MD16G1132300.v1.1

Belongs to the arginase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
10087312 .. 10090246
2935 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1132300.v1.1.491

Sequence Viewer

Length: 1689 bp
ATGTCTACTGAGGCTGCTGTAGTACCTGTGCCTGCTGATGATCAGCCTATTGTGGAAAAAGTTCATGAACAAACACATGAGGTTAAGGAGAGTGATAATTCTTCTCCACCCAAACCTGATGAGAAAAAGGATGCAAAGGAAGATCTTGCAGCAGAGAACTCTGTTGGTTCAGAGGTCTCTACAACCAAGGTTGAAGAAACACCAGTGGATAACGAGAACCAGACCGAGACTCCTGTCGTTGTTGAGGCTGAGAAGGTTGATGATGTTCCAGCCGAAGTAGTCTCGGAAGAGATTGAAAGTTCTGATAAGGAGCCAGAGCAATCATCCACAAAAGAATCAGCTAGTGAAACAGTTGAAGCAGTTGAAAATGTACCAGTGGGGAAACCGGCAGCAGAGTCAGTTGAAGAAAATCCGGTTGAGAAAATAGAAAGCGAAGCAGTTGAGAAAGAAGCAGAGAAGGCAGAAGCTGTTGAAGCAAATGAGAAGTCAGCTAGTGAAAAAGCAGAAGCAGTTGAGAAAGAAGTGGATGAGAAGTCGTCTAGAGAAGAAGCTGAAGAAGTGGATGAGAAAAAGCCAGTGGAGAATGTAGCATTTGAGGAAGTTGAGAAAGAAGCAGAGAAGGATGAAACTATTGAAGCAGTTGAGAAAGAAGACAAAAAGACGGAAGCAATTGAAGAAGCAGATGAGCAAAAGCCAGTGGAGAATGTAGCAACTGAAGAAGTTGAGAAAGAAGCAGATGAGCAAAAGCCAGTGGAGATTGTAGCAACTGACGAAGTTGAGAAAGAAGCAGAGAAGGATCAAACTATCGAGGTAGTTGGGAAAGAACCCGAAAAGACAGAAGCAATTGAAGCAGCTGATGAGAAGAAACCAGACATCGAAGCAGTTGAGAAACAGATAGCTGATGAGAAGCCAAGGGTTGAAGCTTCTGAGGCTAATACATCGACTGAAGAAGCAGCTGGTCAGTCGGTGGAGGCGCCTTGTGAAACGCCTCTTGTTAAAGATTCAGACACTGTAAGTGTAGTGGAGGGCAAGCAACATGAACAGCTAAAAGATTTATTAGAGATGGAGAGAAATGTTGAGAAGGAACTCAAGACTGAAGAAAATGCTGCCACCGCTAGCTCTGCCTCAACCATTGAGGAAGCACAAAAGAATGAGAAAGAAGCTGAGAAAGATACTGCAGTTCCTGATGTACATAAGCCAGTTGCTGAGAACACCGAAAAAGAAGCAGGCGAAAATGCTGCAGAGAAGGATGAGGAGAAGAAGATTGTGAAAACAGAACAAGAAACTGAAGAGAATGTTGAGAAGACTGATGAAAATGCTGCACAAGTTGCCGATAGAGATTTAGTCGAGGCGAAAGAGGTAGCATCGGAGAAAGAAGAGGAGTACAAGGATATTAAAGAGAATGAAGTTGTTTTTGCTCCTTCTTCTGCCATTGTTGAACCCGAAAGTAAGTTGGAGAAAACCGAAGAAGCGAAAACTGAGACGGCTGCCGAGAGACTTGAGGCCTCCAAAGAGGAGGCGAAGCAAGATGTTTCAGTAAAAGCACAAAAGCAGTCAGGTGGGATCCTTTCGAAGGTGAAGCAGTCCATTGTGAAGGTGAAGAAAGCGATTATTGGGAAATCTCCAAGCTCAAAAGTGCTTTCCCCGGCACCAGAAGTCAAAGCAGATGAACAAGTCGGTGTCAAGTAG

Protein Analysis

563

Amino Acids

61.41

Weight (kDa)

4.34

Isoelectric Point (pI)

