Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004408

Physical Location & Seq

Genomic Coordinates Forward (+)

41793620 .. 41799551

Gene Structure 5932 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0301800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1284 bp

ATGGGTAACAATGATGAAGTGAAATCTGTGAAGACTGAAAAATCATCTCCACCTCTGACTACGGATCCCAAAAACCATACCAATCAGACGAATATTCATGTTTATCCTGATTGGGCAGCCATGCAGGCATATTATGGTCCCAGACTTCCTATGCCCCCATATTACAACGCACCAGCTGCTTCTGGCCATGCTCCCCATCCATATATGTGGGGCCCACCACAGACTATGATGCCACCCTATGGGGCACCTTATGCAGCAATATACTCTCATGGAAGTGTCTATGCACATCCAGCAGTTCCTCTTGGTTCAAATGGTCAAGGGGTTCCACTATCACCTGCTGCTGCAAATCCTTCAAGTATGGAAACACCTACAAAGTCATCTGGTAATAACGATCGAGCGTTAGTGAAAAAGCCAAAAGGATTTGATGCACTTGAAATGTCAATAGGCAATGGTAATGCTGAGAATGCTGAAGGTGGAGCTGATCAGTCTCTCTCCAAGAGTTCCGCAACTGAAGGTTCTAGTAGTGATGGGAATACTTCTGGGGCAAATCAAACCAGAAGAAAAAGAACTCGTGAGGGAACACCCACCACTGTTGCGGCAATAGCTGGAGATCAGAAACCGGAAATGCAGGCCAGTCTGGCTTCTGCAAAGGATGTAAACCCGGCTTCGTATAAGGCATTGGGTACAACTATTGCTGCTGTTGGTGTCCCAGGAAAATTGGTCAGACCAGCAGTTTCTCCTGGCATGACCAATGTGTTGGAACTCAAGAATTCATCCAACTTGAACTTGACTAGCGCTACTAGTGTTCAACAACCCTGTGCAGTTTTGCCTCCAGAGACCTGGTTACAGAATGAAAGGGAGCTCAAACGGGAGAGGAGGAAACAATCTAATAGGGAATCTGCTAGAAGATCCAGGTTGAGGAAGCAGGCTGAGACTGATGAACTTGCACGAAAAGTAGAGGCCTTAAATGCTGATAATGTGTCTCTTAAGTCTGAAATAAATCGATTGACAGAAAGTTCTGATAGACTGAGGGTTGAAAATGCTTCACTAATGGAGAAACTGAAAAAAGCACGTGTAGGACGAATGGAAGAGATTATCATGAAAATTGATGATAACAGGGTCGAAGCTATTAGTACAGAAAACCTGCTGTCAAGAGTCAATAACTCCGGTGCATTAGCTAGAGATGTTGAGGAAGAGGGTAGCATGTATGAGAAAAACGCTGGGGCGAAGCTGCATCAGCTCCTGGATGCGAGTCCAAGGACTGATGCCATTGTTGCTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009636 GO:0009987 GO:0015035 GO:0015036 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0019725 GO:0033554 GO:0034599 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0047134 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko04621 ko05418 map04621 map05418

Pfam Domains

Protein Families

Thioredoxin

Protein Analysis

427

Amino Acids

45.9

Weight (kDa)

9.0

Isoelectric Point (pI)

43.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFMR	PF07777	1 - 100	2.8e-33	G-box binding protein MFMR
MFMR_assoc	PF16596	131 - 247	4e-13	Disordered region downstream of MFMR
bZIP_1	PF00170	285 - 347	2.3e-18	bZIP transcription factor
bZIP_2	PF07716	287 - 337	2.9e-07	Basic region leucine zipper

