Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0003769

Physical Location & Seq

Genomic Coordinates Forward (+)

14376 .. 22527

Gene Structure 8152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1000200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGGCGCTCTCGGCGTCTGACCTGCCAGCCATGTACTCGCTGCTGGCCAACTCTTTGAGTGGCGACGAAAATGTGCGGAAACCGGCGGAGTTAGCGCTCTCGCAGTCGGAGGCAAGGCCTGGTTTCTGCTCTTGTCTGATGGAAGTGATAACTGCCAAGGATTTGGTAGCTCATGTGGATGTTCGCTTGTTGGCTTCAGTGTATTTCAAGAACAGCGTTAATCGCTATTGGAGGCACCGGCGAGATTCGTCGGGAATCAGCAACGAGGAGAAAATGCATCTGAGACAAAAACTCTTATCACACTTTGGAGAAGAGAACGATCAGATAGCAAAAGTGTTGGCCGTGCTTGTTTCCAAAATTGCTCGTATTGATTACCCCAAAGAATGGCCACAGCTCTTATCTGTTTTAGCACAAAAGCTTCAATCAACAGATGTTCTTTCTTCCCACAGAATTTTTTTGACCCTCTTTCGAACTTTGAAGGAACTATCCTCTAAGCGTCTTATCTCAGACCAAAAGAACTTTGCAGAGATATCAGCTCAGTTCTTTGATTATAGCTGGCACCTTTGGCAGAGCGACATGCAAACAATTTTACATGGTTTTTGTACAATTTCTGAAAGCTATAACTCAAATGCATTGGAGCTACATCAGGATGAGCTTTATCTAACTTGTGAGCGATGGCTGCTGTGCTTAAGGATAATATGCCAGTTAATAGTTTCAGGGTTTCCAAGTGATGCAAAATGTCTGCAGGAGGTCCGGCCAGTGAAGGAGGTCTCGCCCCTGCTCTTGAATGCCATTCAGTCATTTCTCCCATATTATTCTTCCTTTCAGAAAGGACATCCTAAATTTTGGGACTTTATAAAGAGGGCATGTACTAAGTTGATGAAGGTTTTAATTGCAATTCAGGGCAGACATCCTTACTCATTTAGTGATAAATGTGTCCTTCCAACTGTAGTGGATTTCTGTTTAAAGAAGATAACAGATCCTGAACCAGATGTATTATTATTTGAGCAGTTTCTGATTCAGTGTATGATAATGATTAAGTGTGTCTTGGAATGTAAAGAGTACAAGCCAAGTGTCACTGGTCGGGTGATGGATGAAAATGGGGTTACACTGGAGCAAATGAAGAAAAACATATCCGGTGCAGTTGGTGGCGCCTTGACTTCCCTTATGACAAGCGAACGAATAGTATTCTTGTGCAACATATTAGTAAGAAGGTATTTTGTTCTTACATCAAGTGATTTGGAGGAGTGGTACCAAAGTCCTGAATCATTCCATCATGAGCAGGATATGGTTCAGTGGACAGAAAAATTAAGGCCATGCGCTGAAGCTTTATACATTGTTCTATTTGAAAATCACAGCCAGCTTCTAGCTCCTGTTGTGGTTTCCATCCTTAAAGAGGCAATGAATGGTTGCCCAACTTCAGTGACTGAAATAACTCCAGGGTTGCTTCTAAAAGATGCTGCTTACGGTGCTGCTGCATATGTTTATTACGAGCTCTCAAATTACCTGAGCTTTGATGATTGGTTTAATGGTGCCTTATCCCTTGAACTCTCAAATGATCATCCAAATATGCGTATCATCCATCGGAAAGTTGCACTAATATTGGGACAATGGGTTTCTGAGATTAAAGAGGACACAAAAAGGCCAGTTTACTGTGCTTTGATCAGATTGCTACAGGACAAGGACCTATCTGTAAGGATGGCAGCCTGTAGGTCTCTGTGTTTGCATATTGAAGATGCTAGCTTTTCAGAAAGAGAATTCATCGATCTTCTCCCTATCTGTTGGGATTCATGTTTTAAGTTGATTGAGGACGTTCAGGAGTTTGACTCAAAGCCACTGTGGGGTGAGCAGTGGCAGCTTACCCCACTGAAGATGTTGCTTTCATTTAGTGTTGCAGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001650 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005829 GO:0006810 GO:0008104 GO:0008150 GO:0008565 GO:0012505 GO:0015031 GO:0015833 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0045184 GO:0051179 GO:0051234 GO:0070013 GO:0071702 GO:0071705

