Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001229

Physical Location & Seq

Genomic Coordinates Forward (+)

54757463 .. 54763814

Gene Structure 6352 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0426600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGCTTTGGTTAAAGGAGCACTAGTACTCAAGAAGCTCATTTTCTTTTTGGCTTTGTGCCTCATCAGCTTACTCTCTTCTTCTCAAGGTAAGGCGGCGGTTTACAATGAATTCAGATACCCATTTATAAAAAAAGCAAGCTCTTTCCCATCTGTATCATCATCTTCATCAAGTGGCCACAGCAATGACTATGACTACATAATTGTGGGAGGAGGCACAGCTGGGTGTCCTTTGGCTGCAACCCTCTCTCAGAATTTCAGTGTTTTGGTGCTCGAAAGAGGGGGGGTGCCTTTTGCAAATTCCAATGTCTCATTCCTACAAAACTTCCACATTGGCTTGGCAGACACTTCACCTAAATCTCCTTCTCAGCCCTTTGTTTCCACTGATGGAGTGATCAATTCCAGAGCTAGGGTTTTGGGTGGCGGCAGTGTCATCAATGCTGGATTCTATACCAGAGCAAGCCCAAGGTTTATAAAGAGAGTGGGATGGGATGCCAAGCTAGTAAATGAGTCATATCCCTGGATTGAGAAGCAAATTGTTCACGAGCCACTGCTTGAACCATTTCAGATGGCATTCAGGGACAGTCTTTTGGCTGCTGGGGTCTCACCTTTTAATGGATTCACTTATGATCACCTTTATGGAACCAAAGTTGGTGGAACCATTTTCGATAGATTTGGTCGTCGTCACTCTTCTGCTGAATTGCTGTCTTCTGGGAATCCTCAGAAGCTCACAGTCTTGATTTATGCAACAGTTCAAAAGATTCTTTTTGACACATCAGGGAAGAAACCAAAGGCAGTGGGAGTTACCTTCAAAGATGAAAATGGGAACCAACATCAAGCATTTCTTGTTGATAAGCCACAGAGTGAAGTACTATTGTCTAGTGGAGCAATTGGAAGCCCTCAAATGTTATTGCTAAGCGGTATTGGACCCAAAGCTGACCTAGAGAAGTTGAACATTCCAGTGGTGCTCAATAATGAGTTTGTTGGAAAAGGCATGGCTGATAATCCAATGAATGCAATCTTTGTCCCTAGCAGAAGAGCAGAAAAGCAGACGCTAATCGAAACTGTAGGGATCACCAAAATGGGTGTGTACATTGAAGCTAGCAGTGGATTTGGGCAGTCCAAAAATAGCATTGAATGCAACCACGGAATCCTGTCAGCTGAGATTGGACAGCTATCTACTATTCCTCCAAAGCAAAGAACCCCAGAAGTCATTCAAGCTTTCATCAAACACAAGAGAAACTTGCCCCATGAGGCATTTAAAGGAGGCTTTATTCTGGAAAAAATTGCAAGTCCAATTTCCAAAGGAGACCTTAGCCTGATCAACACCAATGTCGATGATAACCCCTCTGTCAGCTTCAACTACTTCAGCCACCCCTATGATCTTAAGCGCTGTGTTGATGGAATTCGAATAGCCACAAAGGTTGTGCAATCGGAGCATTTCACAAACTACACAAGAGTTGACAAGCAAACTGTGGAAAAGATACTTAACATGAGTGTGAAGGCTAATGTTAACCTCATACCTAAGAATATCAATGACACAAAGTCATTGGAGCAGTTCTGCAAAGACACTGTCATCACTATTTGGCATTACCATGGTGGGTGTCATGTGGGCACTGTGGTTAGCCCTGACAACAAAGTTCTTGGTGTCAACAGGGTCAGGGTTGTGGATGGCTCGACGTTTTCTCAATCCCCCGGAACTAATCCTCAGGCCACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATCTTGAGAGACAGATTGGGAAGAGCAGCTGGTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