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004408)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04260
fragaria_vesca	FvH4_7g18880 FvH4_7g18880 FvH4_7g18880 FvH4_7g18880 FvH4_7g18880 FvH4_7g18880
malus_domestica	MD01G1104800.v1.1
prunus_persica	Prupe.2G210100_v2.0.a1 Prupe.2G210100_v2.0.a1 Prupe.2G210100_v2.0.a1
pyrus_communis	pycom01g13140
rosa_chinensis	RchiOBHm_Chr1g0362831 RchiOBHm_Chr5g0036621 RchiOBHm_Chr7g0239631
rosa_laevigata	RLG00000027619
rosa_multiflora	Rmu_sc0005055.1_g000016 Rmu_sc0006739.1_g000005 Rmu_sc0035177.1_g000002
rosa_roxburghii	Rroxscaffold_4G00293730 Rroxscaffold_5G00347900
rosa_rugosa	Rorug01G0301700 Rorug01G0301800 Rorug06G0050200
rosa_samantha	Rh1AG310600 Rh1BG029700 Rh1BG273700 Rh1CG290900 Rh1DG304500 Rh2CG160200 Rh5CG416200
rosa_wichuraiana	Rw1G027530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	343
Acc36I	ACCTGC	2 cut(s)	343, 1152
AccB1I	GGYRCC	1 cut(s)	244
AccB7I	CCANNNNNTGG	1 cut(s)	239
AciI	CCGC	2 cut(s)	504, 596
AclWI	GGATC	3 cut(s)	59, 72, 903
AcoI	YGGCCR	1 cut(s)	184
AcsI	RAATTY	1 cut(s)	769
AcuI	CTGAAG	2 cut(s)	489, 531
AcvI	CACGTG	1 cut(s)	1073
AfaI	GTAC	2 cut(s)	685, 1135
AfeI	AGCGCT	1 cut(s)	796
AfiI	CCNNNNNNNGG	2 cut(s)	239, 918
AflII	CTTAAG	1 cut(s)	986
AflIII	ACRYGT	1 cut(s)	1072
AgsI	TTSAA	6 cut(s)	309, 354, 434, 784, 809, 1037
AhlI	ACTAGT	1 cut(s)	800
AjnI	CCWGG	5 cut(s)	709, 739, 839, 911, 1242
AluBI	AGCT	9 cut(s)	176, 479, 605, 862, 1127, 1178, 1231, 1240, 1281
AluI	AGCT	9 cut(s)	176, 479, 605, 862, 1127, 1178, 1231, 1240, 1281
Alw21I	GWGCWC	1 cut(s)	864
Alw26I	GTCTC	4 cut(s)	492, 830, 926, 987
AlwI	GGATC	3 cut(s)	59, 72, 903
AlwNI	CAGNNNCTG	1 cut(s)	1243
Aor51HI	AGCGCT	1 cut(s)	796
AoxI	GGCC	4 cut(s)	184, 211, 630, 960
ApaI	GGGCCC	1 cut(s)	215
ApeKI	GCWGC	7 cut(s)	116, 176, 254, 338, 341, 695, 1231
ApoI	RAATTY	1 cut(s)	769
AspLEI	GCGC	1 cut(s)	797
AspS9I	GGNCC	3 cut(s)	137, 211, 212
AsuC2I	CCSGG	1 cut(s)	662
AsuHPI	GGTGA	1 cut(s)	324
AsuNHI	GCTAGC	1 cut(s)	1277
AvaII	GGWCC	1 cut(s)	137
BaeGI	GKGCMC	2 cut(s)	215, 247
