AT3G08960

Importin-beta N-terminal domain

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
2729743 .. 2737356
7614 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G08960.3

Sequence Viewer

Length: 3033 bp
ATGGCGTTATCGGCTTCCGATTTGCCGGCGATGTACACGCTATTAGCTAATTCAATGAGCGGTGACGAGACCGTTCGGCGGCCGGCGGAGGCGGCTCTATCTCTGTCGGAGAGTAGACCTGGTTTCTGTTCTTGCCTTATGGAAGTAATTGCATCCAAGGATTTGGTGTCCCATGTGGACGTTAGATTAATGGCCTCAGTGTATTTCAAGAACAGTATCAACCGTCATTGGAAGAGCAGAAGAAATTCATGGAGTATGAGCAACGAGGAAAAGAGTCATCTGAGGCAGAAATTGTTGTCTCACTTGAGAGAAGAGAACTACCAGATAGCGGAAATGTTGGCTGTTCTCATATCGAAGATAGCCCGTTTTGATTATCCTAGGGAATGGCCTGATCTCTTTTCGGTACTAGCGCAACAGCTTCACTCAGCTGACGTTCTGGCTTCTCACAGAATCTTTCTGATTCTTTTTCGAACCTTAAAGGAATTGTCTACTAAACGTCTCACTGCGGATCAGAAGACCTTCGCTGAGATCTCGTCGCAATTCTTCGACTTTAGTTGGCACCTTTGGCAAACTGATGTCCAAACAATTCTACATGGCTTTTCAACAATGGTTCAGAGCTATGGTTCAAATAGTGCCGAGCAGCATCACGATGAGCTTTTTCTGACTTGTGAGAGGTGGTTTTTATGTTTGAAAATAGTGCGCCAACTGATAATTTCAGGATTTCTAAGCGATGCCAATAATATACAGGAGATACAACCAGTGAAAGAAGTCTCTCCTGCGCTCTTGAATGCGGCTCAATCCTTTCTTCCATATTATTCATCTTTTCAAAATCGAGATCCTAAATTCTGGGAGTTTGTAAAGAAGGCATGTGTCAAGCTGATGAAGGTGTTAGGTGCTATTCAAAGCAGGCATCCATTTTCGTTTGGAGATAAATGTGCTCTTCCAGTTGTAGTGGATTTCTGCTTAAACAAGATAACGGACCCCGAACAGGCATTGTTGCCATTTGAAGATTTTTTTATTCAGTGTATGGTGATGGTGAAATCTGTGCTTGAATGTAAAGAATATAAGCCAAGTCGAACTGGTCGTGTGATGGATGACAACGGAGATACATTTGAGCAGAGGAAGAAGAATGCTTCCAACACAGTTGGTGGCATTGTGTCGTCACTTTTACCCAATGAAAGGATAGTTCTTCTCTGCAACGTACTAGTGAGACGGTATTTTGTACTAACAGCAAGTGACCTAGAGGAGTGGTACCAGAACCCTGAGTCCTTTCATCATGAGCAGGACATGATTCAGTGGACAGAGAAATTGAGGCCTTGTGCTGAAGCTCTATATATGGTTTTGTTTGAGAACTACAGCCAACTGCTAGGACCTATTGTTGTGTCCATCCTTCAAGAAGCAATGAATAATTGTCCCCCTTCTGTTACTGAAATAACTCCTGCACTGCTTCTTAAAGATGCGGCATACGCTGCTACTGCATATGTCTACTATGAGCTCTCGAATTATCTTAATTTCAGAGATTGGTTTAATGGTGCTCTATCCCTTGAACTCTCAAATGACCATCCAAATAGGCGTATCATCCACCGAAAAGTTGCTATGATATTGGGACATTGGGTTTCGGAGATTAAGGATGACACAAAAAGAGCAGTTTATTGTGCTTTGATCAAATTGTTGCAAGACAATGACCTCGCTGTAAAGCTGGCAGCTAGTAGGTCATTATGCTTACATGTCGAGGATGCAAATTTTTCGGAGCAAAGTTTTCTTGATCTTCTTCCAATCTGTTGGGATTCATGTTTCAAAATGGTCGAGGTAGTTCAAGAGTTTGATTCGAAGGTTCAAATTCTGAATTTGATTTCTACTCTTATTGGCCATGTTAGCGAAGTCATTCCGTACGCACAAAAGTTGGTGCAATTCTTCCAGAAGGTTTGGGAGGAATCTTCTGGTGAAAGCCTTCTGCAGATCCAGCTTCTTGTCGCACTGCGAAATTTTGTGATTGCACTTGGTTATCAGTCTCCCATTTGCTATAGCATACTGCTCCCAATACTCCAAAAGGGCATTGACATAAATAGCCCTGATTCACTCAACCTTCTGGAGGATAGCATGGCATTATGGGAAACCACACTTTCCTATGCTCCTATGATGGTGCCCCAGCTATTAGCATTGTTTCCCTATATGGTGGAGATCATTGAAAGAAGTTTTGATCATTTACAGGTTGCTGTCAGTATCATGGATTCGTATATCATTTTGGATGGAGGAGAATTTCTAAATATGCATGCTTCAAGTGTCGCAAAAATTCTTGATCTTATCGTTGGAAATGTAAATGATAAGGGTTTACTCTCGATTCTTCCAGTGATTGACATCTTAGTTCAGTGTTTTCCTGTGGAAGTGCCCCCTCTCATCAGCAGCTGTTTGCAGAAACTGGTGATTATTTGCTTGAGTGGTGGAGATGACCGTGATCCATCCAAGACTGCAGTTAAAGTGTCTTCAGCAGCTATCCTTGCAAGGATTCTGGTGATGAACACCACTTACCTGGCCCAGCTAACATCTGATTCATCTCTTTCAGTGTTACTCCAACAGGCAGGTGTCCCAGTCGAAGACAATATACTCCTTTGCCTCATCGACATTTGGCTCGACAAGGTGGACCATGCGTCTCCCATGCAACAAAAGACATTTGGCTTGGCTCTTTCCATAATACTTACACTTAGAATGCCCCAAGTTCTTGACAAGCTTGATCTAATACTAAGTACATGCACCAGTGTGATCCTTGGTGAAAACAAAGATTTAACAGAAGAAGAATCAAGCGGTGACATGAGTTCAAGCAGGTCTCAAGGAGAAGAAACCCCGCCAAGCAAAGAGTTACGGAAAAGTCAGATAAAAGTTTCCGACCCAATCTACCAGATGTCACTAGAGAACTCAACGCGTGAGAACCTTCAGACATGTTCTACACTTCATGGAGATGCCTTTAATTCTGCCATTAGTAGGATGCACCCATCGGCGCTTGCACAAGTGAAGCAAGCCTTAAAGCTGCCGTGA

Protein Analysis

1010

Amino Acids

113.97

Weight (kDa)

5.39

Isoelectric Point (pI)

53.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBN_N PF03810 29 - 102 3.9e-16 Importin-beta N-terminal domain
TPR_IPO11 PF25758 655 - 1007 9.5e-69 Importin-11-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2570
Acc36I ACCTGC 2 cut(s) 2570, 2811
Acc65I GGTACC 1 cut(s) 1251
AccB1I GGYRCC 3 cut(s) 558, 1251, 2143
AccBSI CCGCTC 1 cut(s) 60
AccI GTMKAC 3 cut(s) 115, 488, 1485
AccII CGCG 1 cut(s) 2920
AclWI GGATC 5 cut(s) 516, 830, 1954, 2450, 2755
AcoI YGGCCR 2 cut(s) 80, 1867
AcsI RAATTY 8 cut(s) 244, 842, 1741, 1839, 1846, 1984, 2258, 2292
AcuI CTGAAG 3 cut(s) 1344, 2469, 2915
AfaI GTAC 7 cut(s) 35, 405, 1203, 1224, 1253, 1892, 2746
AfiI CCNNNNNNNGG 6 cut(s) 78, 328, 988, 1179, 2092, 2979
AflIII ACRYGT 3 cut(s) 1726, 2918, 2936
AhdI GACNNNNNGTC 1 cut(s) 2647
AhlI ACTAGT 1 cut(s) 1204
