Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007817

Physical Location & Seq

Genomic Coordinates Reverse (-)

22260116 .. 22263634

Gene Structure 3519 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G208400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGCTCTTTATCCTTTCATTTCTATTTGCCTCTCTGTTTCTTGAAACTCAACTGACAAAACATATTCTTTTTCTTCTTCTTCTTCTTCTTCTTGAATCTCATCTCATAGCCATCATGTCTACTGAGACTATTGTTGCATCTGTTCCTGCTGATGATCAGCCAATTGAGGGAAAGGTGCATGAAGAAATAACACATGCAAGCAAAGAGATTGAAAGTCTTCCATCCAAGGATGATGGAAAAAAGGATGAAAAAGATCTTGTAGTTGTAGCAGAGAAATCTGATGGTTCAGAGTCTCAGTTAATTTCAAGTATGTCTGAAGAAACATCAGAGAATAACCAGACGGAGCATCCTATCGTTGTCGAAGGCCAGGTTGATCATGTTCCAGTCGAAGTGGGCGCGAAAGAGGTTGAGAGTTCTGATCAGGATCCAGAAGCATCAATCACAAAAGACTTGGCCAGTGAAGCTGTTGCAAGCCAAGCAGATGAGAGTCTAACAATTGAAAATGTTCCAGTGGAGAAACCAGCAGTTGAATCAGTTGAAAATACACTAGTGGAGAAAGTAGCAACTGAAGCAGTTGAGGAAGAAGCAGAGAAGGCACAAACTGTTGAAGTAGATGAGGATAAACCAGTGGAGATAGTAGGAATTGAAGAAGCTGAGAAAGAAGCAGAGAAGGCAGAAACTATGGAAGCAGCTGAAAACAAACCAGTGGAGGAAATAGCAATTGAAGAAGCTGAGAAGGAAGCAGAGAAGGCGGAAACTATTGAAGCAGCTGAAAACAAAACAGTGGAGGAAGTAGCAACTGAAGAAGCTGAGAAAGAAGAAGAGAAGGCAGAAACTATTGAAGCAGCTGAAAACAAACCAGTGGAGGAAGTAGCAATTGAAGAAGCTGAGAAAGAAGCAGAGAAGGCAGAAACTATTGAAGCTTATGAGAATAAACTAGTGGAGACAATTGAAACTGAGGCAGTTGAGAAAGAAGCAGAGCAGACACAAGCAATGGAAGCAGAAGAGAATAAACCAGAGGAGAAGCCAGCTACTGAGCCAGTTGAAAAACAGATAGATGATGAGAAGCCAAAGGTTGAAGCTTCTGAGGCTGATCCATCAACTGAAGCAGCTGGTCAGGCAGTGGAGGAAACCTTGGAAACATCTCTTGTCAAAGATTCAGAACCAGTAAATGAAGTGGAGGGTAAACCACATGAACAGTTGAAAGTTTTATTAGAGATGGAGAGAAATATTGAGAAGGTACTCAAGCCTGAAGAAAATGTTGCCACTGACTCTGTCCCAGCCATTGAGGAAGCTCAAGCAAATGAAAAAGTATCTCATGTTGCTGAGAATGCAGAGAAAGAAGCAGGTGTGGTTGATGAGGTTGGAAAGTTGTTGAAGGATGAGACTGAGGTGAGTGAAAATGCTGCAGTGGAAGAAGAAAAGATTGTCAAAACAGAACAAGAAACTGAGGAGAAAATTGAAAAGACTGAGGCAAAGAAAACTGAGGATGATAATAAGCTTGAAAATGTTGCAGAAGTTGCTGATAGAGAATTGGGTGAGGCTAAAGAGGTACTGGTCAAAGAAGATGTGTACAAGGACATCAAAGAGAATGAAGAGGTGGTTGTGCCTTCTGCCATTGTTGAACCTGTAGTAGAAGCCAAGGCTGGGGATGATGCTAGTAAGTTGGAAAATACAGAAGAAACTGCAAATGAGTCAAAAACTGAGCCTGAGACTCTTGAGGCTTCCAAAGATCAGGAAAAGCAAGATGTTTCAGTGAAAGCAGCACAAAAGCAATCAGGTGGCATCATATCAAAGGTGAAACAATCTATTGTGAAGGTGAAGAAAGCTATCATTGGGAAATCTCCCAGCTCAAAAGTCCTCTCACCTGAGGTCAAAGCAGAGGAACCTGTCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004053 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006525 GO:0006527 GO:0006560 GO:0006570 GO:0006576 GO:0006591 GO:0006595 GO:0006596 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008783 GO:0009056 GO:0009058 GO:0009063 GO:0009064 GO:0009065 GO:0009072 GO:0009308 GO:0009309 GO:0009445 GO:0009446 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0016054 GO:0016787 GO:0016810 GO:0016813 GO:0019752 GO:0033388 GO:0033389 GO:0034641 GO:0042401 GO:0042742 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044271 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046395 GO:0046483 GO:0046872 GO:0046914 GO:0050832 GO:0050896 GO:0050897 GO:0051704 GO:0051707 GO:0071704 GO:0097164 GO:0098542 GO:1901360 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

