tissue development
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05900 AT3G05900 |
| fragaria_vesca | FvH4_4g21781 |
| malus_domestica | MD13G1136900.v1.1 MD16G1132300.v1.1 |
| prunus_persica | Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 |
| pyrus_communis | pycom13g11930 pycom16g11670 |
| rosa_chinensis | RchiOBHm_Chr4g0428021 |
| rosa_laevigata | RLG00000007189 |
| rosa_multiflora | Rmu_sc0005263.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00369710 |
| rosa_rugosa | Rorug04G0221100 Rorug04G0221200 |
| rosa_samantha | Rh4AG278600 Rh4BG284000 Rh4CG299900 Rh4DG281300 Rh5BG077300 Rh5BG081000 |
| rosa_wichuraiana | Rw4G024220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 230, 1847 |
| AccB1I | GGYRCC | 4 cut(s) | 683, 767, 4850, 5099 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 132, 2471, 2591 |
| AccBSI | CCGCTC | 1 cut(s) | 1083 |
| AccI | GTMKAC | 5 cut(s) | 345, 1354, 4449, 4481, 4973 |
| AccII | CGCG | 4 cut(s) | 491, 508, 510, 785 |
| AccIII | TCCGGA | 1 cut(s) | 5146 |
| AclI | AACGTT | 1 cut(s) | 548 |
| AcsI | RAATTY | 8 cut(s) | 856, 1334, 1735, 2756, 3244, 4087, 4412, 5326 |
| AcuI | CTGAAG | 8 cut(s) | 816, 1482, 1626, 3108, 3680, 4425, 4641, 4896 |
| AcvI | CACGTG | 1 cut(s) | 680 |
| AcyI | GRCGYC | 3 cut(s) | 84, 684, 5100 |
| AflII | CTTAAG | 1 cut(s) | 4799 |
| AflIII | ACRYGT | 1 cut(s) | 5118 |
| AhlI | ACTAGT | 1 cut(s) | 4766 |
| AjiI | CACGTC | 2 cut(s) | 298, 651 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 510, 542 |
| Alw21I | GWGCWC | 3 cut(s) | 1775, 3237, 4741 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1960, 3811, 4784 |
| Ama87I | CYCGRG | 4 cut(s) | 144, 392, 3260, 4196 |
| Aor13HI | TCCGGA | 1 cut(s) | 5146 |
| ApaI | GGGCCC | 1 cut(s) | 399 |
| ApoI | RAATTY | 8 cut(s) | 856, 1334, 1735, 2756, 3244, 4087, 4412, 5326 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 4619, 4651, 5123, 5155 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 464, 935, 5039 |
| AspA2I | CCTAGG | 1 cut(s) | 3868 |
| AsuC2I | CCSGG | 1 cut(s) | 1412 |
| AsuII | TTCGAA | 1 cut(s) | 939 |
| AsuNHI | GCTAGC | 1 cut(s) | 1813 |
| AvaI | CYCGRG | 4 cut(s) | 144, 392, 3260, 4196 |
| AvaII | GGWCC | 5 cut(s) | 316, 1516, 1877, 2001, 4730 |
| AvrII | CCTAGG | 1 cut(s) | 3868 |
| BaeGI | GKGCMC | 1 cut(s) | 399 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 3090, 3123, 4032, 4065 |
| BamHI | GGATCC | 2 cut(s) | 1298, 1310 |
| BanI | GGYRCC | 4 cut(s) | 683, 767, 4850, 5099 |
| BanII | GRGCYC | 3 cut(s) | 399, 1775, 3237 |
| BauI | CACGAG | 1 cut(s) | 2706 |
