Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0003769

Physical Location & Seq

Genomic Coordinates Forward (+)

1671340 .. 1689270

Gene Structure 17931 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G000860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3033 bp

ATGGCGCTATCGGCGTCTGACCTACCGGCCATGTTCTCGTTGCTGAGTAACTCATTGAGTGGTGATGAGAGTGTCCGGAAACCGGCAGAGGCGGCGCTCTCTCAGTCGGAGGCGAGGCCTGGTTTCTGCTCTTGTCTCATGGAAGTCATAACAGCCAAGGATTTGGCACCTCATGTAGATGTTCGCTTGATGGCTTCAGTGTATTTCAAAAATAGTATTAATCGTTACTGGAGGCACAGGCGTGATTCCTCGGGAATTAGCAACGAGGAGAAGCTATATCTCAGACAAAAACTCTTATCACACTTCGGGGAAGAGAGCAATCAGATAGCGCAAATGTTGGCTGTGCTTGTTTCCAAAATTGCTCGTATAGATTACCCGAGAGAATGGCCTGAGCTCTTTTCTGTTTTAGCACAGAAGCTTCAATCAGCAGATATTCTTTCTTCGCACAGAATTTTTTTGACCCTCTTTCGAACCTTGAAGGAGTTGTCCACCAAGCGTCTCATCTCAGACCAAAAGAACTTTGCAGAGATATCAGCTCGCTTCTTTGATTATAGCTGGCACCTTTGGCAGACGGATGTGCAAACGTTGTTACATGGTTTTTCTACATTGACTCAAAGCTACAACTCAAATACATTGGAGCAACATCACGATGATCTTTATCTAACATGTGAGCGATGGCTGTTGTGCCTAAAGATAATACGCCAATTAATAGTTTCAGGTTTTCCAAGTGACGCAAAATGTGTACAGGAGGTCCGACCAGTCATGGAGGTCTCGCCCATGCTCTTGAATGCCATTCAGTCATTTCTCCCATACTATTCATCTTTTCAGAAAGGACATCCTAAATTTTTGGACTTCCTAAAGAGGGCTTGTACTAAACTGATGAAGGTTTTAATTGCACTTCAGGGCAGGCATCCTTATTCATTTAGTGATAAATGTGTCCTTCCGACTGTAGTTGATTTCTGTTTACAGAAGATAACAGATCCTGATCCAGATGTATTATCCTTTGAGCAGTTTCTGATTCAATGTATGGTAATGATTAAATCTATATTAGAATGTAAAGAGTACAAGCCAAGTCTCACTGGTCGGGTGATGGATGAAAATGGCGTTACACTGGAGCAAATGAAGAAAAATATATCTGGTGCTGTCAGTGGCATCTTGACTTCCCTCATGACAAGTGAACGCATTATAGTCTTGTGTAATACACTGATAAGAAGGTATTTTGTTCTAACAACAAGTGATTTGGAAGAGTGGTACCAGAATCCTGAATCTTTTCATCATGAGCAGGATATGGTTCAGTGGACAGAAAAATTAAGGCCATGTGCTGAAGCTTTATACATTGTTCTTTTTGAAAACCACAGCCAGCTCCTAGGGCCTGTTGTGGTTTCCATCCTTCAAGAGGCAATGAATGGCTGCCCATCTTCAGTGACTGAAATCACTCCAGGGTTGCTTCTTAAAGATGCTGCTTATGGTGCTGCTGCATATGTTTATTACGAACTCTCAAATTACCTGAGCTTTAAAGATTGGTTTAATGGTGCATTATCCCTTGAACTCTCAAATGATCATCCAAATATGCGTATCATCCACCGGAAAGTTGCACTAATTTTGGGTCAATGGGTTTCTGAGATTAAAGAGGACACAAAGAGGCCAGTTTACTGTGCTTTAATCCGATTACTACAGGACAAAGACCTATCTGTTAGGTTGGCAGCCTGTAGGTCTCTGTGTTCGCATATTGAAGATGCTAGCTTTTCAGAAGGAGAATTCGTTGATCTTCTACCTATATGTTGGGATTCAAGTTTTAGGTTGATTGAGGAAGTTCAGGAGTTTGACTCGAAGGTTCAGGTTTTGAATTTGATATCTGTTCTCATTGGACATGTGACTGAAGTTATTCCGTTCGCAAACAAGCTTGTTCTATTTTTTCAGAAGGTTTGGGAGGAATCTTCTGGTGAATGCCTTCTGCAGATTCAACTTCTCGTTGCATTGAAGAACTTTGTGGTCGCACTTGGTTACCAATCACCTCTTTGCTACAACATATTGCTGCCCGTTCTGCAAAAGGGAATCGATATAAATAGCCCTGATGAACTCAATCTTCTAGAGGATAGCATGCTGTTATGGGAAGCCACACTTTCTCAAGCCCCTTCAATGGTGCCTCAACTACTAGCATACTTCCCTTGTTTAGTTGACATTCTGGAAAGAAGTTTTGATCACCTGCAGGTTGCTGTCACTATAATTGAAGATTACATTATCTTAGGTGGATCGGAATTTTTGAGTATGCATGCATCAAGTGTGGCTAAAATACTAGATCTGGTTGTTGGGAATGTCAATGATAGGGGACTTCTGTCAACTCTCCCTGTCATTGATATTCTAATACAGTGTTTCCCTACAGAAGTACCACAGTTGATCAGCAGTGCATTACAAAAATTAATTGTTATATGCATAACTGGAGCTGATGACCGAGATCCTTCTAAGGCCACTGTTAAAGCATCTTCGGCTGCCATCTTGGCAAGAATATTGGTTATGAATACCAATTACCTAGCACACTTGACGTCTGAGCCATCACTTTTGTTGCTCCTTCAAAAGTCGGGTGTCCCAATTGAAGAAAATATACTTCTTTCTCTCGTTGACATATGGCTTGACAAGGTAGATAATGTATCTTCAGTCCAAAGGAAGACATATGGCTTGGCCCTTTCTATTATTCTAACATTAAGACTTCCTCAAGTCCTCGTTAAACTTGATCAGATTCTGAGTGTGTGTACAACTGTAATTTTGGGTGGCAATGATGACTTAGTAGAGGAGTCCAGTGGTGATAGTATAAGCTCCAGCGGGTCTCTTAGTAAGGACAGCATTCCGAGTAAAGAATTGCGAAGAAGACAGGTCAAGTTTTCAGACCCTATAAACCATATGTCTCTGGAGGCTTCAGTAAGGGAAAACCTTCAAACATGTGCTGCCCTTCATGGAGAATCTTTTAGTAAGGCCATTGGTAACATGCATCCCTCGGCCCTTACACAGTTGAAGCAGGCATTAAAGATGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001650 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005829 GO:0006810 GO:0008104 GO:0008150 GO:0008565 GO:0012505 GO:0015031 GO:0015833 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0045184 GO:0051179 GO:0051234 GO:0070013 GO:0071702 GO:0071705

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N Xpo1

Protein Analysis

1010

Amino Acids

113.44

Weight (kDa)

5.54

Isoelectric Point (pI)

48.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	29 - 103	5.1e-15	Importin-beta N-terminal domain
TPR_IPO11	PF25758	655 - 1007	6.9e-71	Importin-11-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08960 AT3G08960 AT3G08960
fragaria_vesca	FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010
malus_domestica	MD04G1000200.v1.1 MD04G1000400.v1.1
prunus_persica	Prupe.1G000100_v2.0.a1 Prupe.1G000100_v2.0.a1 Prupe.1G000300_v2.0.a1 Prupe.1G000300_v2.0.a1
pyrus_communis	pycom04g00040 pycom04g00060 pycom04g00090
rosa_laevigata	RLG00000010280
rosa_multiflora	Rmu_sc0006822.1_g000022 Rmu_sc0020186.1_g000001
rosa_roxburghii	Rroxscaffold_5G00332670
