Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006822.1

Orthogroup ID

OG0003769

Physical Location & Seq

Genomic Coordinates Reverse (-)

48504 .. 68795

Gene Structure 20292 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006822.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3465 bp

atggcgctatcggcgtctgacctaccggccatgttctcgttgctgagtaactcattgagtggtgatgagagtgtccggaaaccggcagaggcggcgctctctcagtcggaggcgaggcctggtttctgctcttgtctcatggaagtcataacagccaaggatttggcacctcatgtagatgttcgcttgatggcttcagtgtatttcaaaaatagtattaatcgttactggaggcacaggcgtgattcctcgggaattagcaacgaggagaagctatatctcagacaaaaactcttatcacacttcggggaagagagcaatcagatagcgcaaatgttggctgtgcttgtttccaaaattgctcgtatagattacccgagagaatggcctgagctcttttctgttttagcacagaagcttcaatcagcagatattctttcttcgcacagaatttttttgaccctctttcgaaccttgaaggagttgtccaccaagcgtctcatctcagaccaaaagaactttgcagagatatcagctcgcttctttgattatagctggcacctttggcagacggatgtgcaaacgttgttacatggtttttctacattgactcaaagctacaactcaaatacattggagcaacatcacgatgatctttatctaacatgtgagcgatggctgttgtgcctaaagataatacgccaattaatagtttcaggttttccaagtgacgcaaaatgcgtacaggaggtccgaccagtcatggaggtctcgcccatgctcttgaatgccattcagtcatttctcccatactattcatcttttcagaaaggacatcctaaatttttggacttcctaaagagggcttgtactaaactgatgaaggttttaattgcacttcagggcaggcatccttattcttttagtgataaatgtgtccttccgactgtagttgatttctgtttacagaagataacagatcctgatccagatgtattatcctttgagcagtttctgattcaatgtatggtaatgattaaatctatattagaatgtaaagagtacaagccaagtctcactggtcgggtgatggatgaaaatggcgttacactggagcaaatgaagaaaaatatatctggtgctgtcagtggcatcttgacttccctcatgacaagtgaacggattatagtcttgtgtaatacactgataagaaggtctctgtgttcgcatattgaagatgctagcttttcagaaggagaattcgttgatcttctacctatatgttgggattcaagttttaggttgattgaggaagttcaggagtttgactcgaagggcaggcatccttattcttttagtgataaatgtgtccttccgactgtagttgatttctgtttacagaagataacagatcctgatccagatgtattatcctttgagcagtttctgattcaatgtatggtaatgattaaatctatattagaatgtaaagagtacaagccaagtctcactggtcgggtgatggatgaaaatggcgttacactggagcaaatgaagaaaaatatatctggtgctgtcagtggcatcttgacttccctcatgacaagtgaacggattatagtcttgtgtaatacactgataagaaggtattttgttctaacaacaagtgatttggaagagtggtaccagaatcctgaatcttttcatcatgagcaggatatggttcagtggacagaaaaattaaggccatgtgctgaagctttatacattgttctttttgaaaaccacagccagctcctagggcctgttgtggtttccatccttcaagaggcaatgaatggctgcccatcttcagtgactgaaatcactccagggttgcttcttaaagatgctgcttatggtgctgctgcatatgtttattacgaactctcaaattacctgagctttaaagattggtttaatggtgcattatcccttgaactctcaaatgatcatccaaatatgcgtatcatccaccggaaagttgcactaattttgggtcaatgggtttctgagattaaagaggacacaaagaggccagtttactgtgctttaatccgattactacaggacaaagacctatctgttaggttggcagcctgtaggtctctgtgttcgcatattgaagatgctagcttttcagaaggagaattcgttgatcttctccctatatgttgggattcaagttttaggttgattgaggaagttcaggagtttgactcgaaggttcaggttttgaatttgatatctgttctcattggacatgtgactgaagttattccgttcgcaaacaagcttgttctattttttcagaaggtttgggaggaatcttctggtgaatgccttctgcagattcaacttctcgttgcattgaagaactttgtggtcgcacttggttaccaatcacctctttgctacaacatattgctgcccgttctgcaaaagggaatcgatataaatagccctgatgaactcaatcttctagaggatagcatgctgttatgggaagccacactttctcaagccccttcaatggtgcctcaactactagcatacttcccttgtttagttgacattctggaaagaagttttgatcacctgcaggttgctgtcactataattgaagattacattatcttaggtggatcggaatttttgagtatgcatgcatcaagtgtggctaaaatactagatctggttgttgggaatgtcaatgataggggacttctgtcaactctccctgtcattgatattctaatacagtgtttccctacagaagtaccacagttgatcagcagtgcattacaaaaattaattgttatatgcataactggagctgatgaccgagatccttctaaggccactgttaaagcatcttcggctgccatcttggcaagaatattggttatgaataccaattacctagcacacttgacgtctgagccatcacttttgttgctccttcaaaagtcgggtgtcccaattgaagaaaatatacttctttctctcgttgacatatggcttgacaaggtagataatgtatcttcagtccaaaggaagacatatggcttggccctttctattattctaacattaagacttcctcaagtcctcgttaaacttgatcagattctgagtgtgtgtacaactgtaattttgggtggcaatgatgacttagtagaggagtccagtggtgatagtataagctccagcgggtctctttgtaaggacagcattccgagtaaagaattgcgaagaagacaggtcaagttttcagaccctataaaccatatgtctctggaggcttcagtaagggaaaaccttcaaacatgtgctgcccttcatggagaatcttttagtaaggccattggtaacatgcatccctcggcccttacacagttgaagcaggcattaaagatggcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001650 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005829 GO:0006810 GO:0008104 GO:0008150 GO:0008565 GO:0012505 GO:0015031 GO:0015833 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0045184 GO:0051179 GO:0051234 GO:0070013 GO:0071702 GO:0071705