BalI	TGGCCA	1 cut(s)	186
BamHI	GGATCC	1 cut(s)	64
BanI	GGYRCC	1 cut(s)	244
BanII	GRGCYC	2 cut(s)	215, 864
BauI	CACGAG	1 cut(s)	570
BbrPI	CACGTG	1 cut(s)	1073
BbsI	GAAGAC	1 cut(s)	38
Bbv12I	GWGCWC	1 cut(s)	864
BbvI	GCAGC	7 cut(s)	128, 163, 266, 325, 328, 682, 1218
BccI	CCATC	2 cut(s)	204, 521
BciT130I	CCWGG	5 cut(s)	711, 741, 841, 913, 1244
BclI	TGATCA	1 cut(s)	481
BcnI	CCSGG	1 cut(s)	662
BcoDI	GTCTC	4 cut(s)	492, 830, 926, 987
BcuI	ACTAGT	1 cut(s)	800
BfaI	CTAG	7 cut(s)	519, 792, 801, 903, 1179, 1278, 1282
BfoI	RGCGCY	1 cut(s)	798
BfrI	CTTAAG	1 cut(s)	986
BfuAI	ACCTGC	2 cut(s)	343, 1152
BglI	GCCNNNNNGGC	2 cut(s)	125, 638
BisI	GCNGC	8 cut(s)	117, 177, 255, 339, 342, 597, 696, 1232
BlsI	GCNGC	8 cut(s)	118, 178, 256, 340, 343, 598, 697, 1233
Bme1390I	CCNGG	6 cut(s)	662, 711, 741, 841, 913, 1244
Bme18I	GGWCC	1 cut(s)	137
BmgT120I	GGNCC	3 cut(s)	137, 211, 212
BmiI	GGNNCC	6 cut(s)	66, 139, 212, 213, 246, 324
BmrFI	CCNGG	6 cut(s)	662, 711, 741, 841, 913, 1244
BmsI	GCATC	5 cut(s)	219, 415, 1237, 1243, 1255
BmtI	GCTAGC	1 cut(s)	1281
BpiI	GAAGAC	1 cut(s)	38
BpmI	CTGGAG	2 cut(s)	627, 816
BpuEI	CTTGAG	1 cut(s)	749
BpuMI	CCSGG	1 cut(s)	662
Bsa29I	ATCGAT	1 cut(s)	1003
BsaAI	YACGTR	1 cut(s)	1073
BsaI	GGTCTC	1 cut(s)	830
BsaJI	CCNNGG	2 cut(s)	709, 1256
BsaWI	WCCGGW	2 cut(s)	619, 1166
Bsc4I	CCNNNNNNNGG	2 cut(s)	239, 918
Bse1I	ACTGG	1 cut(s)	633
Bse3DI	GCAATG	1 cut(s)	454
BseBI	CCWGG	5 cut(s)	711, 741, 841, 913, 1244
BseCI	ATCGAT	1 cut(s)	1003
BseDI	CCNNGG	2 cut(s)	709, 1256
BseGI	GGATG	5 cut(s)	196, 286, 658, 773, 1252
BseLI	CCNNNNNNNGG	2 cut(s)	239, 918
BseMI	GCAATG	1 cut(s)	454
BseMII	CTCAG	3 cut(s)	450, 921, 1019
BseNI	ACTGG	1 cut(s)	633
BseRI	GAGGAG	1 cut(s)	889
BseSI	GKGCMC	2 cut(s)	215, 247
BseXI	GCAGC	7 cut(s)	128, 163, 266, 325, 328, 682, 1218
BseYI	CCCAGC	1 cut(s)	1220
BsgI	GTGCAG	1 cut(s)	840
Bsh1285I	CGRYCG	1 cut(s)	394
BshFI	GGCC	4 cut(s)	186, 213, 632, 962
BshNI	GGYRCC	1 cut(s)	244
BshVI	ATCGAT	1 cut(s)	1003
BsiEI	CGRYCG	1 cut(s)	394
BsiHKAI	GWGCWC	1 cut(s)	864
BsiSI	CCGG	3 cut(s)	620, 662, 1167
