mitogen-activated protein kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53510 AT3G14720 AT3G14720 AT3G14720 |
| fragaria_vesca | FvH4_3g17440 FvH4_3g17440 FvH4_3g17440 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240 |
| malus_domestica | MD03G1251600.v1.1 MD09G1151800.v1.1 MD11G1272700.v1.1 MD17G1139400.v1.1 |
| prunus_persica | Prupe.3G172800_v2.0.a1 Prupe.3G172800_v2.0.a1 Prupe.4G154700_v2.0.a1 |
| pyrus_communis | pycom03g19900 |
| rosa_chinensis | RchiOBHm_Chr2g0151501 RchiOBHm_Chr5g0028971 |
| rosa_laevigata | RLG00000020555 RLG00000033132 |
| rosa_multiflora | Rmu_sc0000940.1_g000020 Rmu_sc0010209.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00050920 Rroxscaffold_2G00096400 |
| rosa_rugosa | Rorug02G0426600 Rorug05G0112100 |
| rosa_samantha | Rh2AG487400 Rh2BG499800 Rh2CG473800 Rh2DG511000 Rh5AG204100 Rh5BG202400 Rh5CG223200 Rh5DG206200 |
| rosa_wichuraiana | Rw2G039950 Rw5G018500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 240, 589 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 579 |
| AccI | GTMKAC | 2 cut(s) | 623, 1303 |
| AccII | CGCG | 1 cut(s) | 1742 |
| AciI | CCGC | 5 cut(s) | 278, 1601, 1737, 1740, 1742 |
| AclWI | GGATC | 4 cut(s) | 613, 851, 893, 932 |
| AcsI | RAATTY | 1 cut(s) | 1004 |
| AcuI | CTGAAG | 2 cut(s) | 1131, 1335 |
| AdeI | CACNNNGTG | 1 cut(s) | 1681 |
| AfaI | GTAC | 5 cut(s) | 584, 1169, 1392, 1503, 1576 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 579, 768, 961, 1417 |
| AflIII | ACRYGT | 1 cut(s) | 1306 |
| AgsI | TTSAA | 9 cut(s) | 86, 257, 418, 496, 802, 968, 1016, 1326, 1362 |
| AjiI | CACGTC | 1 cut(s) | 1307 |
| AjnI | CCWGG | 2 cut(s) | 694, 1405 |
| Alw21I | GWGCWC | 2 cut(s) | 324, 600 |
| Alw26I | GTCTC | 2 cut(s) | 193, 752 |
| AlwI | GGATC | 4 cut(s) | 613, 851, 893, 932 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1583 |
| AoxI | GGCC | 4 cut(s) | 911, 1196, 1376, 1408 |
| ApeKI | GCWGC | 6 cut(s) | 122, 654, 920, 1087, 1583, 1754 |
| ApoI | RAATTY | 1 cut(s) | 1004 |
| AseI | ATTAAT | 1 cut(s) | 168 |
| AspLEI | GCGC | 2 cut(s) | 931, 1569 |
| AspS9I | GGNCC | 3 cut(s) | 1196, 1376, 1724 |
| AsuHPI | GGTGA | 2 cut(s) | 71, 374 |
| AsuII | TTCGAA | 1 cut(s) | 995 |
| AvaII | GGWCC | 1 cut(s) | 1724 |
| BaeGI | GKGCMC | 1 cut(s) | 592 |
| BanI | GGYRCC | 2 cut(s) | 240, 589 |
| BanII | GRGCYC | 2 cut(s) | 324, 600 |
| BauI | CACGAG | 1 cut(s) | 372 |