595

Amino Acids

64.74

Weight (kDa)

9.47

Isoelectric Point (pI)

43.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GMC_oxred_N	PF00732	64 - 335	1.9e-18	GMC oxidoreductase
GMC_oxred_C	PF05199	432 - 577	5.1e-25	GMC oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001229)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29400 AT1G29400 AT1G29400
fragaria_vesca	FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250
malus_domestica	MD05G1291700.v1.1 MD09G1151600.v1.1 MD10G1267700.v1.1 MD17G1139300.v1.1
prunus_persica	Prupe.3G172900_v2.0.a1 Prupe.4G073800_v2.0.a1
pyrus_communis	pycom05g26820 pycom09g07120 pycom10g22380 pycom17g13240
rosa_chinensis	RchiOBHm_Chr2g0151511 RchiOBHm_Chr5g0012911
rosa_laevigata	RLG00000020556 RLG00000031968
rosa_multiflora	Rmu_sc0000940.1_g000021 Rmu_sc0016318.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063670 Rroxscaffold_2G00096390
rosa_rugosa	Rorug02G0426600 Rorug02G0426700 Rorug02G0426800 Rorug05G0005100 Rorug05G0005100 Rorug05G0005100
rosa_samantha	Rh2AG487500 Rh2BG499900 Rh2CG474000 Rh2DG511100 Rh5AG099400 Rh5BG096000 Rh5CG108300 Rh5DG094700
rosa_wichuraiana	Rw2G039960 Rw5G008680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	128, 473
Acc36I	ACCTGC	1 cut(s)	1722
AccB1I	GGYRCC	1 cut(s)	286
AciI	CCGC	4 cut(s)	95, 98, 423, 918
AclWI	GGATC	1 cut(s)	1079
AcoI	YGGCCR	1 cut(s)	175
AcsI	RAATTY	4 cut(s)	110, 253, 298, 1404
AcuI	CTGAAG	2 cut(s)	1351, 1766
AdeI	CACNNNGTG	1 cut(s)	863
AfaI	GTAC	4 cut(s)	27, 870, 1091, 1736
AfeI	AGCGCT	1 cut(s)	1391
AfiI	CCNNNNNNNGG	2 cut(s)	408, 614
AflII	CTTAAG	1 cut(s)	1385
AgsI	TTSAA	8 cut(s)	557, 755, 811, 952, 1097, 1136, 1217, 1360
AhdI	GACNNNNNGTC	1 cut(s)	1543
AhlI	ACTAGT	1 cut(s)	22
AjnI	CCWGG	1 cut(s)	518
AjuI	GAANNNNNNNTTGG	2 cut(s)	296, 328
Alw21I	GWGCWC	3 cut(s)	22, 273, 969
Alw26I	GTCTC	4 cut(s)	313, 607, 1302, 1752
AlwI	GGATC	1 cut(s)	1079
Aor51HI	AGCGCT	1 cut(s)	1391
AoxI	GGCC	2 cut(s)	175, 1710
ApeKI	GCWGC	3 cut(s)	236, 593, 1775
ApoI	RAATTY	4 cut(s)	110, 253, 298, 1404
ArsI	GACNNNNNNTTYG	2 cut(s)	1557, 1589
Asp700I	GAANNNNTTC	2 cut(s)	561, 1212
AspLEI	GCGC	1 cut(s)	1392
AspS9I	GGNCC	1 cut(s)	926
