MD13G1136900.v1.1

Belongs to the arginase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
10527706 .. 10530621
2916 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1136900.v1.1.491

Sequence Viewer

Length: 1785 bp
ATGTGTTTATATCTAGGGAATTTTGTTTCCTTGGTTTATCATTTTTGGCAGGTCTGTAGCTCTCTATCTTCAACCGATGTAAAACACACCGGTTTTTCTTCACAGCCAATTGTGGAAAAAGTTCATGAAGAAACAGATGCAGTTAATGGGAGTGATAGTCCTCCTCCACCCAAACCTGATGAGAAGAAGGATGAAAAGGAAGAGCTTGTAGCAGAGAGCTCTGTTGGTTCAGAGGTTTCTGCAACCAAGGTTGAAGAAACACCAGTGGACAACGATAACCAGACAGAGACTCCTGTCGTTGTTGAGGCTGAGAAGATTGATGATGATGTTCCGGTCGAAGCTGCCTCGAAAGAGATTGAAAGTTCTGATAAGGAGCCAGAGCAATCATCCACAAAAGACTCAGCCAGTGAAGCTGTTGAAGCAGTTGAAAGTGTACCAGTGGAGAAACCAGCAGTTGAGTCAGTTGAAGATAAACCAGTGGAGAAAAAAGAAGAGAAGGCAGAAGCTATTGAAGCAGATGAGAAGCCAACTAGTGGAACAGCTGAAGCAGTTGAGAAAGAAGCAGATGAGAAGCCATCTAGCGAAAAAACTGAAGAAGTTGAGAAAGAGGTAGATGAGAAAAAGGCAGTGGAGAATGTAGCAATTGAAGAAGTTGACAAAGAAGCAGAGAAGGATCAACCTATTGAAGCAGTTGAGAAGGAAGCAGAGAAGGATCAAGCTATTGAAGCAGTTGAGAAAGAAGCCGAAAAGATGGAAGTAATTGAAGAAGCAGATGAGAAAAAACCAGTGGAGAATGTAGCAGCAACTGAAGAAGTTGAGAAAGAAGCAGATGAGAAAAAACCGGTGGAGATTGTAGCAACTGAAGAAGTTGAGAAAGAAGCAGAGAAGAATCAAACTATTGAAACAGTTGAGAAAGAACCCGAAAAGAAGGAAGCAATCGAAGTAGATGATGAGAAGAAACCAGATATTGAAGTAGTTGAGAAACAGATAGATGATGGGAAGCCAAATGTTGAAGCTTTCGAGGCTAACTCATCAACTGAAGAAGCAGCTGATCAGCCAGCGGAGGAGCCTGTCAAAACTTCTCTTGTCAAAGGTTCAGAATCTGTAAATGAAGTAGTGGAGGGCAAGCAACATGAACAGTTGAAAGATTTATTAGAGATGGAAAGAAATGTTGAGAAGGAACTCAAACCTGAAGAAAATGCTGCCACTGATAGCTCTGTGCCAACCGTTGAGGAAGCACAGACAATTGAGAAAGAAGCCGAGAAAGACGCTGCAGTTACTAATGTAGAAAAGCCGGTTGCTGAGAAGACCGAAAAAGAAGCAGGACAAAATGCTGCAGAGAAGGATGAGGAGAAGAAGATTGAAAAAACAGAACAAGAAACTGAAGGGAATATTGAGAAGACTGGTGAAAATGTTACACAAGTTGCTGATAGAGATTTAGTCACGGCGAAAGAGGTAGTATTGGAGAAAGAGGAAGAGTACAAGGACATTAAAGAGCATGAAGTTGTAGTTGAGCCTTCTGCTGCCATTGTTGAACAGGAAAGCAAATTGGAGAAAACCGAAGAAGCGAAAAATGAGCCCGCTGCCGAGAGTCTTGAGGCCTCCAAAGAGGAGGCCAGGCAAGAGGTTGCAGTAAAAGCACAAAAGCAGTCAGGTGGGATCATTTCCAAGGTGAAGCAGTCCATTGTGAAGGTGAAAAAAGCGATTATTGGGAAATCTCCAAGCTCAAAAGTGCTTTCACCAGCACCAGAAGCCAAAGCAGATGAACAAGTCAGTGTCAAGTAG