AjnI CCWGG 2 cut(s) 118, 2529
AleI CACNNNNGTG 1 cut(s) 2756
AloI GAACNNNNNNTCC 2 cut(s) 1250, 1282
Alw21I GWGCWC 3 cut(s) 940, 1497, 1537
Alw26I GTCTC 8 cut(s) 62, 303, 503, 775, 1204, 2016, 2655, 2829
AlwI GGATC 5 cut(s) 516, 830, 1954, 2450, 2755
AlwNI CAGNNNCTG 2 cut(s) 2406, 2419
AoxI GGCC 6 cut(s) 80, 192, 386, 1313, 1867, 2532
ApeKI GCWGC 6 cut(s) 640, 1469, 1703, 2403, 2489, 3025
ApoI RAATTY 8 cut(s) 244, 842, 1741, 1839, 1846, 1984, 2258, 2292
AseI ATTAAT 1 cut(s) 188
Asp700I GAANNNNTTC 4 cut(s) 244, 518, 1884, 1950
Asp718I GGTACC 1 cut(s) 1251
AspA2I CCTAGG 1 cut(s) 377
AspLEI GCGC 4 cut(s) 412, 702, 781, 2998
AspS9I GGNCC 4 cut(s) 979, 1370, 2533, 2641
AsuHPI GGTGA 8 cut(s) 74, 1042, 1048, 1955, 2434, 2524, 2780, 2816
AsuII TTCGAA 2 cut(s) 469, 1829
AvaII GGWCC 3 cut(s) 979, 1370, 2641
AvrII CCTAGG 1 cut(s) 377
BaeGI GKGCMC 2 cut(s) 2148, 2391
BalI TGGCCA 1 cut(s) 1869
BanI GGYRCC 3 cut(s) 558, 1251, 2143
BanII GRGCYC 1 cut(s) 1497
BarI GAAGNNNNNNTAC 2 cut(s) 2586, 2618
BbsI GAAGAC 3 cut(s) 521, 2475, 2601
Bbv12I GWGCWC 3 cut(s) 940, 1497, 1537
BbvI GCAGC 6 cut(s) 652, 1456, 1715, 2415, 2501, 3012
BccI CCATC 8 cut(s) 1027, 1084, 1394, 1569, 2134, 2243, 2467, 2998
BceAI ACGGC 1 cut(s) 3013
BcgI CGANNNNNNTGC 2 cut(s) 1728, 1762
BciT130I CCWGG 2 cut(s) 120, 2531
BclI TGATCA 2 cut(s) 1662, 2200
BcoDI GTCTC 8 cut(s) 62, 303, 503, 775, 1204, 2016, 2655, 2829
BcuI ACTAGT 1 cut(s) 1204
BfaI CTAG 7 cut(s) 378, 407, 1205, 1241, 1367, 1707, 2906
BfmI CTRYAG 4 cut(s) 1354, 1955, 2023, 2469
BfoI RGCGCY 1 cut(s) 2999
BfuAI ACCTGC 2 cut(s) 2570, 2811
BglII AGATCT 1 cut(s) 528
BlnI CCTAGG 1 cut(s) 377
Bme1390I CCNGG 2 cut(s) 120, 2531
Bme18I GGWCC 3 cut(s) 979, 1370, 2641
BmeRI GACNNNNNGTC 1 cut(s) 2647
BmgT120I GGNCC 4 cut(s) 979, 1370, 2533, 2641
BmiI GGNNCC 4 cut(s) 560, 981, 1253, 2145
BmrFI CCNGG 2 cut(s) 120, 2531
BmrI ACTGGG 1 cut(s) 2582
BmsI GCATC 8 cut(s) 161, 652, 721, 919, 1447, 1726, 2947, 2973
BmuI ACTGGG 1 cut(s) 2582
BpiI GAAGAC 3 cut(s) 521, 2475, 2601
BpmI CTGGAG 1 cut(s) 2111
Bpu14I TTCGAA 2 cut(s) 469, 1829
BpuEI CTTGAG 3 cut(s) 325, 2455, 2811
