PWWP domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03140 |
| fragaria_vesca | FvH4_7g33590 FvH4_7g33593 FvH4_7g33620 |
| malus_domestica | MD01G1233800.v1.1 MD07G1305900.v1.1 |
| prunus_persica | Prupe.2G324000_v2.0.a1 Prupe.2G324000_v2.0.a1 Prupe.2G324000_v2.0.a1 Prupe.2G324000_v2.0.a1 Prupe.2G324000_v2.0.a1 Prupe.2G324000_v2.0.a1 |
| pyrus_communis | pycom01g24210 pycom07g27910 |
| rosa_chinensis | RchiOBHm_Chr1g0383861 |
| rosa_laevigata | RLG00000026090 |
| rosa_multiflora | Rmu_co8472165.1_g000001 Rmu_sc0005139.1_g000032 Rmu_sc0012471.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00277190 |
| rosa_rugosa | Rorug01G0442600 |
| rosa_samantha | Rh1AG468600 Rh1BG426300 Rh1CG439000 Rh1DG459100 |
| rosa_wichuraiana | Rw1G040380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1454 |
| AccB1I | GGYRCC | 1 cut(s) | 1533 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1082 |
| AccI | GTMKAC | 1 cut(s) | 1446 |
| AccII | CGCG | 1 cut(s) | 1690 |
| AciI | CCGC | 5 cut(s) | 123, 240, 549, 1237, 1688 |
| AclWI | GGATC | 1 cut(s) | 58 |
| AcoI | YGGCCR | 3 cut(s) | 89, 1402, 1878 |
| AcsI | RAATTY | 5 cut(s) | 487, 1598, 1783, 1945, 2140 |
| AcuI | CTGAAG | 1 cut(s) | 1323 |
| AfaI | GTAC | 7 cut(s) | 19, 31, 200, 730, 1361, 1433, 2110 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 149, 1082 |
| AjiI | CACGTC | 2 cut(s) | 138, 317 |
| AjnI | CCWGG | 5 cut(s) | 481, 1331, 1349, 1458, 1812 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1065, 1097 |
| Alw21I | GWGCWC | 2 cut(s) | 120, 925 |
| Alw26I | GTCTC | 4 cut(s) | 531, 656, 1025, 1164 |
| AlwI | GGATC | 1 cut(s) | 58 |
| AoxI | GGCC | 7 cut(s) | 89, 106, 939, 1402, 1424, 1878, 2087 |
| ApaI | GGGCCC | 1 cut(s) | 110 |
| ApeKI | GCWGC | 4 cut(s) | 358, 878, 1727, 2102 |
| ApoI | RAATTY | 5 cut(s) | 487, 1598, 1783, 1945, 2140 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1169, 1201, 1909, 1941 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 679 |
| AspLEI | GCGC | 2 cut(s) | 343, 1692 |
| AspS9I | GGNCC | 8 cut(s) | 106, 107, 153, 551, 1292, 1456, 2021, 2088 |
| AsuC2I | CCSGG | 3 cut(s) | 93, 1391, 1843 |
| AvaII | GGWCC | 5 cut(s) | 153, 551, 1292, 1456, 2021 |
| BaeGI | GKGCMC | 2 cut(s) | 110, 1536 |
| BalI | TGGCCA | 1 cut(s) | 1880 |
| BanI | GGYRCC | 1 cut(s) | 1533 |
| BanII | GRGCYC | 2 cut(s) | 110, 120 |
| BauI | CACGAG | 2 cut(s) | 747, 1098 |
| BbsI | GAAGAC | 3 cut(s) | 552, 1329, 2007 |
