, 1287, 1921, 1939
AvaI CYCGRG 1 cut(s) 1255
AvaII GGWCC 4 cut(s) 618, 644, 698, 871
AxyI CCTNAGG 2 cut(s) 282, 909
BaeGI GKGCMC 1 cut(s) 217
BalI TGGCCA 1 cut(s) 135
BanI GGYRCC 3 cut(s) 277, 1064, 2063
BanII GRGCYC 1 cut(s) 51
BauI CACGAG 1 cut(s) 24
BbrPI CACGTG 1 cut(s) 256
BbsI GAAGAC 3 cut(s) 65, 900, 1812
Bbv12I GWGCWC 3 cut(s) 217, 1816, 2106
BbvCI CCTCAGC 1 cut(s) 1790
BbvI GCAGC 4 cut(s) 616, 1143, 1592, 1945
BccI CCATC 3 cut(s) 159, 1126, 1376
BcgI CGANNNNNNTGC 2 cut(s) 460, 494
BciT130I CCWGG 6 cut(s) 390, 567, 836, 859, 1127, 1797
BciVI GTATCC 2 cut(s) 100, 1939
BclI TGATCA 4 cut(s) 166, 1240, 1396, 1522
BcnI CCSGG 4 cut(s) 1654, 1857, 1951, 2068
BcoDI GTCTC 8 cut(s) 258, 291, 479, 778, 941, 1340, 1829, 1865
BcuI ACTAGT 1 cut(s) 1718
BfmI CTRYAG 6 cut(s) 330, 405, 507, 585, 1611, 2114
BfoI RGCGCY 1 cut(s) 515
BfuI GTATCC 2 cut(s) 100, 1939
BglI GCCNNNNNGGC 2 cut(s) 132, 1181
BisI GCNGC 5 cut(s) 435, 630, 1132, 1581, 1934
BlsI GCNGC 5 cut(s) 436, 631, 1133, 1582, 1935
BmcAI AGTACT 3 cut(s) 1311, 1696, 1723
Bme18I GGWCC 4 cut(s) 618, 644, 698, 871
BmeT110I CYCGRG 1 cut(s) 1255
BmgT120I GGNCC 6 cut(s) 124, 618, 644, 698, 871, 1896
BmiI GGNNCC 5 cut(s) 48, 279, 1066, 1366, 2065
BmrI ACTGGG 1 cut(s) 699
BmsI GCATC 3 cut(s) 238, 442, 1992
BmuI ACTGGG 1 cut(s) 699
BoxI GACNNNNGTC 2 cut(s) 710, 953
BpiI GAAGAC 3 cut(s) 65, 900, 1812
BpmI CTGGAG 1 cut(s) 1818
Bpu10I CCTNAGC 3 cut(s) 654, 813, 1790
BpuEI CTTGAG 1 cut(s) 908
BpuMI CCSGG 4 cut(s) 1654, 1857, 1951, 2068
BsaAI YACGTR 1 cut(s) 256
BsaBI GATNNNNATC 1 cut(s) 171
BsaHI GRCGYC 2 cut(s) 62, 804
BsaI GGTCTC 1 cut(s) 941
BsaWI WCCGGW 3 cut(s) 1085, 1375, 2106
BsaXI ACNNNNNCTCC 2 cut(s) 439, 469
Bsc4I CCNNNNNNNGG 4 cut(s) 441, 464, 641, 1659
Bse118I RCCGGY 1 cut(s) 625
Bse1I ACTGG 5 cut(s) 646, 694, 1276, 1406, 1729
Bse21I CCTNAGG 2 cut(s) 282, 909
Bse3DI GCAATG 3 cut(s) 426, 1170, 1458
Bse8I GATNNNNATC 1 cut(s) 171
BseBI CCWGG 6 cut(s) 390, 567, 836, 859, 1127, 1797
BseGI GGATG 2 cut(s) 46, 184
BseJI GATNNNNATC 1 cut(s) 171
BseLI CCNNNNNNNGG 4 cut(s) 441, 464, 641, 1659
BseMI GCAATG 3 cut(s) 426, 1170, 1458
BseMII CTCAG 5 cut(s) 716, 1422, 1781, 1812, 1824
BseNI ACTGG 5 cut(s) 646, 694, 1276, 1406, 1729
BseRI GAGGAG 2 cut(s) 59, 624
BseSI GKGCMC 1 cut(s) 217
BseXI GCAGC 4 cut(s) 616, 1143, 1592, 1945
BseYI CCCAGC 2 cut(s) 1277, 1504
BsgI GTGCAG 1 cut(s) 1583