52.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 973, 1648
AccI GTMKAC 1 cut(s) 5
AciI CCGC 1 cut(s) 1113
AclWI GGATC 3 cut(s) 804, 1558, 1571
AcuI CTGAAG 5 cut(s) 573, 735, 966, 1116, 1308
AcyI GRCGYC 1 cut(s) 974
AfaI GTAC 4 cut(s) 24, 372, 1191, 1385
AfiI CCNNNNNNNGG 1 cut(s) 1573
Alw26I GTCTC 5 cut(s) 181, 221, 286, 1475, 1489
AlwI GGATC 3 cut(s) 804, 1558, 1571
AlwNI CAGNNNCTG 4 cut(s) 467, 1010, 1184, 1205
AoxI GGCC 1 cut(s) 1503
ApeKI GCWGC 9 cut(s) 14, 149, 389, 851, 953, 1106, 1238, 1319, 1487
ArsI GACNNNNNNTTYG 2 cut(s) 470, 502
Asp700I GAANNNNTTC 1 cut(s) 60
AspLEI GCGC 1 cut(s) 976
AsuC2I CCSGG 1 cut(s) 1646
AsuHPI GGTGA 2 cut(s) 1588, 1609
AsuII TTCGAA 1 cut(s) 1571
AsuNHI GCTAGC 1 cut(s) 1115
BaeI ACNNNNGTAYC 2 cut(s) 1164, 1197
BamHI GGATCC 1 cut(s) 1563
BanI GGYRCC 2 cut(s) 973, 1648
BbsI GAAGAC 2 cut(s) 657, 1310
BbvI GCAGC 8 cut(s) 161, 401, 863, 965, 1093, 1225, 1306, 1474
BccI CCATC 1 cut(s) 1057
BceAI ACGGC 1 cut(s) 1500
BcgI CGANNNNNNTGC 2 cut(s) 1220, 1254
BclI TGATCA 1 cut(s) 40
BcnI CCSGG 1 cut(s) 1646
BcoDI GTCTC 5 cut(s) 181, 221, 286, 1475, 1489
BfaI CTAG 4 cut(s) 342, 492, 540, 1116
BfmI CTRYAG 3 cut(s) 18, 1176, 1239
BfoI RGCGCY 1 cut(s) 977
BglII AGATCT 1 cut(s) 142
BisI GCNGC 9 cut(s) 15, 150, 390, 852, 954, 1107, 1239, 1320, 1488
BlsI GCNGC 9 cut(s) 16, 151, 391, 853, 955, 1108, 1240, 1321, 1489
Bme1390I CCNGG 1 cut(s) 1646
BmiI GGNNCC 4 cut(s) 312, 975, 1565, 1650
BmrFI CCNGG 1 cut(s) 1646
BmsI GCATC 2 cut(s) 121, 1373
BmtI GCTAGC 1 cut(s) 1119
BoxI GACNNNNGTC 1 cut(s) 233
BpiI GAAGAC 2 cut(s) 657, 1310
Bpu14I TTCGAA 1 cut(s) 1571
BpuEI CTTGAG 2 cut(s) 1073, 1520
BpuMI CCSGG 1 cut(s) 1646
BsaHI GRCGYC 1 cut(s) 974
BsaI GGTCTC 1 cut(s) 181
BsaJI CCNNGG 3 cut(s) 186, 911, 1644
BsaWI WCCGGW 1 cut(s) 412
BsaXI ACNNNNNCTCC 2 cut(s) 214, 244
Bsc4I CCNNNNNNNGG 1 cut(s) 1573
Bse118I RCCGGY 1 cut(s) 385
Bse1I ACTGG 6 cut(s) 203, 374, 575, 695, 749, 1199
BseDI CCNNGG 3 cut(s) 186, 911, 1644
BseGI GGATG 6 cut(s) 136, 323, 532, 568, 628, 1255
BseLI CCNNNNNNNGG 1 cut(s) 1573
BseMII CTCAG 5 cut(s) 240, 918, 1155, 1197, 1470
BseNI ACTGG 6 cut(s) 203, 374, 575, 695, 749, 1199
BseRI GAGGAG 3 cut(s) 1268, 1394, 1529
BseXI GCAGC 8 cut(s) 161, 401, 863, 965, 1093, 1225, 1306, 1474
BsgI GTGCAG 1 cut(s) 1305
BshFI GGCC 1 cut(s) 1505
BshNI GGYRCC 2 cut(s) 973, 1648