| Bbv12I | GWGCWC | 2 cut(s) | 120, 925 |
| BbvCI | CCTCAGC | 1 cut(s) | 612 |
| BbvI | GCAGC | 4 cut(s) | 370, 890, 1714, 2114 |
| BccI | CCATC | 5 cut(s) | 719, 1394, 1556, 1709, 2101 |
| BceAI | ACGGC | 2 cut(s) | 1389, 1686 |
| BciT130I | CCWGG | 5 cut(s) | 483, 1333, 1351, 1460, 1814 |
| BciVI | GTATCC | 1 cut(s) | 514 |
| BclI | TGATCA | 1 cut(s) | 604 |
| BcnI | CCSGG | 3 cut(s) | 93, 1391, 1843 |
| BcoDI | GTCTC | 4 cut(s) | 531, 656, 1025, 1164 |
| BfaI | CTAG | 3 cut(s) | 1191, 1902, 2106 |
| BfmI | CTRYAG | 2 cut(s) | 1168, 2031 |
| BfuI | GTATCC | 1 cut(s) | 514 |
| BglII | AGATCT | 1 cut(s) | 900 |
| BisI | GCNGC | 4 cut(s) | 359, 879, 1728, 2103 |
| BlsI | GCNGC | 4 cut(s) | 360, 880, 1729, 2104 |
| BmcAI | AGTACT | 1 cut(s) | 1361 |
| Bme1390I | CCNGG | 8 cut(s) | 93, 483, 1333, 1351, 1391, 1460, 1814, 1843 |
| Bme18I | GGWCC | 5 cut(s) | 153, 551, 1292, 1456, 2021 |
| BmgBI | CACGTC | 2 cut(s) | 138, 317 |
| BmgT120I | GGNCC | 8 cut(s) | 106, 107, 153, 551, 1292, 1456, 2021, 2088 |
| BmiI | GGNNCC | 7 cut(s) | 108, 154, 155, 1535, 1826, 2023, 2090 |
| BmrFI | CCNGG | 8 cut(s) | 93, 483, 1333, 1351, 1391, 1460, 1814, 1843 |
| BmrI | ACTGGG | 1 cut(s) | 1372 |
| BmsI | GCATC | 6 cut(s) | 139, 172, 227, 316, 1047, 1252 |
| BmuI | ACTGGG | 1 cut(s) | 1372 |
| BoxI | GACNNNNGTC | 2 cut(s) | 158, 648 |
| BpiI | GAAGAC | 3 cut(s) | 552, 1329, 2007 |
| Bpu10I | CCTNAGC | 1 cut(s) | 612 |
| BpuEI | CTTGAG | 2 cut(s) | 371, 2093 |
| BpuMI | CCSGG | 3 cut(s) | 93, 1391, 1843 |
| Bsa29I | ATCGAT | 1 cut(s) | 53 |
| BsaI | GGTCTC | 1 cut(s) | 656 |
| BsaJI | CCNNGG | 8 cut(s) | 92, 623, 864, 936, 1332, 1427, 1812, 1813 |
| BsaWI | WCCGGW | 1 cut(s) | 2008 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 817, 847, 1328, 1358, 1783, 1813 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 149, 1082 |
| Bse1I | ACTGG | 5 cut(s) | 186, 522, 914, 1367, 1481 |
| BseBI | CCWGG | 5 cut(s) | 483, 1333, 1351, 1460, 1814 |
| BseCI | ATCGAT | 1 cut(s) | 53 |
| BseDI | CCNNGG | 8 cut(s) | 92, 623, 864, 936, 1332, 1427, 1812, 1813 |
| BseGI | GGATG | 5 cut(s) | 633, 1054, 1267, 1568, 1720 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 149, 1082 |
| BseMII | CTCAG | 6 cut(s) | 581, 603, 840, 918, 999, 1083 |
| BseNI | ACTGG | 5 cut(s) | 186, 522, 914, 1367, 1481 |
| BseRI | GAGGAG | 3 cut(s) | 82, 85, 838 |
| BseSI | GKGCMC | 2 cut(s) | 110, 1536 |