BslFI	GGGAC	2 cut(s)	123, 692
BslI	CCNNNNNNNGG	2 cut(s)	239, 918
BsmAI	GTCTC	4 cut(s)	492, 830, 926, 987
BsmFI	GGGAC	2 cut(s)	123, 692
BsmI	GAATGC	1 cut(s)	469
BsnI	GGCC	4 cut(s)	186, 213, 632, 962
Bso31I	GGTCTC	1 cut(s)	830
Bsp120I	GGGCCC	1 cut(s)	211
Bsp1286I	GDGCHC	3 cut(s)	215, 247, 864
Bsp143I	GATC	5 cut(s)	64, 391, 481, 610, 908
BspACI	CCGC	2 cut(s)	504, 596
BspANI	GGCC	4 cut(s)	186, 213, 632, 962
BspCNI	CTCAG	3 cut(s)	451, 922, 1020
BspDI	ATCGAT	1 cut(s)	1003
BspHI	TCATGA	1 cut(s)	1098
BspLI	GGNNCC	6 cut(s)	66, 139, 212, 213, 246, 324
BspMI	ACCTGC	2 cut(s)	343, 1152
BspOI	GCTAGC	1 cut(s)	1281
BspPI	GGATC	3 cut(s)	59, 72, 903
BspT107I	GGYRCC	1 cut(s)	244
BspTI	CTTAAG	1 cut(s)	986
BspTNI	GGTCTC	1 cut(s)	830
BsrDI	GCAATG	1 cut(s)	454
BsrI	ACTGG	1 cut(s)	633
BssECI	CCNNGG	2 cut(s)	709, 1256
BssMI	GATC	5 cut(s)	64, 391, 481, 610, 908
BssSI	CACGAG	1 cut(s)	570
BssT1I	CCWWGG	1 cut(s)	1256
Bst2BI	CACGAG	1 cut(s)	570
Bst2UI	CCWGG	5 cut(s)	711, 741, 841, 913, 1244
Bst4CI	ACNGT	1 cut(s)	592
Bst6I	CTCTTC	2 cut(s)	1083, 1188
BstAFI	CTTAAG	1 cut(s)	986
BstAPI	GCANNNNNTGC	2 cut(s)	176, 251
BstBAI	YACGTR	1 cut(s)	1073
BstC8I	GCNNGC	4 cut(s)	126, 630, 927, 1279
BstDEI	CTNAG	3 cut(s)	459, 930, 1028
BstF5I	GGATG	5 cut(s)	196, 286, 658, 773, 1252
BstH2I	RGCGCY	1 cut(s)	798
BstHHI	GCGC	1 cut(s)	797
BstKTI	GATC	5 cut(s)	67, 394, 484, 613, 911
BstMAI	GTCTC	4 cut(s)	492, 830, 926, 987
BstMBI	GATC	5 cut(s)	64, 391, 481, 610, 908
BstMCI	CGRYCG	1 cut(s)	394
BstNI	CCWGG	5 cut(s)	711, 741, 841, 913, 1244
BstNSI	RCATGY	1 cut(s)	1207
BstSCI	CCNGG	6 cut(s)	660, 709, 739, 839, 911, 1242
BstSLI	GKGCMC	2 cut(s)	215, 247
BstV1I	GCAGC	7 cut(s)	128, 163, 266, 325, 328, 682, 1218
BstV2I	GAAGAC	1 cut(s)	38
BstX2I	RGATCY	2 cut(s)	64, 908
BstXI	CCANNNNNNTGG	3 cut(s)	207, 757, 840
BstYI	RGATCY	2 cut(s)	64, 908
Bsu15I	ATCGAT	1 cut(s)	1003
BsuRI	GGCC	4 cut(s)	186, 213, 632, 962
BsuTUI	ATCGAT	1 cut(s)	1003
BtsCI	GGATG	5 cut(s)	196, 286, 658, 773, 1252
BtsIMutI	CAGTG	1 cut(s)	588
BveI	ACCTGC	2 cut(s)	343, 1152