| BbrPI | CACGTG | 1 cut(s) | 680 |
| BbsI | GAAGAC | 4 cut(s) | 3775, 4107, 4884, 5133 |
| Bbv12I | GWGCWC | 3 cut(s) | 1775, 3237, 4741 |
| BceAI | ACGGC | 3 cut(s) | 57, 681, 3880 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4109, 4143 |
| BciVI | GTATCC | 2 cut(s) | 4999, 5143 |
| BclI | TGATCA | 3 cut(s) | 3934, 5092, 5161 |
| BcnI | CCSGG | 1 cut(s) | 1412 |
| BcuI | ACTAGT | 1 cut(s) | 4766 |
| BfmI | CTRYAG | 7 cut(s) | 1588, 2011, 2731, 3481, 3803, 3981, 4446 |
| BfoI | RGCGCY | 6 cut(s) | 42, 212, 687, 697, 791, 5103 |
| BfrI | CTTAAG | 1 cut(s) | 4799 |
| BfuAI | ACCTGC | 2 cut(s) | 230, 1847 |
| BfuI | GTATCC | 2 cut(s) | 4999, 5143 |
| BglII | AGATCT | 2 cut(s) | 321, 818 |
| BlnI | CCTAGG | 1 cut(s) | 3868 |
| Bme18I | GGWCC | 5 cut(s) | 316, 1516, 1877, 2001, 4730 |
| BmeT110I | CYCGRG | 4 cut(s) | 144, 392, 3260, 4196 |
| BmgBI | CACGTC | 2 cut(s) | 298, 651 |
| BmrI | ACTGGG | 1 cut(s) | 1789 |
| BmtI | GCTAGC | 1 cut(s) | 1817 |
| BmuI | ACTGGG | 1 cut(s) | 1789 |
| BpiI | GAAGAC | 4 cut(s) | 3775, 4107, 4884, 5133 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 127, 159, 2419, 2451 |
| BpmI | CTGGAG | 9 cut(s) | 440, 1130, 1887, 2711, 3006, 3912, 4241, 4952, 5352 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4563 |
| Bpu14I | TTCGAA | 1 cut(s) | 939 |
| BpuEI | CTTGAG | 3 cut(s) | 3758, 4710, 5285 |
| BpuMI | CCSGG | 1 cut(s) | 1412 |
| BsaAI | YACGTR | 2 cut(s) | 680, 3294 |
| BsaBI | GATNNNNATC | 2 cut(s) | 4343, 5319 |
| BsaHI | GRCGYC | 3 cut(s) | 84, 684, 5100 |
| BsaWI | WCCGGW | 2 cut(s) | 659, 5146 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1885, 1915, 2268, 2298 |
| Bse118I | RCCGGY | 2 cut(s) | 770, 4130 |
| Bse3DI | GCAATG | 3 cut(s) | 1748, 2603, 2840 |
| Bse8I | GATNNNNATC | 2 cut(s) | 4343, 5319 |
| BseAI | TCCGGA | 1 cut(s) | 5146 |
| BseJI | GATNNNNATC | 2 cut(s) | 4343, 5319 |
| BseMI | GCAATG | 3 cut(s) | 1748, 2603, 2840 |
| BseRI | GAGGAG | 8 cut(s) | 485, 585, 1030, 1255, 1890, 2357, 3909, 3912 |
| BseSI | GKGCMC | 1 cut(s) | 399 |
| BseYI | CCCAGC | 3 cut(s) | 167, 273, 3922 |
| BsgI | GTGCAG | 6 cut(s) | 205, 242, 435, 2675, 3096, 4440 |
| Bsh1236I | CGCG | 4 cut(s) | 491, 508, 510, 785 |
| BshNI | GGYRCC | 4 cut(s) | 683, 767, 4850, 5099 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1775, 3237, 4741 |
| BsiHKCI | CYCGRG | 4 cut(s) | 144, 392, 3260, 4196 |
| BsiSI | CCGG | 9 cut(s) | 33, 94, 660, 771, 795, 1031, 1411, 4131, 5147 |
| BslFI | GGGAC | 5 cut(s) | 308, 1239, 4366, 4582, 5089 |
| BsmBI | CGTCTC | 1 cut(s) | 4916 |