BsiSI CCGG 3 cut(s) 386, 413, 1646
BslI CCNNNNNNNGG 1 cut(s) 1573
BsmAI GTCTC 5 cut(s) 181, 221, 286, 1475, 1489
BsmBI CGTCTC 1 cut(s) 1475
BsnI GGCC 1 cut(s) 1505
Bso31I GGTCTC 1 cut(s) 181
Bsp119I TTCGAA 1 cut(s) 1571
Bsp1407I TGTACA 1 cut(s) 1189
Bsp143I GATC 4 cut(s) 40, 142, 796, 1563
BspACI CCGC 1 cut(s) 1113
BspANI GGCC 1 cut(s) 1505
BspCNI CTCAG 5 cut(s) 241, 919, 1156, 1198, 1471
BspHI TCATGA 1 cut(s) 64
BspLI GGNNCC 4 cut(s) 312, 975, 1565, 1650
BspMAI CTGCAG 2 cut(s) 1180, 1243
BspOI GCTAGC 1 cut(s) 1119
BspPI GGATC 3 cut(s) 804, 1558, 1571
BspT104I TTCGAA 1 cut(s) 1571
BspT107I GGYRCC 2 cut(s) 973, 1648
BspTNI GGTCTC 1 cut(s) 181
BsrFI RCCGGY 1 cut(s) 385
BsrGI TGTACA 1 cut(s) 1189
BsrI ACTGG 6 cut(s) 203, 374, 575, 695, 749, 1199
BssAI RCCGGY 1 cut(s) 385
BssECI CCNNGG 3 cut(s) 186, 911, 1644
BssMI GATC 4 cut(s) 40, 142, 796, 1563
BssNI GRCGYC 1 cut(s) 974
BssT1I CCWWGG 2 cut(s) 186, 911
Bst4CI ACNGT 2 cut(s) 352, 1012
Bst6I CTCTTC 3 cut(s) 282, 1284, 1371
BstACI GRCGYC 1 cut(s) 974
BstAPI GCANNNNNTGC 1 cut(s) 1328
BstAUI TGTACA 1 cut(s) 1189
BstBI TTCGAA 1 cut(s) 1571
BstC8I GCNNGC 4 cut(s) 33, 1031, 1117, 1228
BstDEI CTNAG 6 cut(s) 9, 249, 927, 1164, 1206, 1479
BstENI CCTNNNNNAGG 1 cut(s) 1571
BstF5I GGATG 6 cut(s) 136, 323, 532, 568, 628, 1255
BstH2I RGCGCY 1 cut(s) 977
BstHHI GCGC 1 cut(s) 976
BstKTI GATC 4 cut(s) 43, 145, 799, 1566
BstMAI GTCTC 5 cut(s) 181, 221, 286, 1475, 1489
BstMBI GATC 4 cut(s) 40, 142, 796, 1563
BstMWI GCNNNNNNNGC 7 cut(s) 458, 473, 848, 929, 1112, 1121, 1328
BstPAI GACNNNNGTC 1 cut(s) 233
BstSCI CCNGG 1 cut(s) 1644
BstSFI CTRYAG 3 cut(s) 18, 1176, 1239
BstV1I GCAGC 8 cut(s) 161, 401, 863, 965, 1093, 1225, 1306, 1474
BstV2I GAAGAC 2 cut(s) 657, 1310
BstX2I RGATCY 2 cut(s) 142, 1563
BstYI RGATCY 2 cut(s) 142, 1563
BsuRI GGCC 1 cut(s) 1505
BtsCI GGATG 6 cut(s) 136, 323, 532, 568, 628, 1255
BtsIMutI CAGTG 6 cut(s) 210, 381, 582, 702, 756, 1008
Cac8I GCNNGC 4 cut(s) 33, 1031, 1117, 1228
CaiI CAGNNNCTG 4 cut(s) 467, 1010, 1184, 1205
CciI TCATGA 1 cut(s) 64
CfoI GCGC 1 cut(s) 976
Cfr10I RCCGGY 1 cut(s) 385
Csp6I GTAC 4 cut(s) 23, 371, 1190, 1384
CviAII CATG 3 cut(s) 65, 77, 1037
CviQI GTAC 4 cut(s) 23, 371, 1190, 1384
DdeI CTNAG 6 cut(s) 9, 249, 927, 1164, 1206, 1479
DinI GGCGCC 1 cut(s) 975
DpnI GATC 4 cut(s) 42, 144, 798, 1565
