Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0002563

Physical Location & Seq

Genomic Coordinates Reverse (-)

38933605 .. 38938592

Gene Structure 4988 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1272700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGATGCGTCCTGGTCACCAAAACAAGGAGCTGAAAGAGATGGACTTTTTCACCGAATATGGTGAAGCTAATAGATATAAGATTCTTGAAGTCATAGGGAAAGGAAGTTATGGGGTTGTTTGTGCAGCTATTGACACACATACTGGGGAGAAAGTTGCGATAAAGAAAATACATAGTATCTTTGAGCACATCTCCGATGCTATTAGGATCTTGCGTGAAGTTAAGTTGCTTAGACTTTTAAGACATCCTGATATTGTCGAAATTAAGCGCATAATGTTGCCACCTTCAAAGAGGGAGTTCAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCTGATCTTCACCAAGTTATCAAGGCTAATGATGACTTGACCCGCGAACACCAGCAATTCTTTCTTTACCAGATGCTACGTGCTTTGAAATATATGCATACAGCCAATGTGTATCATAGAGATCTTAAGCCAAAAAATATACTGGCAAATGCAAATTGCAAGCTTAAAGTTTGTGATTTCGGACTAGCAAGAGTTGCCTTTAATGATACTCCAACAACAATATTTTGGACAGACTACGTGGCAACACGGTGGTATAGAGCTCCAGAACTATGTGGGTCATTCTTTTCCAAGTACACTCCTGCAATTGATATATGGAGTATTGGCTGCATCTTTGCGGAGGTATTGACAGGGAAGCCATTGTTTCCTGGTAAAAGTGTCATTCATCAATTAGATTTGATCACTGATCTCCTTGGAACACCTCCGCTAGAGACCATCTCTGGAGTTAGAAATGAGAAGGCAAGGAAATACTTGATGGAAATGCGGAGAAGACCTCCCGTGCCATTTACACAAAAATTTCCCAAGGCAGATCCTCTAGCACTCCGCCTATTACAAAGGCTATTGGCTTTTGACCCAAAGGACAGACCAACTGCCGAGCAGGCACTAGCTGATCCTTACTTCAAGGGCCTAGCCAAAGTTGAGAGAGAACACTCTTGTCAGCCTATTTCAAAGATGGAATTTGAATTTGAAAGGCGAAGGGTCATAAAAGAGGACATAAGAGAACTAATTTACCGGGAAATACTAGAATACCATCCTCAGCTACTTAAGGACTACATGAATGGAACTGAAGGCACAAGTTTTATGTATCCAAGTGCTATAGGCCAATTCAGAAAGCAGTTTGCTTATCTTGAGGAAAATGGTGGGAAAACTGGATCGGTTGTTCCTCCAGAGAGGAAGCATGTCTCCCTTCCACGATCCACCGTTCACTCGAGTACAATCCCCCCTAATGCACAGCCAAATTTGCTATCATATGAGAACCGGCAGACAGAGGAGGCTTCCAGCAGTTTTAGAGTAACAGACGCTTCTGGAAATGCACCAAAGGTTTCACGGCCGCCGCCGAGGGTGCCAACAGCAAAACCTGGGCGAGTTGTTGGACCAGTTCTTCCATATGAGAATGGCAGAAATGTGAAGGAAACCTATGATCCAAGGACATTCTCTAGAAACGCAGTTCCTCCTCAGTCTGTCACTCCACACTGCTTCAGAACTCATACTGCCAATCAAGACAAGGCTGGAGCGGAGATGCGGAGGGATGAATCACATGCTAAACTGCAACCCCAGCCCGAACAGCGCAACTTAGCAGGAAAACCTTCACCGGGCATGGCCATTGAAGTCAACATGAACCCATACTACCCACCACCCACCAAAGTAGATCAATTAAACTCGATAGATTCCAAATTACTGCAGGCGCAATCTCAGTTTGGTCCTGTAGGTGCTGCAGCCGTAGCTGTAGCTGCTCACCGGAACGCTGGAGCTGTTCAGTATGGATTGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