| BsmFI | GGGAC | 5 cut(s) | 308, 1239, 4366, 4582, 5089 |
| BsmI | GAATGC | 8 cut(s) | 1657, 1996, 2272, 2715, 3353, 3395, 4690, 5041 |
| BsoBI | CYCGRG | 4 cut(s) | 144, 392, 3260, 4196 |
| Bsp119I | TTCGAA | 1 cut(s) | 939 |
| Bsp120I | GGGCCC | 1 cut(s) | 395 |
| Bsp1286I | GDGCHC | 4 cut(s) | 399, 1775, 3237, 4741 |
| Bsp13I | TCCGGA | 1 cut(s) | 5146 |
| Bsp1407I | TGTACA | 2 cut(s) | 2049, 2893 |
| BspEI | TCCGGA | 1 cut(s) | 5146 |
| BspFNI | CGCG | 4 cut(s) | 491, 508, 510, 785 |
| BspHI | TCATGA | 3 cut(s) | 1387, 4321, 4792 |
| BspMI | ACCTGC | 2 cut(s) | 230, 1847 |
| BspOI | GCTAGC | 1 cut(s) | 1817 |
| BspQI | GCTCTTC | 1 cut(s) | 3211 |
| BspT104I | TTCGAA | 1 cut(s) | 939 |
| BspT107I | GGYRCC | 4 cut(s) | 683, 767, 4850, 5099 |
| BspTI | CTTAAG | 1 cut(s) | 4799 |
| BsrBI | CCGCTC | 1 cut(s) | 1083 |
| BsrDI | GCAATG | 3 cut(s) | 1748, 2603, 2840 |
| BsrFI | RCCGGY | 2 cut(s) | 770, 4130 |
| BsrGI | TGTACA | 2 cut(s) | 2049, 2893 |
| BssAI | RCCGGY | 2 cut(s) | 770, 4130 |
| BssNI | GRCGYC | 3 cut(s) | 84, 684, 5100 |
| BssSI | CACGAG | 1 cut(s) | 2706 |
| BssT1I | CCWWGG | 4 cut(s) | 338, 3868, 4818, 5070 |
| Bst2BI | CACGAG | 1 cut(s) | 2706 |
| Bst6I | CTCTTC | 7 cut(s) | 562, 953, 1091, 1844, 3084, 3211, 5235 |
| BstACI | GRCGYC | 3 cut(s) | 84, 684, 5100 |
| BstAFI | CTTAAG | 1 cut(s) | 4799 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1826, 1960 |
| BstAUI | TGTACA | 2 cut(s) | 2049, 2893 |
| BstBAI | YACGTR | 2 cut(s) | 680, 3294 |
| BstBI | TTCGAA | 1 cut(s) | 939 |
| BstC8I | GCNNGC | 8 cut(s) | 57, 235, 254, 1815, 1996, 2789, 3218, 3363 |
| BstEII | GGTNACC | 1 cut(s) | 4133 |
| BstENI | CCTNNNNNAGG | 4 cut(s) | 3872, 3894, 4701, 5280 |
| BstFNI | CGCG | 4 cut(s) | 491, 508, 510, 785 |
| BstH2I | RGCGCY | 6 cut(s) | 42, 212, 687, 697, 791, 5103 |
| BstNSI | RCATGY | 1 cut(s) | 3802 |
| BstPI | GGTNACC | 1 cut(s) | 4133 |
| BstSFI | CTRYAG | 7 cut(s) | 1588, 2011, 2731, 3481, 3803, 3981, 4446 |
| BstSLI | GKGCMC | 1 cut(s) | 399 |
| BstUI | CGCG | 4 cut(s) | 491, 508, 510, 785 |
| BstV2I | GAAGAC | 4 cut(s) | 3775, 4107, 4884, 5133 |
| BstX2I | RGATCY | 8 cut(s) | 321, 818, 1298, 1310, 1457, 2474, 2739, 4148 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3030, 4145 |
| BstYI | RGATCY | 8 cut(s) | 321, 818, 1298, 1310, 1457, 2474, 2739, 4148 |
| BsuI | GTATCC | 2 cut(s) | 4999, 5143 |
| BtgZI | GCGATG | 2 cut(s) | 1269, 1467 |
| BtrI | CACGTC | 2 cut(s) | 298, 651 |
| BtsI | GCAGTG | 7 cut(s) | 3034, 4214, 4253, 4444, 4452, 4496, 5394 |
| BveI | ACCTGC | 2 cut(s) | 230, 1847 |