Protein Analysis

595

Amino Acids

65.24

Weight (kDa)

4.39

Isoelectric Point (pI)

52.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 40
AccB7I CCANNNNNTGG 1 cut(s) 533
AciI CCGC 2 cut(s) 1061, 1581
AclWI GGATC 3 cut(s) 681, 720, 1667
AcsI RAATTY 1 cut(s) 19
AcuI CTGAAG 7 cut(s) 564, 612, 828, 882, 1059, 1212, 1404
AfaI GTAC 2 cut(s) 435, 1481
AfiI CCNNNNNNNGG 1 cut(s) 533
AgeI ACCGGT 2 cut(s) 89, 841
AhlI ACTAGT 1 cut(s) 530
AjnI CCWGG 1 cut(s) 1616
Alw21I GWGCWC 1 cut(s) 221
Alw26I GTCTC 1 cut(s) 281
AlwI GGATC 3 cut(s) 681, 720, 1667
AlwNI CAGNNNCTG 2 cut(s) 806, 1103
AoxI GGCC 2 cut(s) 1599, 1614
ApeKI GCWGC 8 cut(s) 341, 800, 1046, 1202, 1271, 1334, 1523, 1583
ApoI RAATTY 1 cut(s) 19
AsiGI ACCGGT 2 cut(s) 89, 841
Asp700I GAANNNNTTC 1 cut(s) 120
AsuHPI GGTGA 4 cut(s) 1418, 1684, 1705, 1731
BanII GRGCYC 2 cut(s) 221, 1581
BbsI GAAGAC 2 cut(s) 1313, 1406
Bbv12I GWGCWC 1 cut(s) 221
BbvI GCAGC 8 cut(s) 328, 812, 1058, 1189, 1258, 1321, 1510, 1570
BccI CCATC 4 cut(s) 583, 745, 989, 1153
BceAI ACGGC 1 cut(s) 1461
BciT130I CCWGG 1 cut(s) 1618
BclI TGATCA 1 cut(s) 1051
BcoDI GTCTC 1 cut(s) 281
BcuI ACTAGT 1 cut(s) 530
BfaI CTAG 3 cut(s) 14, 531, 579
BfmI CTRYAG 3 cut(s) 55, 1272, 1335
BfuAI ACCTGC 1 cut(s) 40
BisI GCNGC 8 cut(s) 342, 801, 1047, 1203, 1272, 1335, 1524, 1584
BlsI GCNGC 8 cut(s) 343, 802, 1048, 1204, 1273, 1336, 1525, 1585
Bme1390I CCNGG 1 cut(s) 1618
BmiI GGNNCC 2 cut(s) 375, 1068
BmrFI CCNGG 1 cut(s) 1618
BmsI GCATC 1 cut(s) 127
BoxI GACNNNNGTC 1 cut(s) 293
BpiI GAAGAC 2 cut(s) 1313, 1406
BplI GAGNNNNNCTC 2 cut(s) 1013, 1045
BpuEI CTTGAG 1 cut(s) 1616
BsaJI CCNNGG 3 cut(s) 30, 246, 1668
BsaWI WCCGGW 3 cut(s) 89, 331, 841
BsaXI ACNNNNNCTCC 4 cut(s) 142, 172, 274, 304
Bsc4I CCNNNNNNNGG 1 cut(s) 533
Bse118I RCCGGY 3 cut(s) 89, 841, 1294
Bse1I ACTGG 6 cut(s) 263, 405, 437, 476, 785, 1408
BseBI CCWGG 1 cut(s) 1618
BseDI CCNNGG 3 cut(s) 30, 246, 1668
BseGI GGATG 3 cut(s) 196, 386, 1351
BseLI CCNNNNNNNGG 1 cut(s) 533
BseMII CTCAG 3 cut(s) 300, 414, 1293
BseNI ACTGG 6 cut(s) 263, 405, 437, 476, 785, 1408
BseRI GAGGAG 4 cut(s) 153, 1079, 1364, 1625
BseXI GCAGC 8 cut(s) 328, 812, 1058, 1189, 1258, 1321, 1510, 1570
Bsh1285I CGRYCG 1 cut(s) 336
BshFI GGCC 2 cut(s) 1601, 1616
BshTI ACCGGT 2 cut(s) 89, 841