rosa_rugosa	Rorug03G0296500
rosa_samantha	Rh4AG000300 Rh4BG000300 Rh4CG000100 Rh4DG000500
rosa_wichuraiana	Rw4G000860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2214
AatII	GACGTC	1 cut(s)	2546
Acc36I	ACCTGC	2 cut(s)	2200, 2214
Acc65I	GGTACC	1 cut(s)	1251
AccB1I	GGYRCC	4 cut(s)	166, 558, 1251, 2143
AccIII	TCCGGA	1 cut(s)	75
AciI	CCGC	2 cut(s)	92, 2820
AclI	AACGTT	1 cut(s)	584
AclWI	GGATC	4 cut(s)	974, 980, 2260, 2450
AcoI	YGGCCR	1 cut(s)	27
AcsI	RAATTY	5 cut(s)	450, 842, 1757, 1846, 2258
AcuI	CTGAAG	7 cut(s)	180, 884, 1344, 1404, 1899, 2637, 2898
AcyI	GRCGYC	2 cut(s)	14, 2543
AfaI	GTAC	6 cut(s)	744, 871, 1064, 1253, 2388, 2752
AfiI	CCNNNNNNNGG	4 cut(s)	82, 862, 1396, 2140
AflIII	ACRYGT	3 cut(s)	665, 1870, 2936
AjnI	CCWGG	2 cut(s)	118, 1438
AleI	CACNNNNGTG	1 cut(s)	240
Alw21I	GWGCWC	1 cut(s)	396
Alw26I	GTCTC	7 cut(s)	140, 503, 775, 1079, 1719, 2829, 2907
AlwI	GGATC	4 cut(s)	974, 980, 2260, 2450
AlwNI	CAGNNNCTG	4 cut(s)	983, 1015, 1427, 2740
Ama87I	CYCGRG	2 cut(s)	250, 376
Aor13HI	TCCGGA	1 cut(s)	75
ApeKI	GCWGC	8 cut(s)	1410, 1460, 1472, 1475, 1703, 2035, 2489, 2942
ApoI	RAATTY	5 cut(s)	450, 842, 1757, 1846, 2258
AseI	ATTAAT	3 cut(s)	219, 707, 2420
Asp700I	GAANNNNTTC	4 cut(s)	1269, 1884, 1950, 2928
Asp718I	GGTACC	1 cut(s)	1251
AspA2I	CCTAGG	1 cut(s)	1366
AspLEI	GCGC	3 cut(s)	7, 97, 331
AspS9I	GGNCC	4 cut(s)	751, 1370, 2680, 2995
AsuHPI	GGTGA	6 cut(s)	74, 1099, 1955, 2004, 2195, 2813
AsuII	TTCGAA	1 cut(s)	469
AsuNHI	GCTAGC	1 cut(s)	1739
AvaI	CYCGRG	2 cut(s)	250, 376
AvaII	GGWCC	1 cut(s)	751
AvrII	CCTAGG	1 cut(s)	1366
BaeI	ACNNNNGTAYC	2 cut(s)	2370, 2403
BanI	GGYRCC	4 cut(s)	166, 558, 1251, 2143
BanII	GRGCYC	1 cut(s)	396
BarI	GAAGNNNNNNTAC	2 cut(s)	2586, 2618
BbsI	GAAGAC	2 cut(s)	2672, 2872
Bbv12I	GWGCWC	1 cut(s)	396
BbvI	GCAGC	8 cut(s)	1397, 1447, 1459, 1462, 1715, 2022, 2476, 2929
BccI	CCATC	8 cut(s)	184, 669, 1084, 1394, 1423, 2501, 2560, 3019
BciT130I	CCWGG	2 cut(s)	120, 1440
BclI	TGATCA	4 cut(s)	1558, 2200, 2397, 2731
BcoDI	GTCTC	7 cut(s)	140, 503, 775, 1079, 1719, 2829, 2907
BfaI	CTAG	6 cut(s)	1367, 1740, 2090, 2156, 2297, 2531
BfmI	CTRYAG	6 cut(s)	948, 1673, 1708, 1955, 2207, 2379
BfoI	RGCGCY	2 cut(s)	8, 98
BfuAI	ACCTGC	2 cut(s)	2200, 2214