BsaBI GATNNNNATC 1 cut(s) 2357
BsaI GGTCTC 2 cut(s) 62, 2829
BsaJI CCNNGG 3 cut(s) 156, 377, 2764
Bsc4I CCNNNNNNNGG 6 cut(s) 78, 328, 988, 1179, 2092, 2979
Bse118I RCCGGY 2 cut(s) 25, 82
Bse1I ACTGG 7 cut(s) 758, 944, 1084, 2348, 2424, 2588, 2754
Bse3DI GCAATG 1 cut(s) 1407
Bse8I GATNNNNATC 1 cut(s) 2357
BseBI CCWGG 2 cut(s) 120, 2531
BseDI CCNNGG 3 cut(s) 156, 377, 2764
BseJI GATNNNNATC 1 cut(s) 2357
BseLI CCNNNNNNNGG 6 cut(s) 78, 328, 988, 1179, 2092, 2979
BseMI GCAATG 1 cut(s) 1407
BseMII CTCAG 5 cut(s) 210, 272, 438, 516, 1254
BseNI ACTGG 7 cut(s) 758, 944, 1084, 2348, 2424, 2588, 2754
BseRI GAGGAG 2 cut(s) 1259, 2268
BseSI GKGCMC 2 cut(s) 2148, 2391
BseX3I CGGCCG 1 cut(s) 80
BseXI GCAGC 6 cut(s) 652, 1456, 1715, 2415, 2501, 3012
BseYI CCCAGC 2 cut(s) 2148, 2535
BsgI GTGCAG 1 cut(s) 1425
Bsh1236I CGCG 1 cut(s) 2920
Bsh1285I CGRYCG 1 cut(s) 83
BshFI GGCC 6 cut(s) 82, 194, 388, 1315, 1869, 2534
BshNI GGYRCC 3 cut(s) 558, 1251, 2143
BsiEI CGRYCG 1 cut(s) 83
BsiHKAI GWGCWC 3 cut(s) 940, 1497, 1537
BsiSI CCGG 2 cut(s) 26, 83
BsiWI CGTACG 1 cut(s) 1890
BslFI GGGAC 4 cut(s) 154, 1398, 1620, 2570
BslI CCNNNNNNNGG 6 cut(s) 78, 328, 988, 1179, 2092, 2979
BsmAI GTCTC 8 cut(s) 62, 303, 503, 775, 1204, 2016, 2655, 2829
BsmBI CGTCTC 3 cut(s) 503, 1204, 2655
BsmFI GGGAC 4 cut(s) 154, 1398, 1620, 2570
BsmI GAATGC 3 cut(s) 793, 1135, 2712
BsnI GGCC 6 cut(s) 82, 194, 388, 1315, 1869, 2534
Bso31I GGTCTC 2 cut(s) 62, 2829
Bsp119I TTCGAA 2 cut(s) 469, 1829
Bsp1286I GDGCHC 5 cut(s) 940, 1497, 1537, 2148, 2391
Bsp1407I TGTACA 1 cut(s) 33
BspANI GGCC 6 cut(s) 82, 194, 388, 1315, 1869, 2534
BspCNI CTCAG 5 cut(s) 209, 273, 437, 517, 1255
BspFNI CGCG 1 cut(s) 2920
BspHI TCATGA 1 cut(s) 1276
BspLI GGNNCC 4 cut(s) 560, 981, 1253, 2145
BspMAI CTGCAG 2 cut(s) 1959, 2473
BspMI ACCTGC 2 cut(s) 2570, 2811
BspPI GGATC 5 cut(s) 516, 830, 1954, 2450, 2755
BspQI GCTCTTC 2 cut(s) 227, 945
BspT104I TTCGAA 2 cut(s) 469, 1829
BspT107I GGYRCC 3 cut(s) 558, 1251, 2143
BspTNI GGTCTC 2 cut(s) 62, 2829
BsrBI CCGCTC 1 cut(s) 60
BsrDI GCAATG 1 cut(s) 1407
BsrFI RCCGGY 2 cut(s) 25, 82