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N Xpo1

Protein Analysis

634

Amino Acids

72.46

Weight (kDa)

5.94

Isoelectric Point (pI)

47.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	29 - 103	5.3e-15	Importin-beta N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08960 AT3G08960 AT3G08960
fragaria_vesca	FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010 FvH4_4g00010
malus_domestica	MD04G1000200.v1.1 MD04G1000400.v1.1
prunus_persica	Prupe.1G000100_v2.0.a1 Prupe.1G000100_v2.0.a1 Prupe.1G000300_v2.0.a1 Prupe.1G000300_v2.0.a1
pyrus_communis	pycom04g00040 pycom04g00060 pycom04g00090
rosa_laevigata	RLG00000010280
rosa_multiflora	Rmu_sc0006822.1_g000022 Rmu_sc0020186.1_g000001
rosa_roxburghii	Rroxscaffold_5G00332670
rosa_rugosa	Rorug03G0296500
rosa_samantha	Rh4AG000300 Rh4BG000300 Rh4CG000100 Rh4DG000500
rosa_wichuraiana	Rw4G000860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	857
Acc36I	ACCTGC	1 cut(s)	30
Acc65I	GGTACC	1 cut(s)	1251
AccB1I	GGYRCC	5 cut(s)	234, 558, 1151, 1251, 1532
AccB7I	CCANNNNNTGG	1 cut(s)	384
AciI	CCGC	2 cut(s)	76, 86
AclWI	GGATC	1 cut(s)	974
AcoI	YGGCCR	4 cut(s)	45, 339, 386, 755
AcsI	RAATTY	3 cut(s)	450, 842, 1757
AcuI	CTGAAG	4 cut(s)	180, 1344, 1404, 1889
AcyI	GRCGYC	2 cut(s)	14, 1152
AfaI	GTAC	5 cut(s)	35, 604, 871, 1064, 1253
AfeI	AGCGCT	1 cut(s)	96
AfiI	CCNNNNNNNGG	3 cut(s)	384, 1396, 1841
AflII	CTTAAG	1 cut(s)	688
AgsI	TTSAA	7 cut(s)	208, 422, 478, 787, 1349, 1547, 1733
AjnI	CCWGG	2 cut(s)	118, 1438
Alw21I	GWGCWC	1 cut(s)	1497
Alw26I	GTCTC	3 cut(s)	277, 775, 1719
AlwI	GGATC	1 cut(s)	974
AlwNI	CAGNNNCTG	3 cut(s)	983, 1015, 1427
Aor51HI	AGCGCT	1 cut(s)	96
AoxI	GGCC	7 cut(s)	45, 116, 339, 386, 755, 1313, 1643
ApeKI	GCWGC	7 cut(s)	40, 679, 1460, 1472, 1475, 1703, 1855
ApoI	RAATTY	3 cut(s)	450, 842, 1757
Asp718I	GGTACC	1 cut(s)	1251
AspLEI	GCGC	4 cut(s)	7, 97, 1154, 1322
AspS9I	GGNCC	2 cut(s)	751, 1684
AsuHPI	GGTGA	2 cut(s)	1099, 1856
AsuII	TTCGAA	1 cut(s)	469
AsuNHI	GCTAGC	1 cut(s)	1739
AvaII	GGWCC	2 cut(s)	751, 1684
BaeI	ACNNNNGTAYC	2 cut(s)	1243, 1276
BalI	TGGCCA	2 cut(s)	47, 388
BanI	GGYRCC	5 cut(s)	234, 558, 1151, 1251, 1532
BanII	GRGCYC	1 cut(s)	1497
Bbv12I	GWGCWC	1 cut(s)	1497
BbvI	GCAGC	7 cut(s)	27, 666, 1447, 1459, 1462, 1715, 1867