ko00220 ko00330 ko01100 ko01110 ko01130 ko01230 ko05146 map00220 map00330 map01100 map01110 map01130 map01230 map05146

Pfam Domains

Protein Families

Arginase

Protein Analysis

633

Amino Acids

69.2

Weight (kDa)

4.29

Isoelectric Point (pI)

57.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007817)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05900 AT3G05900
fragaria_vesca	FvH4_4g21781
malus_domestica	MD13G1136900.v1.1 MD16G1132300.v1.1
prunus_persica	Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1
pyrus_communis	pycom13g11930 pycom16g11670
rosa_chinensis	RchiOBHm_Chr4g0428021
rosa_laevigata	RLG00000007189
rosa_multiflora	Rmu_sc0005263.1_g000009
rosa_roxburghii	Rroxscaffold_5G00369710
rosa_rugosa	Rorug04G0221100 Rorug04G0221200
rosa_samantha	Rh4AG278600 Rh4BG284000 Rh4CG299900 Rh4DG281300 Rh5BG077300 Rh5BG081000
rosa_wichuraiana	Rw4G024220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1337
Acc36I	ACCTGC	1 cut(s)	1337
AccI	GTMKAC	1 cut(s)	119
AccII	CGCG	1 cut(s)	398
AciI	CCGC	1 cut(s)	752
AclWI	GGATC	3 cut(s)	419, 432, 1088
AcoI	YGGCCR	1 cut(s)	453
AcuI	CTGAAG	5 cut(s)	336, 588, 822, 1125, 1272
AfaI	GTAC	3 cut(s)	1242, 1554, 1574
AfiI	CCNNNNNNNGG	2 cut(s)	167, 1647
AhlI	ACTAGT	2 cut(s)	547, 937
AjnI	CCWGG	1 cut(s)	366
Alw26I	GTCTC	5 cut(s)	119, 297, 938, 1379, 1706
AlwI	GGATC	3 cut(s)	419, 432, 1088
AlwNI	CAGNNNCTG	1 cut(s)	1034
AoxI	GGCC	2 cut(s)	364, 453
ApeKI	GCWGC	6 cut(s)	689, 767, 845, 1109, 1406, 1763
Asp700I	GAANNNNTTC	2 cut(s)	216, 504
AspLEI	GCGC	1 cut(s)	398
AsuHPI	GGTGA	5 cut(s)	1405, 1550, 1810, 1831, 1857
AxyI	CCTNAGG	1 cut(s)	1869
BalI	TGGCCA	1 cut(s)	455
BamHI	GGATCC	1 cut(s)	424
BbsI	GAAGAC	1 cut(s)	209
BbvI	GCAGC	6 cut(s)	701, 779, 857, 1121, 1393, 1775
BccI	CCATC	6 cut(s)	119, 227, 229, 275, 1105, 1213
BciT130I	CCWGG	1 cut(s)	368
BclI	TGATCA	3 cut(s)	154, 373, 418
BcoDI	GTCTC	5 cut(s)	119, 297, 938, 1379, 1706
BcuI	ACTAGT	2 cut(s)	547, 937
BfaI	CTAG	3 cut(s)	548, 938, 1659
BfmI	CTRYAG	2 cut(s)	1407, 1629
BfuAI	ACCTGC	1 cut(s)	1337
BglII	AGATCT	1 cut(s)	253
BisI	GCNGC	6 cut(s)	690, 768, 846, 1110, 1407, 1764
BlsI	GCNGC	6 cut(s)	691, 769, 847, 1111, 1408, 1765
Bme1390I	CCNGG	1 cut(s)	368
BmiI	GGNNCC	2 cut(s)	426, 1887
BmrFI	CCNGG	1 cut(s)	368
BmsI	GCATC	5 cut(s)	146, 355, 443, 1645, 1794
BpiI	GAAGAC	1 cut(s)	209
BpuEI	CTTGAG	3 cut(s)	1229, 1281, 1739
BsaBI	GATNNNNATC	1 cut(s)	423