608

Amino Acids

68.95

Weight (kDa)

9.33

Isoelectric Point (pI)

41.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	26 - 317	1e-63	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	27 - 309	5.8e-31	Protein tyrosine and serine/threonine kinase
Kdo	PF06293	61 - 171	4.6e-06	Lipopolysaccharide kinase (Kdo/WaaP) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002563)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53510 AT3G14720 AT3G14720 AT3G14720
fragaria_vesca	FvH4_3g17440 FvH4_3g17440 FvH4_3g17440 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240
malus_domestica	MD03G1251600.v1.1 MD09G1151800.v1.1 MD11G1272700.v1.1 MD17G1139400.v1.1
prunus_persica	Prupe.3G172800_v2.0.a1 Prupe.3G172800_v2.0.a1 Prupe.4G154700_v2.0.a1
pyrus_communis	pycom03g19900
rosa_chinensis	RchiOBHm_Chr2g0151501 RchiOBHm_Chr5g0028971
rosa_laevigata	RLG00000020555 RLG00000033132
rosa_multiflora	Rmu_sc0000940.1_g000020 Rmu_sc0010209.1_g000001
rosa_roxburghii	Rroxscaffold_1G00050920 Rroxscaffold_2G00096400
rosa_rugosa	Rorug02G0426600 Rorug05G0112100
rosa_samantha	Rh2AG487400 Rh2BG499800 Rh2CG473800 Rh2DG511000 Rh5AG204100 Rh5BG202400 Rh5CG223200 Rh5DG206200
rosa_wichuraiana	Rw2G039950 Rw5G018500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1393
AccBSI	CCGCTC	1 cut(s)	1565
AccII	CGCG	1 cut(s)	378
AciI	CCGC	9 cut(s)	376, 668, 755, 814, 874, 1382, 1385, 1565, 1573
AclWI	GGATC	6 cut(s)	215, 854, 935, 1210, 1239, 1466
AcoI	YGGCCR	2 cut(s)	1379, 1650
AcsI	RAATTY	4 cut(s)	845, 1007, 1013, 1288
AcuI	CTGAAG	2 cut(s)	1137, 1513
AfaI	GTAC	2 cut(s)	626, 1264
AfiI	CCNNNNNNNGG	2 cut(s)	25, 1643
AflII	CTTAAG	2 cut(s)	458, 1094
AgsI	TTSAA	9 cut(s)	89, 288, 301, 421, 952, 999, 1013, 1019, 1658
AjnI	CCWGG	3 cut(s)	10, 697, 1408
AloI	GAACNNNNNNTCC	2 cut(s)	1194, 1226
Alw21I	GWGCWC	3 cut(s)	189, 327, 595
Alw26I	GTCTC	2 cut(s)	755, 1237
AlwI	GGATC	6 cut(s)	215, 854, 935, 1210, 1239, 1466
Ama87I	CYCGRG	1 cut(s)	1258
AoxI	GGCC	4 cut(s)	955, 1150, 1379, 1650
ApeKI	GCWGC	5 cut(s)	125, 657, 1763, 1766, 1781
ApoI	RAATTY	4 cut(s)	845, 1007, 1013, 1288
Asp700I	GAANNNNTTC	1 cut(s)	1636
