tissue development
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05900 AT3G05900 |
| fragaria_vesca | FvH4_4g21781 |
| malus_domestica | MD13G1136900.v1.1 MD16G1132300.v1.1 |
| prunus_persica | Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 |
| pyrus_communis | pycom13g11930 pycom16g11670 |
| rosa_chinensis | RchiOBHm_Chr4g0428021 |
| rosa_laevigata | RLG00000007189 |
| rosa_multiflora | Rmu_sc0005263.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00369710 |
| rosa_rugosa | Rorug04G0221100 Rorug04G0221200 |
| rosa_samantha | Rh4AG278600 Rh4BG284000 Rh4CG299900 Rh4DG281300 Rh5BG077300 Rh5BG081000 |
| rosa_wichuraiana | Rw4G024220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1049 |
| Acc36I | ACCTGC | 1 cut(s) | 1049 |
| AccI | GTMKAC | 1 cut(s) | 5 |
| AciI | CCGC | 3 cut(s) | 536, 716, 1265 |
| AcuI | CTGAAG | 6 cut(s) | 63, 189, 471, 552, 789, 1191 |
| AfaI | GTAC | 3 cut(s) | 1216, 1377, 1464 |
| Alw26I | GTCTC | 5 cut(s) | 5, 173, 866, 1079, 1409 |
| ApeKI | GCWGC | 2 cut(s) | 713, 1106 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 966 |
| AsuHPI | GGTGA | 6 cut(s) | 113, 1348, 1418, 1510, 1531, 1557 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1359, 1392 |
| BbsI | GAAGAC | 1 cut(s) | 401 |
| BbvCI | CCTCAGC | 1 cut(s) | 243 |
| BbvI | GCAGC | 2 cut(s) | 725, 1093 |
| BccI | CCATC | 5 cut(s) | 121, 346, 943, 1205, 1397 |
| BclI | TGATCA | 3 cut(s) | 259, 289, 1408 |
| BcoDI | GTCTC | 5 cut(s) | 5, 173, 866, 1079, 1409 |
| BfaI | CTAG | 4 cut(s) | 192, 615, 686, 752 |
| BfmI | CTRYAG | 4 cut(s) | 564, 693, 1107, 1236 |
| BfuAI | ACCTGC | 1 cut(s) | 1049 |
| BglII | AGATCT | 1 cut(s) | 194 |
| BisI | GCNGC | 2 cut(s) | 714, 1107 |
| BlsI | GCNGC | 2 cut(s) | 715, 1108 |
| BmsI | GCATC | 4 cut(s) | 115, 610, 889, 1187 |
| BpiI | GAAGAC | 1 cut(s) | 401 |
| BpmI | CTGGAG | 1 cut(s) | 410 |
| Bpu10I | CCTNAGC | 1 cut(s) | 243 |
| BpuEI | CTTGAG | 1 cut(s) | 1409 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1407 |
| Bse1I | ACTGG | 4 cut(s) | 213, 269, 512, 1460 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1407 |
| BseGI | GGATG | 4 cut(s) | 113, 979, 1216, 1424 |
| BseJI | GATNNNNATC | 1 cut(s) | 1407 |
| BseMII | CTCAG | 2 cut(s) | 189, 234 |
| BseNI | ACTGG | 4 cut(s) | 213, 269, 512, 1460 |
| BseRI | GAGGAG | 2 cut(s) | 377, 884 |
| BseXI | GCAGC | 2 cut(s) | 725, 1093 |
| BseYI | CCCAGC | 1 cut(s) | 1547 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1047 |
| BsiEI | CGRYCG | 1 cut(s) | 1047 |
| BslFI | GGGAC | 2 cut(s) | 17, 997 |
| BsmAI | GTCTC | 5 cut(s) | 5, 173, 866, 1079, 1409 |
| BsmFI | GGGAC | 2 cut(s) | 17, 997 |
| Bsp143I | GATC | 6 cut(s) | 194, 259, 289, 1240, 1408, 1582 |
| BspACI | CCGC | 3 cut(s) | 536, 716, 1265 |
| BspCNI | CTCAG | 2 cut(s) | 190, 235 |
| BspHI | TCATGA | 2 cut(s) | 1411, 1585 |
| BspMAI | CTGCAG | 2 cut(s) | 697, 1111 |
| BspMI | ACCTGC | 1 cut(s) | 1049 |
| BsrI | ACTGG | 4 cut(s) | 213, 269, 512, 1460 |
| BssMI | GATC | 6 cut(s) | 194, 259, 289, 1240, 1408, 1582 |