AsuC2I	CCSGG	1 cut(s)	1695
AsuHPI	GGTGA	4 cut(s)	342, 597, 623, 1066
AsuII	TTCGAA	1 cut(s)	1408
AsuNHI	GCTAGC	1 cut(s)	1100
AvaII	GGWCC	1 cut(s)	926
AxyI	CCTNAGG	1 cut(s)	1707
BaeGI	GKGCMC	1 cut(s)	1616
BalI	TGGCCA	1 cut(s)	177
BanI	GGYRCC	1 cut(s)	286
BauI	CACGAG	1 cut(s)	542
BbsI	GAAGAC	1 cut(s)	699
Bbv12I	GWGCWC	3 cut(s)	22, 273, 969
BbvI	GCAGC	2 cut(s)	223, 580
BccI	CCATC	7 cut(s)	157, 380, 480, 562, 1394, 1664, 1720
BciT130I	CCWGG	1 cut(s)	520
BclI	TGATCA	3 cut(s)	393, 628, 1320
BcnI	CCSGG	1 cut(s)	1695
BcoDI	GTCTC	4 cut(s)	313, 607, 1302, 1752
BcuI	ACTAGT	1 cut(s)	22
BfaI	CTAG	7 cut(s)	23, 408, 500, 879, 941, 1029, 1101
BfmI	CTRYAG	1 cut(s)	1065
BfoI	RGCGCY	1 cut(s)	1393
BfrI	CTTAAG	1 cut(s)	1385
BfuAI	ACCTGC	1 cut(s)	1722
BglII	AGATCT	1 cut(s)	1749
BisI	GCNGC	5 cut(s)	96, 237, 424, 594, 1776
BlpI	GCTNAGC	1 cut(s)	914
BlsI	GCNGC	5 cut(s)	97, 238, 425, 595, 1777
BmcAI	AGTACT	2 cut(s)	27, 870
Bme1390I	CCNGG	2 cut(s)	520, 1695
Bme18I	GGWCC	1 cut(s)	926
BmeRI	GACNNNNNGTC	1 cut(s)	1543
BmgT120I	GGNCC	1 cut(s)	926
BmiI	GGNNCC	5 cut(s)	288, 643, 658, 827, 928
BmrFI	CCNGG	2 cut(s)	520, 1695
BmsI	GCATC	1 cut(s)	481
BmtI	GCTAGC	1 cut(s)	1104
BpiI	GAAGAC	1 cut(s)	699
Bpu10I	CCTNAGC	1 cut(s)	1313
Bpu1102I	GCTNAGC	1 cut(s)	914
Bpu14I	TTCGAA	1 cut(s)	1408
BpuEI	CTTGAG	3 cut(s)	14, 69, 1774
BpuMI	CCSGG	1 cut(s)	1695
BsaI	GGTCTC	2 cut(s)	607, 1302
BsaJI	CCNNGG	5 cut(s)	464, 518, 1144, 1594, 1693
BsaXI	ACNNNNNCTCC	4 cut(s)	9, 39, 1171, 1201
Bsc4I	CCNNNNNNNGG	2 cut(s)	408, 614
Bse1I	ACTGG	1 cut(s)	959
Bse21I	CCTNAGG	1 cut(s)	1707
Bse3DI	GCAATG	1 cut(s)	190
BseBI	CCWGG	1 cut(s)	520
BseDI	CCNNGG	5 cut(s)	464, 518, 1144, 1594, 1693
BseGI	GGATG	3 cut(s)	491, 496, 1675
BseLI	CCNNNNNNNGG	2 cut(s)	408, 614
BseMI	GCAATG	1 cut(s)	190
BseMII	CTCAG	5 cut(s)	263, 380, 734, 1152, 1721
BseNI	ACTGG	1 cut(s)	959
BseRI	GAGGAG	1 cut(s)	225
BseSI	GKGCMC	1 cut(s)	1616
BseXI	GCAGC	2 cut(s)	223, 580
BseYI	CCCAGC	2 cut(s)	221, 596
BshFI	GGCC	2 cut(s)	177, 1712
BshNI	GGYRCC	1 cut(s)	286
BsiHKAI	GWGCWC	3 cut(s)	22, 273, 969
BsiSI	CCGG	1 cut(s)	1695
BslFI	GGGAC	3 cut(s)	593, 1010, 1755
BslI	CCNNNNNNNGG	2 cut(s)	408, 614
