Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002563

Physical Location & Seq

Genomic Coordinates Forward (+)

17653438 .. 17659221

Gene Structure 5784 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00096400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGATAATGTCGTCACGATGTGATTGGGATTTTGGGGTTGGAGTTGGAATTGGAGGTCTTGAAGTGCATGAGGGATTTGGTTTTCTGGGTTCCATGCTGGGTCAGGGATTTGGGTTTGAGAATAAGGTGGGATTCTGGGCTTTTGATCAGGAGCAGAGTTTTTCGAGATTTTGGAGTTCTGGGTTTGGCACAATAATGCAGCAGGATCACAGCAAGAAGGTGTTTGTTTTCCTGAATTCAACAGAGATGGAGTTCTTCTCTGATTATGGTGATGCCAATCGATACAAAATTCAGGAAGTTATTGGAAAAGGAAGCTATGGTGTTCTTCTCAGGCTTCTACGACATCCTGACATTGTGGAAATTAAACACATTATGCTGCCACCTTCTAGAAGAGACTTTAAAGATATATATGTTGTTTTTGAGCTCATGGAATCAGATCTTCATCAAGTTATCAAAGCTAATGATGATCTGACACGAGAGCACTATCAGTTCTTTCTTTATCAACTGCTTCGTGCACTGAAGTATATTCACACTGCAAATGTCTACCATCGTGATCTGAAACCAAAGAACATATTGGCAAATGCAAATTGCAAGCTAAAAATTTGTGATTTTGGGTTAGCGAGAGTTGCATTCAATGATACACCTACAACAATATTTTGGACGGACTATGTTGCAACTAGATGGTATAGAGCTCCAGAGCTTTGTGGATCATTTTTCTCTAAGTATACACCTGCCATTGATATATGGAGTATAGGCTGCATCTTTGCTGAAGTATTAACTGGAAAGCCCCTCTTTCCTGGAAAGAATGTTGTTCACCAGCTGGATTTGATGACTGATCTGCTTGGAACACCCTCATTGGATACCATATCTCGGGTTCGAAACGATAAGGCAAGGAGATACCTAACAAGTATGAGAAAAAAGCAACCTGTGTTGTTTGCACAGAAATTTCCAAATGCTGATCCTTTAGCACTACGACTTTTGCAAAGATTGCTTGCCTTCGATCCTAAGGACCGACCAACTGCCGAAGAGGCACTGGCTGATCCTTATTTTAAGGGACTCTCAAAAATAGAGAGGGAGCCTTCATGCCAGCCAATTACGAAGATGGAGTTTGAATTTGAGAGGCGAAGGGTCACAAAGGAGGATATACGGGAGCTAATTTTTCGGGAAATATTGGAGTACCATCCTCAATTGCTTAAAGACTACATAAATGGAACCGAAAGGACTAATTTTCTCTATCCAAGTGCTGTTGATCAATTCCGGAAGCAGTTTGCACATCTTGAGGAAAATAGTGGTAAAAGTGCCCCAGTTATTCCACTTGAACGAAAGCATGTATCTCTTCCTAGGTCTACAATTGTACATTCAAATACGGTTCCCCCTAAGGAACAACAAAATTATGCATACTTGAAAGATCAGAAACACGCTGAGGAGGCATACAAGAATTCAAGGGATACAGAAGGAATACATGTAAATCTATCACGAACCATGCAAGCACCACAAAGAATTCCCTTAGCTAAACCCGGTAGAGTTGTTGGGCCTGTTGTACCATATGAGAATGGAAATATCGTCAAAGATGCTTATGACCGAAGGACACTTATTAGAAGTACAGTACTGCCCCTCAGGCTGTTCCTCCATCTTATTGCTATCGGAAACCCAGTGGTGGAAGTCAAGAAAGTCAACAAGGTGGAACATGATGACCGAATTGCTATCGACACAAACTTCTTGCAGTCAAAGGTTCCATATGGTGGGATTGGTTCTGCTGCTGCCACTGCAGCTGCCCACCGCAAGGTTGGAACTGTTCAGTTTGGCATGTCAAGGATGTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