BsiEI CGRYCG 1 cut(s) 336
BsiHKAI GWGCWC 1 cut(s) 221
BsiSI CCGG 4 cut(s) 90, 332, 842, 1295
BslI CCNNNNNNNGG 1 cut(s) 533
BsmAI GTCTC 1 cut(s) 281
BsnI GGCC 2 cut(s) 1601, 1616
Bsp1286I GDGCHC 2 cut(s) 221, 1581
Bsp143I GATC 4 cut(s) 673, 712, 1051, 1659
BspACI CCGC 2 cut(s) 1061, 1581
BspANI GGCC 2 cut(s) 1601, 1616
BspCNI CTCAG 3 cut(s) 301, 413, 1294
BspHI TCATGA 1 cut(s) 124
BspLI GGNNCC 2 cut(s) 375, 1068
BspMAI CTGCAG 2 cut(s) 1276, 1339
BspMI ACCTGC 1 cut(s) 40
BspPI GGATC 3 cut(s) 681, 720, 1667
BspQI GCTCTTC 1 cut(s) 195
BsrFI RCCGGY 3 cut(s) 89, 841, 1294
BsrI ACTGG 6 cut(s) 263, 405, 437, 476, 785, 1408
BssAI RCCGGY 3 cut(s) 89, 841, 1294
BssECI CCNNGG 3 cut(s) 30, 246, 1668
BssMI GATC 4 cut(s) 673, 712, 1051, 1659
BssT1I CCWWGG 3 cut(s) 30, 246, 1668
Bst2UI CCWGG 1 cut(s) 1618
Bst4CI ACNGT 3 cut(s) 907, 1140, 1228
Bst6I CTCTTC 3 cut(s) 195, 486, 1470
BstC8I GCNNGC 3 cut(s) 1059, 1127, 1581
BstDEI CTNAG 3 cut(s) 309, 400, 1302
BstF5I GGATG 3 cut(s) 196, 386, 1351
BstKTI GATC 4 cut(s) 676, 715, 1054, 1662
BstMAI GTCTC 1 cut(s) 281
BstMBI GATC 4 cut(s) 673, 712, 1051, 1659
BstMCI CGRYCG 1 cut(s) 336
BstMWI GCNNNNNNNGC 7 cut(s) 410, 419, 512, 725, 1022, 1637, 1751
BstNI CCWGG 1 cut(s) 1618
BstPAI GACNNNNGTC 1 cut(s) 293
BstSCI CCNGG 1 cut(s) 1616
BstSFI CTRYAG 3 cut(s) 55, 1272, 1335
BstV1I GCAGC 8 cut(s) 328, 812, 1058, 1189, 1258, 1321, 1510, 1570
BstV2I GAAGAC 2 cut(s) 1313, 1406
BsuRI GGCC 2 cut(s) 1601, 1616
BtsCI GGATG 3 cut(s) 196, 386, 1351
BtsI GCAGTG 1 cut(s) 633
BtsIMutI CAGTG 8 cut(s) 270, 412, 444, 483, 633, 792, 1206, 1780
BveI ACCTGC 1 cut(s) 40
Cac8I GCNNGC 3 cut(s) 1059, 1127, 1581
CaiI CAGNNNCTG 2 cut(s) 806, 1103
CciI TCATGA 1 cut(s) 124
Cfr10I RCCGGY 3 cut(s) 89, 841, 1294
CseI GACGC 1 cut(s) 1277
Csp6I GTAC 2 cut(s) 434, 1480
CspAI ACCGGT 2 cut(s) 89, 841
CviAII CATG 3 cut(s) 125, 1133, 1499
CviQI GTAC 2 cut(s) 434, 1480
DdeI CTNAG 3 cut(s) 309, 400, 1302
DpnI GATC 4 cut(s) 675, 714, 1053, 1661
DpnII GATC 4 cut(s) 673, 712, 1051, 1659
Eam1104I CTCTTC 3 cut(s) 195, 486, 1470
EarI CTCTTC 3 cut(s) 195, 486, 1470
Ecl136II GAGCTC 1 cut(s) 219
Eco130I CCWWGG 3 cut(s) 30, 246, 1668
Eco147I AGGCCT 1 cut(s) 1601
Eco24I GRGCYC 2 cut(s) 221, 1581
Eco53kI GAGCTC 1 cut(s) 219