BsmAI	GTCTC	4 cut(s)	313, 607, 1302, 1752
BsmFI	GGGAC	3 cut(s)	593, 1010, 1755
BsmI	GAATGC	3 cut(s)	572, 1018, 1142
BsnI	GGCC	2 cut(s)	177, 1712
Bso31I	GGTCTC	2 cut(s)	607, 1302
Bsp119I	TTCGAA	1 cut(s)	1408
Bsp1286I	GDGCHC	4 cut(s)	22, 273, 969, 1616
Bsp1407I	TGTACA	1 cut(s)	1089
Bsp143I	GATC	6 cut(s)	393, 628, 1071, 1320, 1381, 1749
Bsp1720I	GCTNAGC	1 cut(s)	914
Bsp19I	CCATGG	1 cut(s)	1594
BspACI	CCGC	4 cut(s)	95, 98, 423, 918
BspANI	GGCC	2 cut(s)	177, 1712
BspCNI	CTCAG	5 cut(s)	262, 379, 733, 1153, 1720
BspHI	TCATGA	1 cut(s)	1719
BspLI	GGNNCC	5 cut(s)	288, 643, 658, 827, 928
BspMI	ACCTGC	1 cut(s)	1722
BspOI	GCTAGC	1 cut(s)	1104
BspPI	GGATC	1 cut(s)	1079
BspQI	GCTCTTC	2 cut(s)	1030, 1765
BspT104I	TTCGAA	1 cut(s)	1408
BspT107I	GGYRCC	1 cut(s)	286
BspTI	CTTAAG	1 cut(s)	1385
BspTNI	GGTCTC	2 cut(s)	607, 1302
BsrDI	GCAATG	1 cut(s)	190
BsrGI	TGTACA	1 cut(s)	1089
BsrI	ACTGG	1 cut(s)	959
BssECI	CCNNGG	5 cut(s)	464, 518, 1144, 1594, 1693
BssMI	GATC	6 cut(s)	393, 628, 1071, 1320, 1381, 1749
BssSI	CACGAG	1 cut(s)	542
BssT1I	CCWWGG	2 cut(s)	464, 1594
Bst2BI	CACGAG	1 cut(s)	542
Bst2UI	CCWGG	1 cut(s)	520
Bst4CI	ACNGT	8 cut(s)	584, 733, 751, 1066, 1474, 1573, 1618, 1717
Bst6I	CTCTTC	4 cut(s)	82, 694, 1030, 1765
BstAFI	CTTAAG	1 cut(s)	1385
BstAPI	GCANNNNNTGC	1 cut(s)	1137
BstAUI	TGTACA	1 cut(s)	1089
BstBI	TTCGAA	1 cut(s)	1408
BstC8I	GCNNGC	3 cut(s)	139, 460, 1102
BstDEI	CTNAG	8 cut(s)	249, 366, 720, 914, 1161, 1313, 1524, 1707
BstDSI	CCRYGG	2 cut(s)	1144, 1594
BstF5I	GGATG	3 cut(s)	491, 496, 1675
BstH2I	RGCGCY	1 cut(s)	1393
BstHHI	GCGC	1 cut(s)	1392
BstKTI	GATC	6 cut(s)	396, 631, 1074, 1323, 1384, 1752
BstMAI	GTCTC	4 cut(s)	313, 607, 1302, 1752
BstMBI	GATC	6 cut(s)	393, 628, 1071, 1320, 1381, 1749
BstMWI	GCNNNNNNNGC	3 cut(s)	66, 1137, 1435
BstNI	CCWGG	1 cut(s)	520
BstSCI	CCNGG	2 cut(s)	518, 1693
BstSFI	CTRYAG	1 cut(s)	1065
BstSLI	GKGCMC	1 cut(s)	1616
BstV1I	GCAGC	2 cut(s)	223, 580
BstV2I	GAAGAC	1 cut(s)	699
BstX2I	RGATCY	1 cut(s)	1749
BstYI	RGATCY	1 cut(s)	1749
Bsu36I	CCTNAGG	1 cut(s)	1707
BsuRI	GGCC	2 cut(s)	177, 1712
BtgI	CCRYGG	2 cut(s)	1144, 1594
BtsCI	GGATG	3 cut(s)	491, 496, 1675
BtsI	GCAGTG	4 cut(s)	433, 548, 801, 1111