DpnII GATC 4 cut(s) 40, 142, 796, 1563
Eam1104I CTCTTC 3 cut(s) 282, 1284, 1371
EarI CTCTTC 3 cut(s) 282, 1284, 1371
Eco130I CCWWGG 2 cut(s) 186, 911
Eco147I AGGCCT 1 cut(s) 1505
Eco31I GGTCTC 1 cut(s) 181
Eco57I CTGAAG 5 cut(s) 573, 735, 966, 1116, 1308
EcoNI CCTNNNNNAGG 1 cut(s) 1571
EcoT14I CCWWGG 2 cut(s) 186, 911
EgeI GGCGCC 1 cut(s) 975
EheI GGCGCC 1 cut(s) 975
ErhI CCWWGG 2 cut(s) 186, 911
Esp3I CGTCTC 1 cut(s) 1475
FaeI CATG 3 cut(s) 68, 80, 1040
FaiI YATR 4 cut(s) 66, 78, 1038, 1194
FatI CATG 3 cut(s) 64, 76, 1036
FbaI TGATCA 1 cut(s) 40
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 9 cut(s) 15, 150, 390, 852, 954, 1107, 1239, 1320, 1488
FokI GGATG 6 cut(s) 143, 310, 539, 575, 635, 1262
Fsp4HI GCNGC 9 cut(s) 15, 150, 390, 852, 954, 1107, 1239, 1320, 1488
FspBI CTAG 4 cut(s) 342, 492, 540, 1116
GlaI GCGC 1 cut(s) 975
GluI GCNGC 9 cut(s) 15, 150, 390, 852, 954, 1107, 1239, 1320, 1488
HaeII RGCGCY 1 cut(s) 977
HaeIII GGCC 1 cut(s) 1505
HapII CCGG 3 cut(s) 386, 413, 1646
HhaI GCGC 1 cut(s) 976
Hin1I GRCGYC 1 cut(s) 974
Hin1II CATG 3 cut(s) 68, 80, 1040
Hin6I GCGC 1 cut(s) 974
HinP1I GCGC 1 cut(s) 974
HindIII AAGCTT 1 cut(s) 921
HinfI GANTC 4 cut(s) 229, 335, 395, 1001
HpaII CCGG 3 cut(s) 386, 413, 1646
HphI GGTGA 2 cut(s) 1588, 1609
Hpy166II GTNNAC 1 cut(s) 6
Hpy188I TCNGA 6 cut(s) 172, 286, 304, 928, 1006, 1369
Hpy188III TCNNGA 4 cut(s) 65, 540, 1090, 1184
Hpy8I GTNNAC 1 cut(s) 6
HpyAV CCTTC 9 cut(s) 247, 451, 613, 787, 1075, 1240, 1431, 1567, 1588
HpyCH4III ACNGT 2 cut(s) 352, 1012
HpyCH4V TGCA 5 cut(s) 134, 149, 1178, 1241, 1322
HpyF10VI GCNNNNNNNGC 7 cut(s) 458, 473, 848, 929, 1112, 1121, 1328
HpyF3I CTNAG 6 cut(s) 9, 249, 927, 1164, 1206, 1479
Hsp92I GRCGYC 1 cut(s) 974
Hsp92II CATG 3 cut(s) 68, 80, 1040
HspAI GCGC 1 cut(s) 974
KasI GGCGCC 1 cut(s) 973
Ksp22I TGATCA 1 cut(s) 40
Kzo9I GATC 4 cut(s) 40, 142, 796, 1563
LmnI GCTCC 2 cut(s) 310, 1423
Lsp1109I GCAGC 8 cut(s) 161, 401, 863, 965, 1093, 1225, 1306, 1474
LweI GCATC 2 cut(s) 121, 1373
MaeI CTAG 4 cut(s) 342, 492, 540, 1116
MalI GATC 4 cut(s) 42, 144, 798, 1565
MboI GATC 4 cut(s) 40, 142, 796, 1563
MfeI CAATTG 2 cut(s) 669, 843
MflI RGATCY 2 cut(s) 142, 1563
MluCI AATT 3 cut(s) 97, 669, 843
Mly113I GGCGCC 1 cut(s) 974
MlyI GAGTC 2 cut(s) 223, 404
MmeI TCCRAC 1 cut(s) 1434
MroXI GAANNNNTTC 1 cut(s) 60
MseI TTAA 3 cut(s) 84, 996, 1395