| BbsI | GAAGAC | 1 cut(s) | 866 |
| Bbv12I | GWGCWC | 2 cut(s) | 324, 600 |
| BbvCI | CCTCAGC | 1 cut(s) | 666 |
| BbvI | GCAGC | 6 cut(s) | 134, 641, 907, 1074, 1570, 1766 |
| BccI | CCATC | 9 cut(s) | 31, 453, 573, 720, 994, 1086, 1148, 1351, 1402 |
| BceAI | ACGGC | 2 cut(s) | 245, 1395 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 507, 541 |
| BciT130I | CCWGG | 2 cut(s) | 696, 1407 |
| BcoDI | GTCTC | 2 cut(s) | 193, 752 |
| BfaI | CTAG | 3 cut(s) | 789, 1134, 1172 |
| BfmI | CTRYAG | 2 cut(s) | 921, 1242 |
| BfoI | RGCGCY | 1 cut(s) | 932 |
| BglII | AGATCT | 1 cut(s) | 334 |
| BisI | GCNGC | 8 cut(s) | 123, 655, 921, 1088, 1584, 1737, 1740, 1755 |
| BlpI | GCTNAGC | 2 cut(s) | 1641, 1695 |
| BlsI | GCNGC | 8 cut(s) | 124, 656, 922, 1089, 1585, 1738, 1741, 1756 |
| BmcAI | AGTACT | 1 cut(s) | 1503 |
| Bme1390I | CCNGG | 2 cut(s) | 696, 1407 |
| Bme18I | GGWCC | 1 cut(s) | 1724 |
| BmgBI | CACGTC | 1 cut(s) | 1307 |
| BmgT120I | GGNCC | 3 cut(s) | 1196, 1376, 1724 |
| BmiI | GGNNCC | 4 cut(s) | 242, 591, 1341, 1735 |
| BmrFI | CCNGG | 2 cut(s) | 696, 1407 |
| BmrI | ACTGGG | 1 cut(s) | 1275 |
| BmsI | GCATC | 9 cut(s) | 52, 184, 388, 393, 666, 1301, 1462, 1595, 1681 |
| BmuI | ACTGGG | 1 cut(s) | 1275 |
| BpiI | GAAGAC | 1 cut(s) | 866 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 173, 205 |
| BpmI | CTGGAG | 3 cut(s) | 612, 1194, 1752 |
| Bpu10I | CCTNAGC | 3 cut(s) | 594, 666, 960 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1641, 1695 |
| Bpu14I | TTCGAA | 1 cut(s) | 995 |
| BpuEI | CTTGAG | 2 cut(s) | 1076, 1102 |
| BsaBI | GATNNNNATC | 2 cut(s) | 66, 339 |
| BsaI | GGTCTC | 1 cut(s) | 752 |
| BsaJI | CCNNGG | 1 cut(s) | 1740 |
| BsaWI | WCCGGW | 1 cut(s) | 1761 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 135, 165, 1507, 1537 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 579, 768, 961, 1417 |
| Bse1I | ACTGG | 6 cut(s) | 385, 477, 1074, 1199, 1254, 1281 |
| Bse3DI | GCAATG | 2 cut(s) | 762, 866 |
| Bse8I | GATNNNNATC | 2 cut(s) | 66, 339 |
| BseBI | CCWGG | 2 cut(s) | 696, 1407 |
| BseDI | CCNNGG | 1 cut(s) | 1740 |
| BseGI | GGATG | 2 cut(s) | 1042, 1078 |
| BseJI | GATNNNNATC | 2 cut(s) | 66, 339 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 579, 768, 961, 1417 |
| BseMI | GCAATG | 2 cut(s) | 762, 866 |
| BseMII | CTCAG | 6 cut(s) | 26, 42, 585, 657, 1604, 1632 |