BveI	ACCTGC	1 cut(s)	1722
Cac8I	GCNNGC	3 cut(s)	139, 460, 1102
CciI	TCATGA	1 cut(s)	1719
CfoI	GCGC	1 cut(s)	1392
Cfr13I	GGNCC	1 cut(s)	926
CseI	GACGC	1 cut(s)	1060
Csp6I	GTAC	4 cut(s)	26, 869, 1090, 1735
CspCI	CAANNNNNGTGG	6 cut(s)	634, 669, 777, 812, 1405, 1440
CviAII	CATG	7 cut(s)	994, 1250, 1492, 1595, 1607, 1720, 1738
CviQI	GTAC	4 cut(s)	26, 869, 1090, 1735
DdeI	CTNAG	8 cut(s)	249, 366, 720, 914, 1161, 1313, 1524, 1707
DpnI	GATC	6 cut(s)	395, 630, 1073, 1322, 1383, 1751
DpnII	GATC	6 cut(s)	393, 628, 1071, 1320, 1381, 1749
DraI	TTTAAA	1 cut(s)	1261
DraIII	CACNNNGTG	1 cut(s)	863
DriI	GACNNNNNGTC	1 cut(s)	1543
EaeI	YGGCCR	1 cut(s)	175
Eam1104I	CTCTTC	4 cut(s)	82, 694, 1030, 1765
Eam1105I	GACNNNNNGTC	1 cut(s)	1543
EarI	CTCTTC	4 cut(s)	82, 694, 1030, 1765
Eco130I	CCWWGG	2 cut(s)	464, 1594
Eco31I	GGTCTC	2 cut(s)	607, 1302
Eco47I	GGWCC	1 cut(s)	926
Eco47III	AGCGCT	1 cut(s)	1391
Eco57I	CTGAAG	2 cut(s)	1351, 1766
Eco81I	CCTNAGG	1 cut(s)	1707
EcoRI	GAATTC	2 cut(s)	110, 1404
EcoRII	CCWGG	1 cut(s)	518
EcoT14I	CCWWGG	2 cut(s)	464, 1594
ErhI	CCWWGG	2 cut(s)	464, 1594
FaeI	CATG	7 cut(s)	997, 1253, 1495, 1598, 1610, 1723, 1741
FalI	AAGNNNNNCTT	6 cut(s)	828, 860, 1226, 1258, 1296, 1328
FaqI	GGGAC	3 cut(s)	593, 1010, 1755
FatI	CATG	7 cut(s)	993, 1249, 1491, 1594, 1606, 1719, 1737
FbaI	TGATCA	3 cut(s)	393, 628, 1320
Fnu4HI	GCNGC	5 cut(s)	96, 237, 424, 594, 1776
FokI	GGATG	3 cut(s)	498, 503, 1682
Fsp4HI	GCNGC	5 cut(s)	96, 237, 424, 594, 1776
FspBI	CTAG	7 cut(s)	23, 408, 500, 879, 941, 1029, 1101
GlaI	GCGC	1 cut(s)	1391
GluI	GCNGC	5 cut(s)	96, 237, 424, 594, 1776
GsaI	CCCAGC	2 cut(s)	225, 600
HaeII	RGCGCY	1 cut(s)	1393
HaeIII	GGCC	2 cut(s)	177, 1712
HapII	CCGG	1 cut(s)	1695
HgaI	GACGC	1 cut(s)	1060
HhaI	GCGC	1 cut(s)	1392
Hin1II	CATG	7 cut(s)	997, 1253, 1495, 1598, 1610, 1723, 1741
Hin6I	GCGC	1 cut(s)	1390
HinP1I	GCGC	1 cut(s)	1390
HincII	GTYRAC	3 cut(s)	1462, 1513, 1651
HindII	GTYRAC	3 cut(s)	1462, 1513, 1651
HindIII	AAGCTT	1 cut(s)	1218
HinfI	GANTC	6 cut(s)	444, 509, 618, 715, 760, 1149
HpaI	GTTAAC	1 cut(s)	1513
HpaII	CCGG	1 cut(s)	1695
HphI	GGTGA	4 cut(s)	342, 597, 623, 1066