| Cac8I | GCNNGC | 8 cut(s) | 57, 235, 254, 1815, 1996, 2789, 3218, 3363 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1960, 3811, 4784 |
| CciI | TCATGA | 3 cut(s) | 1387, 4321, 4792 |
| Cfr10I | RCCGGY | 2 cut(s) | 770, 4130 |
| CseI | GACGC | 4 cut(s) | 73, 739, 2108, 5000 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3043, 3078 |
| DinI | GGCGCC | 2 cut(s) | 685, 5101 |
| Eam1104I | CTCTTC | 7 cut(s) | 562, 953, 1091, 1844, 3084, 3211, 5235 |
| EarI | CTCTTC | 7 cut(s) | 562, 953, 1091, 1844, 3084, 3211, 5235 |
| EciI | GGCGGA | 3 cut(s) | 274, 634, 1138 |
| Ecl136II | GAGCTC | 2 cut(s) | 1773, 3235 |
| Eco130I | CCWWGG | 4 cut(s) | 338, 3868, 4818, 5070 |
| Eco147I | AGGCCT | 1 cut(s) | 2017 |
| Eco24I | GRGCYC | 3 cut(s) | 399, 1775, 3237 |
| Eco47I | GGWCC | 5 cut(s) | 316, 1516, 1877, 2001, 4730 |
| Eco53kI | GAGCTC | 2 cut(s) | 1773, 3235 |
| Eco57I | CTGAAG | 8 cut(s) | 816, 1482, 1626, 3108, 3680, 4425, 4641, 4896 |
| Eco72I | CACGTG | 1 cut(s) | 680 |
| Eco88I | CYCGRG | 4 cut(s) | 144, 392, 3260, 4196 |
| Eco91I | GGTNACC | 1 cut(s) | 4133 |
| EcoICRI | GAGCTC | 2 cut(s) | 1773, 3235 |
| EcoNI | CCTNNNNNAGG | 4 cut(s) | 3872, 3894, 4701, 5280 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2555, 4730, 5256 |
| EcoO65I | GGTNACC | 1 cut(s) | 4133 |
| EcoRI | GAATTC | 1 cut(s) | 856 |
| EcoT14I | CCWWGG | 4 cut(s) | 338, 3868, 4818, 5070 |
| EcoT22I | ATGCAT | 3 cut(s) | 1308, 2851, 3705 |
| EcoT38I | GRGCYC | 3 cut(s) | 399, 1775, 3237 |
| EgeI | GGCGCC | 2 cut(s) | 685, 5101 |
| EheI | GGCGCC | 2 cut(s) | 685, 5101 |
| ErhI | CCWWGG | 4 cut(s) | 338, 3868, 4818, 5070 |
| Esp3I | CGTCTC | 1 cut(s) | 4916 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1911, 1943 |
| FaqI | GGGAC | 5 cut(s) | 308, 1239, 4366, 4582, 5089 |
| FauI | CCCGC | 3 cut(s) | 1288, 3209, 4567 |
| FauNDI | CATATG | 2 cut(s) | 2487, 5359 |
| FbaI | TGATCA | 3 cut(s) | 3934, 5092, 5161 |
| FblI | GTMKAC | 5 cut(s) | 345, 1354, 4449, 4481, 4973 |
| FriOI | GRGCYC | 3 cut(s) | 399, 1775, 3237 |
| GsaI | CCCAGC | 3 cut(s) | 171, 277, 3926 |
| GsuI | CTGGAG | 9 cut(s) | 440, 1130, 1887, 2711, 3006, 3912, 4241, 4952, 5352 |
| HaeII | RGCGCY | 6 cut(s) | 42, 212, 687, 697, 791, 5103 |
| HapII | CCGG | 9 cut(s) | 33, 94, 660, 771, 795, 1031, 1411, 4131, 5147 |
| HgaI | GACGC | 4 cut(s) | 73, 739, 2108, 5000 |
| Hin1I | GRCGYC | 3 cut(s) | 84, 684, 5100 |
| HincII | GTYRAC | 6 cut(s) | 1366, 2196, 2902, 3409, 4764, 4860 |
| HindII | GTYRAC | 6 cut(s) | 1366, 2196, 2902, 3409, 4764, 4860 |