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N Xpo1

Protein Analysis

1154

Amino Acids

129.75

Weight (kDa)

5.36

Isoelectric Point (pI)

48.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08960 AT3G08960 AT3G08960
fragaria_vesca	FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010
malus_domestica	MD04G1000200.v1.1 MD04G1000400.v1.1
prunus_persica	Prupe.1G000100_v2.0.a1 Prupe.1G000100_v2.0.a1 Prupe.1G000300_v2.0.a1 Prupe.1G000300_v2.0.a1
pyrus_communis	pycom04g00040 pycom04g00060 pycom04g00090
rosa_laevigata	RLG00000010280
rosa_multiflora	Rmu_sc0006822.1_g000022 Rmu_sc0020186.1_g000001
rosa_roxburghii	Rroxscaffold_5G00332670
rosa_rugosa	Rorug03G0296500
rosa_samantha	Rh4AG000300 Rh4BG000300 Rh4CG000100 Rh4DG000500
rosa_wichuraiana	Rw4G000860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2646
AatII	GACGTC	1 cut(s)	2978
Acc36I	ACCTGC	2 cut(s)	2632, 2646
Acc65I	GGTACC	1 cut(s)	1683
AccB1I	GGYRCC	4 cut(s)	166, 558, 1683, 2575
AccIII	TCCGGA	1 cut(s)	75
AciI	CCGC	2 cut(s)	92, 3252
AclI	AACGTT	1 cut(s)	584
AclWI	GGATC	6 cut(s)	974, 980, 1406, 1412, 2692, 2882
AcoI	YGGCCR	1 cut(s)	27
AcsI	RAATTY	6 cut(s)	450, 842, 1259, 2189, 2278, 2690
AcuI	CTGAAG	7 cut(s)	180, 884, 1776, 1836, 2331, 3069, 3330
AcyI	GRCGYC	2 cut(s)	14, 2975
AfaI	GTAC	7 cut(s)	744, 871, 1064, 1496, 1685, 2820, 3184
AfiI	CCNNNNNNNGG	4 cut(s)	82, 862, 1828, 2572
AflIII	ACRYGT	3 cut(s)	665, 2302, 3368
AjnI	CCWGG	2 cut(s)	118, 1870
AleI	CACNNNNGTG	1 cut(s)	240
Alw21I	GWGCWC	1 cut(s)	396
Alw26I	GTCTC	9 cut(s)	140, 503, 775, 1079, 1221, 1511, 2151, 3261, 3339
AlwI	GGATC	6 cut(s)	974, 980, 1406, 1412, 2692, 2882
AlwNI	CAGNNNCTG	6 cut(s)	983, 1015, 1415, 1447, 1859, 3172
Ama87I	CYCGRG	2 cut(s)	250, 376
Aor13HI	TCCGGA	1 cut(s)	75
ApeKI	GCWGC	8 cut(s)	1842, 1892, 1904, 1907, 2135, 2467, 2921, 3374
ApoI	RAATTY	6 cut(s)	450, 842, 1259, 2189, 2278, 2690
AseI	ATTAAT	3 cut(s)	219, 707, 2852
Asp700I	GAANNNNTTC	4 cut(s)	1701, 2316, 2382, 3360
Asp718I	GGTACC	1 cut(s)	1683