Hpy166II	GTNNAC	6 cut(s)	103, 541, 1090, 1462, 1513, 1651
Hpy188I	TCNGA	5 cut(s)	116, 252, 567, 723, 1435
Hpy188III	TCNNGA	7 cut(s)	31, 402, 542, 736, 1277, 1720, 1753
Hpy8I	GTNNAC	6 cut(s)	103, 541, 1090, 1462, 1513, 1651
Hpy99I	CGWCG	2 cut(s)	684, 1681
HpyAV	CCTTC	3 cut(s)	372, 817, 1495
HpyCH4III	ACNGT	8 cut(s)	584, 733, 751, 1066, 1474, 1573, 1618, 1717
HpyCH4IV	ACGT	1 cut(s)	1679
HpyCH4V	TGCA	8 cut(s)	239, 296, 746, 1016, 1140, 1289, 1429, 1563
HpyF10VI	GCNNNNNNNGC	3 cut(s)	66, 1137, 1435
HpyF3I	CTNAG	8 cut(s)	249, 366, 720, 914, 1161, 1313, 1524, 1707
HpySE526I	ACGT	1 cut(s)	1679
Hsp92II	CATG	7 cut(s)	997, 1253, 1495, 1598, 1610, 1723, 1741
HspAI	GCGC	1 cut(s)	1390
Ksp22I	TGATCA	3 cut(s)	393, 628, 1320
KspAI	GTTAAC	1 cut(s)	1513
Kzo9I	GATC	6 cut(s)	393, 628, 1071, 1320, 1381, 1749
LguI	GCTCTTC	2 cut(s)	1030, 1765
LmnI	GCTCC	4 cut(s)	17, 884, 1435, 1552
Lsp1109I	GCAGC	2 cut(s)	223, 580
LweI	GCATC	1 cut(s)	481
MaeI	CTAG	7 cut(s)	23, 408, 500, 879, 941, 1029, 1101
MaeII	ACGT	1 cut(s)	1679
MaeIII	GTNAC	2 cut(s)	683, 802
MalI	GATC	6 cut(s)	395, 630, 1073, 1322, 1383, 1751
MboI	GATC	6 cut(s)	393, 628, 1071, 1320, 1381, 1749
MboII	GAAGA	9 cut(s)	69, 72, 156, 681, 699, 793, 1047, 1759, 1782
MfeI	CAATTG	1 cut(s)	888
MflI	RGATCY	1 cut(s)	1749
MhlI	GDGCHC	4 cut(s)	22, 273, 969, 1616
MlsI	TGGCCA	1 cut(s)	177
MluNI	TGGCCA	1 cut(s)	177
MlyI	GAGTC	1 cut(s)	518
MmeI	TCCRAC	1 cut(s)	964
Mox20I	TGGCCA	1 cut(s)	177
MroXI	GAANNNNTTC	2 cut(s)	561, 1212
MscI	TGGCCA	1 cut(s)	177
MseI	TTAA	6 cut(s)	12, 612, 1260, 1386, 1488, 1512
Msp20I	TGGCCA	1 cut(s)	177
MspA1I	CMGCKG	3 cut(s)	221, 1160, 1778
MspCI	CTTAAG	1 cut(s)	1385
MspI	CCGG	1 cut(s)	1695
MspR9I	CCNGG	2 cut(s)	520, 1695
MunI	CAATTG	1 cut(s)	888
Mva1269I	GAATGC	3 cut(s)	572, 1018, 1142
MvaI	CCWGG	1 cut(s)	520
MwoI	GCNNNNNNNGC	3 cut(s)	66, 1137, 1435
NciI	CCSGG	1 cut(s)	1695
NcoI	CCATGG	1 cut(s)	1594
NdeII	GATC	6 cut(s)	393, 628, 1071, 1320, 1381, 1749
NheI	GCTAGC	1 cut(s)	1100
NlaIII	CATG	7 cut(s)	997, 1253, 1495, 1598, 1610, 1723, 1741
NlaIV	GGNNCC	5 cut(s)	288, 643, 658, 827, 928
NmuCI	GTSAC	1 cut(s)	683
NspV	TTCGAA	1 cut(s)	1408
PagI	TCATGA	1 cut(s)	1719