BccI	CCATC	7 cut(s)	133, 669, 1084, 1281, 1394, 1590, 1693
BceAI	ACGGC	1 cut(s)	326
BciT130I	CCWGG	2 cut(s)	120, 1440
BclI	TGATCA	2 cut(s)	1558, 1662
BcoDI	GTCTC	3 cut(s)	277, 775, 1719
BfaI	CTAG	2 cut(s)	1367, 1740
BfmI	CTRYAG	4 cut(s)	743, 948, 1673, 1708
BfoI	RGCGCY	3 cut(s)	8, 98, 1155
BfrI	CTTAAG	1 cut(s)	688
BfuAI	ACCTGC	1 cut(s)	30
BisI	GCNGC	7 cut(s)	41, 680, 1461, 1473, 1476, 1704, 1856
BlsI	GCNGC	7 cut(s)	42, 681, 1462, 1474, 1477, 1705, 1857
Bme1390I	CCNGG	2 cut(s)	120, 1440
Bme18I	GGWCC	2 cut(s)	751, 1684
BmgT120I	GGNCC	2 cut(s)	751, 1684
BmiI	GGNNCC	5 cut(s)	236, 560, 1153, 1253, 1534
BmrFI	CCNGG	2 cut(s)	120, 1440
BmsI	GCATC	4 cut(s)	286, 721, 1447, 1726
BmtI	GCTAGC	1 cut(s)	1743
BplI	GAGNNNNNCTC	2 cut(s)	1811, 1843
BpmI	CTGGAG	2 cut(s)	1133, 1422
Bpu10I	CCTNAGC	1 cut(s)	1508
Bpu14I	TTCGAA	1 cut(s)	469
Bsa29I	ATCGAT	1 cut(s)	1764
BsaHI	GRCGYC	2 cut(s)	14, 1152
BsaI	GGTCTC	2 cut(s)	775, 1719
BsaJI	CCNNGG	2 cut(s)	156, 1439
BsaWI	WCCGGW	1 cut(s)	1136
BsaXI	ACNNNNNCTCC	2 cut(s)	1235, 1265
Bsc4I	CCNNNNNNNGG	3 cut(s)	384, 1396, 1841
Bse118I	RCCGGY	2 cut(s)	82, 237
Bse1I	ACTGG	5 cut(s)	703, 758, 1084, 1116, 1646
Bse3DI	GCAATG	1 cut(s)	1407
BseBI	CCWGG	2 cut(s)	120, 1440
BseCI	ATCGAT	1 cut(s)	1764
BseDI	CCNNGG	2 cut(s)	156, 1439
BseGI	GGATG	9 cut(s)	184, 655, 835, 910, 1099, 1386, 1561, 1578, 1704
BseLI	CCNNNNNNNGG	3 cut(s)	384, 1396, 1841
BseMI	GCAATG	1 cut(s)	1407
BseMII	CTCAG	5 cut(s)	272, 519, 551, 1499, 1611
BseNI	ACTGG	5 cut(s)	703, 758, 1084, 1116, 1646
BseRI	GAGGAG	2 cut(s)	281, 1259
BseXI	GCAGC	7 cut(s)	27, 666, 1447, 1459, 1462, 1715, 1867
BsgI	GTGCAG	1 cut(s)	1161
BshFI	GGCC	7 cut(s)	47, 118, 341, 388, 757, 1315, 1645
BshNI	GGYRCC	5 cut(s)	234, 558, 1151, 1251, 1532
BshVI	ATCGAT	1 cut(s)	1764
BsiHKAI	GWGCWC	1 cut(s)	1497
BsiSI	CCGG	4 cut(s)	83, 238, 754, 1137
BslFI	GGGAC	2 cut(s)	863, 1620
BslI	CCNNNNNNNGG	3 cut(s)	384, 1396, 1841
BsmAI	GTCTC	3 cut(s)	277, 775, 1719
BsmFI	GGGAC	2 cut(s)	863, 1620
BsmI	GAATGC	1 cut(s)	793
BsnI	GGCC	7 cut(s)	47, 118, 341, 388, 757, 1315, 1645
Bso31I	GGTCTC	2 cut(s)	775, 1719
Bsp119I	TTCGAA	1 cut(s)	469
Bsp1286I	GDGCHC	1 cut(s)	1497
Bsp1407I	TGTACA	1 cut(s)	602
Bsp143I	GATC	5 cut(s)	319, 979, 1558, 1662, 1765
