AT3G10360

Nucleic acid binding protein NABP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0007939
Physical Location & Seq
Reverse (-)
3210884 .. 3215621
4738 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G10360.1

Sequence Viewer

Length: 3012 bp
ATGGTTACTAATAGCTACATGGATACGCGATCAAATTTGACAAGTGTGAATCGAGGATCCAATGTGGATCTCGAAGATCGATTCCAGAGGGAGCTCGAATCTTTGCTCCAACAACATCGTAATCAGCAATCATTTGGCCGAGAACGAGAACGAGACATTGATGTTCACAGAAGCGGAAGCGCGCCTCCTACCGTGGAAGGATTGTTGAGAGCTATGGATAATCAGTACTTGAACAATAACAACTCTGATCATAGAGATGTTGGGAATATTAGCAGTATAACCACTAGCAATGGCGTTGAGCTTTTATCTGATGATGAGTTACGTTGGCACCCTGAGTATCTCTCTTATTACTATTCGAATGAGCATTCGAATCCGAGGTTGCCTCCTCCGTTGTTGTCTAGAGAGGATTGGAGGGTTGCTCAGAGGTTTCACAACAGTGAGTCTGTGTTTGATCCTGTTGGGGAATGGAGGAAGAAAACGGTTGAAGTCGACAACTCCTCATCGCTCTTCTCGGTTCAGCCAGGGGTTCCAGTTGAGCAGGCAGAGAATGATTTGATGGAACTGAGGAATGCTGTAGCTCAGGGCCGCTCTCAGAAGGTGCAGCGGCTAGATCAAGGCAGAGAAGACTTGATTGGATTATCTGGATATTCTGGGCTTGGACCGAGAAGGAAGAGTTTTGCTGATATACTTCAGGAAGGACTTGAACGGGATGCAGCCTTAGGCAGCCAACTCTCTCGGCCTGCAAGCTGCAACACTTTTCGGGATATGAAAGATGCTGCTGTTTTATCAAATTTCAGTGCCGGTGGATTTGACAGCCCATTAGCATTCCATGATTCATTACATTCTACTGCCAAAAACAGTCCAAATACTATGCTTGGATCCACCATGAGTTCTCCGGTGCCAAGAAATAGAACTCCTGACTCACATCTAGTAGGACGATCTACGGCCTCTGGCCTTCCCCCTATTGGTACCAGGGTTGGTCCTGTCGAGAAGAAGAATACTTTTGGCACAGCCATCCAAAACTGTGAATCTTACACTGCTGCCGATGTTGCCGACACATTGTCCAGGTTGAACATGTCAGAGATGAGTCAAGTAAAAGAAAACCATATGCAGTCACAGCTTCAAGTGGAACTGGAGAATCAATCTGATGTCATGCGTTACATACCCAATGGTCATAAGAAGGCTTTGCGGCAACAAAATACGGCAGAAACTAAAGATCACTTGTTTTCTGCAAATTATGGTGGAATGAGTGGGTATGGAGCAAGTCTTGGTGCTTCTACAGTGGGTTCCCATGGACAGGTCAACATCCCTAAACGAACCTCCTCTTCAGCGAGTCTCTACTCAACTTCAGACCATTCTAGATTAGGAAGCGTGGGCTTATCTGATGTCAATATTAGGAATGGAAATATTAATGGAACAGACTTCTCCACAGCTGGTGGTTATATGGCAAAGAACAAGTTGAATTCATTAGCTGAGCACTATTCCGCTGAAGGCTCACATTTGACTGGGGATGGGGATAGACAAAGCTTGAACAGATTGATAAATCAAGTTGCTTCTGAGCTTCACTCTCCAGTTATGGACCCACATTACAGCCAGTATCTGCATACGGCATCTTCTACTGCTGCCCCAATCGATCATTCTCTTATTAGAAACAATTTCGGGACTTCAAACGGAGATACGGCTAACGAATACCTCGCGATGTTACTTGCTCAAAACAGGCAACAGCTGGGTAACCTCAATGCTGCAAATTCTAGATTTTTTGAGAGTCCTTCATATGATCTTGGCAACATGTATCTAGGAAACCATTTGCCTTCTCCTTCCAAGAATTCAAGAAATTTCCAGAACATGCGTATGTCACAATCTGCCTCAATGATGAAAGTTCCTTTCGGAGGCTTACAGGGATCATCCCATGTAGATATTGGCAGTACGGCAGAAGCATCCTTACTAGAGGGGTTTAAGAACAACAAGACAAGGTCTTTGGAGCTTTCAGAAATAGTTGGTCATGTGATTGAGTTCAGCATGGATCAGTACGGAAGTCGTTTCATTCAACAGAAACTTGAGACTGCAACGGATGAGGAAAAGAATGCAATATTCCCTGAGATACTTCCTTACGGCCGTACTTTAATGACAGATGTCTTTGGAAATTATGTCATTCAAAAGTTTTTTGAACATGGTACAACCAAGCAGAGAAAAGAACTCGCTGAACAAGTAACAGGCCACGTTTTGGCTCTTTCTCTACAAATGTACGGCTGCAGGGTTATCCAAAAGGCGTTAGAGGTGGTTGAATTGGAGCAGCAAGCTCGAATGGTGAAAGAGCTTGATGGGTCTGTCATGAAATGCGTTCATGACCAGAACGGTAATCATGTGATCCAGAAGTGTATAGAGCGTCTTCCTCAGGATTGGATACAGTTCATCATTTCCTCATTCTACGGAAAAGTTTTAGCTCTTTCAACACACCCTTATGGATGCCGTGTAATCCAGAGGGTACTGGAGCATATTGATGATATAGAAACCCAACGGATCATTATGGAGGAAATCATGGATTCAGTCTGTACTCTAGCACAAGATCAATACGGAAATTATGTTATCCAGCATATCATACAACATGGTAAACCTCATGAACGGTCAGAAATTATCAATAAGCTTGCTGGACAGATTGTGAAGATGAGTCAGCAAAAGTTTGCTTCTAATGTTGTTGAAAAGTGCCTAACATTTGGCGGTCCAGAGGAACGTCAGGTTCTAGTGAATGAGATGCTTGGTTATACTGATGAAAACGAGCCTCTTCAGGCGATGATGAAGGACCCATTTGGGAACTATGTAGTGCAGAAGGTTCTTGAAACATGTGATGATCAAAGTCTTGCACTCATTCTTTCTCGCATCAAAGTACACTTGAATGCCTTGAAGAGATACACATATGGGAAACACATCGTTGCCCGGGTTGAGAAGCTTATCACTACTGGAGAGAGAAGAATCGGACTCTCGTCATCTCTTGCCGCGAACACCACTCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NABP PUF

Protein Analysis

1003

Amino Acids

111.61

Weight (kDa)

6.16

Isoelectric Point (pI)

45.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NABP PF07990 313 - 663 9.4e-47 Nucleic acid binding protein NABP
PUF PF00806 668 - 702 1.7e-11 Pumilio-family RNA binding repeat
PUF PF00806 707 - 737 6.4e-08 Pumilio-family RNA binding repeat
PUF PF00806 740 - 773 1.6e-09 Pumilio-family RNA binding repeat
PUF PF00806 813 - 846 1.5e-11 Pumilio-family RNA binding repeat
PUF PF00806 850 - 882 1.4e-09 Pumilio-family RNA binding repeat
PUF PF00806 885 - 919 5.9e-08 Pumilio-family RNA binding repeat
PUF PF00806 931 - 960 1e-06 Pumilio-family RNA binding repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 968
AccB1I GGYRCC 3 cut(s) 327, 898, 968
AccB7I CCANNNNNTGG 1 cut(s) 2224
AccBSI CCGCTC 1 cut(s) 588
AccI GTMKAC 1 cut(s) 489
AccII CGCG 4 cut(s) 28, 182, 1697, 2996