AspLEI	GCGC	3 cut(s)	270, 1620, 1738
AspS9I	GGNCC	3 cut(s)	955, 1424, 1751
AsuC2I	CCSGG	2 cut(s)	1064, 1644
AsuHPI	GGTGA	6 cut(s)	8, 43, 74, 335, 1632, 1778
AvaI	CYCGRG	1 cut(s)	1258
AvaII	GGWCC	2 cut(s)	1424, 1751
BalI	TGGCCA	1 cut(s)	1652
BanI	GGYRCC	1 cut(s)	1393
BanII	GRGCYC	2 cut(s)	327, 595
BbsI	GAAGAC	1 cut(s)	826
Bbv12I	GWGCWC	3 cut(s)	189, 327, 595
BbvCI	CCTCAGC	1 cut(s)	1086
BbvI	GCAGC	5 cut(s)	137, 644, 1750, 1768, 1778
BccI	CCATC	5 cut(s)	34, 773, 799, 997, 1089
BceAI	ACGGC	2 cut(s)	1394, 1754
BciT130I	CCWGG	3 cut(s)	12, 699, 1410
BciVI	GTATCC	1 cut(s)	1146
BclI	TGATCA	1 cut(s)	729
BcnI	CCSGG	2 cut(s)	1064, 1644
BcoDI	GTCTC	2 cut(s)	755, 1237
BfaI	CTAG	7 cut(s)	518, 758, 866, 935, 959, 1073, 1488
BfmI	CTRYAG	5 cut(s)	1146, 1730, 1755, 1764, 1776
BfrI	CTTAAG	2 cut(s)	458, 1094
BfuI	GTATCC	1 cut(s)	1146
BglI	GCCNNNNNGGC	1 cut(s)	929
BglII	AGATCT	1 cut(s)	454
BisI	GCNGC	7 cut(s)	126, 658, 1382, 1385, 1764, 1767, 1782
BlsI	GCNGC	7 cut(s)	127, 659, 1383, 1386, 1765, 1768, 1783
Bme1390I	CCNGG	5 cut(s)	12, 699, 1064, 1410, 1644
Bme18I	GGWCC	2 cut(s)	1424, 1751
BmeT110I	CYCGRG	1 cut(s)	1258
BmgT120I	GGNCC	3 cut(s)	955, 1424, 1751
BmiI	GGNNCC	1 cut(s)	1395
BmrFI	CCNGG	5 cut(s)	12, 699, 1064, 1410, 1644
BmrI	ACTGGG	1 cut(s)	153
BmsI	GCATC	4 cut(s)	187, 396, 669, 1560
BmuI	ACTGGG	1 cut(s)	153
BpiI	GAAGAC	1 cut(s)	826
BplI	GAGNNNNNCTC	6 cut(s)	176, 208, 752, 784, 808, 840
BpmI	CTGGAG	5 cut(s)	579, 792, 1200, 1581, 1818
Bpu10I	CCTNAGC	1 cut(s)	1086
BpuEI	CTTGAG	1 cut(s)	1199
BpuMI	CCSGG	2 cut(s)	1064, 1644
BsaAI	YACGTR	2 cut(s)	413, 571
BsaI	GGTCTC	1 cut(s)	755
BsaJI	CCNNGG	5 cut(s)	742, 852, 1388, 1409, 1475
BsaWI	WCCGGW	1 cut(s)	1788
Bsc4I	CCNNNNNNNGG	2 cut(s)	25, 1643
Bse118I	RCCGGY	1 cut(s)	1308
Bse1I	ACTGG	4 cut(s)	148, 480, 1204, 1427
BseBI	CCWGG	3 cut(s)	12, 699, 1410
BseDI	CCNNGG	5 cut(s)	742, 852, 1388, 1409, 1475
BseGI	GGATG	3 cut(s)	244, 1081, 1585
BseLI	CCNNNNNNNGG	2 cut(s)	25, 1643
BseMII	CTCAG	3 cut(s)	1100, 1520, 1757
BseNI	ACTGG	4 cut(s)	148, 480, 1204, 1427
BseRI	GAGGAG	2 cut(s)	1334, 1494
BseX3I	CGGCCG	1 cut(s)	1379
BseXI	GCAGC	5 cut(s)	137, 644, 1750, 1768, 1778