BglI	GCCNNNNNGGC	1 cut(s)	2498
BglII	AGATCT	1 cut(s)	2299
BisI	GCNGC	9 cut(s)	93, 1411, 1461, 1473, 1476, 1704, 2036, 2490, 2943
BlnI	CCTAGG	1 cut(s)	1366
BlsI	GCNGC	9 cut(s)	94, 1412, 1462, 1474, 1477, 1705, 2037, 2491, 2944
Bme1390I	CCNGG	2 cut(s)	120, 1440
Bme18I	GGWCC	1 cut(s)	751
BmeT110I	CYCGRG	2 cut(s)	250, 376
BmgT120I	GGNCC	4 cut(s)	751, 1370, 2680, 2995
BmiI	GGNNCC	4 cut(s)	168, 560, 1253, 2145
BmrFI	CCNGG	2 cut(s)	120, 1440
BmsI	GCATC	7 cut(s)	919, 1161, 1447, 1726, 2285, 2489, 2995
BmtI	GCTAGC	1 cut(s)	1743
BoxI	GACNNNNGTC	1 cut(s)	2335
BpiI	GAAGAC	2 cut(s)	2672, 2872
BplI	GAGNNNNNCTC	2 cut(s)	1811, 1843
BpmI	CTGGAG	6 cut(s)	250, 1133, 1422, 2460, 2800, 2927
Bpu10I	CCTNAGC	2 cut(s)	390, 1508
Bpu14I	TTCGAA	1 cut(s)	469
BpuEI	CTTGAG	2 cut(s)	2112, 2697
Bsa29I	ATCGAT	1 cut(s)	2058
BsaBI	GATNNNNATC	2 cut(s)	657, 984
BsaHI	GRCGYC	2 cut(s)	14, 2543
BsaI	GGTCTC	3 cut(s)	775, 1719, 2829
BsaJI	CCNNGG	5 cut(s)	156, 249, 1366, 1439, 2991
BsaWI	WCCGGW	2 cut(s)	75, 1584
BsaXI	ACNNNNNCTCC	2 cut(s)	1746, 1776
Bsc4I	CCNNNNNNNGG	4 cut(s)	82, 862, 1396, 2140
Bse118I	RCCGGY	2 cut(s)	25, 82
Bse1I	ACTGG	7 cut(s)	233, 758, 1084, 1116, 1646, 2443, 2796
Bse3DI	GCAATG	2 cut(s)	1407, 2779
Bse8I	GATNNNNATC	2 cut(s)	657, 984
BseAI	TCCGGA	1 cut(s)	75
BseBI	CCWGG	2 cut(s)	120, 1440
BseCI	ATCGAT	1 cut(s)	2058
BseDI	CCNNGG	5 cut(s)	156, 249, 1366, 1439, 2991
BseGI	GGATG	8 cut(s)	580, 835, 910, 1099, 1386, 1561, 1578, 2986
BseJI	GATNNNNATC	2 cut(s)	657, 984
BseLI	CCNNNNNNNGG	4 cut(s)	82, 862, 1396, 2140
BseMI	GCAATG	2 cut(s)	1407, 2779
BseMII	CTCAG	9 cut(s)	35, 116, 295, 381, 519, 1499, 1611, 2538, 2732
BseNI	ACTGG	7 cut(s)	233, 758, 1084, 1116, 1646, 2443, 2796
BseRI	GAGGAG	2 cut(s)	281, 2804
BseXI	GCAGC	8 cut(s)	1397, 1447, 1459, 1462, 1715, 2022, 2476, 2929
BshNI	GGYRCC	4 cut(s)	166, 558, 1251, 2143
BshVI	ATCGAT	1 cut(s)	2058
BsiHKAI	GWGCWC	1 cut(s)	396
BsiHKCI	CYCGRG	2 cut(s)	250, 376
BsiSI	CCGG	4 cut(s)	26, 76, 83, 1585
BslFI	GGGAC	2 cut(s)	2343, 2570
BslI	CCNNNNNNNGG	4 cut(s)	82, 862, 1396, 2140
BsmAI	GTCTC	7 cut(s)	140, 503, 775, 1079, 1719, 2829, 2907
BsmBI	CGTCTC	1 cut(s)	503
BsmFI	GGGAC	2 cut(s)	2343, 2570
BsmI	GAATGC	3 cut(s)	793, 1952, 2841
Bso31I	GGTCTC	3 cut(s)	775, 1719, 2829