BspACI	CCGC	2 cut(s)	76, 86
BspANI	GGCC	7 cut(s)	47, 118, 341, 388, 757, 1315, 1645
BspCNI	CTCAG	5 cut(s)	273, 518, 550, 1500, 1612
BspDI	ATCGAT	1 cut(s)	1764
BspHI	TCATGA	1 cut(s)	1276
BspLI	GGNNCC	5 cut(s)	236, 560, 1153, 1253, 1534
BspMAI	CTGCAG	1 cut(s)	747
BspMI	ACCTGC	1 cut(s)	30
BspOI	GCTAGC	1 cut(s)	1743
BspPI	GGATC	1 cut(s)	974
BspT104I	TTCGAA	1 cut(s)	469
BspT107I	GGYRCC	5 cut(s)	234, 558, 1151, 1251, 1532
BspTI	CTTAAG	1 cut(s)	688
BspTNI	GGTCTC	2 cut(s)	775, 1719
BsrDI	GCAATG	1 cut(s)	1407
BsrFI	RCCGGY	2 cut(s)	82, 237
BsrGI	TGTACA	1 cut(s)	602
BsrI	ACTGG	5 cut(s)	703, 758, 1084, 1116, 1646
BssAI	RCCGGY	2 cut(s)	82, 237
BssECI	CCNNGG	2 cut(s)	156, 1439
BssMI	GATC	5 cut(s)	319, 979, 1558, 1662, 1765
BssNI	GRCGYC	2 cut(s)	14, 1152
BssT1I	CCWWGG	1 cut(s)	156
Bst2UI	CCWGG	2 cut(s)	120, 1440
Bst4CI	ACNGT	4 cut(s)	949, 1469, 1655, 1839
Bst6I	CTCTTC	1 cut(s)	306
BstACI	GRCGYC	2 cut(s)	14, 1152
BstAFI	CTTAAG	1 cut(s)	688
BstAUI	TGTACA	1 cut(s)	602
BstBI	TTCGAA	1 cut(s)	469
BstC8I	GCNNGC	5 cut(s)	27, 45, 557, 1361, 1741
BstDEI	CTNAG	7 cut(s)	281, 492, 505, 537, 873, 1508, 1620
BstENI	CCTNNNNNAGG	1 cut(s)	1394
BstF5I	GGATG	9 cut(s)	184, 655, 835, 910, 1099, 1386, 1561, 1578, 1704
BstH2I	RGCGCY	3 cut(s)	8, 98, 1155
BstHHI	GCGC	4 cut(s)	7, 97, 1154, 1322
BstKTI	GATC	5 cut(s)	322, 982, 1561, 1665, 1768
BstMAI	GTCTC	3 cut(s)	277, 775, 1719
BstMBI	GATC	5 cut(s)	319, 979, 1558, 1662, 1765
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 92, 222, 565, 679, 1469, 1855
BstNI	CCWGG	2 cut(s)	120, 1440
BstNSI	RCATGY	2 cut(s)	580, 870
BstSCI	CCNGG	2 cut(s)	118, 1438
BstSFI	CTRYAG	4 cut(s)	743, 948, 1673, 1708
BstV1I	GCAGC	7 cut(s)	27, 666, 1447, 1459, 1462, 1715, 1867
BstX2I	RGATCY	1 cut(s)	979
BstXI	CCANNNNNNTGG	1 cut(s)	163
BstYI	RGATCY	1 cut(s)	979
Bsu15I	ATCGAT	1 cut(s)	1764
BsuRI	GGCC	7 cut(s)	47, 118, 341, 388, 757, 1315, 1645
BsuTUI	ATCGAT	1 cut(s)	1764
BtgZI	GCGATG	1 cut(s)	688
BtsCI	GGATG	9 cut(s)	184, 655, 835, 910, 1099, 1386, 1561, 1578, 1704
BtsI	GCAGTG	1 cut(s)	1856
BveI	ACCTGC	1 cut(s)	30
Cac8I	GCNNGC	5 cut(s)	27, 45, 557, 1361, 1741
CaiI	CAGNNNCTG	3 cut(s)	983, 1015, 1427
CciI	TCATGA	1 cut(s)	1276
CfoI	GCGC	4 cut(s)	7, 97, 1154, 1322
Cfr10I	RCCGGY	2 cut(s)	82, 237