Bsh1236I CGCG 2 cut(s) 437, 2085
Bsh1285I CGRYCG 1 cut(s) 1711
BshFI GGCC 9 cut(s) 126, 135, 150, 349, 411, 834, 914, 1795, 1897
BshNI GGYRCC 3 cut(s) 277, 1064, 2063
BsiEI CGRYCG 1 cut(s) 1711
BsiHKAI GWGCWC 3 cut(s) 217, 1816, 2106
BsiHKCI CYCGRG 1 cut(s) 1255
BslFI GGGAC 4 cut(s) 569, 760, 1585, 1675
BslI CCNNNNNNNGG 4 cut(s) 441, 464, 641, 1659
BsmAI GTCTC 8 cut(s) 258, 291, 479, 778, 941, 1340, 1829, 1865
BsmBI CGTCTC 2 cut(s) 258, 479
BsmFI GGGAC 4 cut(s) 569, 760, 1585, 1675
BsmI GAATGC 2 cut(s) 471, 1204
BsnI GGCC 9 cut(s) 126, 135, 150, 349, 411, 834, 914, 1795, 1897
Bso31I GGTCTC 1 cut(s) 941
BsoBI CYCGRG 1 cut(s) 1255
Bsp1286I GDGCHC 4 cut(s) 51, 217, 1816, 2106
Bsp19I CCATGG 1 cut(s) 798
BspACI CCGC 8 cut(s) 38, 308, 435, 1419, 1479, 1583, 1619, 2085
BspANI GGCC 9 cut(s) 126, 135, 150, 349, 411, 834, 914, 1795, 1897
BspCNI CTCAG 5 cut(s) 715, 1423, 1782, 1813, 1825
BspFNI CGCG 2 cut(s) 437, 2085
BspHI TCATGA 2 cut(s) 169, 1243
BspLI GGNNCC 5 cut(s) 48, 279, 1066, 1366, 2065
BspPI GGATC 8 cut(s) 362, 497, 539, 606, 956, 1310, 1459, 1593
BspQI GCTCTTC 1 cut(s) 657
BspT107I GGYRCC 3 cut(s) 277, 1064, 2063
BspTNI GGTCTC 1 cut(s) 941
BsrBI CCGCTC 1 cut(s) 308
BsrDI GCAATG 3 cut(s) 426, 1170, 1458
BsrFI RCCGGY 1 cut(s) 625
BsrI ACTGG 5 cut(s) 646, 694, 1276, 1406, 1729
BssAI RCCGGY 1 cut(s) 625
BssNI GRCGYC 2 cut(s) 62, 804
BssSI CACGAG 1 cut(s) 24
BssT1I CCWWGG 2 cut(s) 798, 1899
Bst2BI CACGAG 1 cut(s) 24
Bst2UI CCWGG 6 cut(s) 390, 567, 836, 859, 1127, 1797
Bst4CI ACNGT 3 cut(s) 416, 1615, 1699
Bst6I CTCTTC 2 cut(s) 657, 781
BstACI GRCGYC 2 cut(s) 62, 804
BstAPI GCANNNNNTGC 2 cut(s) 1199, 1664
BstBAI YACGTR 1 cut(s) 256
BstC8I GCNNGC 1 cut(s) 128
BstDEI CTNAG 9 cut(s) 282, 654, 702, 813, 909, 1431, 1790, 1821, 1833
BstDSI CCRYGG 2 cut(s) 412, 798
BstEII GGTNACC 1 cut(s) 1648
BstENI CCTNNNNNAGG 1 cut(s) 462
BstF5I GGATG 2 cut(s) 46, 184
BstFNI CGCG 2 cut(s) 437, 2085
BstH2I RGCGCY 1 cut(s) 515
BstHHI GCGC 3 cut(s) 514, 907, 2085
BstMAI GTCTC 8 cut(s) 258, 291, 479, 778, 941, 1340, 1829, 1865
BstMCI CGRYCG 1 cut(s) 1711
BstNI CCWGG 6 cut(s) 390, 567, 836, 859, 1127, 1797
BstPAI GACNNNNGTC 2 cut(s) 710, 953
BstPI GGTNACC 1 cut(s) 1648
BstSFI CTRYAG 6 cut(s) 330, 405, 507, 585, 1611, 2114
BstSLI GKGCMC 1 cut(s) 217
BstUI CGCG 2 cut(s) 437, 2085
BstV1I GCAGC 4 cut(s) 616, 1143, 1592, 1945