BsoBI	CYCGRG	2 cut(s)	250, 376
Bsp119I	TTCGAA	1 cut(s)	469
Bsp1286I	GDGCHC	1 cut(s)	396
Bsp13I	TCCGGA	1 cut(s)	75
Bsp1407I	TGTACA	2 cut(s)	742, 2750
BspACI	CCGC	2 cut(s)	92, 2820
BspCNI	CTCAG	9 cut(s)	36, 115, 294, 382, 518, 1500, 1612, 2539, 2733
BspDI	ATCGAT	1 cut(s)	2058
BspEI	TCCGGA	1 cut(s)	75
BspHI	TCATGA	2 cut(s)	1167, 1276
BspLI	GGNNCC	4 cut(s)	168, 560, 1253, 2145
BspMAI	CTGCAG	2 cut(s)	1959, 2211
BspMI	ACCTGC	2 cut(s)	2200, 2214
BspOI	GCTAGC	1 cut(s)	1743
BspPI	GGATC	4 cut(s)	974, 980, 2260, 2450
BspT104I	TTCGAA	1 cut(s)	469
BspT107I	GGYRCC	4 cut(s)	166, 558, 1251, 2143
BspTNI	GGTCTC	3 cut(s)	775, 1719, 2829
BsrDI	GCAATG	2 cut(s)	1407, 2779
BsrFI	RCCGGY	2 cut(s)	25, 82
BsrGI	TGTACA	2 cut(s)	742, 2750
BsrI	ACTGG	7 cut(s)	233, 758, 1084, 1116, 1646, 2443, 2796
BssAI	RCCGGY	2 cut(s)	25, 82
BssECI	CCNNGG	5 cut(s)	156, 249, 1366, 1439, 2991
BssNI	GRCGYC	2 cut(s)	14, 2543
BssT1I	CCWWGG	2 cut(s)	156, 1366
Bst2UI	CCWGG	2 cut(s)	120, 1440
Bst4CI	ACNGT	7 cut(s)	949, 1655, 2370, 2394, 2473, 2758, 3006
Bst6I	CTCTTC	2 cut(s)	306, 1239
BstACI	GRCGYC	2 cut(s)	14, 2543
BstAUI	TGTACA	2 cut(s)	742, 2750
BstBI	TTCGAA	1 cut(s)	469
BstC8I	GCNNGC	8 cut(s)	538, 557, 908, 1361, 1741, 2102, 2274, 3015
BstEII	GGTNACC	1 cut(s)	2003
BstENI	CCTNNNNNAGG	1 cut(s)	1394
BstF5I	GGATG	8 cut(s)	580, 835, 910, 1099, 1386, 1561, 1578, 2986
BstH2I	RGCGCY	2 cut(s)	8, 98
BstHHI	GCGC	3 cut(s)	7, 97, 331
BstMAI	GTCTC	7 cut(s)	140, 503, 775, 1079, 1719, 2829, 2907
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 92, 565, 1369, 1469, 2044, 2486, 2498
BstNI	CCWGG	2 cut(s)	120, 1440
BstNSI	RCATGY	6 cut(s)	669, 1874, 2104, 2276, 2940, 2986
BstPAI	GACNNNNGTC	1 cut(s)	2335
BstPI	GGTNACC	1 cut(s)	2003
BstSCI	CCNGG	2 cut(s)	118, 1438
BstSFI	CTRYAG	6 cut(s)	948, 1673, 1708, 1955, 2207, 2379
BstV1I	GCAGC	8 cut(s)	1397, 1447, 1459, 1462, 1715, 2022, 2476, 2929
BstV2I	GAAGAC	2 cut(s)	2672, 2872
BstX2I	RGATCY	3 cut(s)	979, 2299, 2455
BstXI	CCANNNNNNTGG	1 cut(s)	163
BstYI	RGATCY	3 cut(s)	979, 2299, 2455
Bsu15I	ATCGAT	1 cut(s)	2058
BsuTUI	ATCGAT	1 cut(s)	2058
BtgZI	GCGATG	1 cut(s)	688
BtsCI	GGATG	8 cut(s)	580, 835, 910, 1099, 1386, 1561, 1578, 2986
BtsI	GCAGTG	1 cut(s)	2410
BveI	ACCTGC	2 cut(s)	2200, 2214