AspA2I	CCTAGG	1 cut(s)	1798
AspLEI	GCGC	3 cut(s)	7, 97, 331
AspS9I	GGNCC	4 cut(s)	751, 1802, 3112, 3427
AsuHPI	GGTGA	7 cut(s)	74, 1099, 1531, 2387, 2436, 2627, 3245
AsuII	TTCGAA	1 cut(s)	469
AsuNHI	GCTAGC	2 cut(s)	1241, 2171
AvaI	CYCGRG	2 cut(s)	250, 376
AvaII	GGWCC	1 cut(s)	751
AvrII	CCTAGG	1 cut(s)	1798
BaeI	ACNNNNGTAYC	2 cut(s)	2802, 2835
BanI	GGYRCC	4 cut(s)	166, 558, 1683, 2575
BanII	GRGCYC	1 cut(s)	396
BarI	GAAGNNNNNNTAC	2 cut(s)	3018, 3050
BbsI	GAAGAC	2 cut(s)	3104, 3304
Bbv12I	GWGCWC	1 cut(s)	396
BbvI	GCAGC	8 cut(s)	1829, 1879, 1891, 1894, 2147, 2454, 2908, 3361
BccI	CCATC	9 cut(s)	184, 669, 1084, 1516, 1826, 1855, 2933, 2992, 3451
BciT130I	CCWGG	2 cut(s)	120, 1872
BclI	TGATCA	4 cut(s)	1990, 2632, 2829, 3163
BcoDI	GTCTC	9 cut(s)	140, 503, 775, 1079, 1221, 1511, 2151, 3261, 3339
BfaI	CTAG	7 cut(s)	1242, 1799, 2172, 2522, 2588, 2729, 2963
BfmI	CTRYAG	7 cut(s)	948, 1380, 2105, 2140, 2387, 2639, 2811
BfoI	RGCGCY	2 cut(s)	8, 98
BfuAI	ACCTGC	2 cut(s)	2632, 2646
BglI	GCCNNNNNGGC	1 cut(s)	2930
BglII	AGATCT	1 cut(s)	2731
BisI	GCNGC	9 cut(s)	93, 1843, 1893, 1905, 1908, 2136, 2468, 2922, 3375
BlnI	CCTAGG	1 cut(s)	1798
BlsI	GCNGC	9 cut(s)	94, 1844, 1894, 1906, 1909, 2137, 2469, 2923, 3376
Bme1390I	CCNGG	2 cut(s)	120, 1872
Bme18I	GGWCC	1 cut(s)	751
BmeT110I	CYCGRG	2 cut(s)	250, 376
BmgT120I	GGNCC	4 cut(s)	751, 1802, 3112, 3427
BmiI	GGNNCC	4 cut(s)	168, 560, 1685, 2577
BmrFI	CCNGG	2 cut(s)	120, 1872
BmtI	GCTAGC	2 cut(s)	1245, 2175
BoxI	GACNNNNGTC	1 cut(s)	2767
BpiI	GAAGAC	2 cut(s)	3104, 3304
BplI	GAGNNNNNCTC	4 cut(s)	1313, 1345, 2243, 2275
BpmI	CTGGAG	7 cut(s)	250, 1133, 1565, 1854, 2892, 3232, 3359
Bpu10I	CCTNAGC	2 cut(s)	390, 1940
Bpu14I	TTCGAA	1 cut(s)	469
BpuEI	CTTGAG	2 cut(s)	2544, 3129
Bsa29I	ATCGAT	1 cut(s)	2490
BsaBI	GATNNNNATC	3 cut(s)	657, 984, 1416
BsaHI	GRCGYC	2 cut(s)	14, 2975
BsaI	GGTCTC	4 cut(s)	775, 1221, 2151, 3261
BsaJI	CCNNGG	5 cut(s)	156, 249, 1798, 1871, 3423
BsaWI	WCCGGW	2 cut(s)	75, 2016
BsaXI	ACNNNNNCTCC	4 cut(s)	1248, 1278, 2178, 2208