BstV2I GAAGAC 3 cut(s) 65, 900, 1812
BstX2I RGATCY 2 cut(s) 598, 1451
BstYI RGATCY 2 cut(s) 598, 1451
Bsu36I CCTNAGG 2 cut(s) 282, 909
BsuI GTATCC 2 cut(s) 100, 1939
BsuRI GGCC 9 cut(s) 126, 135, 150, 349, 411, 834, 914, 1795, 1897
BtgI CCRYGG 2 cut(s) 412, 798
BtgZI GCGATG 1 cut(s) 2040
BtsCI GGATG 2 cut(s) 46, 184
BtsIMutI CAGTG 3 cut(s) 370, 957, 1140
Cac8I GCNNGC 1 cut(s) 128
CaiI CAGNNNCTG 1 cut(s) 1664
CciI TCATGA 2 cut(s) 169, 1243
CfoI GCGC 3 cut(s) 514, 907, 2085
Cfr10I RCCGGY 1 cut(s) 625
Cfr13I GGNCC 6 cut(s) 124, 618, 644, 698, 871, 1896
CseI GACGC 1 cut(s) 496
Csp6I GTAC 9 cut(s) 17, 734, 1310, 1554, 1695, 1722, 1879, 2013, 2064
CspCI CAANNNNNGTGG 2 cut(s) 958, 993
CviQI GTAC 9 cut(s) 17, 734, 1310, 1554, 1695, 1722, 1879, 2013, 2064
DdeI CTNAG 9 cut(s) 282, 654, 702, 813, 909, 1431, 1790, 1821, 1833
EaeI YGGCCR 2 cut(s) 133, 832
Eam1104I CTCTTC 2 cut(s) 657, 781
EarI CTCTTC 2 cut(s) 657, 781
Eco130I CCWWGG 2 cut(s) 798, 1899
Eco147I AGGCCT 2 cut(s) 349, 1795
Eco24I GRGCYC 1 cut(s) 51
Eco31I GGTCTC 1 cut(s) 941
Eco32I GATATC 1 cut(s) 1476
Eco47I GGWCC 4 cut(s) 618, 644, 698, 871
Eco57I CTGAAG 1 cut(s) 1149
Eco72I CACGTG 1 cut(s) 256
Eco81I CCTNAGG 2 cut(s) 282, 909
Eco88I CYCGRG 1 cut(s) 1255
Eco91I GGTNACC 1 cut(s) 1648
EcoNI CCTNNNNNAGG 1 cut(s) 462
EcoO109I RGGNCCY 1 cut(s) 698
EcoO65I GGTNACC 1 cut(s) 1648
EcoRII CCWGG 6 cut(s) 388, 565, 834, 857, 1125, 1795
EcoRV GATATC 1 cut(s) 1476
EcoT14I CCWWGG 2 cut(s) 798, 1899
EcoT38I GRGCYC 1 cut(s) 51
ErhI CCWWGG 2 cut(s) 798, 1899
Esp3I CGTCTC 2 cut(s) 258, 479
FaqI GGGAC 4 cut(s) 569, 760, 1585, 1675
FauI CCCGC 1 cut(s) 301
FbaI TGATCA 4 cut(s) 166, 1240, 1396, 1522
FblI GTMKAC 3 cut(s) 192, 807, 1082
Fnu4HI GCNGC 5 cut(s) 435, 630, 1132, 1581, 1934
FokI GGATG 2 cut(s) 53, 191
FriOI GRGCYC 1 cut(s) 51
Fsp4HI GCNGC 5 cut(s) 435, 630, 1132, 1581, 1934
GlaI GCGC 3 cut(s) 513, 906, 2084
GluI GCNGC 5 cut(s) 435, 630, 1132, 1581, 1934
GsaI CCCAGC 2 cut(s) 1281, 1508
GsuI CTGGAG 1 cut(s) 1818
HaeII RGCGCY 1 cut(s) 515
HaeIII GGCC 9 cut(s) 126, 135, 150, 349, 411, 834, 914, 1795, 1897
HgaI GACGC 1 cut(s) 496
HhaI GCGC 3 cut(s) 514, 907, 2085
Hin1I GRCGYC 2 cut(s) 62, 804
Hin6I GCGC 3 cut(s) 512, 905, 2083
HinP1I GCGC 3 cut(s) 512, 905, 2083
HincII GTYRAC 1 cut(s) 808
HindII GTYRAC 1 cut(s) 808
HinfI GANTC 8 cut(s) 227, 557, 748, 1348, 1681, 1916, 1988, 2120