AciI CCGC 7 cut(s) 174, 586, 604, 1189, 1485, 2718, 2994
AcoI YGGCCR 2 cut(s) 136, 2113
AcsI RAATTY 6 cut(s) 34, 790, 1462, 1747, 1825, 1834
AcuI CTGAAG 5 cut(s) 674, 1311, 1332, 1509, 2768
AfiI CCNNNNNNNGG 4 cut(s) 965, 1297, 1889, 2224
AflIII ACRYGT 3 cut(s) 1074, 1788, 2840
AhdI GACNNNNNGTC 1 cut(s) 1060
AjnI CCWGG 3 cut(s) 520, 971, 1064
AjuI GAANNNNNNNTTGG 4 cut(s) 615, 647, 1621, 1653
AleI CACNNNNGTG 1 cut(s) 435
Alw21I GWGCWC 2 cut(s) 96, 1479
Alw26I GTCTC 3 cut(s) 147, 1340, 2054
AlwNI CAGNNNCTG 1 cut(s) 1600
Ama87I CYCGRG 1 cut(s) 2934
AoxI GGCC 7 cut(s) 136, 583, 737, 945, 952, 2113, 2215
ApoI RAATTY 6 cut(s) 34, 790, 1462, 1747, 1825, 1834
ArsI GACNNNNNNTTYG 2 cut(s) 1960, 1992
AseI ATTAAT 1 cut(s) 1410
Asp718I GGTACC 1 cut(s) 968
AspLEI GCGC 2 cut(s) 182, 184
AspS9I GGNCC 6 cut(s) 583, 659, 980, 1579, 2720, 2800
AsuC2I CCSGG 2 cut(s) 2935, 2936
AsuHPI GGTGA 1 cut(s) 2320
AsuII TTCGAA 2 cut(s) 356, 368
AvaI CYCGRG 1 cut(s) 2934
AvaII GGWCC 5 cut(s) 659, 980, 1579, 2720, 2800
AxyI CCTNAGG 2 cut(s) 718, 2394
BaeI ACNNNNGTAYC 2 cut(s) 960, 993
BamHI GGATCC 2 cut(s) 56, 878
BanI GGYRCC 3 cut(s) 327, 898, 968
BanII GRGCYC 1 cut(s) 96
BarI GAAGNNNNNNTAC 2 cut(s) 1926, 1958
BbsI GAAGAC 2 cut(s) 630, 2381
Bbv12I GWGCWC 2 cut(s) 96, 1479
BccI CCATC 4 cut(s) 550, 1022, 1505, 2315
BceAI ACGGC 9 cut(s) 960, 1218, 1623, 1695, 1944, 2100, 2128, 2263, 2454
BcgI CGANNNNNNTGC 2 cut(s) 2282, 2316
BciT130I CCWGG 3 cut(s) 522, 973, 1066
BciVI GTATCC 2 cut(s) 16, 2397
BclI TGATCA 2 cut(s) 247, 2848
BcnI CCSGG 2 cut(s) 2935, 2936
BcoDI GTCTC 3 cut(s) 147, 1340, 2054
BfmI CTRYAG 3 cut(s) 573, 1278, 2251
BfuI GTATCC 2 cut(s) 16, 2397
BlpI GCTNAGC 1 cut(s) 1473
BmcAI AGTACT 1 cut(s) 227
Bme1390I CCNGG 5 cut(s) 522, 973, 1066, 2935, 2936
Bme18I GGWCC 5 cut(s) 659, 980, 1579, 2720, 2800
BmeRI GACNNNNNGTC 1 cut(s) 1060
BmeT110I CYCGRG 1 cut(s) 2934
BmgT120I GGNCC 6 cut(s) 583, 659, 980, 1579, 2720, 2800
BmiI GGNNCC 9 cut(s) 58, 329, 528, 880, 900, 970, 1288, 1581, 2802
BmrFI CCNGG 5 cut(s) 522, 973, 1066, 2935, 2936
BmrI ACTGGG 1 cut(s) 1515
BmsI GCATC 7 cut(s) 700, 763, 1619, 1946, 2456, 2742, 2886