Cac8I	GCNNGC	4 cut(s)	126, 630, 927, 1279
CaiI	CAGNNNCTG	1 cut(s)	1243
CciI	TCATGA	1 cut(s)	1098
CfoI	GCGC	1 cut(s)	797
Cfr13I	GGNCC	3 cut(s)	137, 211, 212
ClaI	ATCGAT	1 cut(s)	1003
CsiI	ACCWGGT	1 cut(s)	839
Csp6I	GTAC	2 cut(s)	684, 1134
CspCI	CAANNNNNGTGG	2 cut(s)	574, 609
CviAII	CATG	7 cut(s)	98, 121, 188, 269, 745, 1099, 1204
CviQI	GTAC	2 cut(s)	684, 1134
DdeI	CTNAG	3 cut(s)	459, 930, 1028
DpnI	GATC	5 cut(s)	66, 393, 483, 612, 910
DpnII	GATC	5 cut(s)	64, 391, 481, 610, 908
EaeI	YGGCCR	1 cut(s)	184
Eam1104I	CTCTTC	2 cut(s)	1083, 1188
EarI	CTCTTC	2 cut(s)	1083, 1188
Ecl136II	GAGCTC	1 cut(s)	862
Eco130I	CCWWGG	1 cut(s)	1256
Eco147I	AGGCCT	1 cut(s)	962
Eco24I	GRGCYC	2 cut(s)	215, 864
Eco31I	GGTCTC	1 cut(s)	830
Eco47I	GGWCC	1 cut(s)	137
Eco47III	AGCGCT	1 cut(s)	796
Eco53kI	GAGCTC	1 cut(s)	862
Eco57I	CTGAAG	2 cut(s)	489, 531
Eco72I	CACGTG	1 cut(s)	1073
EcoICRI	GAGCTC	1 cut(s)	862
EcoO109I	RGGNCCY	1 cut(s)	211
EcoRI	GAATTC	1 cut(s)	769
EcoRII	CCWGG	5 cut(s)	709, 739, 839, 911, 1242
EcoT14I	CCWWGG	1 cut(s)	1256
EcoT38I	GRGCYC	2 cut(s)	215, 864
ErhI	CCWWGG	1 cut(s)	1256
FaeI	CATG	7 cut(s)	101, 124, 191, 272, 748, 1102, 1207
FaqI	GGGAC	2 cut(s)	123, 692
FatI	CATG	7 cut(s)	97, 120, 187, 268, 744, 1098, 1203
FbaI	TGATCA	1 cut(s)	481
Fnu4HI	GCNGC	8 cut(s)	117, 177, 255, 339, 342, 597, 696, 1232
FokI	GGATG	5 cut(s)	183, 273, 665, 760, 1259
FriOI	GRGCYC	2 cut(s)	215, 864
Fsp4HI	GCNGC	8 cut(s)	117, 177, 255, 339, 342, 597, 696, 1232
FspBI	CTAG	7 cut(s)	519, 792, 801, 903, 1179, 1278, 1282
GlaI	GCGC	1 cut(s)	796
GluI	GCNGC	8 cut(s)	117, 177, 255, 339, 342, 597, 696, 1232
GsaI	CCCAGC	1 cut(s)	1224
GsuI	CTGGAG	2 cut(s)	627, 816
HaeII	RGCGCY	1 cut(s)	798
HaeIII	GGCC	4 cut(s)	186, 213, 632, 962
HapII	CCGG	3 cut(s)	620, 662, 1167
HhaI	GCGC	1 cut(s)	797
Hin1II	CATG	7 cut(s)	101, 124, 191, 272, 748, 1102, 1207
Hin6I	GCGC	1 cut(s)	795
HinP1I	GCGC	1 cut(s)	795
HinfI	GANTC	3 cut(s)	896, 1155, 1252
HpaII	CCGG	3 cut(s)	620, 662, 1167
HphI	GGTGA	1 cut(s)	324
Hpy166II	GTNNAC	1 cut(s)	658
Hpy188I	TCNGA	6 cut(s)	57, 87, 615, 725, 994, 1021