| BseXI | GCAGC | 4 cut(s) | 370, 890, 1714, 2114 |
| Bsh1236I | CGCG | 1 cut(s) | 1690 |
| Bsh1285I | CGRYCG | 1 cut(s) | 57 |
| BshFI | GGCC | 7 cut(s) | 91, 108, 941, 1404, 1426, 1880, 2089 |
| BshNI | GGYRCC | 1 cut(s) | 1533 |
| BshVI | ATCGAT | 1 cut(s) | 53 |
| BsiEI | CGRYCG | 1 cut(s) | 57 |
| BsiHKAI | GWGCWC | 2 cut(s) | 120, 925 |
| BsiSI | CCGG | 4 cut(s) | 92, 1391, 1843, 2009 |
| BslFI | GGGAC | 2 cut(s) | 166, 1379 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 149, 1082 |
| BsmAI | GTCTC | 4 cut(s) | 531, 656, 1025, 1164 |
| BsmBI | CGTCTC | 1 cut(s) | 531 |
| BsmFI | GGGAC | 2 cut(s) | 166, 1379 |
| BsnI | GGCC | 7 cut(s) | 91, 108, 941, 1404, 1426, 1880, 2089 |
| Bso31I | GGTCTC | 1 cut(s) | 656 |
| Bsp120I | GGGCCC | 1 cut(s) | 106 |
| Bsp1286I | GDGCHC | 4 cut(s) | 110, 120, 925, 1536 |
| Bsp143I | GATC | 7 cut(s) | 50, 54, 604, 900, 1253, 1378, 2079 |
| BspACI | CCGC | 5 cut(s) | 123, 240, 549, 1237, 1688 |
| BspANI | GGCC | 7 cut(s) | 91, 108, 941, 1404, 1426, 1880, 2089 |
| BspCNI | CTCAG | 6 cut(s) | 582, 604, 841, 917, 1000, 1082 |
| BspDI | ATCGAT | 1 cut(s) | 53 |
| BspFNI | CGCG | 1 cut(s) | 1690 |
| BspHI | TCATGA | 2 cut(s) | 1174, 2144 |
| BspLI | GGNNCC | 7 cut(s) | 108, 154, 155, 1535, 1826, 2023, 2090 |
| BspPI | GGATC | 1 cut(s) | 58 |
| BspQI | GCTCTTC | 1 cut(s) | 108 |
| BspT107I | GGYRCC | 1 cut(s) | 1533 |
| BspTNI | GGTCTC | 1 cut(s) | 656 |
| BsrI | ACTGG | 5 cut(s) | 186, 522, 914, 1367, 1481 |
| BssECI | CCNNGG | 8 cut(s) | 92, 623, 864, 936, 1332, 1427, 1812, 1813 |
| BssMI | GATC | 7 cut(s) | 50, 54, 604, 900, 1253, 1378, 2079 |
| BssSI | CACGAG | 2 cut(s) | 747, 1098 |
| BssT1I | CCWWGG | 1 cut(s) | 864 |
| Bst2BI | CACGAG | 2 cut(s) | 747, 1098 |
| Bst2UI | CCWGG | 5 cut(s) | 483, 1333, 1351, 1460, 1814 |
| Bst4CI | ACNGT | 7 cut(s) | 410, 733, 1172, 1591, 1639, 2032, 2113 |
| Bst6I | CTCTTC | 5 cut(s) | 108, 945, 1047, 1270, 1584 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 286 |
| BstC8I | GCNNGC | 4 cut(s) | 620, 638, 846, 2038 |
| BstDEI | CTNAG | 9 cut(s) | 510, 590, 612, 758, 849, 904, 1008, 1069, 1555 |
| BstF5I | GGATG | 5 cut(s) | 633, 1054, 1267, 1568, 1720 |
| BstFNI | CGCG | 1 cut(s) | 1690 |
| BstHHI | GCGC | 2 cut(s) | 343, 1692 |
| BstKTI | GATC | 7 cut(s) | 53, 57, 607, 903, 1256, 1381, 2082 |
| BstMAI | GTCTC | 4 cut(s) | 531, 656, 1025, 1164 |
| BstMBI | GATC | 7 cut(s) | 50, 54, 604, 900, 1253, 1378, 2079 |
| BstMCI | CGRYCG | 1 cut(s) | 57 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 42, 286, 1196 |
| BstNI | CCWGG | 5 cut(s) | 483, 1333, 1351, 1460, 1814 |
| BstNSI | RCATGY | 2 cut(s) | 622, 1649 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 158, 648 |
| BstSCI | CCNGG | 8 cut(s) | 91, 481, 1331, 1349, 1389, 1458, 1812, 1841 |
| BstSFI | CTRYAG | 2 cut(s) | 1168, 2031 |
| BstSLI | GKGCMC | 2 cut(s) | 110, 1536 |
| BstUI | CGCG | 1 cut(s) | 1690 |
| BstV1I | GCAGC | 4 cut(s) | 370, 890, 1714, 2114 |
| BstV2I | GAAGAC | 3 cut(s) | 552, 1329, 2007 |
| BstX2I | RGATCY | 1 cut(s) | 900 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1650 |
| BstYI | RGATCY | 1 cut(s) | 900 |
| Bsu15I | ATCGAT | 1 cut(s) | 53 |
| BsuI | GTATCC | 1 cut(s) | 514 |
| BsuRI | GGCC | 7 cut(s) | 91, 108, 941, 1404, 1426, 1880, 2089 |
| BsuTUI | ATCGAT | 1 cut(s) | 53 |
| BtgZI | GCGATG | 1 cut(s) | 261 |
| BtrI | CACGTC | 2 cut(s) | 138, 317 |
| BtsCI | GGATG | 5 cut(s) | 633, 1054, 1267, 1568, 1720 |
| BtsIMutI | CAGTG | 2 cut(s) | 193, 1851 |
| Cac8I | GCNNGC | 4 cut(s) | 620, 638, 846, 2038 |
| CciI | TCATGA | 2 cut(s) | 1174, 2144 |
| CfoI | GCGC | 2 cut(s) | 343, 1692 |
| Cfr13I | GGNCC | 8 cut(s) | 106, 107, 153, 551, 1292, 1456, 2021, 2088 |
| ClaI | ATCGAT | 1 cut(s) | 53 |
| Csp6I | GTAC | 7 cut(s) | 18, 30, 199, 729, 1360, 1432, 2109 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1857, 1892 |
| CviQI | GTAC | 7 cut(s) | 18, 30, 199, 729, 1360, 1432, 2109 |
| DdeI | CTNAG | 9 cut(s) | 510, 590, 612, 758, 849, 904, 1008, 1069, 1555 |
| DpnI | GATC | 7 cut(s) | 52, 56, 606, 902, 1255, 1380, 2081 |
| DpnII | GATC | 7 cut(s) | 50, 54, 604, 900, 1253, 1378, 2079 |
| DraI | TTTAAA | 1 cut(s) | 699 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1454 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1454 |
| EaeI | YGGCCR | 3 cut(s) | 89, 1402, 1878 |
| Eam1104I | CTCTTC | 5 cut(s) | 108, 945, 1047, 1270, 1584 |
| EarI | CTCTTC | 5 cut(s) | 108, 945, 1047, 1270, 1584 |
| Ecl136II | GAGCTC | 1 cut(s) | 118 |
| Eco130I | CCWWGG | 1 cut(s) | 864 |
| Eco147I | AGGCCT | 1 cut(s) | 941 |
| Eco24I | GRGCYC | 2 cut(s) | 110, 120 |
| Eco31I | GGTCTC | 1 cut(s) | 656 |
| Eco47I | GGWCC | 5 cut(s) | 153, 551, 1292, 1456, 2021 |
| Eco53kI | GAGCTC | 1 cut(s) | 118 |
| Eco57I | CTGAAG | 1 cut(s) | 1323 |
| EcoICRI | GAGCTC | 1 cut(s) | 118 |
| EcoO109I | RGGNCCY | 2 cut(s) | 153, 2088 |