BmuI ACTGGG 1 cut(s) 1515
BoxI GACNNNNGTC 2 cut(s) 2132, 2980
BpiI GAAGAC 2 cut(s) 630, 2381
BplI GAGNNNNNCTC 8 cut(s) 326, 358, 367, 399, 403, 435, 1550, 1582
BpmI CTGGAG 4 cut(s) 1154, 1554, 2510, 2979
Bpu10I CCTNAGC 1 cut(s) 579
Bpu1102I GCTNAGC 1 cut(s) 1473
Bpu14I TTCGAA 2 cut(s) 356, 368
BpuEI CTTGAG 1 cut(s) 2078
BpuMI CCSGG 2 cut(s) 2935, 2936
Bsa29I ATCGAT 2 cut(s) 79, 1632
BsaJI CCNNGG 6 cut(s) 192, 374, 521, 972, 1291, 2934
BsaWI WCCGGW 1 cut(s) 895
Bsc4I CCNNNNNNNGG 4 cut(s) 965, 1297, 1889, 2224
Bse118I RCCGGY 1 cut(s) 800
Bse1I ACTGG 7 cut(s) 530, 1137, 1510, 1571, 1594, 2493, 2962
Bse21I CCTNAGG 2 cut(s) 718, 2394
Bse3DI GCAATG 1 cut(s) 295
BseBI CCWGG 3 cut(s) 522, 973, 1066
BseCI ATCGAT 2 cut(s) 79, 1632
BseDI CCNNGG 6 cut(s) 192, 374, 521, 972, 1291, 2934
BseGI GGATG 8 cut(s) 715, 1014, 1305, 1516, 1904, 1937, 2077, 2471
BseLI CCNNNNNNNGG 4 cut(s) 965, 1297, 1889, 2224
BseMI GCAATG 1 cut(s) 295
BseMII CTCAG 9 cut(s) 324, 434, 554, 593, 605, 1464, 1548, 2088, 2408
BseNI ACTGG 7 cut(s) 530, 1137, 1510, 1571, 1594, 2493, 2962
BsePI GCGCGC 1 cut(s) 180
BseRI GAGGAG 3 cut(s) 375, 487, 1312
BseX3I CGGCCG 1 cut(s) 2113
BseYI CCCAGC 1 cut(s) 1726
BsgI GTGCAG 2 cut(s) 620, 2843
Bsh1236I CGCG 4 cut(s) 28, 182, 1697, 2996
Bsh1285I CGRYCG 1 cut(s) 2116
BshFI GGCC 7 cut(s) 138, 585, 739, 947, 954, 2115, 2217
BshNI GGYRCC 3 cut(s) 327, 898, 968
BshVI ATCGAT 2 cut(s) 79, 1632
BsiEI CGRYCG 1 cut(s) 2116
BsiHKAI GWGCWC 2 cut(s) 96, 1479
BsiHKCI CYCGRG 1 cut(s) 2934
BsiSI CCGG 3 cut(s) 801, 896, 2935
BslFI GGGAC 1 cut(s) 1675
BslI CCNNNNNNNGG 4 cut(s) 965, 1297, 1889, 2224
BsmAI GTCTC 3 cut(s) 147, 1340, 2054
BsmFI GGGAC 1 cut(s) 1675
BsmI GAATGC 5 cut(s) 364, 574, 824, 2089, 2899
BsnI GGCC 7 cut(s) 138, 585, 739, 947, 954, 2115, 2217
BsoBI CYCGRG 1 cut(s) 2934
Bsp119I TTCGAA 2 cut(s) 356, 368
Bsp1286I GDGCHC 2 cut(s) 96, 1479
Bsp1720I GCTNAGC 1 cut(s) 1473
Bsp19I CCATGG 1 cut(s) 1291
Bsp68I TCGCGA 1 cut(s) 1697
BspACI CCGC 7 cut(s) 174, 586, 604, 1189, 1485, 2718, 2994
BspANI GGCC 7 cut(s) 138, 585, 739, 947, 954, 2115, 2217
BspCNI CTCAG 9 cut(s) 325, 433, 555, 592, 604, 1465, 1549, 2089, 2407