Hpy188III	TCNNGA	6 cut(s)	107, 572, 766, 833, 1099, 1152
Hpy8I	GTNNAC	1 cut(s)	658
HpyAV	CCTTC	3 cut(s)	360, 464, 506
HpyCH4III	ACNGT	1 cut(s)	592
HpyCH4IV	ACGT	1 cut(s)	1072
HpyF3I	CTNAG	3 cut(s)	459, 930, 1028
HpySE526I	ACGT	1 cut(s)	1072
Hsp92II	CATG	7 cut(s)	101, 124, 191, 272, 748, 1102, 1207
HspAI	GCGC	1 cut(s)	795
Ksp22I	TGATCA	1 cut(s)	481
Kzo9I	GATC	5 cut(s)	64, 391, 481, 610, 908
LmnI	GCTCC	4 cut(s)	196, 476, 859, 1245
Lsp1109I	GCAGC	7 cut(s)	128, 163, 266, 325, 328, 682, 1218
LweI	GCATC	5 cut(s)	219, 415, 1237, 1243, 1255
MabI	ACCWGGT	1 cut(s)	839
MaeI	CTAG	7 cut(s)	519, 792, 801, 903, 1179, 1278, 1282
MaeII	ACGT	1 cut(s)	1072
MaeIII	GTNAC	2 cut(s)	5, 843
MalI	GATC	5 cut(s)	66, 393, 483, 612, 910
MboI	GATC	5 cut(s)	64, 391, 481, 610, 908
MboII	GAAGA	5 cut(s)	43, 570, 918, 1100, 1205
MflI	RGATCY	2 cut(s)	64, 908
MhlI	GDGCHC	3 cut(s)	215, 247, 864
MlsI	TGGCCA	1 cut(s)	186
MluCI	AATT	3 cut(s)	716, 769, 1104
MluNI	TGGCCA	1 cut(s)	186
MlyI	GAGTC	2 cut(s)	1164, 1261
MmeI	TCCRAC	2 cut(s)	738, 801
Mox20I	TGGCCA	1 cut(s)	186
MscI	TGGCCA	1 cut(s)	186
MseI	TTAA	2 cut(s)	965, 987
MslI	CAYNNNNRTG	2 cut(s)	205, 273
Msp20I	TGGCCA	1 cut(s)	186
MspA1I	CMGCKG	1 cut(s)	176
MspCI	CTTAAG	1 cut(s)	986
MspI	CCGG	3 cut(s)	620, 662, 1167
MspR9I	CCNGG	6 cut(s)	662, 711, 741, 841, 913, 1244
Mva1269I	GAATGC	1 cut(s)	469
MvaI	CCWGG	5 cut(s)	711, 741, 841, 913, 1244
NciI	CCSGG	1 cut(s)	662
NdeII	GATC	5 cut(s)	64, 391, 481, 610, 908
NheI	GCTAGC	1 cut(s)	1277
NlaIII	CATG	7 cut(s)	101, 124, 191, 272, 748, 1102, 1207
NlaIV	GGNNCC	6 cut(s)	66, 139, 212, 213, 246, 324
NspI	RCATGY	1 cut(s)	1207
PagI	TCATGA	1 cut(s)	1098
PaqCI	CACCTGC	1 cut(s)	343
PceI	AGGCCT	1 cut(s)	962
PcsI	WCGNNNNNNNCGW	1 cut(s)	1078
PctI	GAATGC	1 cut(s)	469
PfeI	GAWTC	1 cut(s)	896
PflMI	CCANNNNNTGG	1 cut(s)	239
PfoI	TCCNGGA	1 cut(s)	1242
PkrI	GCNGC	8 cut(s)	118, 178, 256, 340, 343, 598, 697, 1233
Ple19I	CGATCG	1 cut(s)	394
PleI	GAGTC	2 cut(s)	1163, 1260
PmaCI	CACGTG	1 cut(s)	1073
PmlI	CACGTG	1 cut(s)	1073
PpsI	GAGTC	2 cut(s)	1163, 1260