BseYI	CCCAGC	1 cut(s)	1605
BsgI	GTGCAG	1 cut(s)	144
Bsh1236I	CGCG	1 cut(s)	378
Bsh1285I	CGRYCG	1 cut(s)	1382
BshFI	GGCC	4 cut(s)	957, 1152, 1381, 1652
BshNI	GGYRCC	1 cut(s)	1393
BsiEI	CGRYCG	1 cut(s)	1382
BsiHKAI	GWGCWC	3 cut(s)	189, 327, 595
BsiHKCI	CYCGRG	1 cut(s)	1258
BsiSI	CCGG	4 cut(s)	1063, 1309, 1643, 1789
BslI	CCNNNNNNNGG	2 cut(s)	25, 1643
BsmAI	GTCTC	2 cut(s)	755, 1237
BsnI	GGCC	4 cut(s)	957, 1152, 1381, 1652
Bso31I	GGTCTC	1 cut(s)	755
BsoBI	CYCGRG	1 cut(s)	1258
Bsp1286I	GDGCHC	3 cut(s)	189, 327, 595
BspACI	CCGC	9 cut(s)	376, 668, 755, 814, 874, 1382, 1385, 1565, 1573
BspANI	GGCC	4 cut(s)	957, 1152, 1381, 1652
BspCNI	CTCAG	3 cut(s)	1099, 1519, 1756
BspFNI	CGCG	1 cut(s)	378
BspLI	GGNNCC	1 cut(s)	1395
BspMAI	CTGCAG	2 cut(s)	1734, 1768
BspPI	GGATC	6 cut(s)	215, 854, 935, 1210, 1239, 1466
BspT107I	GGYRCC	1 cut(s)	1393
BspTI	CTTAAG	2 cut(s)	458, 1094
BspTNI	GGTCTC	1 cut(s)	755
BsrBI	CCGCTC	1 cut(s)	1565
BsrFI	RCCGGY	1 cut(s)	1308
BsrI	ACTGG	4 cut(s)	148, 480, 1204, 1427
BssAI	RCCGGY	1 cut(s)	1308
BssECI	CCNNGG	5 cut(s)	742, 852, 1388, 1409, 1475
BssT1I	CCWWGG	3 cut(s)	742, 852, 1475
Bst2UI	CCWGG	3 cut(s)	12, 699, 1410
Bst4CI	ACNGT	2 cut(s)	582, 1252
BstAFI	CTTAAG	2 cut(s)	458, 1094
BstAPI	GCANNNNNTGC	1 cut(s)	527
BstBAI	YACGTR	2 cut(s)	413, 571
BstC8I	GCNNGC	3 cut(s)	494, 930, 1734
BstDEI	CTNAG	5 cut(s)	230, 1086, 1506, 1624, 1743
BstEII	GGTNACC	1 cut(s)	14
BstF5I	GGATG	3 cut(s)	244, 1081, 1585
BstFNI	CGCG	1 cut(s)	378
BstHHI	GCGC	3 cut(s)	270, 1620, 1738
BstMAI	GTCTC	2 cut(s)	755, 1237
BstMCI	CGRYCG	1 cut(s)	1382
BstMWI	GCNNNNNNNGC	8 cut(s)	527, 929, 1291, 1393, 1606, 1615, 1772, 1781
BstNI	CCWGG	3 cut(s)	12, 699, 1410
BstNSI	RCATGY	2 cut(s)	1232, 1592
BstPI	GGTNACC	1 cut(s)	14
BstSCI	CCNGG	5 cut(s)	10, 697, 1062, 1408, 1642
BstSFI	CTRYAG	5 cut(s)	1146, 1730, 1755, 1764, 1776
BstUI	CGCG	1 cut(s)	378
BstV1I	GCAGC	5 cut(s)	137, 644, 1750, 1768, 1778
BstV2I	GAAGAC	1 cut(s)	826
BstX2I	RGATCY	3 cut(s)	207, 454, 859
BstYI	RGATCY	3 cut(s)	207, 454, 859
BstZI	CGGCCG	1 cut(s)	1379
BsuI	GTATCC	1 cut(s)	1146
BsuRI	GGCC	4 cut(s)	957, 1152, 1381, 1652
BtsCI	GGATG	3 cut(s)	244, 1081, 1585
BtsI	GCAGTG	1 cut(s)	1522