Eco57I CTGAAG 7 cut(s) 564, 612, 828, 882, 1059, 1212, 1404
EcoICRI GAGCTC 1 cut(s) 219
EcoRII CCWGG 1 cut(s) 1616
EcoT14I CCWWGG 3 cut(s) 30, 246, 1668
EcoT38I GRGCYC 2 cut(s) 221, 1581
ErhI CCWWGG 3 cut(s) 30, 246, 1668
FaeI CATG 3 cut(s) 128, 1136, 1502
FaiI YATR 4 cut(s) 10, 126, 1134, 1500
FatI CATG 3 cut(s) 124, 1132, 1498
FauI CCCGC 1 cut(s) 1588
FbaI TGATCA 1 cut(s) 1051
Fnu4HI GCNGC 8 cut(s) 342, 801, 1047, 1203, 1272, 1335, 1524, 1584
FokI GGATG 3 cut(s) 203, 373, 1358
FriOI GRGCYC 2 cut(s) 221, 1581
Fsp4HI GCNGC 8 cut(s) 342, 801, 1047, 1203, 1272, 1335, 1524, 1584
FspBI CTAG 3 cut(s) 14, 531, 579
GluI GCNGC 8 cut(s) 342, 801, 1047, 1203, 1272, 1335, 1524, 1584
HaeIII GGCC 2 cut(s) 1601, 1616
HapII CCGG 4 cut(s) 90, 332, 842, 1295
HgaI GACGC 1 cut(s) 1277
Hin1II CATG 3 cut(s) 128, 1136, 1502
HincII GTYRAC 1 cut(s) 655
HindII GTYRAC 1 cut(s) 655
HindIII AAGCTT 1 cut(s) 1014
HinfI GANTC 6 cut(s) 289, 398, 458, 889, 1100, 1591
HpaII CCGG 4 cut(s) 90, 332, 842, 1295
HphI GGTGA 4 cut(s) 1418, 1684, 1705, 1731
Hpy166II GTNNAC 3 cut(s) 268, 434, 655
Hpy188I TCNGA 3 cut(s) 232, 367, 1099
Hpy188III TCNNGA 2 cut(s) 125, 1595
Hpy8I GTNNAC 3 cut(s) 268, 434, 655
HpyCH4III ACNGT 3 cut(s) 907, 1140, 1228
HpyCH4V TGCA 5 cut(s) 140, 242, 1274, 1337, 1631
HpyF10VI GCNNNNNNNGC 7 cut(s) 410, 419, 512, 725, 1022, 1637, 1751
HpyF3I CTNAG 3 cut(s) 309, 400, 1302
Hsp92II CATG 3 cut(s) 128, 1136, 1502
Ksp22I TGATCA 1 cut(s) 1051
Kzo9I GATC 4 cut(s) 673, 712, 1051, 1659
LguI GCTCTTC 1 cut(s) 195
LmnI GCTCC 2 cut(s) 373, 1066
Lsp1109I GCAGC 8 cut(s) 328, 812, 1058, 1189, 1258, 1321, 1510, 1570
LweI GCATC 1 cut(s) 127
MaeI CTAG 3 cut(s) 14, 531, 579
MaeIII GTNAC 3 cut(s) 1276, 1414, 1441
MalI GATC 4 cut(s) 675, 714, 1053, 1661
MboI GATC 4 cut(s) 673, 712, 1051, 1659
MfeI CAATTG 3 cut(s) 108, 642, 1245
MhlI GDGCHC 2 cut(s) 221, 1581
MluCI AATT 6 cut(s) 19, 108, 642, 759, 1245, 1547
MlyI GAGTC 4 cut(s) 283, 392, 467, 1600
MroXI GAANNNNTTC 1 cut(s) 120
MseI TTAA 2 cut(s) 144, 1491
MspA1I CMGCKG 4 cut(s) 542, 1049, 1061, 1583
MspI CCGG 4 cut(s) 90, 332, 842, 1295
MspR9I CCNGG 1 cut(s) 1618
MunI CAATTG 3 cut(s) 108, 642, 1245
MvaI CCWGG 1 cut(s) 1618
MwoI GCNNNNNNNGC 7 cut(s) 410, 419, 512, 725, 1022, 1637, 1751