HphI GGTGA 6 cut(s) 91, 298, 1049, 1287, 1921, 1939
Hpy166II GTNNAC 4 cut(s) 193, 215, 808, 1083
Hpy188III TCNNGA 8 cut(s) 170, 176, 780, 983, 1109, 1244, 1257, 1411
Hpy8I GTNNAC 4 cut(s) 193, 215, 808, 1083
Hpy99I CGWCG 3 cut(s) 67, 809, 2040
HpyCH4III ACNGT 3 cut(s) 416, 1615, 1699
HpyCH4IV ACGT 5 cut(s) 62, 255, 267, 804, 2035
HpyF3I CTNAG 9 cut(s) 282, 654, 702, 813, 909, 1431, 1790, 1821, 1833
HpySE526I ACGT 5 cut(s) 62, 255, 267, 804, 2035
Hsp92I GRCGYC 2 cut(s) 62, 804
HspAI GCGC 3 cut(s) 512, 905, 2083
KpnI GGTACC 1 cut(s) 2067
Ksp22I TGATCA 4 cut(s) 166, 1240, 1396, 1522
LguI GCTCTTC 1 cut(s) 657
LmnI GCTCC 5 cut(s) 46, 460, 611, 637, 2101
Lsp1109I GCAGC 4 cut(s) 616, 1143, 1592, 1945
LweI GCATC 3 cut(s) 238, 442, 1992
MaeII ACGT 5 cut(s) 62, 255, 267, 804, 2035
MaeIII GTNAC 8 cut(s) 685, 764, 955, 994, 1267, 1546, 1648, 1909
MbiI CCGCTC 1 cut(s) 308
MflI RGATCY 2 cut(s) 598, 1451
MhlI GDGCHC 4 cut(s) 51, 217, 1816, 2106
MlsI TGGCCA 1 cut(s) 135
MluCI AATT 9 cut(s) 289, 716, 865, 940, 987, 1100, 1185, 1331, 1963
MluNI TGGCCA 1 cut(s) 135
MlyI GAGTC 6 cut(s) 221, 551, 742, 1342, 1925, 1982
MmeI TCCRAC 3 cut(s) 395, 514, 659
Mox20I TGGCCA 1 cut(s) 135
MscI TGGCCA 1 cut(s) 135
MseI TTAA 4 cut(s) 237, 1734, 1863, 1983
MslI CAYNNNNRTG 2 cut(s) 498, 1038
Msp20I TGGCCA 1 cut(s) 135
MspA1I CMGCKG 1 cut(s) 1583
Mva1269I GAATGC 2 cut(s) 471, 1204
MvaI CCWGG 6 cut(s) 390, 567, 836, 859, 1127, 1797
MvnI CGCG 2 cut(s) 437, 2085
NciI CCSGG 4 cut(s) 1654, 1857, 1951, 2068
NcoI CCATGG 1 cut(s) 798
NlaIV GGNNCC 5 cut(s) 48, 279, 1066, 1366, 2065
NmeAIII GCCGAG 1 cut(s) 209
NmuCI GTSAC 2 cut(s) 955, 1909
PaeR7I CTCGAG 1 cut(s) 1255
PagI TCATGA 2 cut(s) 169, 1243
PceI AGGCCT 2 cut(s) 349, 1795
PciSI GCTCTTC 1 cut(s) 657
PctI GAATGC 2 cut(s) 471, 1204
PfeI GAWTC 2 cut(s) 1681, 2120
PflFI GACNNNGTC 1 cut(s) 1915
PflMI CCANNNNNTGG 1 cut(s) 641
PkrI GCNGC 5 cut(s) 436, 631, 1133, 1582, 1935
PleI GAGTC 6 cut(s) 221, 551, 742, 1342, 1924, 1982
PmaCI CACGTG 1 cut(s) 256
PmlI CACGTG 1 cut(s) 256
PpsI GAGTC 6 cut(s) 221, 551, 742, 1342, 1924, 1982
Ppu21I YACGTR 1 cut(s) 256
PpuMI RGGWCCY 1 cut(s) 698
PshAI GACNNNNGTC 2 cut(s) 710, 953
PsiI TTATAA 1 cut(s) 1829
Psp5II RGGWCCY 1 cut(s) 698
Psp6I CCWGG 6 cut(s) 388, 565, 834, 857, 1125, 1795
PspCI CACGTG 1 cut(s) 256
PspEI GGTNACC 1 cut(s) 1648
PspFI CCCAGC 2 cut(s) 1277, 1504