| HindIII | AAGCTT | 5 cut(s) | 406, 1685, 2513, 3014, 4545 |
| HpaI | GTTAAC | 2 cut(s) | 2196, 4860 |
| HpaII | CCGG | 9 cut(s) | 33, 94, 660, 771, 795, 1031, 1411, 4131, 5147 |
| Hpy99I | CGWCG | 5 cut(s) | 78, 81, 293, 755, 2673 |
| Hsp92I | GRCGYC | 3 cut(s) | 84, 684, 5100 |
| KasI | GGCGCC | 2 cut(s) | 683, 5099 |
| Kpn2I | TCCGGA | 1 cut(s) | 5146 |
| Ksp22I | TGATCA | 3 cut(s) | 3934, 5092, 5161 |
| KspAI | GTTAAC | 2 cut(s) | 2196, 4860 |
| LguI | GCTCTTC | 1 cut(s) | 3211 |
| MbiI | CCGCTC | 1 cut(s) | 1083 |
| MfeI | CAATTG | 3 cut(s) | 2639, 3687, 4650 |
| MflI | RGATCY | 8 cut(s) | 321, 818, 1298, 1310, 1457, 2474, 2739, 4148 |
| MhlI | GDGCHC | 4 cut(s) | 399, 1775, 3237, 4741 |
| Mly113I | GGCGCC | 2 cut(s) | 684, 5100 |
| MmeI | TCCRAC | 3 cut(s) | 4605, 5103, 5109 |
| Mph1103I | ATGCAT | 3 cut(s) | 1308, 2851, 3705 |
| MroI | TCCGGA | 1 cut(s) | 5146 |
| MroXI | GAANNNNTTC | 3 cut(s) | 464, 935, 5039 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2445, 3945, 3972 |
| MspA1I | CMGCKG | 2 cut(s) | 1465, 1709 |
| MspCI | CTTAAG | 1 cut(s) | 4799 |
| MspI | CCGG | 9 cut(s) | 33, 94, 660, 771, 795, 1031, 1411, 4131, 5147 |
| MunI | CAATTG | 3 cut(s) | 2639, 3687, 4650 |
| Mva1269I | GAATGC | 8 cut(s) | 1657, 1996, 2272, 2715, 3353, 3395, 4690, 5041 |
| MvnI | CGCG | 4 cut(s) | 491, 508, 510, 785 |
| NarI | GGCGCC | 2 cut(s) | 684, 5100 |
| NciI | CCSGG | 1 cut(s) | 1412 |
| NdeI | CATATG | 2 cut(s) | 2487, 5359 |
| NheI | GCTAGC | 1 cut(s) | 1813 |
| NmeAIII | GCCGAG | 3 cut(s) | 711, 1038, 4879 |
| NmuCI | GTSAC | 8 cut(s) | 474, 773, 2255, 2906, 3146, 3297, 3590, 4133 |
| NsiI | ATGCAT | 3 cut(s) | 1308, 2851, 3705 |
| NspI | RCATGY | 1 cut(s) | 3802 |
| NspV | TTCGAA | 1 cut(s) | 939 |
| PaeR7I | CTCGAG | 2 cut(s) | 144, 4196 |
| PagI | TCATGA | 3 cut(s) | 1387, 4321, 4792 |
| PceI | AGGCCT | 1 cut(s) | 2017 |
| PciSI | GCTCTTC | 1 cut(s) | 3211 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 76, 294 |
| PctI | GAATGC | 8 cut(s) | 1657, 1996, 2272, 2715, 3353, 3395, 4690, 5041 |
| PdmI | GAANNNNTTC | 3 cut(s) | 464, 935, 5039 |
| PflFI | GACNNNGTC | 1 cut(s) | 4357 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 132, 2471, 2591 |
| PfoI | TCCNGGA | 1 cut(s) | 5187 |
| PluTI | GGCGCC | 2 cut(s) | 687, 5103 |
| PmaCI | CACGTG | 1 cut(s) | 680 |
| PmlI | CACGTG | 1 cut(s) | 680 |
| Ppu21I | YACGTR | 2 cut(s) | 680, 3294 |
| PpuMI | RGGWCCY | 1 cut(s) | 4730 |
| Psp124BI | GAGCTC | 2 cut(s) | 1775, 3237 |
| Psp1406I | AACGTT | 1 cut(s) | 548 |
| Psp5II | RGGWCCY | 1 cut(s) | 4730 |
| PspCI | CACGTG | 1 cut(s) | 680 |