607

Amino Acids

69.62

Weight (kDa)

9.13

Isoelectric Point (pI)

36.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	109 - 350	8.3e-51	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	109 - 268	4.9e-22	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002563)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53510 AT3G14720 AT3G14720 AT3G14720
fragaria_vesca	FvH4_3g17440 FvH4_3g17440 FvH4_3g17440 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240
malus_domestica	MD03G1251600.v1.1 MD09G1151800.v1.1 MD11G1272700.v1.1 MD17G1139400.v1.1
prunus_persica	Prupe.3G172800_v2.0.a1 Prupe.3G172800_v2.0.a1 Prupe.4G154700_v2.0.a1
pyrus_communis	pycom03g19900
rosa_chinensis	RchiOBHm_Chr2g0151501 RchiOBHm_Chr5g0028971
rosa_laevigata	RLG00000020555 RLG00000033132
rosa_multiflora	Rmu_sc0000940.1_g000020 Rmu_sc0010209.1_g000001
rosa_roxburghii	Rroxscaffold_1G00050920 Rroxscaffold_2G00096400
rosa_rugosa	Rorug02G0426600 Rorug05G0112100
rosa_samantha	Rh2AG487400 Rh2BG499800 Rh2CG473800 Rh2DG511000 Rh5AG204100 Rh5BG202400 Rh5CG223200 Rh5DG206200
rosa_wichuraiana	Rw2G039950 Rw5G018500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	739
Acc36I	ACCTGC	1 cut(s)	739
AccB7I	CCANNNNNTGG	1 cut(s)	1742
AccI	GTMKAC	3 cut(s)	543, 725, 1346
AccIII	TCCGGA	1 cut(s)	1257
AciI	CCGC	1 cut(s)	1780
AclWI	GGATC	5 cut(s)	213, 715, 953, 995, 1034
AcsI	RAATTY	7 cut(s)	235, 288, 600, 944, 1112, 1438, 1500
AcuI	CTGAAG	2 cut(s)	539, 789
AdeI	CACNNNGTG	1 cut(s)	20
AfaI	GTAC	6 cut(s)	1178, 1356, 1542, 1603, 1608, 1820
AfiI	CCNNNNNNNGG	4 cut(s)	870, 1657, 1742, 1783
AflIII	ACRYGT	1 cut(s)	1462
AgsI	TTSAA	8 cut(s)	62, 240, 634, 1112, 1319, 1362, 1405, 1443
AjnI	CCWGG	1 cut(s)	796
Alw21I	GWGCWC	4 cut(s)	426, 483, 517, 694
Alw26I	GTCTC	1 cut(s)	387
Alw44I	GTGCAC	1 cut(s)	513
AlwI	GGATC	5 cut(s)	213, 715, 953, 995, 1034
Ama87I	CYCGRG	1 cut(s)	870
Aor13HI	TCCGGA	1 cut(s)	1257
AoxI	GGCC	1 cut(s)	1532
ApaLI	GTGCAC	1 cut(s)	513
ApeKI	GCWGC	7 cut(s)	199, 376, 756, 1757, 1760, 1769, 1772
