tissue development
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05900 AT3G05900 |
| fragaria_vesca | FvH4_4g21781 |
| malus_domestica | MD13G1136900.v1.1 MD16G1132300.v1.1 |
| prunus_persica | Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 Prupe.1G208400_v2.0.a1 |
| pyrus_communis | pycom13g11930 pycom16g11670 |
| rosa_chinensis | RchiOBHm_Chr4g0428021 |
| rosa_laevigata | RLG00000007189 |
| rosa_multiflora | Rmu_sc0005263.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00369710 |
| rosa_rugosa | Rorug04G0221100 Rorug04G0221200 |
| rosa_samantha | Rh4AG278600 Rh4BG284000 Rh4CG299900 Rh4DG281300 Rh5BG077300 Rh5BG081000 |
| rosa_wichuraiana | Rw4G024220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 5 |
| AciI | CCGC | 1 cut(s) | 314 |
| AcuI | CTGAAG | 5 cut(s) | 219, 483, 726, 918, 1131 |
| AfaI | GTAC | 1 cut(s) | 1380 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 280, 313 |
| AjnI | CCWGG | 1 cut(s) | 219 |
| AluBI | AGCT | 9 cut(s) | 599, 626, 701, 710, 977, 1165, 1394, 1469, 1491 |
| AluI | AGCT | 9 cut(s) | 599, 626, 701, 710, 977, 1165, 1394, 1469, 1491 |
| Alw21I | GWGCWC | 1 cut(s) | 216 |
| Alw26I | GTCTC | 5 cut(s) | 5, 173, 803, 917, 1019 |
| AsuC2I | CCSGG | 1 cut(s) | 1147 |
| AsuHPI | GGTGA | 6 cut(s) | 926, 1288, 1358, 1450, 1471, 1497 |
| BbsI | GAAGAC | 1 cut(s) | 776 |
| Bbv12I | GWGCWC | 1 cut(s) | 216 |
| BccI | CCATC | 4 cut(s) | 121, 352, 880, 1337 |
| BciT130I | CCWGG | 1 cut(s) | 221 |
| BciVI | GTATCC | 1 cut(s) | 1144 |
| BclI | TGATCA | 2 cut(s) | 259, 1348 |
| BcnI | CCSGG | 1 cut(s) | 1147 |
| BcoDI | GTCTC | 5 cut(s) | 5, 173, 803, 917, 1019 |
| BfaI | CTAG | 1 cut(s) | 627 |
| BfmI | CTRYAG | 1 cut(s) | 576 |
| BfuI | GTATCC | 1 cut(s) | 1144 |
| Bme1390I | CCNGG | 2 cut(s) | 221, 1147 |
| BmrFI | CCNGG | 2 cut(s) | 221, 1147 |
| BmsI | GCATC | 5 cut(s) | 985, 1036, 1127, 1162, 1303 |
| BpiI | GAAGAC | 1 cut(s) | 776 |
| BpuEI | CTTGAG | 1 cut(s) | 1349 |
| BpuMI | CCSGG | 1 cut(s) | 1147 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1347 |
| BsaJI | CCNNGG | 1 cut(s) | 1146 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 280, 313 |
| Bse1I | ACTGG | 2 cut(s) | 269, 524 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1347 |
| BseBI | CCWGG | 1 cut(s) | 221 |
| BseDI | CCNNGG | 1 cut(s) | 1146 |
| BseGI | GGATG | 1 cut(s) | 113 |
| BseJI | GATNNNNATC | 1 cut(s) | 1347 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 280, 313 |
| BseMII | CTCAG | 1 cut(s) | 240 |
| BseNI | ACTGG | 2 cut(s) | 269, 524 |
| BseRI | GAGGAG | 3 cut(s) | 99, 383, 1037 |
| BseYI | CCCAGC | 1 cut(s) | 1487 |
| BsiHKAI | GWGCWC | 1 cut(s) | 216 |
| BsiSI | CCGG | 2 cut(s) | 329, 1146 |
| BslFI | GGGAC | 1 cut(s) | 17 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 280, 313 |
| BsmAI | GTCTC | 5 cut(s) | 5, 173, 803, 917, 1019 |
| BsmFI | GGGAC | 1 cut(s) | 17 |
| Bsp1286I | GDGCHC | 1 cut(s) | 216 |
| Bsp143I | GATC | 6 cut(s) | 82, 259, 289, 1180, 1348, 1522 |
| BspACI | CCGC | 1 cut(s) | 314 |
| BspCNI | CTCAG | 1 cut(s) | 241 |