| EcoRII | CCWGG | 5 cut(s) | 481, 1331, 1349, 1458, 1812 |
| EcoT14I | CCWWGG | 1 cut(s) | 864 |
| EcoT22I | ATGCAT | 1 cut(s) | 1651 |
| EcoT38I | GRGCYC | 2 cut(s) | 110, 120 |
| ErhI | CCWWGG | 1 cut(s) | 864 |
| Esp3I | CGTCTC | 1 cut(s) | 531 |
| FaqI | GGGAC | 2 cut(s) | 166, 1379 |
| FbaI | TGATCA | 1 cut(s) | 604 |
| FblI | GTMKAC | 1 cut(s) | 1446 |
| Fnu4HI | GCNGC | 4 cut(s) | 359, 879, 1728, 2103 |
| FokI | GGATG | 5 cut(s) | 640, 1061, 1274, 1555, 1727 |
| FriOI | GRGCYC | 2 cut(s) | 110, 120 |
| Fsp4HI | GCNGC | 4 cut(s) | 359, 879, 1728, 2103 |
| FspBI | CTAG | 3 cut(s) | 1191, 1902, 2106 |
| GlaI | GCGC | 2 cut(s) | 342, 1691 |
| GluI | GCNGC | 4 cut(s) | 359, 879, 1728, 2103 |
| HaeIII | GGCC | 7 cut(s) | 91, 108, 941, 1404, 1426, 1880, 2089 |
| HapII | CCGG | 4 cut(s) | 92, 1391, 1843, 2009 |
| HhaI | GCGC | 2 cut(s) | 343, 1692 |
| Hin6I | GCGC | 2 cut(s) | 341, 1690 |
| HinP1I | GCGC | 2 cut(s) | 341, 1690 |
| HincII | GTYRAC | 1 cut(s) | 1618 |
| HindII | GTYRAC | 1 cut(s) | 1618 |
| HindIII | AAGCTT | 1 cut(s) | 164 |
| HpaII | CCGG | 4 cut(s) | 92, 1391, 1843, 2009 |
| Hpy166II | GTNNAC | 3 cut(s) | 784, 1447, 1618 |
| Hpy188III | TCNNGA | 6 cut(s) | 320, 1175, 1774, 1970, 2019, 2145 |
| Hpy8I | GTNNAC | 3 cut(s) | 784, 1447, 1618 |
| Hpy99I | CGWCG | 3 cut(s) | 142, 321, 1127 |
| HpyAV | CCTTC | 9 cut(s) | 259, 675, 894, 1213, 1447, 1513, 1748, 1838, 1988 |
| HpyCH4III | ACNGT | 7 cut(s) | 410, 733, 1172, 1591, 1639, 2032, 2113 |
| HpyCH4IV | ACGT | 3 cut(s) | 137, 316, 524 |
| HpyCH4V | TGCA | 8 cut(s) | 314, 640, 813, 1265, 1634, 1649, 1661, 2040 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 42, 286, 1196 |
| HpyF3I | CTNAG | 9 cut(s) | 510, 590, 612, 758, 849, 904, 1008, 1069, 1555 |
| HpySE526I | ACGT | 3 cut(s) | 137, 316, 524 |
| HspAI | GCGC | 2 cut(s) | 341, 1690 |
| KflI | GGGWCCC | 1 cut(s) | 153 |
| Ksp22I | TGATCA | 1 cut(s) | 604 |
| Kzo9I | GATC | 7 cut(s) | 50, 54, 604, 900, 1253, 1378, 2079 |
| LguI | GCTCTTC | 1 cut(s) | 108 |
| LmnI | GCTCC | 2 cut(s) | 793, 886 |
| Lsp1109I | GCAGC | 4 cut(s) | 370, 890, 1714, 2114 |
| LweI | GCATC | 6 cut(s) | 139, 172, 227, 316, 1047, 1252 |
| MaeI | CTAG | 3 cut(s) | 1191, 1902, 2106 |
| MaeII | ACGT | 3 cut(s) | 137, 316, 524 |
| MaeIII | GTNAC | 3 cut(s) | 1466, 1952, 2067 |
| MalI | GATC | 7 cut(s) | 52, 56, 606, 902, 1255, 1380, 2081 |
| MboI | GATC | 7 cut(s) | 50, 54, 604, 900, 1253, 1378, 2079 |