Bsc4I	CCNNNNNNNGG	4 cut(s)	82, 862, 1828, 2572
Bse118I	RCCGGY	2 cut(s)	25, 82
Bse1I	ACTGG	9 cut(s)	233, 758, 1084, 1116, 1516, 1548, 2078, 2875, 3228
Bse3DI	GCAATG	2 cut(s)	1839, 3211
Bse8I	GATNNNNATC	3 cut(s)	657, 984, 1416
BseAI	TCCGGA	1 cut(s)	75
BseBI	CCWGG	2 cut(s)	120, 1872
BseCI	ATCGAT	1 cut(s)	2490
BseDI	CCNNGG	5 cut(s)	156, 249, 1798, 1871, 3423
BseJI	GATNNNNATC	3 cut(s)	657, 984, 1416
BseLI	CCNNNNNNNGG	4 cut(s)	82, 862, 1828, 2572
BseMI	GCAATG	2 cut(s)	1839, 3211
BseMII	CTCAG	9 cut(s)	35, 116, 295, 381, 519, 1931, 2043, 2970, 3164
BseNI	ACTGG	9 cut(s)	233, 758, 1084, 1116, 1516, 1548, 2078, 2875, 3228
BseRI	GAGGAG	2 cut(s)	281, 3236
BseXI	GCAGC	8 cut(s)	1829, 1879, 1891, 1894, 2147, 2454, 2908, 3361
BshNI	GGYRCC	4 cut(s)	166, 558, 1683, 2575
BshVI	ATCGAT	1 cut(s)	2490
BsiHKAI	GWGCWC	1 cut(s)	396
BsiHKCI	CYCGRG	2 cut(s)	250, 376
BsiSI	CCGG	4 cut(s)	26, 76, 83, 2017
BslFI	GGGAC	2 cut(s)	2775, 3002
BslI	CCNNNNNNNGG	4 cut(s)	82, 862, 1828, 2572
BsmAI	GTCTC	9 cut(s)	140, 503, 775, 1079, 1221, 1511, 2151, 3261, 3339
BsmBI	CGTCTC	1 cut(s)	503
BsmFI	GGGAC	2 cut(s)	2775, 3002
BsmI	GAATGC	3 cut(s)	793, 2384, 3273
Bso31I	GGTCTC	4 cut(s)	775, 1221, 2151, 3261
BsoBI	CYCGRG	2 cut(s)	250, 376
Bsp119I	TTCGAA	1 cut(s)	469
Bsp1286I	GDGCHC	1 cut(s)	396
Bsp13I	TCCGGA	1 cut(s)	75
Bsp1407I	TGTACA	1 cut(s)	3182
BspACI	CCGC	2 cut(s)	92, 3252
BspCNI	CTCAG	9 cut(s)	36, 115, 294, 382, 518, 1932, 2044, 2971, 3165
BspDI	ATCGAT	1 cut(s)	2490
BspEI	TCCGGA	1 cut(s)	75
BspHI	TCATGA	3 cut(s)	1167, 1599, 1708
BspLI	GGNNCC	4 cut(s)	168, 560, 1685, 2577
BspMAI	CTGCAG	2 cut(s)	2391, 2643
BspMI	ACCTGC	2 cut(s)	2632, 2646
BspOI	GCTAGC	2 cut(s)	1245, 2175
BspPI	GGATC	6 cut(s)	974, 980, 1406, 1412, 2692, 2882
BspT104I	TTCGAA	1 cut(s)	469
BspT107I	GGYRCC	4 cut(s)	166, 558, 1683, 2575
BspTNI	GGTCTC	4 cut(s)	775, 1221, 2151, 3261
BsrDI	GCAATG	2 cut(s)	1839, 3211
BsrFI	RCCGGY	2 cut(s)	25, 82
BsrGI	TGTACA	1 cut(s)	3182
BsrI	ACTGG	9 cut(s)	233, 758, 1084, 1116, 1516, 1548, 2078, 2875, 3228