BsrGI TGTACA 1 cut(s) 33
BsrI ACTGG 7 cut(s) 758, 944, 1084, 2348, 2424, 2588, 2754
BssAI RCCGGY 2 cut(s) 25, 82
BssECI CCNNGG 3 cut(s) 156, 377, 2764
BssT1I CCWWGG 3 cut(s) 156, 377, 2764
Bst2UI CCWGG 2 cut(s) 120, 2531
Bst4CI ACNGT 6 cut(s) 73, 215, 224, 1144, 1215, 2453
Bst6I CTCTTC 3 cut(s) 227, 306, 945
BstAPI GCANNNNNTGC 1 cut(s) 1469
BstAUI TGTACA 1 cut(s) 33
BstBI TTCGAA 2 cut(s) 469, 1829
BstC8I GCNNGC 7 cut(s) 27, 84, 908, 1701, 2274, 3000, 3015
BstDEI CTNAG 9 cut(s) 196, 281, 424, 525, 725, 1263, 2362, 2702, 2741
BstENI CCTNNNNNAGG 1 cut(s) 2090
BstFNI CGCG 1 cut(s) 2920
BstH2I RGCGCY 1 cut(s) 2999
BstHHI GCGC 4 cut(s) 412, 702, 781, 2998
BstMAI GTCTC 8 cut(s) 62, 303, 503, 775, 1204, 2016, 2655, 2829
BstMCI CGRYCG 1 cut(s) 83
BstMWI GCNNNNNNNGC 9 cut(s) 11, 92, 565, 1466, 1469, 1475, 1875, 1963, 2498
BstNI CCWGG 2 cut(s) 120, 2531
BstNSI RCATGY 5 cut(s) 870, 1730, 2276, 2751, 2940
BstSCI CCNGG 2 cut(s) 118, 2529
BstSFI CTRYAG 4 cut(s) 1354, 1955, 2023, 2469
BstSLI GKGCMC 2 cut(s) 2148, 2391
BstUI CGCG 1 cut(s) 2920
BstV1I GCAGC 6 cut(s) 652, 1456, 1715, 2415, 2501, 3012
BstV2I GAAGAC 3 cut(s) 521, 2475, 2601
BstX2I RGATCY 3 cut(s) 528, 835, 1959
BstXI CCANNNNNNTGG 3 cut(s) 163, 1782, 2530
BstYI RGATCY 3 cut(s) 528, 835, 1959
BstZI CGGCCG 1 cut(s) 80
BsuRI GGCC 6 cut(s) 82, 194, 388, 1315, 1869, 2534
BtgZI GCGATG 2 cut(s) 44, 744
BtsI GCAGTG 3 cut(s) 501, 1442, 1976
BveI ACCTGC 2 cut(s) 2570, 2811
Cac8I GCNNGC 7 cut(s) 27, 84, 908, 1701, 2274, 3000, 3015
CaiI CAGNNNCTG 2 cut(s) 2406, 2419
CciI TCATGA 1 cut(s) 1276
CfoI GCGC 4 cut(s) 412, 702, 781, 2998
Cfr10I RCCGGY 2 cut(s) 25, 82
Cfr13I GGNCC 4 cut(s) 979, 1370, 2533, 2641
CseI GACGC 1 cut(s) 2637
CsiI ACCWGGT 1 cut(s) 118
Csp6I GTAC 7 cut(s) 34, 404, 1202, 1223, 1252, 1891, 2745
CviQI GTAC 7 cut(s) 34, 404, 1202, 1223, 1252, 1891, 2745
DdeI CTNAG 9 cut(s) 196, 281, 424, 525, 725, 1263, 2362, 2702, 2741
DriI GACNNNNNGTC 1 cut(s) 2647
EaeI YGGCCR 2 cut(s) 80, 1867
EagI CGGCCG 1 cut(s) 80
Eam1104I CTCTTC 3 cut(s) 227, 306, 945
Eam1105I GACNNNNNGTC 1 cut(s) 2647