Cac8I	GCNNGC	8 cut(s)	538, 557, 908, 1361, 1741, 2102, 2274, 3015
CaiI	CAGNNNCTG	4 cut(s)	983, 1015, 1427, 2740
CciI	TCATGA	2 cut(s)	1167, 1276
CfoI	GCGC	3 cut(s)	7, 97, 331
Cfr10I	RCCGGY	2 cut(s)	25, 82
Cfr13I	GGNCC	4 cut(s)	751, 1370, 2680, 2995
ClaI	ATCGAT	1 cut(s)	2058
CseI	GACGC	3 cut(s)	3, 485, 740
Csp6I	GTAC	6 cut(s)	743, 870, 1063, 1252, 2387, 2751
CviQI	GTAC	6 cut(s)	743, 870, 1063, 1252, 2387, 2751
DraI	TTTAAA	1 cut(s)	1516
EaeI	YGGCCR	1 cut(s)	27
Eam1104I	CTCTTC	2 cut(s)	306, 1239
EarI	CTCTTC	2 cut(s)	306, 1239
Ecl136II	GAGCTC	1 cut(s)	394
Eco130I	CCWWGG	2 cut(s)	156, 1366
Eco147I	AGGCCT	1 cut(s)	118
Eco24I	GRGCYC	1 cut(s)	396
Eco31I	GGTCTC	3 cut(s)	775, 1719, 2829
Eco32I	GATATC	2 cut(s)	531, 1854
Eco47I	GGWCC	1 cut(s)	751
Eco53kI	GAGCTC	1 cut(s)	394
Eco57I	CTGAAG	7 cut(s)	180, 884, 1344, 1404, 1899, 2637, 2898
Eco88I	CYCGRG	2 cut(s)	250, 376
Eco91I	GGTNACC	1 cut(s)	2003
EcoICRI	GAGCTC	1 cut(s)	394
EcoNI	CCTNNNNNAGG	1 cut(s)	1394
EcoO109I	RGGNCCY	1 cut(s)	1370
EcoO65I	GGTNACC	1 cut(s)	2003
EcoRI	GAATTC	1 cut(s)	1757
EcoRII	CCWGG	2 cut(s)	118, 1438
EcoRV	GATATC	2 cut(s)	531, 1854
EcoT14I	CCWWGG	2 cut(s)	156, 1366
EcoT22I	ATGCAT	4 cut(s)	2274, 2278, 2435, 2988
EcoT38I	GRGCYC	1 cut(s)	396
ErhI	CCWWGG	2 cut(s)	156, 1366
Esp3I	CGTCTC	1 cut(s)	503
FalI	AAGNNNNNCTT	2 cut(s)	2106, 2138
FaqI	GGGAC	2 cut(s)	2343, 2570
FauI	CCCGC	1 cut(s)	2813
FauNDI	CATATG	4 cut(s)	1480, 2624, 2671, 2898
FbaI	TGATCA	4 cut(s)	1558, 2200, 2397, 2731
Fnu4HI	GCNGC	9 cut(s)	93, 1411, 1461, 1473, 1476, 1704, 2036, 2490, 2943
FokI	GGATG	8 cut(s)	587, 822, 897, 1106, 1373, 1548, 1565, 2973
FriOI	GRGCYC	1 cut(s)	396
Fsp4HI	GCNGC	9 cut(s)	93, 1411, 1461, 1473, 1476, 1704, 2036, 2490, 2943
FspBI	CTAG	6 cut(s)	1367, 1740, 2090, 2156, 2297, 2531
GlaI	GCGC	3 cut(s)	6, 96, 330
GluI	GCNGC	9 cut(s)	93, 1411, 1461, 1473, 1476, 1704, 2036, 2490, 2943
GsuI	CTGGAG	6 cut(s)	250, 1133, 1422, 2460, 2800, 2927
HaeII	RGCGCY	2 cut(s)	8, 98
HapII	CCGG	4 cut(s)	26, 76, 83, 1585
HgaI	GACGC	3 cut(s)	3, 485, 740
HhaI	GCGC	3 cut(s)	7, 97, 331
Hin1I	GRCGYC	2 cut(s)	14, 2543
Hin6I	GCGC	3 cut(s)	5, 95, 329
HinP1I	GCGC	3 cut(s)	5, 95, 329
HincII	GTYRAC	3 cut(s)	2179, 2340, 2620
HindII	GTYRAC	3 cut(s)	2179, 2340, 2620