BtsIMutI	CAGTG	2 cut(s)	732, 1522
Cac8I	GCNNGC	3 cut(s)	494, 930, 1734
CfoI	GCGC	3 cut(s)	270, 1620, 1738
Cfr10I	RCCGGY	1 cut(s)	1308
Cfr13I	GGNCC	3 cut(s)	955, 1424, 1751
CseI	GACGC	1 cut(s)	1358
Csp6I	GTAC	2 cut(s)	625, 1263
CviAII	CATG	6 cut(s)	328, 1105, 1229, 1589, 1648, 1666
CviQI	GTAC	2 cut(s)	625, 1263
DdeI	CTNAG	5 cut(s)	230, 1086, 1506, 1624, 1743
EaeI	YGGCCR	2 cut(s)	1379, 1650
EagI	CGGCCG	1 cut(s)	1379
EciI	GGCGGA	1 cut(s)	863
Ecl136II	GAGCTC	2 cut(s)	325, 593
EclXI	CGGCCG	1 cut(s)	1379
Eco130I	CCWWGG	3 cut(s)	742, 852, 1475
Eco24I	GRGCYC	2 cut(s)	327, 595
Eco31I	GGTCTC	1 cut(s)	755
Eco47I	GGWCC	2 cut(s)	1424, 1751
Eco52I	CGGCCG	1 cut(s)	1379
Eco53kI	GAGCTC	2 cut(s)	325, 593
Eco57I	CTGAAG	2 cut(s)	1137, 1513
Eco88I	CYCGRG	1 cut(s)	1258
Eco91I	GGTNACC	1 cut(s)	14
EcoICRI	GAGCTC	2 cut(s)	325, 593
EcoO109I	RGGNCCY	1 cut(s)	955
EcoO65I	GGTNACC	1 cut(s)	14
EcoRII	CCWGG	3 cut(s)	10, 697, 1408
EcoT14I	CCWWGG	3 cut(s)	742, 852, 1475
EcoT22I	ATGCAT	1 cut(s)	432
EcoT38I	GRGCYC	2 cut(s)	327, 595
ErhI	CCWWGG	3 cut(s)	742, 852, 1475
FaeI	CATG	6 cut(s)	331, 1108, 1232, 1592, 1651, 1669
FatI	CATG	6 cut(s)	327, 1104, 1228, 1588, 1647, 1665
FauI	CCCGC	1 cut(s)	383
FauNDI	CATATG	2 cut(s)	1300, 1438
FbaI	TGATCA	1 cut(s)	729
Fnu4HI	GCNGC	7 cut(s)	126, 658, 1382, 1385, 1764, 1767, 1782
FokI	GGATG	3 cut(s)	231, 1068, 1592
FriOI	GRGCYC	2 cut(s)	327, 595
Fsp4HI	GCNGC	7 cut(s)	126, 658, 1382, 1385, 1764, 1767, 1782
FspBI	CTAG	7 cut(s)	518, 758, 866, 935, 959, 1073, 1488
GlaI	GCGC	3 cut(s)	269, 1619, 1737
GluI	GCNGC	7 cut(s)	126, 658, 1382, 1385, 1764, 1767, 1782
GsaI	CCCAGC	1 cut(s)	1609
GsuI	CTGGAG	5 cut(s)	579, 792, 1200, 1581, 1818
HaeIII	GGCC	4 cut(s)	957, 1152, 1381, 1652
HapII	CCGG	4 cut(s)	1063, 1309, 1643, 1789
HgaI	GACGC	1 cut(s)	1358
HhaI	GCGC	3 cut(s)	270, 1620, 1738
Hin1II	CATG	6 cut(s)	331, 1108, 1232, 1592, 1651, 1669
Hin6I	GCGC	3 cut(s)	268, 1618, 1736
HinP1I	GCGC	3 cut(s)	268, 1618, 1736
HincII	GTYRAC	1 cut(s)	1663
HindII	GTYRAC	1 cut(s)	1663
HindIII	AAGCTT	1 cut(s)	494
HinfI	GANTC	4 cut(s)	82, 332, 1583, 1718
HpaII	CCGG	4 cut(s)	1063, 1309, 1643, 1789
HphI	GGTGA	6 cut(s)	8, 43, 74, 335, 1632, 1778