EarI CTCTTC 3 cut(s) 227, 306, 945
EciI GGCGGA 1 cut(s) 101
Ecl136II GAGCTC 1 cut(s) 1495
EclXI CGGCCG 1 cut(s) 80
Eco130I CCWWGG 3 cut(s) 156, 377, 2764
Eco147I AGGCCT 1 cut(s) 1315
Eco24I GRGCYC 1 cut(s) 1497
Eco31I GGTCTC 2 cut(s) 62, 2829
Eco47I GGWCC 3 cut(s) 979, 1370, 2641
Eco52I CGGCCG 1 cut(s) 80
Eco53kI GAGCTC 1 cut(s) 1495
Eco57I CTGAAG 3 cut(s) 1344, 2469, 2915
EcoICRI GAGCTC 1 cut(s) 1495
EcoNI CCTNNNNNAGG 1 cut(s) 2090
EcoO109I RGGNCCY 1 cut(s) 1370
EcoRII CCWGG 2 cut(s) 118, 2529
EcoT14I CCWWGG 3 cut(s) 156, 377, 2764
EcoT22I ATGCAT 1 cut(s) 2274
EcoT38I GRGCYC 1 cut(s) 1497
ErhI CCWWGG 3 cut(s) 156, 377, 2764
Esp3I CGTCTC 3 cut(s) 503, 1204, 2655
FalI AAGNNNNNCTT 1 cut(s) 3002
FaqI GGGAC 4 cut(s) 154, 1398, 1620, 2570
FauI CCCGC 1 cut(s) 2850
FauNDI CATATG 1 cut(s) 1480
FbaI TGATCA 2 cut(s) 1662, 2200
FblI GTMKAC 3 cut(s) 115, 488, 1485
FriOI GRGCYC 1 cut(s) 1497
FspBI CTAG 7 cut(s) 378, 407, 1205, 1241, 1367, 1707, 2906
GlaI GCGC 4 cut(s) 411, 701, 780, 2997
GsaI CCCAGC 2 cut(s) 2152, 2539
GsuI CTGGAG 1 cut(s) 2111
HaeII RGCGCY 1 cut(s) 2999
HaeIII GGCC 6 cut(s) 82, 194, 388, 1315, 1869, 2534
HapII CCGG 2 cut(s) 26, 83
HgaI GACGC 1 cut(s) 2637
HhaI GCGC 4 cut(s) 412, 702, 781, 2998
Hin6I GCGC 4 cut(s) 410, 700, 779, 2996
HinP1I GCGC 4 cut(s) 410, 700, 779, 2996
HindIII AAGCTT 1 cut(s) 2726
HpaII CCGG 2 cut(s) 26, 83
HphI GGTGA 8 cut(s) 74, 1042, 1048, 1955, 2434, 2524, 2780, 2816
Hpy166II GTNNAC 8 cut(s) 36, 116, 178, 489, 1299, 1486, 2333, 2641
Hpy8I GTNNAC 8 cut(s) 36, 116, 178, 489, 1299, 1486, 2333, 2641
Hpy99I CGWCG 1 cut(s) 538
HpyCH4III ACNGT 6 cut(s) 73, 215, 224, 1144, 1215, 2453
HpyCH4IV ACGT 4 cut(s) 180, 432, 496, 1200
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 92, 565, 1466, 1469, 1475, 1875, 1963, 2498
HpyF3I CTNAG 9 cut(s) 196, 281, 424, 525, 725, 1263, 2362, 2702, 2741
HpySE526I ACGT 4 cut(s) 180, 432, 496, 1200
HspAI GCGC 4 cut(s) 410, 700, 779, 2996
KpnI GGTACC 1 cut(s) 1255
KroI GCCGGC 2 cut(s) 25, 82
KroNI GCCGGC 2 cut(s) 27, 84
Ksp22I TGATCA 2 cut(s) 1662, 2200
LguI GCTCTTC 2 cut(s) 227, 945