ApoI	RAATTY	7 cut(s)	235, 288, 600, 944, 1112, 1438, 1500
AspA2I	CCTAGG	1 cut(s)	1340
AspS9I	GGNCC	2 cut(s)	1009, 1532
AsuC2I	CCSGG	1 cut(s)	1518
AsuHPI	GGTGA	2 cut(s)	281, 806
AsuII	TTCGAA	1 cut(s)	877
AvaI	CYCGRG	1 cut(s)	870
AvaII	GGWCC	1 cut(s)	1009
AvrII	CCTAGG	1 cut(s)	1340
AxyI	CCTNAGG	3 cut(s)	1005, 1377, 1616
BaeGI	GKGCMC	2 cut(s)	517, 1303
BanII	GRGCYC	2 cut(s)	426, 694
BauI	CACGAG	1 cut(s)	474
Bbv12I	GWGCWC	4 cut(s)	426, 483, 517, 694
BbvCI	CCTCAGC	1 cut(s)	1422
BbvI	GCAGC	7 cut(s)	211, 363, 743, 1744, 1747, 1759, 1781
BccI	CCATC	6 cut(s)	241, 555, 675, 1096, 1188, 1638
BciT130I	CCWGG	1 cut(s)	798
BciVI	GTATCC	2 cut(s)	853, 1441
BclI	TGATCA	2 cut(s)	145, 1249
BcnI	CCSGG	1 cut(s)	1518
BcoDI	GTCTC	1 cut(s)	387
BfaI	CTAG	4 cut(s)	387, 678, 1341, 1822
BfmI	CTRYAG	1 cut(s)	1767
BfuAI	ACCTGC	1 cut(s)	739
BfuI	GTATCC	2 cut(s)	853, 1441
BglI	GCCNNNNNGGC	2 cut(s)	1028, 1618
BglII	AGATCT	1 cut(s)	436
BisI	GCNGC	7 cut(s)	200, 377, 757, 1758, 1761, 1770, 1773
BlnI	CCTAGG	1 cut(s)	1340
BlsI	GCNGC	7 cut(s)	201, 378, 758, 1759, 1762, 1771, 1774
BmcAI	AGTACT	1 cut(s)	1608
Bme1390I	CCNGG	2 cut(s)	798, 1518
Bme18I	GGWCC	1 cut(s)	1009
BmeT110I	CYCGRG	1 cut(s)	870
BmgT120I	GGNCC	2 cut(s)	1009, 1532
BmiI	GGNNCC	5 cut(s)	91, 1077, 1213, 1371, 1734
BmrFI	CCNGG	2 cut(s)	798, 1518
BmrI	ACTGGG	2 cut(s)	1298, 1646
BmsI	GCATC	3 cut(s)	262, 768, 1561
BmuI	ACTGGG	2 cut(s)	1298, 1646
BplI	GAGNNNNNCTC	2 cut(s)	242, 274
BpmI	CTGGAG	1 cut(s)	678
Bpu10I	CCTNAGC	2 cut(s)	1422, 1507
Bpu14I	TTCGAA	1 cut(s)	877
BpuEI	CTTGAG	1 cut(s)	1298
BpuMI	CCSGG	1 cut(s)	1518
Bsa29I	ATCGAT	1 cut(s)	280
BsaBI	GATNNNNATC	2 cut(s)	276, 441
BsaJI	CCNNGG	1 cut(s)	1340
BsaWI	WCCGGW	1 cut(s)	1257
Bsc4I	CCNNNNNNNGG	4 cut(s)	870, 1657, 1742, 1783
Bse1I	ACTGG	4 cut(s)	784, 1038, 1304, 1652
Bse21I	CCTNAGG	3 cut(s)	1005, 1377, 1616
Bse8I	GATNNNNATC	2 cut(s)	276, 441
BseAI	TCCGGA	1 cut(s)	1257
BseBI	CCWGG	1 cut(s)	798
BseCI	ATCGAT	1 cut(s)	280
BseDI	CCNNGG	1 cut(s)	1340
BseGI	GGATG	3 cut(s)	343, 1180, 1821
BseJI	GATNNNNATC	2 cut(s)	276, 441