BsaJI	CCNNGG	3 cut(s)	225, 1134, 1641
Bsc4I	CCNNNNNNNGG	2 cut(s)	167, 1647
Bse1I	ACTGG	9 cut(s)	383, 456, 509, 626, 704, 860, 1040, 1166, 1560
Bse21I	CCTNAGG	1 cut(s)	1869
Bse3DI	GCAATG	1 cut(s)	999
Bse8I	GATNNNNATC	1 cut(s)	423
BseBI	CCWGG	1 cut(s)	368
BseDI	CCNNGG	3 cut(s)	225, 1134, 1641
BseGI	GGATG	7 cut(s)	221, 235, 250, 346, 1387, 1495, 1657
BseJI	GATNNNNATC	1 cut(s)	423
BseLI	CCNNNNNNNGG	2 cut(s)	167, 1647
BseMI	GCAATG	1 cut(s)	999
BseNI	ACTGG	9 cut(s)	383, 456, 509, 626, 704, 860, 1040, 1166, 1560
BseRI	GAGGAG	2 cut(s)	1034, 1466
BseXI	GCAGC	6 cut(s)	701, 779, 857, 1121, 1393, 1775
BseYI	CCCAGC	3 cut(s)	1279, 1646, 1847
Bsh1236I	CGCG	1 cut(s)	398
BshFI	GGCC	2 cut(s)	366, 455
BslFI	GGGAC	1 cut(s)	1262
BslI	CCNNNNNNNGG	2 cut(s)	167, 1647
BsmAI	GTCTC	5 cut(s)	119, 297, 938, 1379, 1706
BsmFI	GGGAC	1 cut(s)	1262
BsmI	GAATGC	1 cut(s)	1336
BsnI	GGCC	2 cut(s)	366, 455
Bsp1407I	TGTACA	1 cut(s)	1572
Bsp143I	GATC	7 cut(s)	154, 253, 373, 418, 424, 1093, 1732
BspACI	CCGC	1 cut(s)	752
BspANI	GGCC	2 cut(s)	366, 455
BspFNI	CGCG	1 cut(s)	398
BspLI	GGNNCC	2 cut(s)	426, 1887
BspMAI	CTGCAG	1 cut(s)	1411
BspMI	ACCTGC	1 cut(s)	1337
BspPI	GGATC	3 cut(s)	419, 432, 1088
BsrDI	GCAATG	1 cut(s)	999
BsrGI	TGTACA	1 cut(s)	1572
BsrI	ACTGG	9 cut(s)	383, 456, 509, 626, 704, 860, 1040, 1166, 1560
BssECI	CCNNGG	3 cut(s)	225, 1134, 1641
BssMI	GATC	7 cut(s)	154, 253, 373, 418, 424, 1093, 1732
BssT1I	CCWWGG	3 cut(s)	225, 1134, 1641
Bst2UI	CCWGG	1 cut(s)	368
Bst4CI	ACNGT	3 cut(s)	604, 784, 1200
Bst6I	CTCTTC	3 cut(s)	816, 999, 1590
BstAPI	GCANNNNNTGC	1 cut(s)	1520
BstAUI	TGTACA	1 cut(s)	1572
BstC8I	GCNNGC	3 cut(s)	199, 472, 1029
BstF5I	GGATG	7 cut(s)	221, 235, 250, 346, 1387, 1495, 1657
BstFNI	CGCG	1 cut(s)	398
BstHHI	GCGC	1 cut(s)	398
BstKTI	GATC	7 cut(s)	157, 256, 376, 421, 427, 1096, 1735
BstMAI	GTCTC	5 cut(s)	119, 297, 938, 1379, 1706
BstMBI	GATC	7 cut(s)	154, 253, 373, 418, 424, 1093, 1732
BstNI	CCWGG	1 cut(s)	368
BstNSI	RCATGY	1 cut(s)	197
BstSCI	CCNGG	1 cut(s)	366
BstSFI	CTRYAG	2 cut(s)	1407, 1629
BstUI	CGCG	1 cut(s)	398
BstV1I	GCAGC	6 cut(s)	701, 779, 857, 1121, 1393, 1775
BstV2I	GAAGAC	1 cut(s)	209
BstX2I	RGATCY	2 cut(s)	253, 424
BstYI	RGATCY	2 cut(s)	253, 424
Bsu36I	CCTNAGG	1 cut(s)	1869
BsuRI	GGCC	2 cut(s)	366, 455
BtsCI	GGATG	7 cut(s)	221, 235, 250, 346, 1387, 1495, 1657
BtsI	GCAGTG	2 cut(s)	1128, 1416
BveI	ACCTGC	1 cut(s)	1337
Cac8I	GCNNGC	3 cut(s)	199, 472, 1029