BspDI ATCGAT 2 cut(s) 79, 1632
BspFNI CGCG 4 cut(s) 28, 182, 1697, 2996
BspHI TCATGA 3 cut(s) 2331, 2344, 2617
BspLI GGNNCC 9 cut(s) 58, 329, 528, 880, 900, 970, 1288, 1581, 2802
BspMAI CTGCAG 1 cut(s) 2255
BspQI GCTCTTC 1 cut(s) 512
BspT104I TTCGAA 2 cut(s) 356, 368
BspT107I GGYRCC 3 cut(s) 327, 898, 968
BsrBI CCGCTC 1 cut(s) 588
BsrDI GCAATG 1 cut(s) 295
BsrFI RCCGGY 1 cut(s) 800
BsrI ACTGG 7 cut(s) 530, 1137, 1510, 1571, 1594, 2493, 2962
BssAI RCCGGY 1 cut(s) 800
BssECI CCNNGG 6 cut(s) 192, 374, 521, 972, 1291, 2934
BssHII GCGCGC 1 cut(s) 180
BssT1I CCWWGG 1 cut(s) 1291
Bst2UI CCWGG 3 cut(s) 522, 973, 1066
Bst4CI ACNGT 9 cut(s) 193, 437, 481, 860, 1025, 1282, 2357, 2409, 2625
Bst6I CTCTTC 5 cut(s) 512, 665, 1330, 2787, 2897
BstBI TTCGAA 2 cut(s) 356, 368
BstC8I GCNNGC 6 cut(s) 182, 540, 741, 745, 2298, 2646
BstDSI CCRYGG 2 cut(s) 192, 1291
BstEII GGTNACC 1 cut(s) 1730
BstENI CCTNNNNNAGG 1 cut(s) 1887
BstF5I GGATG 8 cut(s) 715, 1014, 1305, 1516, 1904, 1937, 2077, 2471
BstFNI CGCG 4 cut(s) 28, 182, 1697, 2996
BstHHI GCGC 2 cut(s) 182, 184
BstMAI GTCTC 3 cut(s) 147, 1340, 2054
BstMCI CGRYCG 1 cut(s) 2116
BstMWI GCNNNNNNNGC 2 cut(s) 1049, 1117
BstNI CCWGG 3 cut(s) 522, 973, 1066
BstNSI RCATGY 4 cut(s) 1078, 1792, 1849, 2844
BstPAI GACNNNNGTC 2 cut(s) 2132, 2980
BstPI GGTNACC 1 cut(s) 1730
BstSCI CCNGG 5 cut(s) 520, 971, 1064, 2933, 2934
BstSFI CTRYAG 3 cut(s) 573, 1278, 2251
BstUI CGCG 4 cut(s) 28, 182, 1697, 2996
BstV2I GAAGAC 2 cut(s) 630, 2381
BstX2I RGATCY 3 cut(s) 56, 67, 878
BstYI RGATCY 3 cut(s) 56, 67, 878
BstZI CGGCCG 1 cut(s) 2113
Bsu15I ATCGAT 2 cut(s) 79, 1632
Bsu36I CCTNAGG 2 cut(s) 718, 2394
BsuI GTATCC 2 cut(s) 16, 2397
BsuRI GGCC 7 cut(s) 138, 585, 739, 947, 954, 2115, 2217
BsuTUI ATCGAT 2 cut(s) 79, 1632
BtgI CCRYGG 2 cut(s) 192, 1291
BtgZI GCGATG 3 cut(s) 486, 1712, 2804
BtsCI GGATG 8 cut(s) 715, 1014, 1305, 1516, 1904, 1937, 2077, 2471
BtsI GCAGTG 1 cut(s) 1035
BtsIMutI CAGTG 4 cut(s) 442, 802, 1035, 1287
BtuMI TCGCGA 1 cut(s) 1697
Cac8I GCNNGC 6 cut(s) 182, 540, 741, 745, 2298, 2646
CaiI CAGNNNCTG 1 cut(s) 1600