BseLI	CCNNNNNNNGG	4 cut(s)	870, 1657, 1742, 1783
BseMII	CTCAG	3 cut(s)	343, 1413, 1630
BseNI	ACTGG	4 cut(s)	784, 1038, 1304, 1652
BseRI	GAGGAG	1 cut(s)	1439
BseSI	GKGCMC	2 cut(s)	517, 1303
BseXI	GCAGC	7 cut(s)	211, 363, 743, 1744, 1747, 1759, 1781
BseYI	CCCAGC	1 cut(s)	97
BshFI	GGCC	1 cut(s)	1534
BshVI	ATCGAT	1 cut(s)	280
BsiHKAI	GWGCWC	4 cut(s)	426, 483, 517, 694
BsiHKCI	CYCGRG	1 cut(s)	870
BsiSI	CCGG	2 cut(s)	1258, 1518
BslFI	GGGAC	1 cut(s)	1068
BslI	CCNNNNNNNGG	4 cut(s)	870, 1657, 1742, 1783
BsmAI	GTCTC	1 cut(s)	387
BsmFI	GGGAC	1 cut(s)	1068
BsmI	GAATGC	1 cut(s)	629
BsnI	GGCC	1 cut(s)	1534
BsoBI	CYCGRG	1 cut(s)	870
Bsp119I	TTCGAA	1 cut(s)	877
Bsp1286I	GDGCHC	5 cut(s)	426, 483, 517, 694, 1303
Bsp13I	TCCGGA	1 cut(s)	1257
Bsp1407I	TGTACA	1 cut(s)	1354
BspACI	CCGC	1 cut(s)	1780
BspANI	GGCC	1 cut(s)	1534
BspCNI	CTCAG	3 cut(s)	342, 1414, 1629
BspDI	ATCGAT	1 cut(s)	280
BspEI	TCCGGA	1 cut(s)	1257
BspLI	GGNNCC	5 cut(s)	91, 1077, 1213, 1371, 1734
BspMAI	CTGCAG	1 cut(s)	1771
BspMI	ACCTGC	1 cut(s)	739
BspPI	GGATC	5 cut(s)	213, 715, 953, 995, 1034
BspT104I	TTCGAA	1 cut(s)	877
BsrGI	TGTACA	1 cut(s)	1354
BsrI	ACTGG	4 cut(s)	784, 1038, 1304, 1652
BssECI	CCNNGG	1 cut(s)	1340
BssNAI	GTATAC	1 cut(s)	726
BssSI	CACGAG	1 cut(s)	474
BssT1I	CCWWGG	1 cut(s)	1340
Bst1107I	GTATAC	1 cut(s)	726
Bst2BI	CACGAG	1 cut(s)	474
Bst2UI	CCWGG	1 cut(s)	798
Bst4CI	ACNGT	3 cut(s)	1369, 1606, 1795
Bst6I	CTCTTC	3 cut(s)	385, 1020, 1341
BstAPI	GCANNNNNTGC	1 cut(s)	988
BstAUI	TGTACA	1 cut(s)	1354
BstBI	TTCGAA	1 cut(s)	877
BstC8I	GCNNGC	4 cut(s)	593, 993, 1088, 1488
BstDEI	CTNAG	7 cut(s)	329, 720, 1005, 1377, 1422, 1507, 1616
BstF5I	GGATG	3 cut(s)	343, 1180, 1821
BstMAI	GTCTC	1 cut(s)	387
BstMWI	GCNNNNNNNGC	7 cut(s)	626, 988, 1028, 1427, 1618, 1766, 1769
BstNI	CCWGG	1 cut(s)	798
BstNSI	RCATGY	3 cut(s)	1331, 1466, 1810
BstSCI	CCNGG	2 cut(s)	796, 1516
BstSFI	CTRYAG	1 cut(s)	1767
BstSLI	GKGCMC	2 cut(s)	517, 1303
BstV1I	GCAGC	7 cut(s)	211, 363, 743, 1744, 1747, 1759, 1781
BstX2I	RGATCY	1 cut(s)	436
BstYI	RGATCY	1 cut(s)	436
BstZ17I	GTATAC	1 cut(s)	726
Bsu15I	ATCGAT	1 cut(s)	280