| PspEI | GGTNACC | 1 cut(s) | 4133 |
| PspFI | CCCAGC | 3 cut(s) | 167, 273, 3922 |
| PspOMI | GGGCCC | 1 cut(s) | 395 |
| PspPPI | RGGWCCY | 1 cut(s) | 4730 |
| PspXI | VCTCGAGB | 1 cut(s) | 144 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2018, 2050 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1960, 3811, 4784 |
| PsuI | RGATCY | 8 cut(s) | 321, 818, 1298, 1310, 1457, 2474, 2739, 4148 |
| PsyI | GACNNNGTC | 1 cut(s) | 4357 |
| PvuII | CAGCTG | 2 cut(s) | 1465, 1709 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2445, 3945, 3972 |
| SacI | GAGCTC | 2 cut(s) | 1775, 3237 |
| SapI | GCTCTTC | 1 cut(s) | 3211 |
| SduI | GDGCHC | 4 cut(s) | 399, 1775, 3237, 4741 |
| SfcI | CTRYAG | 7 cut(s) | 1588, 2011, 2731, 3481, 3803, 3981, 4446 |
| SfoI | GGCGCC | 2 cut(s) | 685, 5101 |
| Sfr274I | CTCGAG | 2 cut(s) | 144, 4196 |
| SfuI | TTCGAA | 1 cut(s) | 939 |
| SinI | GGWCC | 5 cut(s) | 316, 1516, 1877, 2001, 4730 |
| SlaI | CTCGAG | 2 cut(s) | 144, 4196 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2445, 3945, 3972 |
| SmlI | CTYRAG | 6 cut(s) | 144, 3737, 4196, 4725, 4799, 5264 |
| SmoI | CTYRAG | 6 cut(s) | 144, 3737, 4196, 4725, 4799, 5264 |
| SpeI | ACTAGT | 1 cut(s) | 4766 |
| SseBI | AGGCCT | 1 cut(s) | 2017 |
| SspDI | GGCGCC | 2 cut(s) | 683, 5099 |
| SspI | AATATT | 1 cut(s) | 4285 |
| SstI | GAGCTC | 2 cut(s) | 1775, 3237 |
| StuI | AGGCCT | 1 cut(s) | 2017 |
| StyI | CCWWGG | 4 cut(s) | 338, 3868, 4818, 5070 |
| TatI | WGTACW | 6 cut(s) | 595, 1485, 2049, 2525, 2893, 5115 |
| TauI | GCSGC | 7 cut(s) | 39, 153, 252, 259, 759, 788, 3536 |
| TseFI | GTSAC | 8 cut(s) | 474, 773, 2255, 2906, 3146, 3297, 3590, 4133 |
| Tsp45I | GTSAC | 8 cut(s) | 474, 773, 2255, 2906, 3146, 3297, 3590, 4133 |
| TspGWI | ACGGA | 7 cut(s) | 278, 690, 792, 1984, 2270, 3430, 4940 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4357 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 132, 2471, 2591 |
| Vha464I | CTTAAG | 1 cut(s) | 4799 |
| VpaK11BI | GGWCC | 5 cut(s) | 316, 1516, 1877, 2001, 4730 |
| XagI | CCTNNNNNAGG | 4 cut(s) | 3872, 3894, 4701, 5280 |
| XapI | RAATTY | 8 cut(s) | 856, 1334, 1735, 2756, 3244, 4087, 4412, 5326 |
| XbaI | TCTAGA | 2 cut(s) | 4663, 4918 |
| XceI | RCATGY | 1 cut(s) | 3802 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1526 |
| XhoI | CTCGAG | 2 cut(s) | 144, 4196 |
| XmaJI | CCTAGG | 1 cut(s) | 3868 |
| XmiI | GTMKAC | 5 cut(s) | 345, 1354, 4449, 4481, 4973 |
| XmnI | GAANNNNTTC | 3 cut(s) | 464, 935, 5039 |
| Zsp2I | ATGCAT | 3 cut(s) | 1308, 2851, 3705 |