| BseNI | ACTGG | 6 cut(s) | 385, 477, 1074, 1199, 1254, 1281 |
| BseSI | GKGCMC | 1 cut(s) | 592 |
| BseXI | GCAGC | 6 cut(s) | 134, 641, 907, 1074, 1570, 1766 |
| BseYI | CCCAGC | 1 cut(s) | 767 |
| BsgI | GTGCAG | 2 cut(s) | 141, 1278 |
| Bsh1236I | CGCG | 1 cut(s) | 1742 |
| BshFI | GGCC | 4 cut(s) | 913, 1198, 1378, 1410 |
| BshNI | GGYRCC | 2 cut(s) | 240, 589 |
| BsiHKAI | GWGCWC | 2 cut(s) | 324, 600 |
| BsiSI | CCGG | 1 cut(s) | 1762 |
| BslFI | GGGAC | 2 cut(s) | 812, 1595 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 579, 768, 961, 1417 |
| BsmAI | GTCTC | 2 cut(s) | 193, 752 |
| BsmFI | GGGAC | 2 cut(s) | 812, 1595 |
| BsnI | GGCC | 4 cut(s) | 913, 1198, 1378, 1410 |
| Bso31I | GGTCTC | 1 cut(s) | 752 |
| Bsp119I | TTCGAA | 1 cut(s) | 995 |
| Bsp1286I | GDGCHC | 3 cut(s) | 324, 592, 600 |
| Bsp143I | GATC | 8 cut(s) | 334, 451, 605, 733, 856, 898, 937, 1238 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1641, 1695 |
| BspACI | CCGC | 5 cut(s) | 278, 1601, 1737, 1740, 1742 |
| BspANI | GGCC | 4 cut(s) | 913, 1198, 1378, 1410 |
| BspCNI | CTCAG | 6 cut(s) | 25, 43, 586, 658, 1603, 1633 |
| BspFNI | CGCG | 1 cut(s) | 1742 |
| BspLI | GGNNCC | 4 cut(s) | 242, 591, 1341, 1735 |
| BspMAI | CTGCAG | 2 cut(s) | 925, 1246 |
| BspPI | GGATC | 4 cut(s) | 613, 851, 893, 932 |
| BspQI | GCTCTTC | 1 cut(s) | 204 |
| BspT104I | TTCGAA | 1 cut(s) | 995 |
| BspT107I | GGYRCC | 2 cut(s) | 240, 589 |
| BspTNI | GGTCTC | 1 cut(s) | 752 |
| BsrDI | GCAATG | 2 cut(s) | 762, 866 |
| BsrI | ACTGG | 6 cut(s) | 385, 477, 1074, 1199, 1254, 1281 |
| BssECI | CCNNGG | 1 cut(s) | 1740 |
| BssMI | GATC | 8 cut(s) | 334, 451, 605, 733, 856, 898, 937, 1238 |
| BssNAI | GTATAC | 1 cut(s) | 624 |
| BssSI | CACGAG | 1 cut(s) | 372 |
| Bst1107I | GTATAC | 1 cut(s) | 624 |
| Bst2BI | CACGAG | 1 cut(s) | 372 |
| Bst2UI | CCWGG | 2 cut(s) | 696, 1407 |
| Bst4CI | ACNGT | 6 cut(s) | 550, 888, 1301, 1501, 1519, 1532 |
| Bst6I | CTCTTC | 1 cut(s) | 204 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 654 |
| BstBI | TTCGAA | 1 cut(s) | 995 |
| BstC8I | GCNNGC | 3 cut(s) | 933, 1224, 1707 |
| BstDSI | CCRYGG | 1 cut(s) | 1740 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 959 |
| BstF5I | GGATG | 2 cut(s) | 1042, 1078 |
| BstFNI | CGCG | 1 cut(s) | 1742 |
| BstH2I | RGCGCY | 1 cut(s) | 932 |
| BstHHI | GCGC | 2 cut(s) | 931, 1569 |