Cfr13I	GGNCC	2 cut(s)	751, 1684
ClaI	ATCGAT	1 cut(s)	1764
CseI	GACGC	2 cut(s)	3, 485
Csp6I	GTAC	5 cut(s)	34, 603, 870, 1063, 1252
CspCI	CAANNNNNGTGG	2 cut(s)	933, 968
CviAII	CATG	8 cut(s)	31, 173, 577, 593, 867, 1277, 1317, 1791
CviQI	GTAC	5 cut(s)	34, 603, 870, 1063, 1252
DdeI	CTNAG	7 cut(s)	281, 492, 505, 537, 873, 1508, 1620
DinI	GGCGCC	1 cut(s)	1153
DpnI	GATC	5 cut(s)	321, 981, 1560, 1664, 1767
DpnII	GATC	5 cut(s)	319, 979, 1558, 1662, 1765
DraI	TTTAAA	1 cut(s)	966
EaeI	YGGCCR	4 cut(s)	45, 339, 386, 755
Eam1104I	CTCTTC	1 cut(s)	306
EarI	CTCTTC	1 cut(s)	306
EciI	GGCGGA	1 cut(s)	101
Ecl136II	GAGCTC	1 cut(s)	1495
Eco130I	CCWWGG	1 cut(s)	156
Eco147I	AGGCCT	1 cut(s)	118
Eco24I	GRGCYC	1 cut(s)	1497
Eco31I	GGTCTC	2 cut(s)	775, 1719
Eco32I	GATATC	1 cut(s)	531
Eco47I	GGWCC	2 cut(s)	751, 1684
Eco47III	AGCGCT	1 cut(s)	96
Eco53kI	GAGCTC	1 cut(s)	1495
Eco57I	CTGAAG	4 cut(s)	180, 1344, 1404, 1889
EcoICRI	GAGCTC	1 cut(s)	1495
EcoNI	CCTNNNNNAGG	1 cut(s)	1394
EcoO109I	RGGNCCY	1 cut(s)	1684
EcoRI	GAATTC	1 cut(s)	1757
EcoRII	CCWGG	2 cut(s)	118, 1438
EcoRV	GATATC	1 cut(s)	531
EcoT14I	CCWWGG	1 cut(s)	156
EcoT22I	ATGCAT	2 cut(s)	279, 634
EcoT38I	GRGCYC	1 cut(s)	1497
EgeI	GGCGCC	1 cut(s)	1153
EheI	GGCGCC	1 cut(s)	1153
ErhI	CCWWGG	1 cut(s)	156
FaeI	CATG	8 cut(s)	34, 176, 580, 596, 870, 1280, 1320, 1794
FalI	AAGNNNNNCTT	2 cut(s)	1031, 1063
FaqI	GGGAC	2 cut(s)	863, 1620
FatI	CATG	8 cut(s)	30, 172, 576, 592, 866, 1276, 1316, 1790
FauNDI	CATATG	1 cut(s)	1480
FbaI	TGATCA	2 cut(s)	1558, 1662
Fnu4HI	GCNGC	7 cut(s)	41, 680, 1461, 1473, 1476, 1704, 1856
FokI	GGATG	9 cut(s)	191, 662, 822, 897, 1106, 1373, 1548, 1565, 1711
FriOI	GRGCYC	1 cut(s)	1497
Fsp4HI	GCNGC	7 cut(s)	41, 680, 1461, 1473, 1476, 1704, 1856
FspBI	CTAG	2 cut(s)	1367, 1740
GlaI	GCGC	4 cut(s)	6, 96, 1153, 1321
GluI	GCNGC	7 cut(s)	41, 680, 1461, 1473, 1476, 1704, 1856
GsuI	CTGGAG	2 cut(s)	1133, 1422
HaeII	RGCGCY	3 cut(s)	8, 98, 1155
HaeIII	GGCC	7 cut(s)	47, 118, 341, 388, 757, 1315, 1645
HapII	CCGG	4 cut(s)	83, 238, 754, 1137
HgaI	GACGC	2 cut(s)	3, 485
HhaI	GCGC	4 cut(s)	7, 97, 1154, 1322
Hin1I	GRCGYC	2 cut(s)	14, 1152
Hin1II	CATG	8 cut(s)	34, 176, 580, 596, 870, 1280, 1320, 1794
Hin6I	GCGC	4 cut(s)	5, 95, 1152, 1320
HinP1I	GCGC	4 cut(s)	5, 95, 1152, 1320