BssAI	RCCGGY	2 cut(s)	25, 82
BssECI	CCNNGG	5 cut(s)	156, 249, 1798, 1871, 3423
BssNI	GRCGYC	2 cut(s)	14, 2975
BssT1I	CCWWGG	2 cut(s)	156, 1798
Bst2UI	CCWGG	2 cut(s)	120, 1872
Bst4CI	ACNGT	8 cut(s)	949, 1381, 2087, 2802, 2826, 2905, 3190, 3438
Bst6I	CTCTTC	2 cut(s)	306, 1671
BstACI	GRCGYC	2 cut(s)	14, 2975
BstAUI	TGTACA	1 cut(s)	3182
BstBI	TTCGAA	1 cut(s)	469
BstEII	GGTNACC	1 cut(s)	2435
BstENI	CCTNNNNNAGG	1 cut(s)	1826
BstH2I	RGCGCY	2 cut(s)	8, 98
BstHHI	GCGC	3 cut(s)	7, 97, 331
BstMAI	GTCTC	9 cut(s)	140, 503, 775, 1079, 1221, 1511, 2151, 3261, 3339
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 92, 565, 1801, 1901, 2476, 2918, 2930
BstNI	CCWGG	2 cut(s)	120, 1872
BstNSI	RCATGY	6 cut(s)	669, 2306, 2536, 2708, 3372, 3418
BstPAI	GACNNNNGTC	1 cut(s)	2767
BstPI	GGTNACC	1 cut(s)	2435
BstSCI	CCNGG	2 cut(s)	118, 1870
BstSFI	CTRYAG	7 cut(s)	948, 1380, 2105, 2140, 2387, 2639, 2811
BstV1I	GCAGC	8 cut(s)	1829, 1879, 1891, 1894, 2147, 2454, 2908, 3361
BstV2I	GAAGAC	2 cut(s)	3104, 3304
BstX2I	RGATCY	4 cut(s)	979, 1411, 2731, 2887
BstXI	CCANNNNNNTGG	1 cut(s)	163
BstYI	RGATCY	4 cut(s)	979, 1411, 2731, 2887
Bsu15I	ATCGAT	1 cut(s)	2490
BsuTUI	ATCGAT	1 cut(s)	2490
BtgZI	GCGATG	1 cut(s)	688
BtsI	GCAGTG	1 cut(s)	2842
BveI	ACCTGC	2 cut(s)	2632, 2646
CaiI	CAGNNNCTG	6 cut(s)	983, 1015, 1415, 1447, 1859, 3172
CciI	TCATGA	3 cut(s)	1167, 1599, 1708
CfoI	GCGC	3 cut(s)	7, 97, 331
Cfr10I	RCCGGY	2 cut(s)	25, 82
Cfr13I	GGNCC	4 cut(s)	751, 1802, 3112, 3427
ClaI	ATCGAT	1 cut(s)	2490
CseI	GACGC	3 cut(s)	3, 485, 740
Csp6I	GTAC	7 cut(s)	743, 870, 1063, 1495, 1684, 2819, 3183
CviQI	GTAC	7 cut(s)	743, 870, 1063, 1495, 1684, 2819, 3183
DraI	TTTAAA	1 cut(s)	1948
EaeI	YGGCCR	1 cut(s)	27
Eam1104I	CTCTTC	2 cut(s)	306, 1671
EarI	CTCTTC	2 cut(s)	306, 1671
Ecl136II	GAGCTC	1 cut(s)	394
Eco130I	CCWWGG	2 cut(s)	156, 1798
Eco147I	AGGCCT	1 cut(s)	118
Eco24I	GRGCYC	1 cut(s)	396
Eco31I	GGTCTC	4 cut(s)	775, 1221, 2151, 3261
Eco32I	GATATC	2 cut(s)	531, 2286