| BstKTI | GATC | 8 cut(s) | 337, 454, 608, 736, 859, 901, 940, 1241 |
| BstMAI | GTCTC | 2 cut(s) | 193, 752 |
| BstMBI | GATC | 8 cut(s) | 334, 451, 605, 733, 856, 898, 937, 1238 |
| BstNI | CCWGG | 2 cut(s) | 696, 1407 |
| BstNSI | RCATGY | 4 cut(s) | 188, 1226, 1709, 1792 |
| BstSCI | CCNGG | 2 cut(s) | 694, 1405 |
| BstSFI | CTRYAG | 2 cut(s) | 921, 1242 |
| BstSLI | GKGCMC | 1 cut(s) | 592 |
| BstUI | CGCG | 1 cut(s) | 1742 |
| BstV1I | GCAGC | 6 cut(s) | 134, 641, 907, 1074, 1570, 1766 |
| BstV2I | GAAGAC | 1 cut(s) | 866 |
| BstX2I | RGATCY | 2 cut(s) | 334, 856 |
| BstYI | RGATCY | 2 cut(s) | 334, 856 |
| BstZ17I | GTATAC | 1 cut(s) | 624 |
| BsuRI | GGCC | 4 cut(s) | 913, 1198, 1378, 1410 |
| BtgI | CCRYGG | 1 cut(s) | 1740 |
| BtrI | CACGTC | 1 cut(s) | 1307 |
| BtsCI | GGATG | 2 cut(s) | 1042, 1078 |
| BtsI | GCAGTG | 1 cut(s) | 1576 |
| BtsIMutI | CAGTG | 3 cut(s) | 48, 1261, 1576 |
| Cac8I | GCNNGC | 3 cut(s) | 933, 1224, 1707 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1583 |
| CfoI | GCGC | 2 cut(s) | 931, 1569 |
| Cfr13I | GGNCC | 3 cut(s) | 1196, 1376, 1724 |
| Cfr42I | CCGCGG | 1 cut(s) | 1743 |
| CseI | GACGC | 1 cut(s) | 860 |
| Csp6I | GTAC | 5 cut(s) | 583, 1168, 1391, 1502, 1575 |
| CviAII | CATG | 8 cut(s) | 28, 185, 271, 325, 1223, 1552, 1706, 1789 |
| CviQI | GTAC | 5 cut(s) | 583, 1168, 1391, 1502, 1575 |
| DpnI | GATC | 8 cut(s) | 336, 453, 607, 735, 858, 900, 939, 1240 |
| DpnII | GATC | 8 cut(s) | 334, 451, 605, 733, 856, 898, 937, 1238 |
| DraI | TTTAAA | 2 cut(s) | 298, 1287 |
| DraIII | CACNNNGTG | 1 cut(s) | 1681 |
| Eam1104I | CTCTTC | 1 cut(s) | 204 |
| EarI | CTCTTC | 1 cut(s) | 204 |
| EciI | GGCGGA | 1 cut(s) | 267 |
| Ecl136II | GAGCTC | 2 cut(s) | 322, 598 |
| Eco24I | GRGCYC | 2 cut(s) | 324, 600 |
| Eco31I | GGTCTC | 1 cut(s) | 752 |
| Eco47I | GGWCC | 1 cut(s) | 1724 |
| Eco53kI | GAGCTC | 2 cut(s) | 322, 598 |
| Eco57I | CTGAAG | 2 cut(s) | 1131, 1335 |
| EcoICRI | GAGCTC | 2 cut(s) | 322, 598 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 959 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1376 |
| EcoRII | CCWGG | 2 cut(s) | 694, 1405 |
| EcoT22I | ATGCAT | 1 cut(s) | 429 |
| EcoT38I | GRGCYC | 2 cut(s) | 324, 600 |
| FaeI | CATG | 8 cut(s) | 31, 188, 274, 328, 1226, 1555, 1709, 1792 |
| FaqI | GGGAC | 2 cut(s) | 812, 1595 |
| FatI | CATG | 8 cut(s) | 27, 184, 270, 324, 1222, 1551, 1705, 1788 |