CaiI	CAGNNNCTG	1 cut(s)	1034
CfoI	GCGC	1 cut(s)	398
Csp6I	GTAC	3 cut(s)	1241, 1553, 1573
CviAII	CATG	6 cut(s)	115, 179, 194, 377, 1193, 1319
CviQI	GTAC	3 cut(s)	1241, 1553, 1573
DpnI	GATC	7 cut(s)	156, 255, 375, 420, 426, 1095, 1734
DpnII	GATC	7 cut(s)	154, 253, 373, 418, 424, 1093, 1732
EaeI	YGGCCR	1 cut(s)	453
Eam1104I	CTCTTC	3 cut(s)	816, 999, 1590
EarI	CTCTTC	3 cut(s)	816, 999, 1590
EciI	GGCGGA	1 cut(s)	767
Eco130I	CCWWGG	3 cut(s)	225, 1134, 1641
Eco57I	CTGAAG	5 cut(s)	336, 588, 822, 1125, 1272
Eco81I	CCTNAGG	1 cut(s)	1869
EcoRII	CCWGG	1 cut(s)	366
EcoT14I	CCWWGG	3 cut(s)	225, 1134, 1641
ErhI	CCWWGG	3 cut(s)	225, 1134, 1641
FaeI	CATG	6 cut(s)	118, 182, 197, 380, 1196, 1322
FaqI	GGGAC	1 cut(s)	1262
FatI	CATG	6 cut(s)	114, 178, 193, 376, 1192, 1318
FbaI	TGATCA	3 cut(s)	154, 373, 418
FblI	GTMKAC	1 cut(s)	119
Fnu4HI	GCNGC	6 cut(s)	690, 768, 846, 1110, 1407, 1764
FokI	GGATG	7 cut(s)	208, 242, 257, 333, 1394, 1502, 1664
Fsp4HI	GCNGC	6 cut(s)	690, 768, 846, 1110, 1407, 1764
FspBI	CTAG	3 cut(s)	548, 938, 1659
GlaI	GCGC	1 cut(s)	397
GluI	GCNGC	6 cut(s)	690, 768, 846, 1110, 1407, 1764
GsaI	CCCAGC	3 cut(s)	1283, 1650, 1851
HaeIII	GGCC	2 cut(s)	366, 455
HhaI	GCGC	1 cut(s)	398
Hin1II	CATG	6 cut(s)	118, 182, 197, 380, 1196, 1322
Hin6I	GCGC	1 cut(s)	396
HinP1I	GCGC	1 cut(s)	396
HindIII	AAGCTT	3 cut(s)	921, 1080, 1499
HinfI	GANTC	8 cut(s)	95, 290, 487, 530, 1157, 1271, 1694, 1714
HphI	GGTGA	5 cut(s)	1405, 1550, 1810, 1831, 1857
Hpy166II	GTNNAC	3 cut(s)	120, 1187, 1573
Hpy188I	TCNGA	7 cut(s)	280, 289, 316, 328, 418, 1087, 1162
Hpy188III	TCNNGA	6 cut(s)	41, 92, 422, 428, 1718, 1736
Hpy8I	GTNNAC	3 cut(s)	120, 1187, 1573
HpyCH4III	ACNGT	3 cut(s)	604, 784, 1200
HpyCH4V	TGCA	8 cut(s)	137, 178, 197, 470, 1334, 1409, 1514, 1688
Hsp92II	CATG	6 cut(s)	118, 182, 197, 380, 1196, 1322
HspAI	GCGC	1 cut(s)	396
Ksp22I	TGATCA	3 cut(s)	154, 373, 418
Kzo9I	GATC	7 cut(s)	154, 253, 373, 418, 424, 1093, 1732
LmnI	GCTCC	1 cut(s)	343
Lsp1109I	GCAGC	6 cut(s)	701, 779, 857, 1121, 1393, 1775
LweI	GCATC	5 cut(s)	146, 355, 443, 1645, 1794
MaeI	CTAG	3 cut(s)	548, 938, 1659
MalI	GATC	7 cut(s)	156, 255, 375, 420, 426, 1095, 1734
MboI	GATC	7 cut(s)	154, 253, 373, 418, 424, 1093, 1732
MfeI	CAATTG	5 cut(s)	162, 495, 720, 876, 948
MflI	RGATCY	2 cut(s)	253, 424
MlsI	TGGCCA	1 cut(s)	455
MluCI	AATT	9 cut(s)	162, 300, 495, 642, 720, 876, 948, 1458, 1532
MluNI	TGGCCA	1 cut(s)	455