Bsu36I	CCTNAGG	3 cut(s)	1005, 1377, 1616
BsuI	GTATCC	2 cut(s)	853, 1441
BsuRI	GGCC	1 cut(s)	1534
BsuTUI	ATCGAT	1 cut(s)	280
BtsCI	GGATG	3 cut(s)	343, 1180, 1821
BtsI	GCAGTG	2 cut(s)	531, 1764
BtsIMutI	CAGTG	5 cut(s)	515, 531, 1031, 1659, 1764
BveI	ACCTGC	1 cut(s)	739
Cac8I	GCNNGC	4 cut(s)	593, 993, 1088, 1488
Cfr13I	GGNCC	2 cut(s)	1009, 1532
ClaI	ATCGAT	1 cut(s)	280
Csp6I	GTAC	6 cut(s)	1177, 1355, 1541, 1602, 1607, 1819
CviAII	CATG	9 cut(s)	68, 94, 427, 1083, 1328, 1463, 1483, 1688, 1807
CviQI	GTAC	6 cut(s)	1177, 1355, 1541, 1602, 1607, 1819
DdeI	CTNAG	7 cut(s)	329, 720, 1005, 1377, 1422, 1507, 1616
DraI	TTTAAA	1 cut(s)	400
DraIII	CACNNNGTG	1 cut(s)	20
Eam1104I	CTCTTC	3 cut(s)	385, 1020, 1341
EarI	CTCTTC	3 cut(s)	385, 1020, 1341
Ecl136II	GAGCTC	2 cut(s)	424, 692
Eco130I	CCWWGG	1 cut(s)	1340
Eco24I	GRGCYC	2 cut(s)	426, 694
Eco47I	GGWCC	1 cut(s)	1009
Eco53kI	GAGCTC	2 cut(s)	424, 692
Eco57I	CTGAAG	2 cut(s)	539, 789
Eco81I	CCTNAGG	3 cut(s)	1005, 1377, 1616
Eco88I	CYCGRG	1 cut(s)	870
EcoICRI	GAGCTC	2 cut(s)	424, 692
EcoRI	GAATTC	3 cut(s)	235, 1438, 1500
EcoRII	CCWGG	1 cut(s)	796
EcoT14I	CCWWGG	1 cut(s)	1340
EcoT22I	ATGCAT	1 cut(s)	1399
EcoT38I	GRGCYC	2 cut(s)	426, 694
ErhI	CCWWGG	1 cut(s)	1340
FaeI	CATG	9 cut(s)	71, 97, 430, 1086, 1331, 1466, 1486, 1691, 1810
FalI	AAGNNNNNCTT	2 cut(s)	776, 808
FaqI	GGGAC	1 cut(s)	1068
FatI	CATG	9 cut(s)	67, 93, 426, 1082, 1327, 1462, 1482, 1687, 1806
FauNDI	CATATG	2 cut(s)	1546, 1738
FbaI	TGATCA	2 cut(s)	145, 1249
FblI	GTMKAC	3 cut(s)	543, 725, 1346
Fnu4HI	GCNGC	7 cut(s)	200, 377, 757, 1758, 1761, 1770, 1773
FokI	GGATG	2 cut(s)	330, 1167
FriOI	GRGCYC	2 cut(s)	426, 694
Fsp4HI	GCNGC	7 cut(s)	200, 377, 757, 1758, 1761, 1770, 1773
FspBI	CTAG	4 cut(s)	387, 678, 1341, 1822
GluI	GCNGC	7 cut(s)	200, 377, 757, 1758, 1761, 1770, 1773
GsaI	CCCAGC	1 cut(s)	101
GsuI	CTGGAG	1 cut(s)	678
HaeIII	GGCC	1 cut(s)	1534
HapII	CCGG	2 cut(s)	1258, 1518
Hin1II	CATG	9 cut(s)	71, 97, 430, 1086, 1331, 1466, 1486, 1691, 1810
HincII	GTYRAC	1 cut(s)	1675
HindII	GTYRAC	1 cut(s)	1675
HinfI	GANTC	3 cut(s)	132, 431, 1056