MspA1I CMGCKG 2 cut(s) 854, 956
MspI CCGG 3 cut(s) 386, 413, 1646
MspR9I CCNGG 1 cut(s) 1646
MunI CAATTG 2 cut(s) 669, 843
MwoI GCNNNNNNNGC 7 cut(s) 458, 473, 848, 929, 1112, 1121, 1328
NarI GGCGCC 1 cut(s) 974
NciI CCSGG 1 cut(s) 1646
NdeII GATC 4 cut(s) 40, 142, 796, 1563
NheI GCTAGC 1 cut(s) 1115
NlaIII CATG 3 cut(s) 68, 80, 1040
NlaIV GGNNCC 4 cut(s) 312, 975, 1565, 1650
NmeAIII GCCGAG 1 cut(s) 1516
NspV TTCGAA 1 cut(s) 1571
PagI TCATGA 1 cut(s) 64
PceI AGGCCT 1 cut(s) 1505
PdmI GAANNNNTTC 1 cut(s) 60
PfeI GAWTC 2 cut(s) 335, 1001
PkrI GCNGC 9 cut(s) 16, 151, 391, 853, 955, 1108, 1240, 1321, 1489
PleI GAGTC 2 cut(s) 223, 403
PluTI GGCGCC 1 cut(s) 977
PpsI GAGTC 2 cut(s) 223, 403
PshAI GACNNNNGTC 1 cut(s) 233
PspN4I GGNNCC 4 cut(s) 312, 975, 1565, 1650
PstI CTGCAG 2 cut(s) 1180, 1243
PstNI CAGNNNCTG 4 cut(s) 467, 1010, 1184, 1205
PsuI RGATCY 2 cut(s) 142, 1563
PvuII CAGCTG 2 cut(s) 854, 956
RsaI GTAC 4 cut(s) 24, 372, 1191, 1385
RsaNI GTAC 4 cut(s) 23, 371, 1190, 1384
SaqAI TTAA 3 cut(s) 84, 996, 1395
SatI GCNGC 9 cut(s) 15, 150, 390, 852, 954, 1107, 1239, 1320, 1488
Sau3AI GATC 4 cut(s) 40, 142, 796, 1563
SchI GAGTC 2 cut(s) 223, 404
ScrFI CCNGG 1 cut(s) 1646
SfaNI GCATC 2 cut(s) 121, 1373
SfcI CTRYAG 3 cut(s) 18, 1176, 1239
SfoI GGCGCC 1 cut(s) 975
SfuI TTCGAA 1 cut(s) 1571
SmlI CTYRAG 2 cut(s) 1088, 1499
SmoI CTYRAG 2 cut(s) 1088, 1499
Sse9I AATT 3 cut(s) 97, 669, 843
SseBI AGGCCT 1 cut(s) 1505
SsiI CCGC 1 cut(s) 1113
SspDI GGCGCC 1 cut(s) 973
SspMI CTAG 4 cut(s) 342, 492, 540, 1116
StuI AGGCCT 1 cut(s) 1505
StyD4I CCNGG 1 cut(s) 1644
StyI CCWWGG 2 cut(s) 186, 911
TaaI ACNGT 2 cut(s) 352, 1012
TaqI TCGA 5 cut(s) 807, 876, 941, 1347, 1571
TaqII GACCGA 1 cut(s) 239
TasI AATT 3 cut(s) 97, 669, 843
TatI WGTACW 2 cut(s) 1189, 1383
TfiI GAWTC 2 cut(s) 335, 1001
Tru1I TTAA 3 cut(s) 84, 996, 1395
Tru9I TTAA 3 cut(s) 84, 996, 1395
TscAI CASTG 6 cut(s) 210, 381, 582, 702, 756, 1015
TseI GCWGC 9 cut(s) 14, 149, 389, 851, 953, 1106, 1238, 1319, 1487
TspDTI ATGAA 7 cut(s) 53, 81, 639, 1053, 1326, 1419, 1683
TspGWI ACGGA 1 cut(s) 677
TspRI CASTG 6 cut(s) 210, 381, 582, 702, 756, 1015
XagI CCTNNNNNAGG 1 cut(s) 1571
XbaI TCTAGA 1 cut(s) 539
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 60
XspI CTAG 4 cut(s) 342, 492, 540, 1116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.