Ppu21I	YACGTR	1 cut(s)	1073
Psp124BI	GAGCTC	1 cut(s)	864
Psp6I	CCWGG	5 cut(s)	709, 739, 839, 911, 1242
PspCI	CACGTG	1 cut(s)	1073
PspFI	CCCAGC	1 cut(s)	1220
PspGI	CCWGG	5 cut(s)	709, 739, 839, 911, 1242
PspN4I	GGNNCC	6 cut(s)	66, 139, 212, 213, 246, 324
PspOMI	GGGCCC	1 cut(s)	211
PspPI	GGNCC	3 cut(s)	137, 211, 212
PstNI	CAGNNNCTG	1 cut(s)	1243
PsuI	RGATCY	2 cut(s)	64, 908
PvuI	CGATCG	1 cut(s)	394
PvuII	CAGCTG	1 cut(s)	176
RsaI	GTAC	2 cut(s)	685, 1135
RsaNI	GTAC	2 cut(s)	684, 1134
RseI	CAYNNNNRTG	2 cut(s)	205, 273
SacI	GAGCTC	1 cut(s)	864
SaqAI	TTAA	2 cut(s)	965, 987
SatI	GCNGC	8 cut(s)	117, 177, 255, 339, 342, 597, 696, 1232
Sau3AI	GATC	5 cut(s)	64, 391, 481, 610, 908
Sau96I	GGNCC	3 cut(s)	137, 211, 212
SchI	GAGTC	2 cut(s)	1164, 1261
ScrFI	CCNGG	6 cut(s)	662, 711, 741, 841, 913, 1244
SduI	GDGCHC	3 cut(s)	215, 247, 864
SexAI	ACCWGGT	1 cut(s)	839
SfaNI	GCATC	5 cut(s)	219, 415, 1237, 1243, 1255
SinI	GGWCC	1 cut(s)	137
SmiMI	CAYNNNNRTG	2 cut(s)	205, 273
SmlI	CTYRAG	2 cut(s)	764, 986
SmoI	CTYRAG	2 cut(s)	764, 986
SpeI	ACTAGT	1 cut(s)	800
Sse9I	AATT	3 cut(s)	716, 769, 1104
SseBI	AGGCCT	1 cut(s)	962
SsiI	CCGC	2 cut(s)	504, 596
SspI	AATATT	1 cut(s)	94
SspMI	CTAG	7 cut(s)	519, 792, 801, 903, 1179, 1278, 1282
SstI	GAGCTC	1 cut(s)	864
StuI	AGGCCT	1 cut(s)	962
StyD4I	CCNGG	6 cut(s)	660, 709, 739, 839, 911, 1242
StyI	CCWWGG	1 cut(s)	1256
TaaI	ACNGT	1 cut(s)	592
TaiI	ACGT	1 cut(s)	1075
TaqI	TCGA	3 cut(s)	394, 1003, 1122
TasI	AATT	3 cut(s)	716, 769, 1104
TatI	WGTACW	1 cut(s)	1133
TauI	GCSGC	1 cut(s)	599
TfiI	GAWTC	1 cut(s)	896
Tru1I	TTAA	2 cut(s)	965, 987
Tru9I	TTAA	2 cut(s)	965, 987
TscAI	CASTG	1 cut(s)	595
TseI	GCWGC	7 cut(s)	116, 176, 254, 338, 341, 695, 1231
TspDTI	ATGAA	6 cut(s)	30, 86, 762, 867, 954, 1115
TspGWI	ACGGA	1 cut(s)	77
TspRI	CASTG	1 cut(s)	595
Van91I	CCANNNNNTGG	1 cut(s)	239
Vha464I	CTTAAG	1 cut(s)	986
VpaK11BI	GGWCC	1 cut(s)	137
XapI	RAATTY	1 cut(s)	769
XceI	RCATGY	1 cut(s)	1207
XspI	CTAG	7 cut(s)	519, 792, 801, 903, 1179, 1278, 1282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.