| FblI | GTMKAC | 2 cut(s) | 623, 1303 |
| Fnu4HI | GCNGC | 8 cut(s) | 123, 655, 921, 1088, 1584, 1737, 1740, 1755 |
| FokI | GGATG | 2 cut(s) | 1049, 1065 |
| FriOI | GRGCYC | 2 cut(s) | 324, 600 |
| Fsp4HI | GCNGC | 8 cut(s) | 123, 655, 921, 1088, 1584, 1737, 1740, 1755 |
| FspBI | CTAG | 3 cut(s) | 789, 1134, 1172 |
| GlaI | GCGC | 2 cut(s) | 930, 1568 |
| GluI | GCNGC | 8 cut(s) | 123, 655, 921, 1088, 1584, 1737, 1740, 1755 |
| GsaI | CCCAGC | 1 cut(s) | 771 |
| GsuI | CTGGAG | 3 cut(s) | 612, 1194, 1752 |
| HaeII | RGCGCY | 1 cut(s) | 932 |
| HaeIII | GGCC | 4 cut(s) | 913, 1198, 1378, 1410 |
| HapII | CCGG | 1 cut(s) | 1762 |
| HgaI | GACGC | 1 cut(s) | 860 |
| HhaI | GCGC | 2 cut(s) | 931, 1569 |
| Hin1II | CATG | 8 cut(s) | 31, 188, 274, 328, 1226, 1555, 1709, 1792 |
| Hin6I | GCGC | 2 cut(s) | 929, 1567 |
| HinP1I | GCGC | 2 cut(s) | 929, 1567 |
| HincII | GTYRAC | 2 cut(s) | 1029, 1304 |
| HindII | GTYRAC | 2 cut(s) | 1029, 1304 |
| HindIII | AAGCTT | 1 cut(s) | 221 |
| HinfI | GANTC | 6 cut(s) | 79, 329, 370, 1421, 1460, 1555 |
| HpaII | CCGG | 1 cut(s) | 1762 |
| HphI | GGTGA | 2 cut(s) | 71, 374 |
| Hpy166II | GTNNAC | 6 cut(s) | 442, 624, 1029, 1264, 1304, 1403 |
| Hpy188I | TCNGA | 7 cut(s) | 78, 193, 334, 402, 757, 1111, 1297 |
| Hpy188III | TCNNGA | 7 cut(s) | 14, 83, 374, 449, 1211, 1326, 1559 |
| Hpy8I | GTNNAC | 6 cut(s) | 442, 624, 1029, 1264, 1304, 1403 |
| Hpy99I | CGWCG | 1 cut(s) | 1308 |
| HpyAV | CCTTC | 5 cut(s) | 291, 1017, 1106, 1332, 1550 |
| HpyCH4III | ACNGT | 6 cut(s) | 550, 888, 1301, 1501, 1519, 1532 |
| HpyCH4IV | ACGT | 1 cut(s) | 1306 |
| HpySE526I | ACGT | 1 cut(s) | 1306 |
| Hsp92II | CATG | 8 cut(s) | 31, 188, 274, 328, 1226, 1555, 1709, 1792 |
| HspAI | GCGC | 2 cut(s) | 929, 1567 |
| KspI | CCGCGG | 1 cut(s) | 1743 |
| Kzo9I | GATC | 8 cut(s) | 334, 451, 605, 733, 856, 898, 937, 1238 |
| LguI | GCTCTTC | 1 cut(s) | 204 |
| LmnI | GCTCC | 3 cut(s) | 645, 1733, 1772 |
| Lsp1109I | GCAGC | 6 cut(s) | 134, 641, 907, 1074, 1570, 1766 |
| LweI | GCATC | 9 cut(s) | 52, 184, 388, 393, 666, 1301, 1462, 1595, 1681 |
| MaeI | CTAG | 3 cut(s) | 789, 1134, 1172 |
| MaeII | ACGT | 1 cut(s) | 1306 |
| MaeIII | GTNAC | 3 cut(s) | 503, 1429, 1532 |
| MalI | GATC | 8 cut(s) | 336, 453, 607, 735, 858, 900, 939, 1240 |
| MboI | GATC | 8 cut(s) | 334, 451, 605, 733, 856, 898, 937, 1238 |
| MfeI | CAATTG | 1 cut(s) | 633 |