CciI TCATGA 3 cut(s) 2331, 2344, 2617
CfoI GCGC 2 cut(s) 182, 184
Cfr10I RCCGGY 1 cut(s) 800
Cfr13I GGNCC 6 cut(s) 583, 659, 980, 1579, 2720, 2800
Cfr9I CCCGGG 1 cut(s) 2934
ClaI ATCGAT 2 cut(s) 79, 1632
CseI GACGC 1 cut(s) 2375
DriI GACNNNNNGTC 1 cut(s) 1060
EaeI YGGCCR 2 cut(s) 136, 2113
EagI CGGCCG 1 cut(s) 2113
Eam1104I CTCTTC 5 cut(s) 512, 665, 1330, 2787, 2897
Eam1105I GACNNNNNGTC 1 cut(s) 1060
EarI CTCTTC 5 cut(s) 512, 665, 1330, 2787, 2897
Ecl136II GAGCTC 1 cut(s) 94
EclXI CGGCCG 1 cut(s) 2113
Eco130I CCWWGG 1 cut(s) 1291
Eco24I GRGCYC 1 cut(s) 96
Eco47I GGWCC 5 cut(s) 659, 980, 1579, 2720, 2800
Eco52I CGGCCG 1 cut(s) 2113
Eco53kI GAGCTC 1 cut(s) 94
Eco57I CTGAAG 5 cut(s) 674, 1311, 1332, 1509, 2768
Eco81I CCTNAGG 2 cut(s) 718, 2394
Eco88I CYCGRG 1 cut(s) 2934
Eco91I GGTNACC 1 cut(s) 1730
EcoICRI GAGCTC 1 cut(s) 94
EcoNI CCTNNNNNAGG 1 cut(s) 1887
EcoO109I RGGNCCY 1 cut(s) 2800
EcoO65I GGTNACC 1 cut(s) 1730
EcoRI GAATTC 2 cut(s) 1462, 1825
EcoRII CCWGG 3 cut(s) 520, 971, 1064
EcoT14I CCWWGG 1 cut(s) 1291
EcoT38I GRGCYC 1 cut(s) 96
ErhI CCWWGG 1 cut(s) 1291
FaqI GGGAC 1 cut(s) 1675
FauNDI CATATG 3 cut(s) 1107, 1774, 2914
FbaI TGATCA 2 cut(s) 247, 2848
FblI GTMKAC 1 cut(s) 489
FokI GGATG 8 cut(s) 722, 1001, 1292, 1523, 1891, 1924, 2084, 2478
FriOI GRGCYC 1 cut(s) 96
GlaI GCGC 2 cut(s) 181, 183
GsaI CCCAGC 1 cut(s) 1730
GsuI CTGGAG 4 cut(s) 1154, 1554, 2510, 2979
HaeIII GGCC 7 cut(s) 138, 585, 739, 947, 954, 2115, 2217
HapII CCGG 3 cut(s) 801, 896, 2935
HgaI GACGC 1 cut(s) 2375
HhaI GCGC 2 cut(s) 182, 184
Hin6I GCGC 2 cut(s) 180, 182
HinP1I GCGC 2 cut(s) 180, 182
HincII GTYRAC 2 cut(s) 490, 1303
HindII GTYRAC 2 cut(s) 490, 1303
HindIII AAGCTT 3 cut(s) 1525, 2642, 2945
HpaII CCGG 3 cut(s) 801, 896, 2935
HphI GGTGA 1 cut(s) 2320
Hpy166II GTNNAC 5 cut(s) 166, 490, 1303, 2612, 2887
Hpy8I GTNNAC 5 cut(s) 166, 490, 1303, 2612, 2887
HpyCH4III ACNGT 9 cut(s) 193, 437, 481, 860, 1025, 1282, 2357, 2409, 2625
HpyCH4IV ACGT 3 cut(s) 322, 2220, 2731
HpyF10VI GCNNNNNNNGC 2 cut(s) 1049, 1117
HpySE526I ACGT 3 cut(s) 322, 2220, 2731
HspAI GCGC 2 cut(s) 180, 182
KpnI GGTACC 1 cut(s) 972