HindIII	AAGCTT	3 cut(s)	416, 1326, 1901
HpaII	CCGG	4 cut(s)	26, 76, 83, 1585
HphI	GGTGA	6 cut(s)	74, 1099, 1955, 2004, 2195, 2813
HpyCH4III	ACNGT	7 cut(s)	949, 1655, 2370, 2394, 2473, 2758, 3006
HpyCH4IV	ACGT	2 cut(s)	584, 2543
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 92, 565, 1369, 1469, 2044, 2486, 2498
HpySE526I	ACGT	2 cut(s)	584, 2543
Hsp92I	GRCGYC	2 cut(s)	14, 2543
HspAI	GCGC	3 cut(s)	5, 95, 329
Kpn2I	TCCGGA	1 cut(s)	75
KpnI	GGTACC	1 cut(s)	1255
Ksp22I	TGATCA	4 cut(s)	1558, 2200, 2397, 2731
LmnI	GCTCC	6 cut(s)	637, 1114, 1368, 2441, 2571, 2819
Lsp1109I	GCAGC	8 cut(s)	1397, 1447, 1459, 1462, 1715, 2022, 2476, 2929
LweI	GCATC	7 cut(s)	919, 1161, 1447, 1726, 2285, 2489, 2995
MaeI	CTAG	6 cut(s)	1367, 1740, 2090, 2156, 2297, 2531
MaeII	ACGT	2 cut(s)	584, 2543
MfeI	CAATTG	1 cut(s)	2589
MflI	RGATCY	3 cut(s)	979, 2299, 2455
MhlI	GDGCHC	1 cut(s)	396
MlyI	GAGTC	3 cut(s)	604, 1820, 2801
MmeI	TCCRAC	3 cut(s)	87, 778, 968
Mph1103I	ATGCAT	4 cut(s)	2274, 2278, 2435, 2988
MroI	TCCGGA	1 cut(s)	75
MroXI	GAANNNNTTC	4 cut(s)	1269, 1884, 1950, 2928
MslI	CAYNNNNRTG	3 cut(s)	177, 240, 648
MspA1I	CMGCKG	1 cut(s)	2820
MspI	CCGG	4 cut(s)	26, 76, 83, 1585
MspR9I	CCNGG	2 cut(s)	120, 1440
MunI	CAATTG	1 cut(s)	2589
Mva1269I	GAATGC	3 cut(s)	793, 1952, 2841
MvaI	CCWGG	2 cut(s)	120, 1440
MwoI	GCNNNNNNNGC	8 cut(s)	11, 92, 565, 1369, 1469, 2044, 2486, 2498
NdeI	CATATG	4 cut(s)	1480, 2624, 2671, 2898
NheI	GCTAGC	1 cut(s)	1739
NlaIV	GGNNCC	4 cut(s)	168, 560, 1253, 2145
NmeAIII	GCCGAG	1 cut(s)	2972
NmuCI	GTSAC	4 cut(s)	728, 1423, 1873, 2218
NsiI	ATGCAT	4 cut(s)	2274, 2278, 2435, 2988
NspI	RCATGY	6 cut(s)	669, 1874, 2104, 2276, 2940, 2986
NspV	TTCGAA	1 cut(s)	469
OliI	CACNNNNGTG	1 cut(s)	240
PaeI	GCATGC	2 cut(s)	2104, 2276
PagI	TCATGA	2 cut(s)	1167, 1276
PaqCI	CACCTGC	1 cut(s)	2214
PceI	AGGCCT	1 cut(s)	118
PciI	ACATGT	3 cut(s)	665, 1870, 2936
PctI	GAATGC	3 cut(s)	793, 1952, 2841
PdmI	GAANNNNTTC	4 cut(s)	1269, 1884, 1950, 2928
PkrI	GCNGC	9 cut(s)	94, 1412, 1462, 1474, 1477, 1705, 2037, 2491, 2944
PleI	GAGTC	3 cut(s)	604, 1820, 2800
PpsI	GAGTC	3 cut(s)	604, 1820, 2800
PscI	ACATGT	3 cut(s)	665, 1870, 2936
PshAI	GACNNNNGTC	1 cut(s)	2335
PshBI	ATTAAT	3 cut(s)	219, 707, 2420
Psp124BI	GAGCTC	1 cut(s)	396
