Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0001229

Physical Location & Seq

Genomic Coordinates Reverse (-)

27964091 .. 27967921

Gene Structure 3831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g26820.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGATCTTGACCTCAGCGGGTTGCCTGGTTCACTGGAAGACTTGGAAGATTATCGATCTCTTTGGTAGTGGAGGCGGCATGGAATTGGAAACTGATGCACAGGAGAGCCTGAGAATAGGCATGTCAAAAGTAAGTATAGCTGACAGTTCTACTGGGAATGGGATGGCTCAATTTGCCCTTCCAAATGGTGTGGGAGCTGTTGCTGGAGAACATCCATATGGAGAGCATCCTTCCAGAACATTGTTTGTGCGAAATATCAATAGTAATGTCGAGGATTCAGAACTGAGAACACTTTTTGAGCAATACGGGGATATTAGAACGCTGTACACTGCGTGTAAACATAGGGGCTTTGTGATGATATCTTATTATGATATTCGTGCTGCTCGAACTGCTATGCGCACATTACAAAACAAGCCACTGCGACGGAGGAAACTTGATATTCACTTCTCAATTCCAAAGGATAATCCATCAGAGAAGGATATTAATCAAGGAACTTTGGTAGTTTTCAATTTGGATCCATCGGTTTCAAATGAAGACCTCCGTCAAATATTTGGGGGTTATGGCGAGGTCAAAGAGATAAGGGAAACACCACACAAGAGGCATCATAAATTTATTGAGTATTATGATGTTAGAGCTGCAGAAGCAGCCCTTAAGTCGTTAAATAGGAGTGACATAGCTGGTAAACGCATAAAGCTTGAACCCAGTCGACCTGGTGGAGCTCGTCGAAACTTGATGCTGCAACTGAATCAAGACCCTGAACAAGATGAATCTCAGAGTTTTCGACATCCAGTGGGTTCCCCGATAACCATCTCTCCACCAGGTAACTGGGCTCAGTTTCACAACCCAATGGAACATAGTCCTGTACGGAGTATTAGTAAATCTCCTGGTTTCGGGACAATTAGTCCAACAAACAGCAACCATTTGTCTGGATTAGCGTCAATTCTGCATCCCCAGACATCAAACACTGTGAAGGTTGCACCCATTGGCAATAACCATGGAAGGGGGAGTCATGCTGATCATATATTTTCCAATACAAACTCATCCCACGGATCTGCATTTCAACAATCCCACTCATTTCCAGAGAACTCAACCCATTTCCAAGGATCCATGCCCTCGTTCAGTCCTTCAACCTCAAGTGGATCTCATGTGGAAACATTATCAGGCCCGCAATTCCTTTGGGGGAGTCCGACTCCTTACTCAGAAAACACCAACTCTTCAGCTTGGCATCACCAATCAGTGGGACATCAACTTACATCCAATGGGAAGGGGCATGCCTTTCCATTCTCAGGTCATAATGGCTCTTTGCTCAGCTCTTCCCATCATCATCATCATCATCATCATCATCATCATGTTGGATCTGCCCCATCTGGTGTTCATTTAGACAGCCGCTTTAATTACTTTCCAGAGTCACCAGAAACATCTTTTTTGGGTCCCGCTGCCTATGGAGGCATGAGTTTGCGCCCCAATCGTGGAAATTTTATGATTAACATGGGTGCTCGTGCTTCAAGAAATAGTGGCACATCCATACTGGGAAACATGTCTGAAAGTAGTTCGTCAAGCTTTAAAATGGTGGGCTCACCGAAGCTTAGCCCTGTGTTTTTAGGGAATGGCCCGTACGCAGGACTGCCACCTACAAGCATAGATGGTTTGATTGAGCGTGGGAGGAGCAGACGAATGGAGAATAATGGGACCCAGATTGATAGCAAGAAGCAGTTTCAGCTTGATTTGGATAAGATTGTCTCCGGGGAAGATACTCGAACAACATTAATGATTAAAAATATTCCAAACAAGTACACCTCGAAAATGTTACTTGCTGCAATAGATGAAAATCACAGGGGTACTTTTGATTTTCTCTATCTGCCAATTGATTTTAAGAACAAATGCAATGTGGGCTATGCATTTATCAATATGCTGTCTCCTTCACACATCATCCCATTTTATGAGGCATTTAATGGAAAGAAGTGGGAGAAGTTCAATAGTGAGAAAGTTGCCTCCTTGGCTTATGCTCGAATCCAGGGGAAGGTGGCTCTTGTAGCCCACTTTCAAAATTCAAGCCTAATGAATGAAGACAAACGTTGTCGTCCGATTCTCTTTCATTCTGAGGGTTCTGAGGCTGGTGATCAGATCATCCAAGAGCATCTTCCTTCCAACAATTTGGACATCCAGGTCGGTCAGGAAAAGGAGTTGGACTCTGATTCATCAGGAAGCCCAGAGCATGGCTTTGACGAGAAGCCAGATAAGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008150 GO:0010564 GO:0010638 GO:0033043 GO:0040008 GO:0040020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045787 GO:0045836 GO:0045927 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051445 GO:0051446 GO:0051726 GO:0051783 GO:0051785 GO:0065007 GO:0090068 GO:0097159 GO:1901363 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