Hpy166II	GTNNAC	3 cut(s)	627, 1255, 1663
Hpy188I	TCNGA	5 cut(s)	196, 337, 515, 1160, 1532
Hpy188III	TCNNGA	9 cut(s)	86, 248, 596, 771, 1178, 1217, 1356, 1488, 1550
Hpy8I	GTNNAC	3 cut(s)	627, 1255, 1663
HpyAV	CCTTC	7 cut(s)	294, 781, 1020, 1112, 1247, 1453, 1647
HpyCH4III	ACNGT	2 cut(s)	582, 1252
HpyCH4IV	ACGT	2 cut(s)	412, 570
HpyF10VI	GCNNNNNNNGC	8 cut(s)	527, 929, 1291, 1393, 1606, 1615, 1772, 1781
HpyF3I	CTNAG	5 cut(s)	230, 1086, 1506, 1624, 1743
HpySE526I	ACGT	2 cut(s)	412, 570
Hsp92II	CATG	6 cut(s)	331, 1108, 1232, 1592, 1651, 1669
HspAI	GCGC	3 cut(s)	268, 1618, 1736
Ksp22I	TGATCA	1 cut(s)	729
LmnI	GCTCC	4 cut(s)	28, 598, 1562, 1799
Lsp1109I	GCAGC	5 cut(s)	137, 644, 1750, 1768, 1778
LweI	GCATC	4 cut(s)	187, 396, 669, 1560
MaeI	CTAG	7 cut(s)	518, 758, 866, 935, 959, 1073, 1488
MaeII	ACGT	2 cut(s)	412, 570
MaeIII	GTNAC	3 cut(s)	14, 1342, 1513
MbiI	CCGCTC	1 cut(s)	1565
MboII	GAAGA	3 cut(s)	332, 831, 1424
MfeI	CAATTG	1 cut(s)	636
MflI	RGATCY	3 cut(s)	207, 454, 859
MhlI	GDGCHC	3 cut(s)	189, 327, 595
MlsI	TGGCCA	1 cut(s)	1652
MluNI	TGGCCA	1 cut(s)	1652
MlyI	GAGTC	1 cut(s)	341
MmeI	TCCRAC	2 cut(s)	569, 1402
Mox20I	TGGCCA	1 cut(s)	1652
Mph1103I	ATGCAT	1 cut(s)	432
MroXI	GAANNNNTTC	1 cut(s)	1636
MscI	TGGCCA	1 cut(s)	1652
MseI	TTAA	9 cut(s)	222, 239, 264, 459, 498, 534, 1095, 1706, 1822
Msp20I	TGGCCA	1 cut(s)	1652
MspCI	CTTAAG	2 cut(s)	458, 1094
MspI	CCGG	4 cut(s)	1063, 1309, 1643, 1789
MspR9I	CCNGG	5 cut(s)	12, 699, 1064, 1410, 1644
MunI	CAATTG	1 cut(s)	636
MvaI	CCWGG	3 cut(s)	12, 699, 1410
MvnI	CGCG	1 cut(s)	378
MwoI	GCNNNNNNNGC	8 cut(s)	527, 929, 1291, 1393, 1606, 1615, 1772, 1781
NciI	CCSGG	2 cut(s)	1064, 1644
NdeI	CATATG	2 cut(s)	1300, 1438
NlaIII	CATG	6 cut(s)	331, 1108, 1232, 1592, 1651, 1669
NlaIV	GGNNCC	1 cut(s)	1395
NmeAIII	GCCGAG	2 cut(s)	949, 1413
NmuCI	GTSAC	2 cut(s)	14, 1513
NsiI	ATGCAT	1 cut(s)	432
NspI	RCATGY	2 cut(s)	1232, 1592
PaeR7I	CTCGAG	1 cut(s)	1258
PdmI	GAANNNNTTC	1 cut(s)	1636
PfeI	GAWTC	3 cut(s)	82, 1583, 1718
PkrI	GCNGC	7 cut(s)	127, 659, 1383, 1386, 1765, 1768, 1783
PleI	GAGTC	1 cut(s)	340
PpsI	GAGTC	1 cut(s)	340
Ppu21I	YACGTR	2 cut(s)	413, 571