Eco47I	GGWCC	1 cut(s)	751
Eco53kI	GAGCTC	1 cut(s)	394
Eco57I	CTGAAG	7 cut(s)	180, 884, 1776, 1836, 2331, 3069, 3330
Eco88I	CYCGRG	2 cut(s)	250, 376
Eco91I	GGTNACC	1 cut(s)	2435
EcoICRI	GAGCTC	1 cut(s)	394
EcoNI	CCTNNNNNAGG	1 cut(s)	1826
EcoO109I	RGGNCCY	1 cut(s)	1802
EcoO65I	GGTNACC	1 cut(s)	2435
EcoRI	GAATTC	2 cut(s)	1259, 2189
EcoRII	CCWGG	2 cut(s)	118, 1870
EcoRV	GATATC	2 cut(s)	531, 2286
EcoT14I	CCWWGG	2 cut(s)	156, 1798
EcoT22I	ATGCAT	4 cut(s)	2706, 2710, 2867, 3420
EcoT38I	GRGCYC	1 cut(s)	396
ErhI	CCWWGG	2 cut(s)	156, 1798
Esp3I	CGTCTC	1 cut(s)	503
FalI	AAGNNNNNCTT	2 cut(s)	2538, 2570
FaqI	GGGAC	2 cut(s)	2775, 3002
FauI	CCCGC	1 cut(s)	3245
FauNDI	CATATG	4 cut(s)	1912, 3056, 3103, 3330
FbaI	TGATCA	4 cut(s)	1990, 2632, 2829, 3163
Fnu4HI	GCNGC	9 cut(s)	93, 1843, 1893, 1905, 1908, 2136, 2468, 2922, 3375
FriOI	GRGCYC	1 cut(s)	396
Fsp4HI	GCNGC	9 cut(s)	93, 1843, 1893, 1905, 1908, 2136, 2468, 2922, 3375
FspBI	CTAG	7 cut(s)	1242, 1799, 2172, 2522, 2588, 2729, 2963
GlaI	GCGC	3 cut(s)	6, 96, 330
GluI	GCNGC	9 cut(s)	93, 1843, 1893, 1905, 1908, 2136, 2468, 2922, 3375
GsuI	CTGGAG	7 cut(s)	250, 1133, 1565, 1854, 2892, 3232, 3359
HaeII	RGCGCY	2 cut(s)	8, 98
HapII	CCGG	4 cut(s)	26, 76, 83, 2017
HgaI	GACGC	3 cut(s)	3, 485, 740
HhaI	GCGC	3 cut(s)	7, 97, 331
Hin1I	GRCGYC	2 cut(s)	14, 2975
Hin6I	GCGC	3 cut(s)	5, 95, 329
HinP1I	GCGC	3 cut(s)	5, 95, 329
HincII	GTYRAC	3 cut(s)	2611, 2772, 3052
HindII	GTYRAC	3 cut(s)	2611, 2772, 3052
HindIII	AAGCTT	3 cut(s)	416, 1758, 2333
HpaII	CCGG	4 cut(s)	26, 76, 83, 2017
HphI	GGTGA	7 cut(s)	74, 1099, 1531, 2387, 2436, 2627, 3245
HpyCH4III	ACNGT	8 cut(s)	949, 1381, 2087, 2802, 2826, 2905, 3190, 3438
HpyCH4IV	ACGT	2 cut(s)	584, 2975
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 92, 565, 1801, 1901, 2476, 2918, 2930
HpySE526I	ACGT	2 cut(s)	584, 2975
Hsp92I	GRCGYC	2 cut(s)	14, 2975
HspAI	GCGC	3 cut(s)	5, 95, 329
Kpn2I	TCCGGA	1 cut(s)	75
KpnI	GGTACC	1 cut(s)	1687
Ksp22I	TGATCA	4 cut(s)	1990, 2632, 2829, 3163