PspGI CCWGG 6 cut(s) 388, 565, 834, 857, 1125, 1795
PspN4I GGNNCC 5 cut(s) 48, 279, 1066, 1366, 2065
PspPI GGNCC 6 cut(s) 124, 618, 644, 698, 871, 1896
PspPPI RGGWCCY 1 cut(s) 698
PstNI CAGNNNCTG 1 cut(s) 1664
PsuI RGATCY 2 cut(s) 598, 1451
PsyI GACNNNGTC 1 cut(s) 1915
RsaI GTAC 9 cut(s) 18, 735, 1311, 1555, 1696, 1723, 1880, 2014, 2065
RsaNI GTAC 9 cut(s) 17, 734, 1310, 1554, 1695, 1722, 1879, 2013, 2064
RseI CAYNNNNRTG 2 cut(s) 498, 1038
SalI GTCGAC 1 cut(s) 806
SapI GCTCTTC 1 cut(s) 657
SaqAI TTAA 4 cut(s) 237, 1734, 1863, 1983
SatI GCNGC 5 cut(s) 435, 630, 1132, 1581, 1934
Sau96I GGNCC 6 cut(s) 124, 618, 644, 698, 871, 1896
ScaI AGTACT 3 cut(s) 1311, 1696, 1723
SchI GAGTC 6 cut(s) 221, 551, 742, 1342, 1925, 1982
SduI GDGCHC 4 cut(s) 51, 217, 1816, 2106
SfaNI GCATC 3 cut(s) 238, 442, 1992
SfcI CTRYAG 6 cut(s) 330, 405, 507, 585, 1611, 2114
SfiI GGCCNNNNNGGCC 1 cut(s) 132
Sfr274I CTCGAG 1 cut(s) 1255
SinI GGWCC 4 cut(s) 618, 644, 698, 871
SlaI CTCGAG 1 cut(s) 1255
SmiMI CAYNNNNRTG 2 cut(s) 498, 1038
SmlI CTYRAG 2 cut(s) 887, 1255
SmoI CTYRAG 2 cut(s) 887, 1255
SpeI ACTAGT 1 cut(s) 1718
Sse9I AATT 9 cut(s) 289, 716, 865, 940, 987, 1100, 1185, 1331, 1963
SseBI AGGCCT 2 cut(s) 349, 1795
SsiI CCGC 8 cut(s) 38, 308, 435, 1419, 1479, 1583, 1619, 2085
StuI AGGCCT 2 cut(s) 349, 1795
StyI CCWWGG 2 cut(s) 798, 1899
TaaI ACNGT 3 cut(s) 416, 1615, 1699
TaiI ACGT 5 cut(s) 65, 258, 270, 807, 2038
TaqI TCGA 5 cut(s) 577, 807, 1017, 1256, 2000
TaqII GACCGA 2 cut(s) 888, 1725
TasI AATT 9 cut(s) 289, 716, 865, 940, 987, 1100, 1185, 1331, 1963
TatI WGTACW 5 cut(s) 16, 733, 1309, 1694, 1721
TauI GCSGC 1 cut(s) 437
TfiI GAWTC 2 cut(s) 1681, 2120
Tru1I TTAA 4 cut(s) 237, 1734, 1863, 1983
Tru9I TTAA 4 cut(s) 237, 1734, 1863, 1983
TscAI CASTG 3 cut(s) 370, 964, 1147
TseFI GTSAC 2 cut(s) 955, 1909
TseI GCWGC 4 cut(s) 629, 1131, 1580, 1933
Tsp45I GTSAC 2 cut(s) 955, 1909
TspGWI ACGGA 1 cut(s) 1928
TspRI CASTG 3 cut(s) 370, 964, 1147
Tth111I GACNNNGTC 1 cut(s) 1915
Van91I CCANNNNNTGG 1 cut(s) 641
VneI GTGCAC 1 cut(s) 213
VpaK11BI GGWCC 4 cut(s) 618, 644, 698, 871
XagI CCTNNNNNAGG 1 cut(s) 462
XapI RAATTY 2 cut(s) 289, 1963
XcmI CCANNNNNNNNNTGG 1 cut(s) 865
XhoI CTCGAG 1 cut(s) 1255
XmiI GTMKAC 3 cut(s) 192, 807, 1082
ZraI GACGTC 2 cut(s) 63, 805
ZrmI AGTACT 3 cut(s) 1311, 1696, 1723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.