| BspHI | TCATGA | 2 cut(s) | 292, 1351 |
| BsrI | ACTGG | 2 cut(s) | 269, 524 |
| BssECI | CCNNGG | 1 cut(s) | 1146 |
| BssMI | GATC | 6 cut(s) | 82, 259, 289, 1180, 1348, 1522 |
| Bst2UI | CCWGG | 1 cut(s) | 221 |
| Bst4CI | ACNGT | 1 cut(s) | 985 |
| Bst6I | CTCTTC | 3 cut(s) | 801, 1056, 1211 |
| BstC8I | GCNNGC | 2 cut(s) | 894, 952 |
| BstDEI | CTNAG | 2 cut(s) | 9, 249 |
| BstF5I | GGATG | 1 cut(s) | 113 |
| BstKTI | GATC | 6 cut(s) | 85, 262, 292, 1183, 1351, 1525 |
| BstMAI | GTCTC | 5 cut(s) | 5, 173, 803, 917, 1019 |
| BstMBI | GATC | 6 cut(s) | 82, 259, 289, 1180, 1348, 1522 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 254, 386, 596, 632, 671, 707, 746, 785, 1400 |
| BstNI | CCWGG | 1 cut(s) | 221 |
| BstNSI | RCATGY | 1 cut(s) | 639 |
| BstSCI | CCNGG | 2 cut(s) | 219, 1145 |
| BstSFI | CTRYAG | 1 cut(s) | 576 |
| BstV2I | GAAGAC | 1 cut(s) | 776 |
| BsuI | GTATCC | 1 cut(s) | 1144 |
| BtsCI | GGATG | 1 cut(s) | 113 |
| BtsI | GCAGTG | 3 cut(s) | 552, 732, 1040 |
| BtsIMutI | CAGTG | 4 cut(s) | 531, 552, 732, 1040 |
| Cac8I | GCNNGC | 2 cut(s) | 894, 952 |
| CciI | TCATGA | 2 cut(s) | 292, 1351 |
| CsiI | ACCWGGT | 1 cut(s) | 219 |
| Csp6I | GTAC | 1 cut(s) | 1379 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 528, 563 |
| CviAII | CATG | 8 cut(s) | 59, 86, 263, 293, 636, 803, 1335, 1352 |
| CviQI | GTAC | 1 cut(s) | 1379 |
| DdeI | CTNAG | 2 cut(s) | 9, 249 |
| DpnI | GATC | 6 cut(s) | 84, 261, 291, 1182, 1350, 1524 |
| DpnII | GATC | 6 cut(s) | 82, 259, 289, 1180, 1348, 1522 |
| Eam1104I | CTCTTC | 3 cut(s) | 801, 1056, 1211 |
| EarI | CTCTTC | 3 cut(s) | 801, 1056, 1211 |
| Eco57I | CTGAAG | 5 cut(s) | 219, 483, 726, 918, 1131 |
| EcoRII | CCWGG | 1 cut(s) | 219 |
| FaeI | CATG | 8 cut(s) | 62, 89, 266, 296, 639, 806, 1338, 1355 |
| FaqI | GGGAC | 1 cut(s) | 17 |
| FatI | CATG | 8 cut(s) | 58, 85, 262, 292, 635, 802, 1334, 1351 |
| FbaI | TGATCA | 2 cut(s) | 259, 1348 |
| FblI | GTMKAC | 1 cut(s) | 5 |
| FokI | GGATG | 1 cut(s) | 100 |
| FspBI | CTAG | 1 cut(s) | 627 |
| GsaI | CCCAGC | 1 cut(s) | 1491 |
| HapII | CCGG | 2 cut(s) | 329, 1146 |
| Hin1II | CATG | 8 cut(s) | 62, 89, 266, 296, 639, 806, 1338, 1355 |
| HincII | GTYRAC | 4 cut(s) | 302, 553, 604, 960 |
| HindII | GTYRAC | 4 cut(s) | 302, 553, 604, 960 |
| HindIII | AAGCTT | 1 cut(s) | 708 |
| HinfI | GANTC | 8 cut(s) | 440, 686, 761, 854, 863, 1301, 1331, 1357 |
| HpaI | GTTAAC | 1 cut(s) | 960 |
| HpaII | CCGG | 2 cut(s) | 329, 1146 |
| HphI | GGTGA | 6 cut(s) | 926, 1288, 1358, 1450, 1471, 1497 |
| Hpy166II | GTNNAC | 6 cut(s) | 6, 302, 482, 553, 604, 960 |
| Hpy188I | TCNGA | 5 cut(s) | 178, 199, 445, 691, 766 |
| Hpy188III | TCNNGA | 4 cut(s) | 293, 1328, 1352, 1526 |
| Hpy8I | GTNNAC | 6 cut(s) | 6, 302, 482, 553, 604, 960 |
| HpyAV | CCTTC | 8 cut(s) | 164, 247, 391, 442, 835, 913, 1048, 1450 |
| HpyCH4III | ACNGT | 1 cut(s) | 985 |
| HpyCH4V | TGCA | 8 cut(s) | 89, 545, 881, 998, 1033, 1049, 1175, 1338 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 254, 386, 596, 632, 671, 707, 746, 785, 1400 |
