tissue development
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05900 AT3G05900 |
| fragaria_vesca | FvH4_4g21781 |
| malus_domestica | MD13G1136900.v1.1 MD16G1132300.v1.1 |
| prunus_persica | Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 |
| pyrus_communis | pycom13g11930 pycom16g11670 |
| rosa_chinensis | RchiOBHm_Chr4g0428021 |
| rosa_laevigata | RLG00000007189 |
| rosa_multiflora | Rmu_sc0005263.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00369710 |
| rosa_rugosa | Rorug04G0221100 Rorug04G0221200 |
| rosa_samantha | Rh4AG278600 Rh4BG284000 Rh4CG299900 Rh4DG281300 Rh5BG077300 Rh5BG081000 |
| rosa_wichuraiana | Rw4G024220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 743, 1032 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 493 |
| AciI | CCGC | 2 cut(s) | 527, 1700 |
| AclI | AACGTT | 1 cut(s) | 408 |
| AclWI | GGATC | 1 cut(s) | 438 |
| AcsI | RAATTY | 1 cut(s) | 954 |
| AcuI | CTGAAG | 8 cut(s) | 501, 843, 1023, 1197, 1245, 1419, 1545, 2013 |
| AcyI | GRCGYC | 2 cut(s) | 740, 1029 |
| AfaI | GTAC | 3 cut(s) | 1134, 1308, 1482 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 493, 994 |
| AgsI | TTSAA | 8 cut(s) | 147, 362, 512, 569, 656, 719, 1726, 1902 |
| Alw21I | GWGCWC | 1 cut(s) | 947 |
| AlwI | GGATC | 1 cut(s) | 438 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1823 |
| AoxI | GGCC | 3 cut(s) | 1041, 1389, 1563 |
| ApeKI | GCWGC | 6 cut(s) | 1109, 1187, 1190, 1655, 1760, 1763 |
| ApoI | RAATTY | 1 cut(s) | 954 |
| AsuC2I | CCSGG | 1 cut(s) | 152 |
| AsuHPI | GGTGA | 7 cut(s) | 73, 133, 151, 204, 206, 299, 1933 |
| BaeGI | GKGCMC | 1 cut(s) | 1295 |
| BbsI | GAAGAC | 2 cut(s) | 426, 1362 |
| Bbv12I | GWGCWC | 1 cut(s) | 947 |
| BbvI | GCAGC | 6 cut(s) | 1096, 1174, 1177, 1667, 1747, 1775 |
| BccI | CCATC | 3 cut(s) | 76, 1258, 1432 |
| BceAI | ACGGC | 1 cut(s) | 1289 |
| BclI | TGATCA | 1 cut(s) | 178 |
| BcnI | CCSGG | 1 cut(s) | 152 |
| BfaI | CTAG | 1 cut(s) | 1652 |
| BfmI | CTRYAG | 4 cut(s) | 111, 261, 675, 1761 |
| BglII | AGATCT | 1 cut(s) | 1964 |
| BisI | GCNGC | 6 cut(s) | 1110, 1188, 1191, 1656, 1761, 1764 |
| BlpI | GCTNAGC | 1 cut(s) | 1887 |
| BlsI | GCNGC | 6 cut(s) | 1111, 1189, 1192, 1657, 1762, 1765 |
| Bme1390I | CCNGG | 1 cut(s) | 152 |
| BmiI | GGNNCC | 2 cut(s) | 498, 1782 |
| BmrFI | CCNGG | 1 cut(s) | 152 |
| BmsI | GCATC | 2 cut(s) | 146, 514 |
| BpiI | GAAGAC | 2 cut(s) | 426, 1362 |
| BpmI | CTGGAG | 3 cut(s) | 645, 884, 1527 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1887 |
| BpuEI | CTTGAG | 2 cut(s) | 785, 872 |
| BpuMI | CCSGG | 1 cut(s) | 152 |
| Bsa29I | ATCGAT | 1 cut(s) | 1839 |
| BsaHI | GRCGYC | 2 cut(s) | 740, 1029 |
| BsaJI | CCNNGG | 1 cut(s) | 399 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 228, 258 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 493, 994 |
| Bse118I | RCCGGY | 1 cut(s) | 133 |
| Bse1I | ACTGG | 1 cut(s) | 500 |
| BseCI | ATCGAT | 1 cut(s) | 1839 |