| MfeI | CAATTG | 1 cut(s) | 720 |
| MflI | RGATCY | 1 cut(s) | 900 |
| MhlI | GDGCHC | 4 cut(s) | 110, 120, 925, 1536 |
| MlsI | TGGCCA | 1 cut(s) | 1880 |
| MluNI | TGGCCA | 1 cut(s) | 1880 |
| MlyI | GAGTC | 5 cut(s) | 860, 1019, 1025, 1319, 2021 |
| MmeI | TCCRAC | 2 cut(s) | 1596, 1692 |
| Mox20I | TGGCCA | 1 cut(s) | 1880 |
| Mph1103I | ATGCAT | 1 cut(s) | 1651 |
| MroXI | GAANNNNTTC | 1 cut(s) | 679 |
| MscI | TGGCCA | 1 cut(s) | 1880 |
| MseI | TTAA | 4 cut(s) | 225, 698, 1511, 1781 |
| MslI | CAYNNNNRTG | 4 cut(s) | 534, 1149, 1648, 2045 |
| Msp20I | TGGCCA | 1 cut(s) | 1880 |
| MspA1I | CMGCKG | 1 cut(s) | 361 |
| MspI | CCGG | 4 cut(s) | 92, 1391, 1843, 2009 |
| MspR9I | CCNGG | 8 cut(s) | 93, 483, 1333, 1351, 1391, 1460, 1814, 1843 |
| MunI | CAATTG | 1 cut(s) | 720 |
| MvaI | CCWGG | 5 cut(s) | 483, 1333, 1351, 1460, 1814 |
| MvnI | CGCG | 1 cut(s) | 1690 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 42, 286, 1196 |
| NciI | CCSGG | 3 cut(s) | 93, 1391, 1843 |
| NdeII | GATC | 7 cut(s) | 50, 54, 604, 900, 1253, 1378, 2079 |
| NlaIV | GGNNCC | 7 cut(s) | 108, 154, 155, 1535, 1826, 2023, 2090 |
| NmeAIII | GCCGAG | 2 cut(s) | 961, 1452 |
| NsiI | ATGCAT | 1 cut(s) | 1651 |
| NspI | RCATGY | 2 cut(s) | 622, 1649 |
| PaeI | GCATGC | 1 cut(s) | 622 |
| PagI | TCATGA | 2 cut(s) | 1174, 2144 |
| PasI | CCCWGGG | 1 cut(s) | 1813 |
| PceI | AGGCCT | 1 cut(s) | 941 |
| PciSI | GCTCTTC | 1 cut(s) | 108 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 134 |
| PdmI | GAANNNNTTC | 1 cut(s) | 679 |
| PfeI | GAWTC | 9 cut(s) | 23, 272, 860, 980, 986, 1001, 1022, 1110, 1136 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1082 |
| PkrI | GCNGC | 4 cut(s) | 360, 880, 1729, 2104 |
| Ple19I | CGATCG | 1 cut(s) | 57 |
| PleI | GAGTC | 5 cut(s) | 859, 1018, 1024, 1319, 2020 |
| PpsI | GAGTC | 5 cut(s) | 859, 1018, 1024, 1319, 2020 |
| PpuMI | RGGWCCY | 1 cut(s) | 153 |
| PshAI | GACNNNNGTC | 2 cut(s) | 158, 648 |
| Psp124BI | GAGCTC | 1 cut(s) | 120 |
| Psp5II | RGGWCCY | 1 cut(s) | 153 |
| Psp6I | CCWGG | 5 cut(s) | 481, 1331, 1349, 1458, 1812 |
| PspGI | CCWGG | 5 cut(s) | 481, 1331, 1349, 1458, 1812 |
| PspN4I | GGNNCC | 7 cut(s) | 108, 154, 155, 1535, 1826, 2023, 2090 |
| PspOMI | GGGCCC | 1 cut(s) | 106 |
| PspPI | GGNCC | 8 cut(s) | 106, 107, 153, 551, 1292, 1456, 2021, 2088 |
| PspPPI | RGGWCCY | 1 cut(s) | 153 |
| PsuI | RGATCY | 1 cut(s) | 900 |