NdeII GATC 4 cut(s) 673, 712, 1051, 1659
NlaIII CATG 3 cut(s) 128, 1136, 1502
NlaIV GGNNCC 2 cut(s) 375, 1068
NmeAIII GCCGAG 2 cut(s) 1285, 1612
NmuCI GTSAC 1 cut(s) 1441
PagI TCATGA 1 cut(s) 124
PceI AGGCCT 1 cut(s) 1601
PciSI GCTCTTC 1 cut(s) 195
PdmI GAANNNNTTC 1 cut(s) 120
PfeI GAWTC 2 cut(s) 889, 1100
PflMI CCANNNNNTGG 1 cut(s) 533
PinAI ACCGGT 2 cut(s) 89, 841
PkrI GCNGC 8 cut(s) 343, 802, 1048, 1204, 1273, 1336, 1525, 1585
PleI GAGTC 4 cut(s) 283, 392, 466, 1599
PpsI GAGTC 4 cut(s) 283, 392, 466, 1599
PshAI GACNNNNGTC 1 cut(s) 293
Psp124BI GAGCTC 1 cut(s) 221
Psp6I CCWGG 1 cut(s) 1616
PspGI CCWGG 1 cut(s) 1616
PspN4I GGNNCC 2 cut(s) 375, 1068
PstI CTGCAG 2 cut(s) 1276, 1339
PstNI CAGNNNCTG 2 cut(s) 806, 1103
PvuII CAGCTG 2 cut(s) 542, 1049
RsaI GTAC 2 cut(s) 435, 1481
RsaNI GTAC 2 cut(s) 434, 1480
SacI GAGCTC 1 cut(s) 221
SapI GCTCTTC 1 cut(s) 195
SaqAI TTAA 2 cut(s) 144, 1491
SatI GCNGC 8 cut(s) 342, 801, 1047, 1203, 1272, 1335, 1524, 1584
Sau3AI GATC 4 cut(s) 673, 712, 1051, 1659
SchI GAGTC 4 cut(s) 283, 392, 467, 1600
ScrFI CCNGG 1 cut(s) 1618
SduI GDGCHC 2 cut(s) 221, 1581
SfaNI GCATC 1 cut(s) 127
SfcI CTRYAG 3 cut(s) 55, 1272, 1335
SmlI CTYRAG 1 cut(s) 1595
SmoI CTYRAG 1 cut(s) 1595
SpeI ACTAGT 1 cut(s) 530
Sse9I AATT 6 cut(s) 19, 108, 642, 759, 1245, 1547
SseBI AGGCCT 1 cut(s) 1601
SsiI CCGC 2 cut(s) 1061, 1581
SspI AATATT 1 cut(s) 1393
SspMI CTAG 3 cut(s) 14, 531, 579
SstI GAGCTC 1 cut(s) 221
StuI AGGCCT 1 cut(s) 1601
StyD4I CCNGG 1 cut(s) 1616
StyI CCWWGG 3 cut(s) 30, 246, 1668
TaaI ACNGT 3 cut(s) 907, 1140, 1228
TaqI TCGA 4 cut(s) 336, 347, 939, 1020
TaqII GACCGA 1 cut(s) 1325
TasI AATT 6 cut(s) 19, 108, 642, 759, 1245, 1547
TatI WGTACW 1 cut(s) 1479
TfiI GAWTC 2 cut(s) 889, 1100
Tru1I TTAA 2 cut(s) 144, 1491
Tru9I TTAA 2 cut(s) 144, 1491
TscAI CASTG 8 cut(s) 270, 412, 444, 483, 633, 792, 1213, 1780
TseFI GTSAC 1 cut(s) 1441
TseI GCWGC 8 cut(s) 341, 800, 1046, 1202, 1271, 1334, 1523, 1583
Tsp45I GTSAC 1 cut(s) 1441
TspDTI ATGAA 7 cut(s) 113, 141, 207, 1125, 1149, 1515, 1779
TspRI CASTG 8 cut(s) 270, 412, 444, 483, 633, 792, 1213, 1780
Van91I CCANNNNNTGG 1 cut(s) 533
XapI RAATTY 1 cut(s) 19
XmnI GAANNNNTTC 1 cut(s) 120
XspI CTAG 3 cut(s) 14, 531, 579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.