Psp1406I	AACGTT	1 cut(s)	584
Psp6I	CCWGG	2 cut(s)	118, 1438
PspEI	GGTNACC	1 cut(s)	2003
PspGI	CCWGG	2 cut(s)	118, 1438
PspN4I	GGNNCC	4 cut(s)	168, 560, 1253, 2145
PspPI	GGNCC	4 cut(s)	751, 1370, 2680, 2995
PstI	CTGCAG	2 cut(s)	1959, 2211
PstNI	CAGNNNCTG	4 cut(s)	983, 1015, 1427, 2740
PsuI	RGATCY	3 cut(s)	979, 2299, 2455
RsaI	GTAC	6 cut(s)	744, 871, 1064, 1253, 2388, 2752
RsaNI	GTAC	6 cut(s)	743, 870, 1063, 1252, 2387, 2751
RseI	CAYNNNNRTG	3 cut(s)	177, 240, 648
SacI	GAGCTC	1 cut(s)	396
SatI	GCNGC	9 cut(s)	93, 1411, 1461, 1473, 1476, 1704, 2036, 2490, 2943
Sau96I	GGNCC	4 cut(s)	751, 1370, 2680, 2995
SbfI	CCTGCAGG	1 cut(s)	2211
SchI	GAGTC	3 cut(s)	604, 1820, 2801
ScrFI	CCNGG	2 cut(s)	120, 1440
SdaI	CCTGCAGG	1 cut(s)	2211
SduI	GDGCHC	1 cut(s)	396
SfaNI	GCATC	7 cut(s)	919, 1161, 1447, 1726, 2285, 2489, 2995
SfcI	CTRYAG	6 cut(s)	948, 1673, 1708, 1955, 2207, 2379
SfuI	TTCGAA	1 cut(s)	469
SinI	GGWCC	1 cut(s)	751
SmiMI	CAYNNNNRTG	3 cut(s)	177, 240, 648
SmlI	CTYRAG	2 cut(s)	2127, 2712
SmoI	CTYRAG	2 cut(s)	2127, 2712
SphI	GCATGC	2 cut(s)	2104, 2276
Sse8387I	CCTGCAGG	1 cut(s)	2211
SseBI	AGGCCT	1 cut(s)	118
SsiI	CCGC	2 cut(s)	92, 2820
SspI	AATATT	1 cut(s)	2508
SspMI	CTAG	6 cut(s)	1367, 1740, 2090, 2156, 2297, 2531
SstI	GAGCTC	1 cut(s)	396
StuI	AGGCCT	1 cut(s)	118
StyD4I	CCNGG	2 cut(s)	118, 1438
StyI	CCWWGG	2 cut(s)	156, 1366
TaaI	ACNGT	7 cut(s)	949, 1655, 2370, 2394, 2473, 2758, 3006
TaiI	ACGT	2 cut(s)	587, 2546
TaqI	TCGA	3 cut(s)	469, 1829, 2058
TaqII	GACCGA	1 cut(s)	2466
TatI	WGTACW	4 cut(s)	742, 869, 1062, 2750
TauI	GCSGC	1 cut(s)	95
TseFI	GTSAC	4 cut(s)	728, 1423, 1873, 2218
TseI	GCWGC	8 cut(s)	1410, 1460, 1472, 1475, 1703, 2035, 2489, 2942
Tsp45I	GTSAC	4 cut(s)	728, 1423, 1873, 2218
TspGWI	ACGGA	2 cut(s)	587, 1878
VpaK11BI	GGWCC	1 cut(s)	751
VspI	ATTAAT	3 cut(s)	219, 707, 2420
XagI	CCTNNNNNAGG	1 cut(s)	1394
XapI	RAATTY	5 cut(s)	450, 842, 1757, 1846, 2258
XbaI	TCTAGA	1 cut(s)	2089
XceI	RCATGY	6 cut(s)	669, 1874, 2104, 2276, 2940, 2986
XmaJI	CCTAGG	1 cut(s)	1366
XmnI	GAANNNNTTC	4 cut(s)	1269, 1884, 1950, 2928
XspI	CTAG	6 cut(s)	1367, 1740, 2090, 2156, 2297, 2531
ZraI	GACGTC	1 cut(s)	2544
Zsp2I	ATGCAT	4 cut(s)	2274, 2278, 2435, 2988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.