| Bst4CI | ACNGT | 1 cut(s) | 1045 |
| Bst6I | CTCTTC | 3 cut(s) | 1116, 1271, 1344 |
| BstDEI | CTNAG | 3 cut(s) | 9, 198, 243 |
| BstF5I | GGATG | 4 cut(s) | 113, 979, 1216, 1424 |
| BstKTI | GATC | 6 cut(s) | 197, 262, 292, 1243, 1411, 1585 |
| BstMAI | GTCTC | 5 cut(s) | 5, 173, 866, 1079, 1409 |
| BstMBI | GATC | 6 cut(s) | 194, 259, 289, 1240, 1408, 1582 |
| BstMCI | CGRYCG | 1 cut(s) | 1047 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 437, 584, 620, 659, 734, 770, 809 |
| BstNSI | RCATGY | 2 cut(s) | 89, 777 |
| BstSFI | CTRYAG | 4 cut(s) | 564, 693, 1107, 1236 |
| BstV1I | GCAGC | 2 cut(s) | 725, 1093 |
| BstV2I | GAAGAC | 1 cut(s) | 401 |
| BstX2I | RGATCY | 1 cut(s) | 194 |
| BstYI | RGATCY | 1 cut(s) | 194 |
| BtsCI | GGATG | 4 cut(s) | 113, 979, 1216, 1424 |
| BtsI | GCAGTG | 1 cut(s) | 795 |
| BtsIMutI | CAGTG | 4 cut(s) | 206, 302, 519, 795 |
| BveI | ACCTGC | 1 cut(s) | 1049 |
| CciI | TCATGA | 2 cut(s) | 1411, 1585 |
| CseI | GACGC | 1 cut(s) | 743 |
| Csp6I | GTAC | 3 cut(s) | 1215, 1376, 1463 |
| CviAII | CATG | 7 cut(s) | 59, 86, 263, 774, 1395, 1412, 1586 |
| CviQI | GTAC | 3 cut(s) | 1215, 1376, 1463 |
| DdeI | CTNAG | 3 cut(s) | 9, 198, 243 |
| DpnI | GATC | 6 cut(s) | 196, 261, 291, 1242, 1410, 1584 |
| DpnII | GATC | 6 cut(s) | 194, 259, 289, 1240, 1408, 1582 |
| Eam1104I | CTCTTC | 3 cut(s) | 1116, 1271, 1344 |
| EarI | CTCTTC | 3 cut(s) | 1116, 1271, 1344 |
| Eco57I | CTGAAG | 6 cut(s) | 63, 189, 471, 552, 789, 1191 |
| FaeI | CATG | 7 cut(s) | 62, 89, 266, 777, 1398, 1415, 1589 |
| FaqI | GGGAC | 2 cut(s) | 17, 997 |
| FatI | CATG | 7 cut(s) | 58, 85, 262, 773, 1394, 1411, 1585 |
| FauI | CCCGC | 1 cut(s) | 1258 |
| FbaI | TGATCA | 3 cut(s) | 259, 289, 1408 |
| FblI | GTMKAC | 1 cut(s) | 5 |
| Fnu4HI | GCNGC | 2 cut(s) | 714, 1107 |
| FokI | GGATG | 4 cut(s) | 100, 986, 1223, 1411 |
| Fsp4HI | GCNGC | 2 cut(s) | 714, 1107 |
| FspBI | CTAG | 4 cut(s) | 192, 615, 686, 752 |
| GluI | GCNGC | 2 cut(s) | 714, 1107 |
| GsaI | CCCAGC | 1 cut(s) | 1551 |
| GsuI | CTGGAG | 1 cut(s) | 410 |
| HgaI | GACGC | 1 cut(s) | 743 |
| Hin1II | CATG | 7 cut(s) | 62, 89, 266, 777, 1398, 1415, 1589 |
| HincII | GTYRAC | 3 cut(s) | 302, 541, 1020 |
| HindII | GTYRAC | 3 cut(s) | 302, 541, 1020 |
| HindIII | AAGCTT | 2 cut(s) | 918, 953 |
| HinfI | GANTC | 6 cut(s) | 674, 824, 926, 1361, 1391, 1417 |
| HpaI | GTTAAC | 1 cut(s) | 1020 |
| HphI | GGTGA | 6 cut(s) | 113, 1348, 1418, 1510, 1531, 1557 |
| Hpy166II | GTNNAC | 4 cut(s) | 6, 302, 541, 1020 |
| Hpy188I | TCNGA | 6 cut(s) | 169, 178, 199, 630, 679, 829 |
| Hpy188III | TCNNGA | 5 cut(s) | 971, 1048, 1388, 1412, 1586 |
| Hpy8I | GTNNAC | 4 cut(s) | 6, 302, 541, 1020 |
| HpyAV | CCTTC | 7 cut(s) | 164, 247, 376, 430, 973, 1108, 1510 |
| HpyCH4III | ACNGT | 1 cut(s) | 1045 |
| HpyCH4V | TGCA | 6 cut(s) | 55, 89, 695, 1093, 1109, 1398 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 437, 584, 620, 659, 734, 770, 809 |
| HpyF3I | CTNAG | 3 cut(s) | 9, 198, 243 |