HpaII	CCGG	2 cut(s)	1258, 1518
HphI	GGTGA	2 cut(s)	281, 806
Hpy166II	GTNNAC	6 cut(s)	515, 544, 726, 814, 1347, 1675
Hpy188I	TCNGA	6 cut(s)	262, 436, 471, 558, 1413, 1646
Hpy8I	GTNNAC	6 cut(s)	515, 544, 726, 814, 1347, 1675
HpyAV	CCTTC	7 cut(s)	211, 393, 1006, 1089, 1119, 1448, 1578
HpyCH4III	ACNGT	3 cut(s)	1369, 1606, 1795
HpyF10VI	GCNNNNNNNGC	7 cut(s)	626, 988, 1028, 1427, 1618, 1766, 1769
HpyF3I	CTNAG	7 cut(s)	329, 720, 1005, 1377, 1422, 1507, 1616
Hsp92II	CATG	9 cut(s)	71, 97, 430, 1086, 1331, 1466, 1486, 1691, 1810
Kpn2I	TCCGGA	1 cut(s)	1257
Ksp22I	TGATCA	2 cut(s)	145, 1249
LmnI	GCTCC	4 cut(s)	151, 697, 1075, 1150
Lsp1109I	GCAGC	7 cut(s)	211, 363, 743, 1744, 1747, 1759, 1781
LweI	GCATC	3 cut(s)	262, 768, 1561
MaeI	CTAG	4 cut(s)	387, 678, 1341, 1822
MaeIII	GTNAC	2 cut(s)	12, 1129
MboII	GAAGA	7 cut(s)	247, 317, 402, 431, 1037, 1111, 1328
MfeI	CAATTG	2 cut(s)	1187, 1350
MflI	RGATCY	1 cut(s)	436
MhlI	GDGCHC	5 cut(s)	426, 483, 517, 694, 1303
MlyI	GAGTC	1 cut(s)	1050
MmeI	TCCRAC	3 cut(s)	19, 25, 1768
Mph1103I	ATGCAT	1 cut(s)	1399
MroI	TCCGGA	1 cut(s)	1257
MseI	TTAA	5 cut(s)	363, 399, 776, 1050, 1194
MslI	CAYNNNNRTG	1 cut(s)	194
MspA1I	CMGCKG	2 cut(s)	820, 1772
MspI	CCGG	2 cut(s)	1258, 1518
MspR9I	CCNGG	2 cut(s)	798, 1518
MunI	CAATTG	2 cut(s)	1187, 1350
Mva1269I	GAATGC	1 cut(s)	629
MvaI	CCWGG	1 cut(s)	798
MwoI	GCNNNNNNNGC	7 cut(s)	626, 988, 1028, 1427, 1618, 1766, 1769
NciI	CCSGG	1 cut(s)	1518
NdeI	CATATG	2 cut(s)	1546, 1738
NlaIII	CATG	9 cut(s)	71, 97, 430, 1086, 1331, 1466, 1486, 1691, 1810
NlaIV	GGNNCC	5 cut(s)	91, 1077, 1213, 1371, 1734
NmuCI	GTSAC	2 cut(s)	12, 1129
NsiI	ATGCAT	1 cut(s)	1399
NspI	RCATGY	3 cut(s)	1331, 1466, 1810
NspV	TTCGAA	1 cut(s)	877
PaqCI	CACCTGC	1 cut(s)	739
PciI	ACATGT	1 cut(s)	1462
PctI	GAATGC	1 cut(s)	629
PfeI	GAWTC	2 cut(s)	132, 431
PflMI	CCANNNNNTGG	1 cut(s)	1742
PfoI	TCCNGGA	1 cut(s)	796
PkrI	GCNGC	7 cut(s)	201, 378, 758, 1759, 1762, 1771, 1774
PleI	GAGTC	1 cut(s)	1050
PpsI	GAGTC	1 cut(s)	1050
PscI	ACATGT	1 cut(s)	1462
Psp124BI	GAGCTC	2 cut(s)	426, 694
Psp6I	CCWGG	1 cut(s)	796