| MflI | RGATCY | 2 cut(s) | 334, 856 |
| MhlI | GDGCHC | 3 cut(s) | 324, 592, 600 |
| MluCI | AATT | 3 cut(s) | 633, 1004, 1160 |
| MlyI | GAGTC | 2 cut(s) | 364, 1469 |
| MmeI | TCCRAC | 1 cut(s) | 1293 |
| Mph1103I | ATGCAT | 1 cut(s) | 429 |
| MseI | TTAA | 9 cut(s) | 159, 168, 219, 297, 456, 531, 674, 948, 1286 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1254 |
| MspA1I | CMGCKG | 3 cut(s) | 1087, 1640, 1742 |
| MspI | CCGG | 1 cut(s) | 1762 |
| MspR9I | CCNGG | 2 cut(s) | 696, 1407 |
| MssI | GTTTAAAC | 1 cut(s) | 1287 |
| MunI | CAATTG | 1 cut(s) | 633 |
| MvaI | CCWGG | 2 cut(s) | 696, 1407 |
| MvnI | CGCG | 1 cut(s) | 1742 |
| NdeII | GATC | 8 cut(s) | 334, 451, 605, 733, 856, 898, 937, 1238 |
| NlaIII | CATG | 8 cut(s) | 31, 188, 274, 328, 1226, 1555, 1709, 1792 |
| NlaIV | GGNNCC | 4 cut(s) | 242, 591, 1341, 1735 |
| NmuCI | GTSAC | 1 cut(s) | 503 |
| NsiI | ATGCAT | 1 cut(s) | 429 |
| NspI | RCATGY | 4 cut(s) | 188, 1226, 1709, 1792 |
| NspV | TTCGAA | 1 cut(s) | 995 |
| PaeI | GCATGC | 2 cut(s) | 1226, 1709 |
| PciSI | GCTCTTC | 1 cut(s) | 204 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 208 |
| PfeI | GAWTC | 4 cut(s) | 79, 329, 1421, 1555 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 579 |
| PfoI | TCCNGGA | 1 cut(s) | 694 |
| PkrI | GCNGC | 8 cut(s) | 124, 656, 922, 1089, 1585, 1738, 1741, 1756 |
| PleI | GAGTC | 2 cut(s) | 364, 1468 |
| PmeI | GTTTAAAC | 1 cut(s) | 1287 |
| PpsI | GAGTC | 2 cut(s) | 364, 1468 |
| PshBI | ATTAAT | 1 cut(s) | 168 |
| Psp124BI | GAGCTC | 2 cut(s) | 324, 600 |
| Psp6I | CCWGG | 2 cut(s) | 694, 1405 |
| PspFI | CCCAGC | 1 cut(s) | 767 |
| PspGI | CCWGG | 2 cut(s) | 694, 1405 |
| PspN4I | GGNNCC | 4 cut(s) | 242, 591, 1341, 1735 |
| PspPI | GGNCC | 3 cut(s) | 1196, 1376, 1724 |
| PstI | CTGCAG | 2 cut(s) | 925, 1246 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1583 |
| PsuI | RGATCY | 2 cut(s) | 334, 856 |
| PvuII | CAGCTG | 2 cut(s) | 1087, 1640 |
| RsaI | GTAC | 5 cut(s) | 584, 1169, 1392, 1503, 1576 |
| RsaNI | GTAC | 5 cut(s) | 583, 1168, 1391, 1502, 1575 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1254 |
| SacI | GAGCTC | 2 cut(s) | 324, 600 |
| SacII | CCGCGG | 1 cut(s) | 1743 |
| SalI | GTCGAC | 1 cut(s) | 1302 |
| SapI | GCTCTTC | 1 cut(s) | 204 |
| SaqAI | TTAA | 9 cut(s) | 159, 168, 219, 297, 456, 531, 674, 948, 1286 |