| Hsp92II | CATG | 7 cut(s) | 62, 89, 266, 777, 1398, 1415, 1589 |
| Ksp22I | TGATCA | 3 cut(s) | 259, 289, 1408 |
| KspAI | GTTAAC | 1 cut(s) | 1020 |
| Kzo9I | GATC | 6 cut(s) | 194, 259, 289, 1240, 1408, 1582 |
| LmnI | GCTCC | 2 cut(s) | 385, 1270 |
| Lsp1109I | GCAGC | 2 cut(s) | 725, 1093 |
| LweI | GCATC | 4 cut(s) | 115, 610, 889, 1187 |
| MaeI | CTAG | 4 cut(s) | 192, 615, 686, 752 |
| MaeIII | GTNAC | 2 cut(s) | 731, 1478 |
| MalI | GATC | 6 cut(s) | 196, 261, 291, 1242, 1410, 1584 |
| MboI | GATC | 6 cut(s) | 194, 259, 289, 1240, 1408, 1582 |
| MfeI | CAATTG | 5 cut(s) | 306, 414, 579, 654, 804 |
| MflI | RGATCY | 1 cut(s) | 194 |
| MlyI | GAGTC | 4 cut(s) | 935, 1370, 1400, 1411 |
| MroXI | GAANNNNTTC | 1 cut(s) | 966 |
| MseI | TTAA | 3 cut(s) | 1019, 1077, 1332 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1334, 1590 |
| MspA1I | CMGCKG | 1 cut(s) | 716 |
| MunI | CAATTG | 5 cut(s) | 306, 414, 579, 654, 804 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 437, 584, 620, 659, 734, 770, 809 |
| NdeII | GATC | 6 cut(s) | 194, 259, 289, 1240, 1408, 1582 |
| NlaIII | CATG | 7 cut(s) | 62, 89, 266, 777, 1398, 1415, 1589 |
| NmuCI | GTSAC | 1 cut(s) | 731 |
| NspI | RCATGY | 2 cut(s) | 89, 777 |
| PagI | TCATGA | 2 cut(s) | 1411, 1585 |
| PaqCI | CACCTGC | 1 cut(s) | 1049 |
| PdmI | GAANNNNTTC | 1 cut(s) | 966 |
| PfeI | GAWTC | 2 cut(s) | 674, 824 |
| PkrI | GCNGC | 2 cut(s) | 715, 1108 |
| PleI | GAGTC | 4 cut(s) | 934, 1369, 1399, 1411 |
| PpsI | GAGTC | 4 cut(s) | 934, 1369, 1399, 1411 |
| PspFI | CCCAGC | 1 cut(s) | 1547 |
| PstI | CTGCAG | 2 cut(s) | 697, 1111 |
| PsuI | RGATCY | 1 cut(s) | 194 |
| RsaI | GTAC | 3 cut(s) | 1216, 1377, 1464 |
| RsaNI | GTAC | 3 cut(s) | 1215, 1376, 1463 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1334, 1590 |
| SaqAI | TTAA | 3 cut(s) | 1019, 1077, 1332 |
| SatI | GCNGC | 2 cut(s) | 714, 1107 |
| Sau3AI | GATC | 6 cut(s) | 194, 259, 289, 1240, 1408, 1582 |
| SchI | GAGTC | 4 cut(s) | 935, 1370, 1400, 1411 |
| SfaNI | GCATC | 4 cut(s) | 115, 610, 889, 1187 |
| SfcI | CTRYAG | 4 cut(s) | 564, 693, 1107, 1236 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1334, 1590 |
| SmlI | CTYRAG | 1 cut(s) | 1388 |
| SmoI | CTYRAG | 1 cut(s) | 1388 |
| SsiI | CCGC | 3 cut(s) | 536, 716, 1265 |
| SspI | AATATT | 1 cut(s) | 948 |
| SspMI | CTAG | 4 cut(s) | 192, 615, 686, 752 |
| TaaI | ACNGT | 1 cut(s) | 1045 |
| TaqI | TCGA | 3 cut(s) | 225, 1047, 1206 |
| TatI | WGTACW | 1 cut(s) | 1462 |
| TfiI | GAWTC | 2 cut(s) | 674, 824 |
| Tru1I | TTAA | 3 cut(s) | 1019, 1077, 1332 |
| Tru9I | TTAA | 3 cut(s) | 1019, 1077, 1332 |
| TscAI | CASTG | 4 cut(s) | 213, 302, 519, 795 |
| TseFI | GTSAC | 1 cut(s) | 731 |
| TseI | GCWGC | 2 cut(s) | 713, 1106 |
| Tsp45I | GTSAC | 1 cut(s) | 731 |
| TspDTI | ATGAA | 5 cut(s) | 438, 483, 762, 1236, 1602 |
| TspRI | CASTG | 4 cut(s) | 213, 302, 519, 795 |
| XceI | RCATGY | 2 cut(s) | 89, 777 |
| XmiI | GTMKAC | 1 cut(s) | 5 |
| XmnI | GAANNNNTTC | 1 cut(s) | 966 |
| XspI | CTAG | 4 cut(s) | 192, 615, 686, 752 |