749

Amino Acids

82.56

Weight (kDa)

8.19

Isoelectric Point (pI)

51.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001229)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29400 AT1G29400 AT1G29400
fragaria_vesca	FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250
malus_domestica	MD05G1291700.v1.1 MD09G1151600.v1.1 MD10G1267700.v1.1 MD17G1139300.v1.1
prunus_persica	Prupe.3G172900_v2.0.a1 Prupe.4G073800_v2.0.a1
pyrus_communis	pycom05g26820 pycom09g07120 pycom10g22380 pycom17g13240
rosa_chinensis	RchiOBHm_Chr2g0151511 RchiOBHm_Chr5g0012911
rosa_laevigata	RLG00000020556 RLG00000031968
rosa_multiflora	Rmu_sc0000940.1_g000021 Rmu_sc0016318.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063670 Rroxscaffold_2G00096390
rosa_rugosa	Rorug02G0426600 Rorug02G0426700 Rorug02G0426800 Rorug05G0005100 Rorug05G0005100 Rorug05G0005100
rosa_samantha	Rh2AG487500 Rh2BG499900 Rh2CG474000 Rh2DG511100 Rh5AG099400 Rh5BG096000 Rh5CG108300 Rh5DG094700
rosa_wichuraiana	Rw2G039960 Rw5G008680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2165
Acc16I	TGCGCA	1 cut(s)	398
AccB7I	CCANNNNNTGG	2 cut(s)	1237, 2216
AccI	GTMKAC	1 cut(s)	706
AciI	CCGC	5 cut(s)	17, 75, 1166, 1387, 1434
AclI	AACGTT	1 cut(s)	2074
AclWI	GGATC	7 cut(s)	509, 522, 1057, 1098, 1111, 1147, 1363
AcsI	RAATTY	3 cut(s)	608, 1474, 2047
AcuI	CTGAAG	1 cut(s)	1200
AdeI	CACNNNGTG	1 cut(s)	333
AfaI	GTAC	5 cut(s)	326, 864, 1616, 1793, 1840
AfiI	CCNNNNNNNGG	8 cut(s)	890, 1000, 1237, 1286, 1469, 1619, 2020, 2216
AflII	CTTAAG	1 cut(s)	650
AflIII	ACRYGT	1 cut(s)	1536
AgsI	TTSAA	9 cut(s)	508, 528, 698, 1061, 1128, 1506, 1975, 2045, 2052
AhdI	GACNNNNNGTC	1 cut(s)	900
AjnI	CCWGG	6 cut(s)	24, 709, 817, 883, 2013, 2163
AjuI	GAANNNNNNNTTGG	2 cut(s)	2124, 2156
Alw21I	GWGCWC	2 cut(s)	721, 1498
Alw26I	GTCTC	2 cut(s)	1744, 1920
AlwI	GGATC	7 cut(s)	509, 522, 1057, 1098, 1111, 1147, 1363