MlyI	GAGTC	5 cut(s)	299, 496, 1265, 1703, 1708
MmeI	TCCRAC	2 cut(s)	1345, 1647
Mox20I	TGGCCA	1 cut(s)	455
MroXI	GAANNNNTTC	2 cut(s)	216, 504
MscI	TGGCCA	1 cut(s)	455
MseI	TTAA	1 cut(s)	299
Msp20I	TGGCCA	1 cut(s)	455
MspA1I	CMGCKG	4 cut(s)	692, 770, 848, 1112
MspR9I	CCNGG	1 cut(s)	368
MunI	CAATTG	5 cut(s)	162, 495, 720, 876, 948
Mva1269I	GAATGC	1 cut(s)	1336
MvaI	CCWGG	1 cut(s)	368
MvnI	CGCG	1 cut(s)	398
NdeII	GATC	7 cut(s)	154, 253, 373, 418, 424, 1093, 1732
NlaIII	CATG	6 cut(s)	118, 182, 197, 380, 1196, 1322
NlaIV	GGNNCC	2 cut(s)	426, 1887
NspI	RCATGY	1 cut(s)	197
PaqCI	CACCTGC	1 cut(s)	1337
PctI	GAATGC	1 cut(s)	1336
PdmI	GAANNNNTTC	2 cut(s)	216, 504
PfeI	GAWTC	3 cut(s)	95, 530, 1157
PflFI	GACNNNGTC	1 cut(s)	1274
PkrI	GCNGC	6 cut(s)	691, 769, 847, 1111, 1408, 1765
PleI	GAGTC	5 cut(s)	298, 495, 1265, 1702, 1708
PpsI	GAGTC	5 cut(s)	298, 495, 1265, 1702, 1708
Psp6I	CCWGG	1 cut(s)	366
PspFI	CCCAGC	3 cut(s)	1279, 1646, 1847
PspGI	CCWGG	1 cut(s)	366
PspN4I	GGNNCC	2 cut(s)	426, 1887
PstI	CTGCAG	1 cut(s)	1411
PstNI	CAGNNNCTG	1 cut(s)	1034
PsuI	RGATCY	2 cut(s)	253, 424
PsyI	GACNNNGTC	1 cut(s)	1274
PvuII	CAGCTG	4 cut(s)	692, 770, 848, 1112
RsaI	GTAC	3 cut(s)	1242, 1554, 1574
RsaNI	GTAC	3 cut(s)	1241, 1553, 1573
SaqAI	TTAA	1 cut(s)	299
SatI	GCNGC	6 cut(s)	690, 768, 846, 1110, 1407, 1764
Sau3AI	GATC	7 cut(s)	154, 253, 373, 418, 424, 1093, 1732
SchI	GAGTC	5 cut(s)	299, 496, 1265, 1703, 1708
ScrFI	CCNGG	1 cut(s)	368
SfaNI	GCATC	5 cut(s)	146, 355, 443, 1645, 1794
SfcI	CTRYAG	2 cut(s)	1407, 1629
SmlI	CTYRAG	3 cut(s)	1244, 1296, 1718
SmoI	CTYRAG	3 cut(s)	1244, 1296, 1718
SpeI	ACTAGT	2 cut(s)	547, 937
Sse9I	AATT	9 cut(s)	162, 300, 495, 642, 720, 876, 948, 1458, 1532
SsiI	CCGC	1 cut(s)	752
SspI	AATATT	1 cut(s)	1231
SspMI	CTAG	3 cut(s)	548, 938, 1659
StyD4I	CCNGG	1 cut(s)	366
StyI	CCWWGG	3 cut(s)	225, 1134, 1641
TaaI	ACNGT	3 cut(s)	604, 784, 1200
TaqI	TCGA	2 cut(s)	360, 387
TasI	AATT	9 cut(s)	162, 300, 495, 642, 720, 876, 948, 1458, 1532
TatI	WGTACW	1 cut(s)	1572
TfiI	GAWTC	3 cut(s)	95, 530, 1157
Tru1I	TTAA	1 cut(s)	299
Tru9I	TTAA	1 cut(s)	299
TseI	GCWGC	6 cut(s)	689, 767, 845, 1109, 1406, 1763
TspDTI	ATGAA	7 cut(s)	6, 195, 261, 1188, 1209, 1320, 1608
TspGWI	ACGGA	1 cut(s)	356
Tth111I	GACNNNGTC	1 cut(s)	1274
XceI	RCATGY	1 cut(s)	197
XmiI	GTMKAC	1 cut(s)	119
XmnI	GAANNNNTTC	2 cut(s)	216, 504
XspI	CTAG	3 cut(s)	548, 938, 1659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.