PspFI	CCCAGC	1 cut(s)	97
PspGI	CCWGG	1 cut(s)	796
PspN4I	GGNNCC	5 cut(s)	91, 1077, 1213, 1371, 1734
PspPI	GGNCC	2 cut(s)	1009, 1532
PstI	CTGCAG	1 cut(s)	1771
PsuI	RGATCY	1 cut(s)	436
PvuII	CAGCTG	2 cut(s)	820, 1772
RsaI	GTAC	6 cut(s)	1178, 1356, 1542, 1603, 1608, 1820
RsaNI	GTAC	6 cut(s)	1177, 1355, 1541, 1602, 1607, 1819
RseI	CAYNNNNRTG	1 cut(s)	194
SacI	GAGCTC	2 cut(s)	426, 694
SaqAI	TTAA	5 cut(s)	363, 399, 776, 1050, 1194
SatI	GCNGC	7 cut(s)	200, 377, 757, 1758, 1761, 1770, 1773
Sau96I	GGNCC	2 cut(s)	1009, 1532
ScaI	AGTACT	1 cut(s)	1608
SchI	GAGTC	1 cut(s)	1050
ScrFI	CCNGG	2 cut(s)	798, 1518
SduI	GDGCHC	5 cut(s)	426, 483, 517, 694, 1303
SfaNI	GCATC	3 cut(s)	262, 768, 1561
SfcI	CTRYAG	1 cut(s)	1767
SfuI	TTCGAA	1 cut(s)	877
SinI	GGWCC	1 cut(s)	1009
SmiMI	CAYNNNNRTG	1 cut(s)	194
SmlI	CTYRAG	1 cut(s)	1277
SmoI	CTYRAG	1 cut(s)	1277
SsiI	CCGC	1 cut(s)	1780
SspI	AATATT	2 cut(s)	654, 1170
SspMI	CTAG	4 cut(s)	387, 678, 1341, 1822
SstI	GAGCTC	2 cut(s)	426, 694
StyD4I	CCNGG	2 cut(s)	796, 1516
StyI	CCWWGG	1 cut(s)	1340
TaaI	ACNGT	3 cut(s)	1369, 1606, 1795
TaqI	TCGA	5 cut(s)	164, 280, 877, 999, 1707
TaqII	GACCGA	3 cut(s)	1026, 1596, 1710
TatI	WGTACW	4 cut(s)	1354, 1601, 1606, 1818
TfiI	GAWTC	2 cut(s)	132, 431
Tru1I	TTAA	5 cut(s)	363, 399, 776, 1050, 1194
Tru9I	TTAA	5 cut(s)	363, 399, 776, 1050, 1194
TscAI	CASTG	5 cut(s)	522, 538, 1038, 1659, 1771
TseFI	GTSAC	2 cut(s)	12, 1129
TseI	GCWGC	7 cut(s)	199, 376, 756, 1757, 1760, 1769, 1772
Tsp45I	GTSAC	2 cut(s)	12, 1129
TspDTI	ATGAA	2 cut(s)	431, 1071
TspGWI	ACGGA	1 cut(s)	677
TspRI	CASTG	5 cut(s)	522, 538, 1038, 1659, 1771
Van91I	CCANNNNNTGG	1 cut(s)	1742
VneI	GTGCAC	1 cut(s)	513
VpaK11BI	GGWCC	1 cut(s)	1009
XapI	RAATTY	7 cut(s)	235, 288, 600, 944, 1112, 1438, 1500
XbaI	TCTAGA	1 cut(s)	386
XceI	RCATGY	3 cut(s)	1331, 1466, 1810
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1784
XmaJI	CCTAGG	1 cut(s)	1340
XmiI	GTMKAC	3 cut(s)	543, 725, 1346
XspI	CTAG	4 cut(s)	387, 678, 1341, 1822
ZrmI	AGTACT	1 cut(s)	1608
Zsp2I	ATGCAT	1 cut(s)	1399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.