AoxI	GGCC	2 cut(s)	1162, 1609
ApeKI	GCWGC	6 cut(s)	380, 635, 644, 736, 1436, 1814
ApoI	RAATTY	3 cut(s)	608, 1474, 2047
AseI	ATTAAT	2 cut(s)	483, 1766
AspLEI	GCGC	2 cut(s)	399, 1461
AspS9I	GGNCC	4 cut(s)	1163, 1430, 1610, 1689
AsuC2I	CCSGG	1 cut(s)	1744
AsuHPI	GGTGA	4 cut(s)	1220, 1401, 1569, 2129
AvaII	GGWCC	2 cut(s)	1430, 1689
BamHI	GGATCC	2 cut(s)	514, 1103
BanII	GRGCYC	3 cut(s)	721, 832, 1577
BauI	CACGAG	1 cut(s)	1497
BbsI	GAAGAC	3 cut(s)	44, 540, 2073
Bbv12I	GWGCWC	2 cut(s)	721, 1498
BbvCI	CCTCAGC	1 cut(s)	13
BbvI	GCAGC	6 cut(s)	367, 622, 656, 723, 1423, 1801
BccI	CCATC	7 cut(s)	157, 475, 526, 815, 1326, 1372, 1637
BciT130I	CCWGG	6 cut(s)	26, 711, 819, 885, 2015, 2165
BclI	TGATCA	2 cut(s)	1015, 2119
BcnI	CCSGG	1 cut(s)	1744
BcoDI	GTCTC	2 cut(s)	1744, 1920
BfmI	CTRYAG	1 cut(s)	636
BfrI	CTTAAG	1 cut(s)	650
BglI	GCCNNNNNGGC	1 cut(s)	1997
BisI	GCNGC	8 cut(s)	76, 381, 636, 645, 737, 1387, 1437, 1815
BlpI	GCTNAGC	2 cut(s)	1307, 1586
BlsI	GCNGC	8 cut(s)	77, 382, 637, 646, 738, 1388, 1438, 1816
Bme1390I	CCNGG	7 cut(s)	26, 711, 819, 885, 1744, 2015, 2165
Bme18I	GGWCC	2 cut(s)	1430, 1689
BmeRI	GACNNNNNGTC	1 cut(s)	900
BmgT120I	GGNCC	4 cut(s)	1163, 1430, 1610, 1689
BmiI	GGNNCC	7 cut(s)	516, 796, 1105, 1431, 1432, 1690, 1691
BmrFI	CCNGG	7 cut(s)	26, 711, 819, 885, 1744, 2015, 2165
BmrI	ACTGGG	4 cut(s)	162, 696, 835, 1538
BmsI	GCATC	7 cut(s)	85, 235, 610, 723, 955, 1234, 2146
BmuI	ACTGGG	4 cut(s)	162, 696, 835, 1538
BoxI	GACNNNNGTC	1 cut(s)	540
BpiI	GAAGAC	3 cut(s)	44, 540, 2073
BplI	GAGNNNNNCTC	4 cut(s)	1174, 1206, 2174, 2206
BpmI	CTGGAG	1 cut(s)	225
Bpu10I	CCTNAGC	1 cut(s)	13
Bpu1102I	GCTNAGC	2 cut(s)	1307, 1586
BpuEI	CTTGAG	1 cut(s)	1117
BpuMI	CCSGG	1 cut(s)	1744
Bsa29I	ATCGAT	1 cut(s)	54
BsaBI	GATNNNNATC	3 cut(s)	483, 806, 1827
BsaJI	CCNNGG	6 cut(s)	994, 1045, 1099, 1743, 1995, 2014
BsaXI	ACNNNNNCTCC	4 cut(s)	796, 826, 859, 889