| BseDI | CCNNGG | 1 cut(s) | 399 |
| BseGI | GGATG | 6 cut(s) | 874, 1075, 1249, 1264, 1438, 1612 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 493, 994 |
| BseMII | CTCAG | 7 cut(s) | 773, 939, 1113, 1287, 1341, 1461, 1512 |
| BseNI | ACTGG | 1 cut(s) | 500 |
| BseRI | GAGGAG | 3 cut(s) | 185, 452, 704 |
| BseSI | GKGCMC | 1 cut(s) | 1295 |
| BseXI | GCAGC | 6 cut(s) | 1096, 1174, 1177, 1667, 1747, 1775 |
| BshFI | GGCC | 3 cut(s) | 1043, 1391, 1565 |
| BshVI | ATCGAT | 1 cut(s) | 1839 |
| BsiHKAI | GWGCWC | 1 cut(s) | 947 |
| BsiSI | CCGG | 2 cut(s) | 134, 152 |
| BslFI | GGGAC | 2 cut(s) | 1102, 1450 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 493, 994 |
| BsmBI | CGTCTC | 6 cut(s) | 434, 587, 731, 1002, 1176, 1524 |
| BsmFI | GGGAC | 2 cut(s) | 1102, 1450 |
| BsnI | GGCC | 3 cut(s) | 1043, 1391, 1565 |
| Bsp1286I | GDGCHC | 2 cut(s) | 947, 1295 |
| Bsp143I | GATC | 4 cut(s) | 178, 430, 1836, 1964 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1887 |
| BspACI | CCGC | 2 cut(s) | 527, 1700 |
| BspANI | GGCC | 3 cut(s) | 1043, 1391, 1565 |
| BspCNI | CTCAG | 7 cut(s) | 772, 940, 1114, 1288, 1342, 1462, 1511 |
| BspDI | ATCGAT | 1 cut(s) | 1839 |
| BspLI | GGNNCC | 2 cut(s) | 498, 1782 |
| BspMAI | CTGCAG | 3 cut(s) | 115, 679, 1765 |
| BspPI | GGATC | 1 cut(s) | 438 |
| BsrFI | RCCGGY | 1 cut(s) | 133 |
| BsrI | ACTGG | 1 cut(s) | 500 |
| BssAI | RCCGGY | 1 cut(s) | 133 |
| BssECI | CCNNGG | 1 cut(s) | 399 |
| BssMI | GATC | 4 cut(s) | 178, 430, 1836, 1964 |
| BssNI | GRCGYC | 2 cut(s) | 740, 1029 |
| Bst4CI | ACNGT | 7 cut(s) | 28, 271, 287, 343, 367, 400, 553 |
| Bst6I | CTCTTC | 9 cut(s) | 162, 222, 381, 534, 585, 1047, 1221, 1395, 1710 |
| BstACI | GRCGYC | 2 cut(s) | 740, 1029 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 683, 1826 |
| BstDSI | CCRYGG | 1 cut(s) | 399 |
| BstEII | GGTNACC | 1 cut(s) | 157 |
| BstF5I | GGATG | 6 cut(s) | 874, 1075, 1249, 1264, 1438, 1612 |
| BstKTI | GATC | 4 cut(s) | 181, 433, 1839, 1967 |
| BstMBI | GATC | 4 cut(s) | 178, 430, 1836, 1964 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 533, 683, 1196, 1826, 1949 |
| BstNSI | RCATGY | 3 cut(s) | 1064, 1412, 1586 |
| BstPI | GGTNACC | 1 cut(s) | 157 |
| BstSCI | CCNGG | 1 cut(s) | 150 |
| BstSFI | CTRYAG | 4 cut(s) | 111, 261, 675, 1761 |
| BstSLI | GKGCMC | 1 cut(s) | 1295 |
| BstV1I | GCAGC | 6 cut(s) | 1096, 1174, 1177, 1667, 1747, 1775 |
| BstV2I | GAAGAC | 2 cut(s) | 426, 1362 |
| BstX2I | RGATCY | 1 cut(s) | 1964 |
| BstYI | RGATCY | 1 cut(s) | 1964 |
| Bsu15I | ATCGAT | 1 cut(s) | 1839 |
| BsuRI | GGCC | 3 cut(s) | 1043, 1391, 1565 |
| BsuTUI | ATCGAT | 1 cut(s) | 1839 |
| BtgI | CCRYGG | 1 cut(s) | 399 |
| BtsCI | GGATG | 6 cut(s) | 874, 1075, 1249, 1264, 1438, 1612 |
| BtsI | GCAGTG | 1 cut(s) | 225 |
| BtsIMutI | CAGTG | 3 cut(s) | 225, 276, 981 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1823 |
| Cfr10I | RCCGGY | 1 cut(s) | 133 |