Psp124BI	GAGCTC	2 cut(s)	327, 595
Psp6I	CCWGG	3 cut(s)	10, 697, 1408
PspEI	GGTNACC	1 cut(s)	14
PspFI	CCCAGC	1 cut(s)	1605
PspGI	CCWGG	3 cut(s)	10, 697, 1408
PspN4I	GGNNCC	1 cut(s)	1395
PspPI	GGNCC	3 cut(s)	955, 1424, 1751
PspXI	VCTCGAGB	1 cut(s)	1258
PsrI	GAACNNNNNNTAC	2 cut(s)	1661, 1693
PstI	CTGCAG	2 cut(s)	1734, 1768
PsuI	RGATCY	3 cut(s)	207, 454, 859
RsaI	GTAC	2 cut(s)	626, 1264
RsaNI	GTAC	2 cut(s)	625, 1263
SacI	GAGCTC	2 cut(s)	327, 595
SaqAI	TTAA	9 cut(s)	222, 239, 264, 459, 498, 534, 1095, 1706, 1822
SatI	GCNGC	7 cut(s)	126, 658, 1382, 1385, 1764, 1767, 1782
Sau96I	GGNCC	3 cut(s)	955, 1424, 1751
SchI	GAGTC	1 cut(s)	341
ScrFI	CCNGG	5 cut(s)	12, 699, 1064, 1410, 1644
SduI	GDGCHC	3 cut(s)	189, 327, 595
SfaNI	GCATC	4 cut(s)	187, 396, 669, 1560
SfcI	CTRYAG	5 cut(s)	1146, 1730, 1755, 1764, 1776
Sfr274I	CTCGAG	1 cut(s)	1258
SinI	GGWCC	2 cut(s)	1424, 1751
SlaI	CTCGAG	1 cut(s)	1258
SmlI	CTYRAG	4 cut(s)	458, 1094, 1178, 1258
SmoI	CTYRAG	4 cut(s)	458, 1094, 1178, 1258
SsiI	CCGC	9 cut(s)	376, 668, 755, 814, 874, 1382, 1385, 1565, 1573
SspI	AATATT	1 cut(s)	555
SspMI	CTAG	7 cut(s)	518, 758, 866, 935, 959, 1073, 1488
SstI	GAGCTC	2 cut(s)	327, 595
StyD4I	CCNGG	5 cut(s)	10, 697, 1062, 1408, 1642
StyI	CCWWGG	3 cut(s)	742, 852, 1475
TaaI	ACNGT	2 cut(s)	582, 1252
TaiI	ACGT	2 cut(s)	415, 573
TaqI	TCGA	3 cut(s)	258, 1259, 1712
TatI	WGTACW	2 cut(s)	624, 1262
TauI	GCSGC	2 cut(s)	1384, 1387
TfiI	GAWTC	3 cut(s)	82, 1583, 1718
Tru1I	TTAA	9 cut(s)	222, 239, 264, 459, 498, 534, 1095, 1706, 1822
Tru9I	TTAA	9 cut(s)	222, 239, 264, 459, 498, 534, 1095, 1706, 1822
TscAI	CASTG	2 cut(s)	739, 1529
TseFI	GTSAC	2 cut(s)	14, 1513
TseI	GCWGC	5 cut(s)	125, 657, 1763, 1766, 1781
Tsp45I	GTSAC	2 cut(s)	14, 1513
TspDTI	ATGAA	4 cut(s)	704, 1121, 1596, 1682
TspRI	CASTG	2 cut(s)	739, 1529
Vha464I	CTTAAG	2 cut(s)	458, 1094
VpaK11BI	GGWCC	2 cut(s)	1424, 1751
XapI	RAATTY	4 cut(s)	845, 1007, 1013, 1288
XbaI	TCTAGA	1 cut(s)	1487
XceI	RCATGY	2 cut(s)	1232, 1592
XhoI	CTCGAG	1 cut(s)	1258
XmnI	GAANNNNTTC	1 cut(s)	1636
XspI	CTAG	7 cut(s)	518, 758, 866, 935, 959, 1073, 1488
Zsp2I	ATGCAT	1 cut(s)	432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.