HindIII	AAGCTT	2 cut(s)	416, 1326
HinfI	GANTC	6 cut(s)	245, 255, 1018, 1265, 1787, 1826
HpaII	CCGG	4 cut(s)	83, 238, 754, 1137
HphI	GGTGA	2 cut(s)	1099, 1856
Hpy166II	GTNNAC	2 cut(s)	1299, 1651
Hpy188III	TCNNGA	8 cut(s)	208, 252, 647, 784, 983, 1262, 1277, 1817
Hpy8I	GTNNAC	2 cut(s)	1299, 1651
Hpy99I	CGWCG	2 cut(s)	68, 253
HpyAV	CCTTC	5 cut(s)	472, 757, 877, 950, 1206
HpyCH4III	ACNGT	4 cut(s)	949, 1469, 1655, 1839
HpyCH4IV	ACGT	1 cut(s)	1812
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 92, 222, 565, 679, 1469, 1855
HpyF3I	CTNAG	7 cut(s)	281, 492, 505, 537, 873, 1508, 1620
HpySE526I	ACGT	1 cut(s)	1812
Hsp92I	GRCGYC	2 cut(s)	14, 1152
Hsp92II	CATG	8 cut(s)	34, 176, 580, 596, 870, 1280, 1320, 1794
HspAI	GCGC	4 cut(s)	5, 95, 1152, 1320
KasI	GGCGCC	1 cut(s)	1151
KpnI	GGTACC	1 cut(s)	1255
Ksp22I	TGATCA	2 cut(s)	1558, 1662
Kzo9I	GATC	5 cut(s)	319, 979, 1558, 1662, 1765
LmnI	GCTCC	3 cut(s)	637, 1114, 1375
Lsp1109I	GCAGC	7 cut(s)	27, 666, 1447, 1459, 1462, 1715, 1867
LweI	GCATC	4 cut(s)	286, 721, 1447, 1726
MaeI	CTAG	2 cut(s)	1367, 1740
MaeII	ACGT	1 cut(s)	1812
MaeIII	GTNAC	3 cut(s)	1075, 1105, 1423
MalI	GATC	5 cut(s)	321, 981, 1560, 1664, 1767
MboI	GATC	5 cut(s)	319, 979, 1558, 1662, 1765
MboII	GAAGA	8 cut(s)	323, 432, 810, 982, 1135, 1745, 1760, 1882
MflI	RGATCY	1 cut(s)	979
MhlI	GDGCHC	1 cut(s)	1497
MlsI	TGGCCA	2 cut(s)	47, 388
MluNI	TGGCCA	2 cut(s)	47, 388
Mly113I	GGCGCC	1 cut(s)	1152
MlyI	GAGTC	1 cut(s)	1820
MmeI	TCCRAC	2 cut(s)	87, 968
Mox20I	TGGCCA	2 cut(s)	47, 388
Mph1103I	ATGCAT	2 cut(s)	279, 634
MscI	TGGCCA	2 cut(s)	47, 388
MslI	CAYNNNNRTG	2 cut(s)	177, 648
Msp20I	TGGCCA	2 cut(s)	47, 388
MspCI	CTTAAG	1 cut(s)	688
MspI	CCGG	4 cut(s)	83, 238, 754, 1137
MspR9I	CCNGG	2 cut(s)	120, 1440
Mva1269I	GAATGC	1 cut(s)	793
MvaI	CCWGG	2 cut(s)	120, 1440
MwoI	GCNNNNNNNGC	7 cut(s)	11, 92, 222, 565, 679, 1469, 1855
NarI	GGCGCC	1 cut(s)	1152
NdeI	CATATG	1 cut(s)	1480
NdeII	GATC	5 cut(s)	319, 979, 1558, 1662, 1765
NheI	GCTAGC	1 cut(s)	1739
NlaIII	CATG	8 cut(s)	34, 176, 580, 596, 870, 1280, 1320, 1794
NlaIV	GGNNCC	5 cut(s)	236, 560, 1153, 1253, 1534
NmuCI	GTSAC	2 cut(s)	1075, 1423
NsiI	ATGCAT	2 cut(s)	279, 634
NspI	RCATGY	2 cut(s)	580, 870
NspV	TTCGAA	1 cut(s)	469