| ClaI | ATCGAT | 1 cut(s) | 1839 |
| CseI | GACGC | 2 cut(s) | 1019, 1193 |
| Csp6I | GTAC | 3 cut(s) | 1133, 1307, 1481 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 135, 170 |
| CviAII | CATG | 4 cut(s) | 278, 1061, 1409, 1583 |
| CviQI | GTAC | 3 cut(s) | 1133, 1307, 1481 |
| DpnI | GATC | 4 cut(s) | 180, 432, 1838, 1966 |
| DpnII | GATC | 4 cut(s) | 178, 430, 1836, 1964 |
| Eam1104I | CTCTTC | 9 cut(s) | 162, 222, 381, 534, 585, 1047, 1221, 1395, 1710 |
| EarI | CTCTTC | 9 cut(s) | 162, 222, 381, 534, 585, 1047, 1221, 1395, 1710 |
| Eco32I | GATATC | 1 cut(s) | 1378 |
| Eco57I | CTGAAG | 8 cut(s) | 501, 843, 1023, 1197, 1245, 1419, 1545, 2013 |
| Eco91I | GGTNACC | 1 cut(s) | 157 |
| EcoO65I | GGTNACC | 1 cut(s) | 157 |
| EcoRV | GATATC | 1 cut(s) | 1378 |
| Esp3I | CGTCTC | 6 cut(s) | 434, 587, 731, 1002, 1176, 1524 |
| FaeI | CATG | 4 cut(s) | 281, 1064, 1412, 1586 |
| FaiI | YATR | 8 cut(s) | 279, 426, 992, 1062, 1236, 1410, 1584, 1913 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 297, 329, 834, 866, 1096, 1128 |
| FaqI | GGGAC | 2 cut(s) | 1102, 1450 |
| FatI | CATG | 4 cut(s) | 277, 1060, 1408, 1582 |
| FbaI | TGATCA | 1 cut(s) | 178 |
| Fnu4HI | GCNGC | 6 cut(s) | 1110, 1188, 1191, 1656, 1761, 1764 |
| FokI | GGATG | 6 cut(s) | 881, 1082, 1256, 1271, 1445, 1619 |
| Fsp4HI | GCNGC | 6 cut(s) | 1110, 1188, 1191, 1656, 1761, 1764 |
| FspBI | CTAG | 1 cut(s) | 1652 |
| GluI | GCNGC | 6 cut(s) | 1110, 1188, 1191, 1656, 1761, 1764 |
| GsuI | CTGGAG | 3 cut(s) | 645, 884, 1527 |
| HaeIII | GGCC | 3 cut(s) | 1043, 1391, 1565 |
| HapII | CCGG | 2 cut(s) | 134, 152 |
| HgaI | GACGC | 2 cut(s) | 1019, 1193 |
| Hin1I | GRCGYC | 2 cut(s) | 740, 1029 |
| Hin1II | CATG | 4 cut(s) | 281, 1064, 1412, 1586 |
| HpaII | CCGG | 2 cut(s) | 134, 152 |
| HphI | GGTGA | 7 cut(s) | 73, 133, 151, 204, 206, 299, 1933 |
| Hpy166II | GTNNAC | 1 cut(s) | 197 |
| Hpy188III | TCNNGA | 3 cut(s) | 434, 716, 1675 |
| Hpy8I | GTNNAC | 1 cut(s) | 197 |
| Hpy99I | CGWCG | 1 cut(s) | 106 |
| HpyCH4III | ACNGT | 7 cut(s) | 28, 271, 287, 343, 367, 400, 553 |
| HpyCH4IV | ACGT | 6 cut(s) | 408, 740, 1029, 1359, 1533, 1620 |
| HpyCH4V | TGCA | 6 cut(s) | 113, 347, 677, 686, 1460, 1763 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 533, 683, 1196, 1826, 1949 |
| HpySE526I | ACGT | 6 cut(s) | 408, 740, 1029, 1359, 1533, 1620 |
| Hsp92I | GRCGYC | 2 cut(s) | 740, 1029 |
| Hsp92II | CATG | 4 cut(s) | 281, 1064, 1412, 1586 |
| Ksp22I | TGATCA | 1 cut(s) | 178 |
| Kzo9I | GATC | 4 cut(s) | 178, 430, 1836, 1964 |
| LmnI | GCTCC | 4 cut(s) | 236, 296, 1198, 1885 |
| Lsp1109I | GCAGC | 6 cut(s) | 1096, 1174, 1177, 1667, 1747, 1775 |
| LweI | GCATC | 2 cut(s) | 146, 514 |
| MaeI | CTAG | 1 cut(s) | 1652 |
| MaeII | ACGT | 6 cut(s) | 408, 740, 1029, 1359, 1533, 1620 |
| MaeIII | GTNAC | 4 cut(s) | 28, 157, 1642, 1864 |
| MalI | GATC | 4 cut(s) | 180, 432, 1838, 1966 |