LmnI	GCTCC	7 cut(s)	637, 1114, 1546, 1800, 2873, 3003, 3251
Lsp1109I	GCAGC	8 cut(s)	1829, 1879, 1891, 1894, 2147, 2454, 2908, 3361
MaeI	CTAG	7 cut(s)	1242, 1799, 2172, 2522, 2588, 2729, 2963
MaeII	ACGT	2 cut(s)	584, 2975
MfeI	CAATTG	1 cut(s)	3021
MflI	RGATCY	4 cut(s)	979, 1411, 2731, 2887
MhlI	GDGCHC	1 cut(s)	396
MlyI	GAGTC	4 cut(s)	604, 1322, 2252, 3233
MmeI	TCCRAC	4 cut(s)	87, 778, 968, 1400
Mph1103I	ATGCAT	4 cut(s)	2706, 2710, 2867, 3420
MroI	TCCGGA	1 cut(s)	75
MroXI	GAANNNNTTC	4 cut(s)	1701, 2316, 2382, 3360
MslI	CAYNNNNRTG	3 cut(s)	177, 240, 648
MspA1I	CMGCKG	1 cut(s)	3252
MspI	CCGG	4 cut(s)	26, 76, 83, 2017
MspR9I	CCNGG	2 cut(s)	120, 1872
MunI	CAATTG	1 cut(s)	3021
Mva1269I	GAATGC	3 cut(s)	793, 2384, 3273
MvaI	CCWGG	2 cut(s)	120, 1872
MwoI	GCNNNNNNNGC	8 cut(s)	11, 92, 565, 1801, 1901, 2476, 2918, 2930
NdeI	CATATG	4 cut(s)	1912, 3056, 3103, 3330
NheI	GCTAGC	2 cut(s)	1241, 2171
NlaIV	GGNNCC	4 cut(s)	168, 560, 1685, 2577
NmeAIII	GCCGAG	1 cut(s)	3404
NmuCI	GTSAC	4 cut(s)	728, 1855, 2305, 2650
NsiI	ATGCAT	4 cut(s)	2706, 2710, 2867, 3420
NspI	RCATGY	6 cut(s)	669, 2306, 2536, 2708, 3372, 3418
NspV	TTCGAA	1 cut(s)	469
OliI	CACNNNNGTG	1 cut(s)	240
PaeI	GCATGC	2 cut(s)	2536, 2708
PagI	TCATGA	3 cut(s)	1167, 1599, 1708
PaqCI	CACCTGC	1 cut(s)	2646
PceI	AGGCCT	1 cut(s)	118
PciI	ACATGT	3 cut(s)	665, 2302, 3368
PcsI	WCGNNNNNNNCGW	1 cut(s)	738
PctI	GAATGC	3 cut(s)	793, 2384, 3273
PdmI	GAANNNNTTC	4 cut(s)	1701, 2316, 2382, 3360
PkrI	GCNGC	9 cut(s)	94, 1844, 1894, 1906, 1909, 2137, 2469, 2923, 3376
PleI	GAGTC	4 cut(s)	604, 1322, 2252, 3232
PpsI	GAGTC	4 cut(s)	604, 1322, 2252, 3232
PscI	ACATGT	3 cut(s)	665, 2302, 3368
PshAI	GACNNNNGTC	1 cut(s)	2767
PshBI	ATTAAT	3 cut(s)	219, 707, 2852
Psp124BI	GAGCTC	1 cut(s)	396
Psp1406I	AACGTT	1 cut(s)	584
Psp6I	CCWGG	2 cut(s)	118, 1870
PspEI	GGTNACC	1 cut(s)	2435
PspGI	CCWGG	2 cut(s)	118, 1870
PspN4I	GGNNCC	4 cut(s)	168, 560, 1685, 2577
PspPI	GGNCC	4 cut(s)	751, 1802, 3112, 3427
PstI	CTGCAG	2 cut(s)	2391, 2643