PagI	TCATGA	1 cut(s)	1276
PceI	AGGCCT	1 cut(s)	118
PctI	GAATGC	1 cut(s)	793
PfeI	GAWTC	5 cut(s)	245, 255, 1018, 1265, 1787
PflMI	CCANNNNNTGG	1 cut(s)	384
PkrI	GCNGC	7 cut(s)	42, 681, 1462, 1474, 1477, 1705, 1857
PleI	GAGTC	1 cut(s)	1820
PluTI	GGCGCC	1 cut(s)	1155
PpsI	GAGTC	1 cut(s)	1820
PpuMI	RGGWCCY	1 cut(s)	1684
PsiI	TTATAA	1 cut(s)	857
Psp124BI	GAGCTC	1 cut(s)	1497
Psp5II	RGGWCCY	1 cut(s)	1684
Psp6I	CCWGG	2 cut(s)	118, 1438
PspGI	CCWGG	2 cut(s)	118, 1438
PspN4I	GGNNCC	5 cut(s)	236, 560, 1153, 1253, 1534
PspPI	GGNCC	2 cut(s)	751, 1684
PspPPI	RGGWCCY	1 cut(s)	1684
PstI	CTGCAG	1 cut(s)	747
PstNI	CAGNNNCTG	3 cut(s)	983, 1015, 1427
PsuI	RGATCY	1 cut(s)	979
RsaI	GTAC	5 cut(s)	35, 604, 871, 1064, 1253
RsaNI	GTAC	5 cut(s)	34, 603, 870, 1063, 1252
RseI	CAYNNNNRTG	2 cut(s)	177, 648
SacI	GAGCTC	1 cut(s)	1497
SatI	GCNGC	7 cut(s)	41, 680, 1461, 1473, 1476, 1704, 1856
Sau3AI	GATC	5 cut(s)	319, 979, 1558, 1662, 1765
Sau96I	GGNCC	2 cut(s)	751, 1684
SchI	GAGTC	1 cut(s)	1820
ScrFI	CCNGG	2 cut(s)	120, 1440
SduI	GDGCHC	1 cut(s)	1497
SfaNI	GCATC	4 cut(s)	286, 721, 1447, 1726
SfcI	CTRYAG	4 cut(s)	743, 948, 1673, 1708
SfoI	GGCGCC	1 cut(s)	1153
SfuI	TTCGAA	1 cut(s)	469
SgrAI	CRCCGGYG	1 cut(s)	237
SinI	GGWCC	2 cut(s)	751, 1684
SmiMI	CAYNNNNRTG	2 cut(s)	177, 648
SmlI	CTYRAG	1 cut(s)	688
SmoI	CTYRAG	1 cut(s)	688
SseBI	AGGCCT	1 cut(s)	118
SsiI	CCGC	2 cut(s)	76, 86
SspDI	GGCGCC	1 cut(s)	1151
SspI	AATATT	1 cut(s)	1602
SspMI	CTAG	2 cut(s)	1367, 1740
SstI	GAGCTC	1 cut(s)	1497
StuI	AGGCCT	1 cut(s)	118
StyD4I	CCNGG	2 cut(s)	118, 1438
StyI	CCWWGG	1 cut(s)	156
TaaI	ACNGT	4 cut(s)	949, 1469, 1655, 1839
TaiI	ACGT	1 cut(s)	1815
TaqI	TCGA	2 cut(s)	469, 1764
TatI	WGTACW	4 cut(s)	33, 602, 869, 1062
TfiI	GAWTC	5 cut(s)	245, 255, 1018, 1265, 1787
TseFI	GTSAC	2 cut(s)	1075, 1423
TseI	GCWGC	7 cut(s)	40, 679, 1460, 1472, 1475, 1703, 1855
Tsp45I	GTSAC	2 cut(s)	1075, 1423
TspDTI	ATGAA	7 cut(s)	896, 1110, 1136, 1418, 1750, 1779, 1872
Van91I	CCANNNNNTGG	1 cut(s)	384
Vha464I	CTTAAG	1 cut(s)	688
VpaK11BI	GGWCC	2 cut(s)	751, 1684
XagI	CCTNNNNNAGG	1 cut(s)	1394
XapI	RAATTY	3 cut(s)	450, 842, 1757
XceI	RCATGY	2 cut(s)	580, 870
XspI	CTAG	2 cut(s)	1367, 1740
Zsp2I	ATGCAT	2 cut(s)	279, 634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.