PciSI	GCTCTTC	2 cut(s)	1030, 1765
PctI	GAATGC	3 cut(s)	572, 1018, 1142
PdmI	GAANNNNTTC	2 cut(s)	561, 1212
PfeI	GAWTC	5 cut(s)	444, 618, 715, 760, 1149
PflFI	GACNNNGTC	1 cut(s)	1571
PkrI	GCNGC	5 cut(s)	97, 238, 425, 595, 1777
PleI	GAGTC	1 cut(s)	517
PpsI	GAGTC	1 cut(s)	517
PsiI	TTATAA	2 cut(s)	128, 473
Psp6I	CCWGG	1 cut(s)	518
PspFI	CCCAGC	2 cut(s)	221, 596
PspGI	CCWGG	1 cut(s)	518
PspN4I	GGNNCC	5 cut(s)	288, 643, 658, 827, 928
PspPI	GGNCC	1 cut(s)	926
PsuI	RGATCY	1 cut(s)	1749
PsyI	GACNNNGTC	1 cut(s)	1571
PvuII	CAGCTG	3 cut(s)	221, 1160, 1778
RsaI	GTAC	4 cut(s)	27, 870, 1091, 1736
RsaNI	GTAC	4 cut(s)	26, 869, 1090, 1735
SapI	GCTCTTC	2 cut(s)	1030, 1765
SaqAI	TTAA	6 cut(s)	12, 612, 1260, 1386, 1488, 1512
SatI	GCNGC	5 cut(s)	96, 237, 424, 594, 1776
Sau3AI	GATC	6 cut(s)	393, 628, 1071, 1320, 1381, 1749
Sau96I	GGNCC	1 cut(s)	926
ScaI	AGTACT	2 cut(s)	27, 870
SchI	GAGTC	1 cut(s)	518
ScrFI	CCNGG	2 cut(s)	520, 1695
SduI	GDGCHC	4 cut(s)	22, 273, 969, 1616
SfaNI	GCATC	1 cut(s)	481
SfcI	CTRYAG	1 cut(s)	1065
SfuI	TTCGAA	1 cut(s)	1408
SinI	GGWCC	1 cut(s)	926
SmlI	CTYRAG	4 cut(s)	29, 84, 1385, 1753
SmoI	CTYRAG	4 cut(s)	29, 84, 1385, 1753
SpeI	ACTAGT	1 cut(s)	22
SsiI	CCGC	4 cut(s)	95, 98, 423, 918
SspMI	CTAG	7 cut(s)	23, 408, 500, 879, 941, 1029, 1101
StyD4I	CCNGG	2 cut(s)	518, 1693
StyI	CCWWGG	2 cut(s)	464, 1594
TaaI	ACNGT	8 cut(s)	584, 733, 751, 1066, 1474, 1573, 1618, 1717
TaiI	ACGT	1 cut(s)	1682
TaqI	TCGA	6 cut(s)	273, 666, 1059, 1335, 1408, 1676
TatI	WGTACW	3 cut(s)	25, 868, 1089
TauI	GCSGC	2 cut(s)	98, 426
TfiI	GAWTC	5 cut(s)	444, 618, 715, 760, 1149
Tru1I	TTAA	6 cut(s)	12, 612, 1260, 1386, 1488, 1512
Tru9I	TTAA	6 cut(s)	12, 612, 1260, 1386, 1488, 1512
TseFI	GTSAC	1 cut(s)	683
TseI	GCWGC	3 cut(s)	236, 593, 1775
Tsp45I	GTSAC	1 cut(s)	683
TspDTI	ATGAA	5 cut(s)	123, 156, 831, 1025, 1213
TspGWI	ACGGA	1 cut(s)	1161
Tth111I	GACNNNGTC	1 cut(s)	1571
Vha464I	CTTAAG	1 cut(s)	1385
VpaK11BI	GGWCC	1 cut(s)	926
XapI	RAATTY	4 cut(s)	110, 253, 298, 1404
XmnI	GAANNNNTTC	2 cut(s)	561, 1212
XspI	CTAG	7 cut(s)	23, 408, 500, 879, 941, 1029, 1101
ZrmI	AGTACT	2 cut(s)	27, 870

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.