Ksp22I TGATCA 2 cut(s) 247, 2848
LguI GCTCTTC 1 cut(s) 512
LmnI GCTCC 6 cut(s) 91, 111, 1259, 1981, 2290, 2491
LweI GCATC 7 cut(s) 700, 763, 1619, 1946, 2456, 2742, 2886
MaeII ACGT 3 cut(s) 322, 2220, 2731
MaeIII GTNAC 8 cut(s) 4, 318, 1113, 1157, 1701, 1730, 1854, 2209
MbiI CCGCTC 1 cut(s) 588
MflI RGATCY 3 cut(s) 56, 67, 878
MhlI GDGCHC 2 cut(s) 96, 1479
MlyI GAGTC 7 cut(s) 449, 914, 1096, 1342, 1774, 2677, 2970
MmeI TCCRAC 1 cut(s) 133
MseI TTAA 3 cut(s) 1410, 1956, 2123
MslI CAYNNNNRTG 6 cut(s) 255, 435, 1850, 2460, 2499, 2892
MspA1I CMGCKG 4 cut(s) 604, 1433, 1487, 1726
MspI CCGG 3 cut(s) 801, 896, 2935
MspR9I CCNGG 5 cut(s) 522, 973, 1066, 2935, 2936
Mva1269I GAATGC 5 cut(s) 364, 574, 824, 2089, 2899
MvaI CCWGG 3 cut(s) 522, 973, 1066
MvnI CGCG 4 cut(s) 28, 182, 1697, 2996
MwoI GCNNNNNNNGC 2 cut(s) 1049, 1117
NciI CCSGG 2 cut(s) 2935, 2936
NcoI CCATGG 1 cut(s) 1291
NdeI CATATG 3 cut(s) 1107, 1774, 2914
NlaIV GGNNCC 9 cut(s) 58, 329, 528, 880, 900, 970, 1288, 1581, 2802
NmeAIII GCCGAG 2 cut(s) 164, 715
NmuCI GTSAC 2 cut(s) 1113, 1854
NruI TCGCGA 1 cut(s) 1697
NspI RCATGY 4 cut(s) 1078, 1792, 1849, 2844
NspV TTCGAA 2 cut(s) 356, 368
OliI CACNNNNGTG 1 cut(s) 435
PagI TCATGA 3 cut(s) 2331, 2344, 2617
PauI GCGCGC 1 cut(s) 180
PciI ACATGT 3 cut(s) 1074, 1788, 2840
PciSI GCTCTTC 1 cut(s) 512
PctI GAATGC 5 cut(s) 364, 574, 824, 2089, 2899
PfeI GAWTC 9 cut(s) 49, 81, 98, 370, 833, 1028, 1138, 2543, 2970
PflFI GACNNNGTC 1 cut(s) 1972
PflMI CCANNNNNTGG 1 cut(s) 2224
PleI GAGTC 7 cut(s) 448, 914, 1095, 1341, 1773, 2676, 2970
PpsI GAGTC 7 cut(s) 448, 914, 1095, 1341, 1773, 2676, 2970
PpuMI RGGWCCY 1 cut(s) 2800
PscI ACATGT 3 cut(s) 1074, 1788, 2840
PshAI GACNNNNGTC 2 cut(s) 2132, 2980
PshBI ATTAAT 1 cut(s) 1410
Psp124BI GAGCTC 1 cut(s) 96
Psp5II RGGWCCY 1 cut(s) 2800
Psp6I CCWGG 3 cut(s) 520, 971, 1064
PspEI GGTNACC 1 cut(s) 1730
PspFI CCCAGC 1 cut(s) 1726
PspGI CCWGG 3 cut(s) 520, 971, 1064
PspN4I GGNNCC 9 cut(s) 58, 329, 528, 880, 900, 970, 1288, 1581, 2802
PspPI GGNCC 6 cut(s) 583, 659, 980, 1579, 2720, 2800
PspPPI RGGWCCY 1 cut(s) 2800
PstI CTGCAG 1 cut(s) 2255