| SatI | GCNGC | 8 cut(s) | 123, 655, 921, 1088, 1584, 1737, 1740, 1755 |
| Sau3AI | GATC | 8 cut(s) | 334, 451, 605, 733, 856, 898, 937, 1238 |
| Sau96I | GGNCC | 3 cut(s) | 1196, 1376, 1724 |
| ScaI | AGTACT | 1 cut(s) | 1503 |
| SchI | GAGTC | 2 cut(s) | 364, 1469 |
| ScrFI | CCNGG | 2 cut(s) | 696, 1407 |
| SduI | GDGCHC | 3 cut(s) | 324, 592, 600 |
| SfaNI | GCATC | 9 cut(s) | 52, 184, 388, 393, 666, 1301, 1462, 1595, 1681 |
| SfcI | CTRYAG | 2 cut(s) | 921, 1242 |
| Sfr303I | CCGCGG | 1 cut(s) | 1743 |
| SfuI | TTCGAA | 1 cut(s) | 995 |
| SgrBI | CCGCGG | 1 cut(s) | 1743 |
| SinI | GGWCC | 1 cut(s) | 1724 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1254 |
| SmlI | CTYRAG | 2 cut(s) | 1091, 1117 |
| SmoI | CTYRAG | 2 cut(s) | 1091, 1117 |
| SphI | GCATGC | 2 cut(s) | 1226, 1709 |
| Sse9I | AATT | 3 cut(s) | 633, 1004, 1160 |
| SsiI | CCGC | 5 cut(s) | 278, 1601, 1737, 1740, 1742 |
| SspI | AATATT | 1 cut(s) | 797 |
| SspMI | CTAG | 3 cut(s) | 789, 1134, 1172 |
| SstI | GAGCTC | 2 cut(s) | 324, 600 |
| StyD4I | CCNGG | 2 cut(s) | 694, 1405 |
| TaaI | ACNGT | 6 cut(s) | 550, 888, 1301, 1501, 1519, 1532 |
| TaiI | ACGT | 1 cut(s) | 1309 |
| TaqI | TCGA | 3 cut(s) | 995, 1303, 1317 |
| TaqII | GACCGA | 1 cut(s) | 1133 |
| TasI | AATT | 3 cut(s) | 633, 1004, 1160 |
| TatI | WGTACW | 1 cut(s) | 1501 |
| TauI | GCSGC | 2 cut(s) | 1739, 1742 |
| TfiI | GAWTC | 4 cut(s) | 79, 329, 1421, 1555 |
| Tru1I | TTAA | 9 cut(s) | 159, 168, 219, 297, 456, 531, 674, 948, 1286 |
| Tru9I | TTAA | 9 cut(s) | 159, 168, 219, 297, 456, 531, 674, 948, 1286 |
| TscAI | CASTG | 3 cut(s) | 55, 1261, 1576 |
| TseFI | GTSAC | 1 cut(s) | 503 |
| TseI | GCWGC | 6 cut(s) | 122, 654, 920, 1087, 1583, 1754 |
| Tsp45I | GTSAC | 1 cut(s) | 503 |
| TspDTI | ATGAA | 7 cut(s) | 44, 329, 795, 1118, 1238, 1452, 1568 |
| TspGWI | ACGGA | 2 cut(s) | 200, 575 |
| TspRI | CASTG | 3 cut(s) | 55, 1261, 1576 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 579 |
| VpaK11BI | GGWCC | 1 cut(s) | 1724 |
| VspI | ATTAAT | 1 cut(s) | 168 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 959 |
| XapI | RAATTY | 1 cut(s) | 1004 |
| XceI | RCATGY | 4 cut(s) | 188, 1226, 1709, 1792 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 469 |
| XmiI | GTMKAC | 2 cut(s) | 623, 1303 |
| XspI | CTAG | 3 cut(s) | 789, 1134, 1172 |
| ZrmI | AGTACT | 1 cut(s) | 1503 |
| Zsp2I | ATGCAT | 1 cut(s) | 429 |