| HpyF3I | CTNAG | 2 cut(s) | 9, 249 |
| Hsp92II | CATG | 8 cut(s) | 62, 89, 266, 296, 639, 806, 1338, 1355 |
| Ksp22I | TGATCA | 2 cut(s) | 259, 1348 |
| KspAI | GTTAAC | 1 cut(s) | 960 |
| Kzo9I | GATC | 6 cut(s) | 82, 259, 289, 1180, 1348, 1522 |
| LmnI | GCTCC | 2 cut(s) | 403, 1210 |
| LweI | GCATC | 5 cut(s) | 985, 1036, 1127, 1162, 1303 |
| MabI | ACCWGGT | 1 cut(s) | 219 |
| MaeI | CTAG | 1 cut(s) | 627 |
| MaeIII | GTNAC | 1 cut(s) | 1418 |
| MalI | GATC | 6 cut(s) | 84, 261, 291, 1182, 1350, 1524 |
| MboI | GATC | 6 cut(s) | 82, 259, 289, 1180, 1348, 1522 |
| MfeI | CAATTG | 6 cut(s) | 381, 426, 540, 591, 666, 741 |
| MhlI | GDGCHC | 1 cut(s) | 216 |
| MluCI | AATT | 9 cut(s) | 148, 163, 381, 426, 540, 591, 666, 741, 1473 |
| MlyI | GAGTC | 2 cut(s) | 872, 1340 |
| MseI | TTAA | 3 cut(s) | 959, 1167, 1272 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1274 |
| MspI | CCGG | 2 cut(s) | 329, 1146 |
| MspR9I | CCNGG | 2 cut(s) | 221, 1147 |
| MunI | CAATTG | 6 cut(s) | 381, 426, 540, 591, 666, 741 |
| MvaI | CCWGG | 1 cut(s) | 221 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 254, 386, 596, 632, 671, 707, 746, 785, 1400 |
| NciI | CCSGG | 1 cut(s) | 1147 |
| NdeII | GATC | 6 cut(s) | 82, 259, 289, 1180, 1348, 1522 |
| NlaIII | CATG | 8 cut(s) | 62, 89, 266, 296, 639, 806, 1338, 1355 |
| NspI | RCATGY | 1 cut(s) | 639 |
| PagI | TCATGA | 2 cut(s) | 292, 1351 |
| PfeI | GAWTC | 6 cut(s) | 440, 686, 761, 854, 1301, 1357 |
| PleI | GAGTC | 2 cut(s) | 871, 1339 |
| PpsI | GAGTC | 2 cut(s) | 871, 1339 |
| Psp6I | CCWGG | 1 cut(s) | 219 |
| PspFI | CCCAGC | 1 cut(s) | 1487 |
| PspGI | CCWGG | 1 cut(s) | 219 |
| RsaI | GTAC | 1 cut(s) | 1380 |
| RsaNI | GTAC | 1 cut(s) | 1379 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1274 |
| SaqAI | TTAA | 3 cut(s) | 959, 1167, 1272 |
| Sau3AI | GATC | 6 cut(s) | 82, 259, 289, 1180, 1348, 1522 |
| SchI | GAGTC | 2 cut(s) | 872, 1340 |
| ScrFI | CCNGG | 2 cut(s) | 221, 1147 |
| SduI | GDGCHC | 1 cut(s) | 216 |
| SexAI | ACCWGGT | 1 cut(s) | 219 |
| SfaNI | GCATC | 5 cut(s) | 985, 1036, 1127, 1162, 1303 |
| SfcI | CTRYAG | 1 cut(s) | 576 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1274 |
| SmlI | CTYRAG | 1 cut(s) | 1328 |
| SmoI | CTYRAG | 1 cut(s) | 1328 |
| Sse9I | AATT | 9 cut(s) | 148, 163, 381, 426, 540, 591, 666, 741, 1473 |
| SsiI | CCGC | 1 cut(s) | 314 |
| SspMI | CTAG | 1 cut(s) | 627 |
| StyD4I | CCNGG | 2 cut(s) | 219, 1145 |
| TaaI | ACNGT | 1 cut(s) | 985 |
| TaqI | TCGA | 2 cut(s) | 225, 1367 |
| TasI | AATT | 9 cut(s) | 148, 163, 381, 426, 540, 591, 666, 741, 1473 |
| TatI | WGTACW | 1 cut(s) | 1378 |
| TfiI | GAWTC | 6 cut(s) | 440, 686, 761, 854, 1301, 1357 |
| Tru1I | TTAA | 3 cut(s) | 959, 1167, 1272 |
| Tru9I | TTAA | 3 cut(s) | 959, 1167, 1272 |
| TscAI | CASTG | 4 cut(s) | 531, 552, 732, 1040 |
| TspDTI | ATGAA | 4 cut(s) | 450, 807, 819, 1116 |
| TspRI | CASTG | 4 cut(s) | 531, 552, 732, 1040 |
| XceI | RCATGY | 1 cut(s) | 639 |
| XmiI | GTMKAC | 1 cut(s) | 5 |
| XspI | CTAG | 1 cut(s) | 627 |