PstNI CAGNNNCTG 1 cut(s) 1600
PsuI RGATCY 3 cut(s) 56, 67, 878
PsyI GACNNNGTC 1 cut(s) 1972
PteI GCGCGC 1 cut(s) 180
PvuII CAGCTG 2 cut(s) 1433, 1726
RruI TCGCGA 1 cut(s) 1697
RseI CAYNNNNRTG 6 cut(s) 255, 435, 1850, 2460, 2499, 2892
SacI GAGCTC 1 cut(s) 96
SalI GTCGAC 1 cut(s) 488
SapI GCTCTTC 1 cut(s) 512
SaqAI TTAA 3 cut(s) 1410, 1956, 2123
Sau96I GGNCC 6 cut(s) 583, 659, 980, 1579, 2720, 2800
ScaI AGTACT 1 cut(s) 227
SchI GAGTC 7 cut(s) 449, 914, 1096, 1342, 1774, 2677, 2970
ScrFI CCNGG 5 cut(s) 522, 973, 1066, 2935, 2936
SduI GDGCHC 2 cut(s) 96, 1479
SfaNI GCATC 7 cut(s) 700, 763, 1619, 1946, 2456, 2742, 2886
SfcI CTRYAG 3 cut(s) 573, 1278, 2251
SfuI TTCGAA 2 cut(s) 356, 368
SinI GGWCC 5 cut(s) 659, 980, 1579, 2720, 2800
SmaI CCCGGG 1 cut(s) 2936
SmiMI CAYNNNNRTG 6 cut(s) 255, 435, 1850, 2460, 2499, 2892
SmlI CTYRAG 1 cut(s) 2057
SmoI CTYRAG 1 cut(s) 2057
SsiI CCGC 7 cut(s) 174, 586, 604, 1189, 1485, 2718, 2994
SspI AATATT 4 cut(s) 268, 1393, 1408, 2091
SstI GAGCTC 1 cut(s) 96
StyD4I CCNGG 5 cut(s) 520, 971, 1064, 2933, 2934
StyI CCWWGG 1 cut(s) 1291
TaaI ACNGT 9 cut(s) 193, 437, 481, 860, 1025, 1282, 2357, 2409, 2625
TaiI ACGT 3 cut(s) 325, 2223, 2734
TaqII GACCGA 1 cut(s) 676
TatI WGTACW 3 cut(s) 225, 2552, 2884
TauI GCSGC 4 cut(s) 588, 607, 1192, 2996
TfiI GAWTC 9 cut(s) 49, 81, 98, 370, 833, 1028, 1138, 2543, 2970
Tru1I TTAA 3 cut(s) 1410, 1956, 2123
Tru9I TTAA 3 cut(s) 1410, 1956, 2123
TscAI CASTG 4 cut(s) 442, 802, 1042, 1287
TseFI GTSAC 2 cut(s) 1113, 1854
Tsp45I GTSAC 2 cut(s) 1113, 1854
TspGWI ACGGA 7 cut(s) 378, 1686, 2046, 2084, 2445, 2533, 2589
TspMI CCCGGG 1 cut(s) 2934
TspRI CASTG 4 cut(s) 442, 802, 1042, 1287
Tth111I GACNNNGTC 1 cut(s) 1972
Van91I CCANNNNNTGG 1 cut(s) 2224
VpaK11BI GGWCC 5 cut(s) 659, 980, 1579, 2720, 2800
VspI ATTAAT 1 cut(s) 1410
XagI CCTNNNNNAGG 1 cut(s) 1887
XapI RAATTY 6 cut(s) 34, 790, 1462, 1747, 1825, 1834
XbaI TCTAGA 3 cut(s) 398, 1358, 1751
XceI RCATGY 4 cut(s) 1078, 1792, 1849, 2844
XcmI CCANNNNNNNNNTGG 1 cut(s) 1916
XmaI CCCGGG 1 cut(s) 2934
XmiI GTMKAC 1 cut(s) 489
ZrmI AGTACT 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.