LmnI GCTCC 3 cut(s) 1750, 2040, 2137
Lsp1109I GCAGC 6 cut(s) 652, 1456, 1715, 2415, 2501, 3012
LweI GCATC 8 cut(s) 161, 652, 721, 919, 1447, 1726, 2947, 2973
MabI ACCWGGT 1 cut(s) 118
MaeI CTAG 7 cut(s) 378, 407, 1205, 1241, 1367, 1707, 2906
MaeII ACGT 4 cut(s) 180, 432, 496, 1200
MaeIII GTNAC 8 cut(s) 62, 1161, 1235, 1423, 2565, 2804, 2856, 2901
MbiI CCGCTC 1 cut(s) 60
MflI RGATCY 3 cut(s) 528, 835, 1959
MhlI GDGCHC 5 cut(s) 940, 1497, 1537, 2148, 2391
MlsI TGGCCA 1 cut(s) 1869
MluI ACGCGT 1 cut(s) 2918
MluNI TGGCCA 1 cut(s) 1869
MlyI GAGTC 2 cut(s) 283, 1274
MmeI TCCRAC 5 cut(s) 87, 1161, 2290, 2596, 2907
Mox20I TGGCCA 1 cut(s) 1869
Mph1103I ATGCAT 1 cut(s) 2274
MroNI GCCGGC 2 cut(s) 25, 82
MroXI GAANNNNTTC 4 cut(s) 244, 518, 1884, 1950
MscI TGGCCA 1 cut(s) 1869
MslI CAYNNNNRTG 3 cut(s) 648, 2756, 2955
Msp20I TGGCCA 1 cut(s) 1869
MspA1I CMGCKG 2 cut(s) 428, 2406
MspI CCGG 2 cut(s) 26, 83
MspR9I CCNGG 2 cut(s) 120, 2531
Mva1269I GAATGC 3 cut(s) 793, 1135, 2712
MvaI CCWGG 2 cut(s) 120, 2531
MvnI CGCG 1 cut(s) 2920
MwoI GCNNNNNNNGC 9 cut(s) 11, 92, 565, 1466, 1469, 1475, 1875, 1963, 2498
NaeI GCCGGC 2 cut(s) 27, 84
NdeI CATATG 1 cut(s) 1480
NgoMIV GCCGGC 2 cut(s) 25, 82
NlaIV GGNNCC 4 cut(s) 560, 981, 1253, 2145
NmeAIII GCCGAG 1 cut(s) 661
NmuCI GTSAC 5 cut(s) 62, 1161, 1235, 2804, 2901
NsiI ATGCAT 1 cut(s) 2274
NspI RCATGY 5 cut(s) 870, 1730, 2276, 2751, 2940
NspV TTCGAA 2 cut(s) 469, 1829
OliI CACNNNNGTG 1 cut(s) 2756
PaeI GCATGC 1 cut(s) 2276
PagI TCATGA 1 cut(s) 1276
PaqCI CACCTGC 1 cut(s) 2570
PceI AGGCCT 1 cut(s) 1315
PciI ACATGT 2 cut(s) 1726, 2936
PciSI GCTCTTC 2 cut(s) 227, 945
PcsI WCGNNNNNNNCGW 1 cut(s) 1081
PctI GAATGC 3 cut(s) 793, 1135, 2712
PdiI GCCGGC 2 cut(s) 27, 84
PdmI GAANNNNTTC 4 cut(s) 244, 518, 1884, 1950
Pfl23II CGTACG 1 cut(s) 1890
PleI GAGTC 2 cut(s) 282, 1273
PpsI GAGTC 2 cut(s) 282, 1273
PpuMI RGGWCCY 1 cut(s) 1370
PscI ACATGT 2 cut(s) 1726, 2936
PshBI ATTAAT 1 cut(s) 188
Psp124BI GAGCTC 1 cut(s) 1497
Psp5II RGGWCCY 1 cut(s) 1370
Psp6I CCWGG 2 cut(s) 118, 2529
PspFI CCCAGC 2 cut(s) 2148, 2535
PspGI CCWGG 2 cut(s) 118, 2529