PstNI	CAGNNNCTG	6 cut(s)	983, 1015, 1415, 1447, 1859, 3172
PsuI	RGATCY	4 cut(s)	979, 1411, 2731, 2887
RsaI	GTAC	7 cut(s)	744, 871, 1064, 1496, 1685, 2820, 3184
RsaNI	GTAC	7 cut(s)	743, 870, 1063, 1495, 1684, 2819, 3183
RseI	CAYNNNNRTG	3 cut(s)	177, 240, 648
SacI	GAGCTC	1 cut(s)	396
SatI	GCNGC	9 cut(s)	93, 1843, 1893, 1905, 1908, 2136, 2468, 2922, 3375
Sau96I	GGNCC	4 cut(s)	751, 1802, 3112, 3427
SbfI	CCTGCAGG	1 cut(s)	2643
SchI	GAGTC	4 cut(s)	604, 1322, 2252, 3233
ScrFI	CCNGG	2 cut(s)	120, 1872
SdaI	CCTGCAGG	1 cut(s)	2643
SduI	GDGCHC	1 cut(s)	396
SfcI	CTRYAG	7 cut(s)	948, 1380, 2105, 2140, 2387, 2639, 2811
SfuI	TTCGAA	1 cut(s)	469
SinI	GGWCC	1 cut(s)	751
SmiMI	CAYNNNNRTG	3 cut(s)	177, 240, 648
SmlI	CTYRAG	2 cut(s)	2559, 3144
SmoI	CTYRAG	2 cut(s)	2559, 3144
SphI	GCATGC	2 cut(s)	2536, 2708
Sse8387I	CCTGCAGG	1 cut(s)	2643
SseBI	AGGCCT	1 cut(s)	118
SsiI	CCGC	2 cut(s)	92, 3252
SspI	AATATT	1 cut(s)	2940
SspMI	CTAG	7 cut(s)	1242, 1799, 2172, 2522, 2588, 2729, 2963
SstI	GAGCTC	1 cut(s)	396
StuI	AGGCCT	1 cut(s)	118
StyD4I	CCNGG	2 cut(s)	118, 1870
StyI	CCWWGG	2 cut(s)	156, 1798
TaaI	ACNGT	8 cut(s)	949, 1381, 2087, 2802, 2826, 2905, 3190, 3438
TaiI	ACGT	2 cut(s)	587, 2978
TaqI	TCGA	4 cut(s)	469, 1331, 2261, 2490
TaqII	GACCGA	1 cut(s)	2898
TatI	WGTACW	4 cut(s)	869, 1062, 1494, 3182
TauI	GCSGC	1 cut(s)	95
TseFI	GTSAC	4 cut(s)	728, 1855, 2305, 2650
TseI	GCWGC	8 cut(s)	1842, 1892, 1904, 1907, 2135, 2467, 2921, 3374
Tsp45I	GTSAC	4 cut(s)	728, 1855, 2305, 2650
TspGWI	ACGGA	4 cut(s)	587, 1195, 1627, 2310
VpaK11BI	GGWCC	1 cut(s)	751
VspI	ATTAAT	3 cut(s)	219, 707, 2852
XagI	CCTNNNNNAGG	1 cut(s)	1826
XapI	RAATTY	6 cut(s)	450, 842, 1259, 2189, 2278, 2690
XbaI	TCTAGA	1 cut(s)	2521
XceI	RCATGY	6 cut(s)	669, 2306, 2536, 2708, 3372, 3418
XmaJI	CCTAGG	1 cut(s)	1798
XmnI	GAANNNNTTC	4 cut(s)	1701, 2316, 2382, 3360
XspI	CTAG	7 cut(s)	1242, 1799, 2172, 2522, 2588, 2729, 2963
ZraI	GACGTC	1 cut(s)	2976
Zsp2I	ATGCAT	4 cut(s)	2706, 2710, 2867, 3420

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.