| MboI | GATC | 4 cut(s) | 178, 430, 1836, 1964 |
| MflI | RGATCY | 1 cut(s) | 1964 |
| MhlI | GDGCHC | 2 cut(s) | 947, 1295 |
| MluCI | AATT | 4 cut(s) | 779, 873, 954, 1785 |
| MlyI | GAGTC | 3 cut(s) | 751, 884, 1490 |
| MmeI | TCCRAC | 4 cut(s) | 47, 84, 214, 511 |
| MseI | TTAA | 6 cut(s) | 315, 333, 354, 519, 1601, 1938 |
| MspA1I | CMGCKG | 3 cut(s) | 623, 821, 1547 |
| MspI | CCGG | 2 cut(s) | 134, 152 |
| MspR9I | CCNGG | 1 cut(s) | 152 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 533, 683, 1196, 1826, 1949 |
| NciI | CCSGG | 1 cut(s) | 152 |
| NdeII | GATC | 4 cut(s) | 178, 430, 1836, 1964 |
| NlaIII | CATG | 4 cut(s) | 281, 1064, 1412, 1586 |
| NlaIV | GGNNCC | 2 cut(s) | 498, 1782 |
| NmuCI | GTSAC | 2 cut(s) | 157, 1864 |
| NspI | RCATGY | 3 cut(s) | 1064, 1412, 1586 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 493 |
| PkrI | GCNGC | 6 cut(s) | 1111, 1189, 1192, 1657, 1762, 1765 |
| PleI | GAGTC | 3 cut(s) | 751, 884, 1490 |
| PpsI | GAGTC | 3 cut(s) | 751, 884, 1490 |
| Psp1406I | AACGTT | 1 cut(s) | 408 |
| PspEI | GGTNACC | 1 cut(s) | 157 |
| PspN4I | GGNNCC | 2 cut(s) | 498, 1782 |
| PstI | CTGCAG | 3 cut(s) | 115, 679, 1765 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1823 |
| PsuI | RGATCY | 1 cut(s) | 1964 |
| PvuII | CAGCTG | 3 cut(s) | 623, 821, 1547 |
| RsaI | GTAC | 3 cut(s) | 1134, 1308, 1482 |
| RsaNI | GTAC | 3 cut(s) | 1133, 1307, 1481 |
| SaqAI | TTAA | 6 cut(s) | 315, 333, 354, 519, 1601, 1938 |
| SatI | GCNGC | 6 cut(s) | 1110, 1188, 1191, 1656, 1761, 1764 |
| Sau3AI | GATC | 4 cut(s) | 178, 430, 1836, 1964 |
| SchI | GAGTC | 3 cut(s) | 751, 884, 1490 |
| ScrFI | CCNGG | 1 cut(s) | 152 |
| SduI | GDGCHC | 2 cut(s) | 947, 1295 |
| SfaNI | GCATC | 2 cut(s) | 146, 514 |
| SfcI | CTRYAG | 4 cut(s) | 111, 261, 675, 1761 |
| SmlI | CTYRAG | 2 cut(s) | 764, 851 |
| SmoI | CTYRAG | 2 cut(s) | 764, 851 |
| Sse9I | AATT | 4 cut(s) | 779, 873, 954, 1785 |
| SsiI | CCGC | 2 cut(s) | 527, 1700 |
| SspMI | CTAG | 1 cut(s) | 1652 |
| StyD4I | CCNGG | 1 cut(s) | 150 |
| TaaI | ACNGT | 7 cut(s) | 28, 271, 287, 343, 367, 400, 553 |
| TaiI | ACGT | 6 cut(s) | 411, 743, 1032, 1362, 1536, 1623 |
| TaqI | TCGA | 5 cut(s) | 723, 962, 1416, 1590, 1839 |
| TasI | AATT | 4 cut(s) | 779, 873, 954, 1785 |
| Tru1I | TTAA | 6 cut(s) | 315, 333, 354, 519, 1601, 1938 |
| Tru9I | TTAA | 6 cut(s) | 315, 333, 354, 519, 1601, 1938 |
| TscAI | CASTG | 3 cut(s) | 225, 276, 988 |
| TseFI | GTSAC | 2 cut(s) | 157, 1864 |
| TseI | GCWGC | 6 cut(s) | 1109, 1187, 1190, 1655, 1760, 1763 |
| Tsp45I | GTSAC | 2 cut(s) | 157, 1864 |
| TspDTI | ATGAA | 6 cut(s) | 489, 927, 1086, 1260, 1275, 1623 |
| TspGWI | ACGGA | 1 cut(s) | 649 |
| TspRI | CASTG | 3 cut(s) | 225, 276, 988 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 493 |
| XapI | RAATTY | 1 cut(s) | 954 |
| XceI | RCATGY | 3 cut(s) | 1064, 1412, 1586 |
| XspI | CTAG | 1 cut(s) | 1652 |
| ZraI | GACGTC | 2 cut(s) | 741, 1030 |