PspLI CGTACG 1 cut(s) 1890
PspN4I GGNNCC 4 cut(s) 560, 981, 1253, 2145
PspPI GGNCC 4 cut(s) 979, 1370, 2533, 2641
PspPPI RGGWCCY 1 cut(s) 1370
PsrI GAACNNNNNNTAC 2 cut(s) 2510, 2542
PstI CTGCAG 2 cut(s) 1959, 2473
PstNI CAGNNNCTG 2 cut(s) 2406, 2419
PsuI RGATCY 3 cut(s) 528, 835, 1959
PvuII CAGCTG 2 cut(s) 428, 2406
RsaI GTAC 7 cut(s) 35, 405, 1203, 1224, 1253, 1892, 2746
RsaNI GTAC 7 cut(s) 34, 404, 1202, 1223, 1252, 1891, 2745
RseI CAYNNNNRTG 3 cut(s) 648, 2756, 2955
SacI GAGCTC 1 cut(s) 1497
SapI GCTCTTC 2 cut(s) 227, 945
Sau96I GGNCC 4 cut(s) 979, 1370, 2533, 2641
SchI GAGTC 2 cut(s) 283, 1274
ScrFI CCNGG 2 cut(s) 120, 2531
SduI GDGCHC 5 cut(s) 940, 1497, 1537, 2148, 2391
SexAI ACCWGGT 1 cut(s) 118
SfaNI GCATC 8 cut(s) 161, 652, 721, 919, 1447, 1726, 2947, 2973
SfcI CTRYAG 4 cut(s) 1354, 1955, 2023, 2469
SfuI TTCGAA 2 cut(s) 469, 1829
SinI GGWCC 3 cut(s) 979, 1370, 2641
SmiMI CAYNNNNRTG 3 cut(s) 648, 2756, 2955
SmlI CTYRAG 3 cut(s) 304, 2434, 2826
SmoI CTYRAG 3 cut(s) 304, 2434, 2826
SpeI ACTAGT 1 cut(s) 1204
SphI GCATGC 1 cut(s) 2276
SseBI AGGCCT 1 cut(s) 1315
SspMI CTAG 7 cut(s) 378, 407, 1205, 1241, 1367, 1707, 2906
SstI GAGCTC 1 cut(s) 1497
StuI AGGCCT 1 cut(s) 1315
StyD4I CCNGG 2 cut(s) 118, 2529
StyI CCWWGG 3 cut(s) 156, 377, 2764
TaaI ACNGT 6 cut(s) 73, 215, 224, 1144, 1215, 2453
TaiI ACGT 4 cut(s) 183, 435, 499, 1203
TatI WGTACW 3 cut(s) 33, 1222, 2744
TauI GCSGC 4 cut(s) 82, 95, 794, 1463
TseFI GTSAC 5 cut(s) 62, 1161, 1235, 2804, 2901
TseI GCWGC 6 cut(s) 640, 1469, 1703, 2403, 2489, 3025
Tsp45I GTSAC 5 cut(s) 62, 1161, 1235, 2804, 2901
TspGWI ACGGA 4 cut(s) 992, 1116, 1878, 2875
VpaK11BI GGWCC 3 cut(s) 979, 1370, 2641
VspI ATTAAT 1 cut(s) 188
XagI CCTNNNNNAGG 1 cut(s) 2090
XapI RAATTY 8 cut(s) 244, 842, 1741, 1839, 1846, 1984, 2258, 2292
XceI RCATGY 5 cut(s) 870, 1730, 2276, 2751, 2940
XmaJI CCTAGG 1 cut(s) 377
XmiI GTMKAC 3 cut(s) 115, 488, 1485
XmnI GAANNNNTTC 4 cut(s) 244, 518, 1884, 1950
XspI CTAG 7 cut(s) 378, 407, 1205, 1241, 1367, 1707, 2906
Zsp2I ATGCAT 1 cut(s) 2274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.