| PvuI | CGATCG | 1 cut(s) | 57 |
| PvuII | CAGCTG | 1 cut(s) | 361 |
| RsaI | GTAC | 7 cut(s) | 19, 31, 200, 730, 1361, 1433, 2110 |
| RsaNI | GTAC | 7 cut(s) | 18, 30, 199, 729, 1360, 1432, 2109 |
| RseI | CAYNNNNRTG | 4 cut(s) | 534, 1149, 1648, 2045 |
| SacI | GAGCTC | 1 cut(s) | 120 |
| SapI | GCTCTTC | 1 cut(s) | 108 |
| SaqAI | TTAA | 4 cut(s) | 225, 698, 1511, 1781 |
| SatI | GCNGC | 4 cut(s) | 359, 879, 1728, 2103 |
| Sau3AI | GATC | 7 cut(s) | 50, 54, 604, 900, 1253, 1378, 2079 |
| Sau96I | GGNCC | 8 cut(s) | 106, 107, 153, 551, 1292, 1456, 2021, 2088 |
| ScaI | AGTACT | 1 cut(s) | 1361 |
| SchI | GAGTC | 5 cut(s) | 860, 1019, 1025, 1319, 2021 |
| ScrFI | CCNGG | 8 cut(s) | 93, 483, 1333, 1351, 1391, 1460, 1814, 1843 |
| SduI | GDGCHC | 4 cut(s) | 110, 120, 925, 1536 |
| SfaNI | GCATC | 6 cut(s) | 139, 172, 227, 316, 1047, 1252 |
| SfcI | CTRYAG | 2 cut(s) | 1168, 2031 |
| SinI | GGWCC | 5 cut(s) | 153, 551, 1292, 1456, 2021 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 534, 1149, 1648, 2045 |
| SmlI | CTYRAG | 2 cut(s) | 350, 2072 |
| SmoI | CTYRAG | 2 cut(s) | 350, 2072 |
| SphI | GCATGC | 1 cut(s) | 622 |
| SseBI | AGGCCT | 1 cut(s) | 941 |
| SsiI | CCGC | 5 cut(s) | 123, 240, 549, 1237, 1688 |
| SspMI | CTAG | 3 cut(s) | 1191, 1902, 2106 |
| SstI | GAGCTC | 1 cut(s) | 120 |
| StuI | AGGCCT | 1 cut(s) | 941 |
| StyD4I | CCNGG | 8 cut(s) | 91, 481, 1331, 1349, 1389, 1458, 1812, 1841 |
| StyI | CCWWGG | 1 cut(s) | 864 |
| TaaI | ACNGT | 7 cut(s) | 410, 733, 1172, 1591, 1639, 2032, 2113 |
| TaiI | ACGT | 3 cut(s) | 140, 319, 527 |
| TaqI | TCGA | 6 cut(s) | 53, 235, 319, 1328, 1681, 1928 |
| TatI | WGTACW | 1 cut(s) | 1359 |
| TfiI | GAWTC | 9 cut(s) | 23, 272, 860, 980, 986, 1001, 1022, 1110, 1136 |
| Tru1I | TTAA | 4 cut(s) | 225, 698, 1511, 1781 |
| Tru9I | TTAA | 4 cut(s) | 225, 698, 1511, 1781 |
| TscAI | CASTG | 2 cut(s) | 193, 1858 |
| TseI | GCWGC | 4 cut(s) | 358, 878, 1727, 2102 |
| TspGWI | ACGGA | 3 cut(s) | 35, 801, 1287 |
| TspRI | CASTG | 2 cut(s) | 193, 1858 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1082 |
| VpaK11BI | GGWCC | 5 cut(s) | 153, 551, 1292, 1456, 2021 |
| XapI | RAATTY | 5 cut(s) | 487, 1598, 1783, 1945, 2140 |
| XceI | RCATGY | 2 cut(s) | 622, 1649 |
| XmiI | GTMKAC | 1 cut(s) | 1446 |
| XmnI | GAANNNNTTC | 1 cut(s) | 679 |
| XspI | CTAG | 3 cut(s) | 1191, 1902, 2106 |
| ZrmI | AGTACT | 1 cut(s) | 1361 |
| Zsp2I | ATGCAT | 1 cut(s) | 1651 |