Bsc4I	CCNNNNNNNGG	8 cut(s)	890, 1000, 1237, 1286, 1469, 1619, 2020, 2216
Bse1I	ACTGG	6 cut(s)	38, 157, 702, 788, 830, 1533
Bse3DI	GCAATG	1 cut(s)	1891
Bse8I	GATNNNNATC	3 cut(s)	483, 806, 1827
BseBI	CCWGG	6 cut(s)	26, 711, 819, 885, 2015, 2165
BseCI	ATCGAT	1 cut(s)	54
BseDI	CCNNGG	6 cut(s)	994, 1045, 1099, 1743, 1995, 2014
BseJI	GATNNNNATC	3 cut(s)	483, 806, 1827
BseLI	CCNNNNNNNGG	8 cut(s)	890, 1000, 1237, 1286, 1469, 1619, 2020, 2216
BseMI	GCAATG	1 cut(s)	1891
BseNI	ACTGG	6 cut(s)	38, 157, 702, 788, 830, 1533
BseRI	GAGGAG	1 cut(s)	1678
BseXI	GCAGC	6 cut(s)	367, 622, 656, 723, 1423, 1801
BshFI	GGCC	2 cut(s)	1164, 1611
BshVI	ATCGAT	1 cut(s)	54
BsiHKAI	GWGCWC	2 cut(s)	721, 1498
BsiSI	CCGG	1 cut(s)	1743
BsiWI	CGTACG	1 cut(s)	1614
BslFI	GGGAC	4 cut(s)	907, 1254, 1416, 1702
BslI	CCNNNNNNNGG	8 cut(s)	890, 1000, 1237, 1286, 1469, 1619, 2020, 2216
BsmAI	GTCTC	2 cut(s)	1744, 1920
BsmFI	GGGAC	4 cut(s)	907, 1254, 1416, 1702
BsnI	GGCC	2 cut(s)	1164, 1611
Bsp1286I	GDGCHC	4 cut(s)	721, 832, 1498, 1577
Bsp1407I	TGTACA	1 cut(s)	324
Bsp1720I	GCTNAGC	2 cut(s)	1307, 1586
Bsp19I	CCATGG	1 cut(s)	994
BspACI	CCGC	5 cut(s)	17, 75, 1166, 1387, 1434
BspANI	GGCC	2 cut(s)	1164, 1611
BspDI	ATCGAT	1 cut(s)	54
BspLI	GGNNCC	7 cut(s)	516, 796, 1105, 1431, 1432, 1690, 1691
BspMAI	CTGCAG	1 cut(s)	640
BspPI	GGATC	7 cut(s)	509, 522, 1057, 1098, 1111, 1147, 1363
BspQI	GCTCTTC	1 cut(s)	1318
BspTI	CTTAAG	1 cut(s)	650
BsrDI	GCAATG	1 cut(s)	1891
BsrGI	TGTACA	1 cut(s)	324
BsrI	ACTGG	6 cut(s)	38, 157, 702, 788, 830, 1533
BssECI	CCNNGG	6 cut(s)	994, 1045, 1099, 1743, 1995, 2014
BssSI	CACGAG	1 cut(s)	1497
BssT1I	CCWWGG	3 cut(s)	994, 1099, 1995
Bst2BI	CACGAG	1 cut(s)	1497
Bst2UI	CCWGG	6 cut(s)	26, 711, 819, 885, 2015, 2165
Bst4CI	ACNGT	2 cut(s)	146, 967
Bst6I	CTCTTC	2 cut(s)	1219, 1318
BstAFI	CTTAAG	1 cut(s)	650
BstAUI	TGTACA	1 cut(s)	324
BstC8I	GCNNGC	2 cut(s)	1166, 1272
BstDSI	CCRYGG	2 cut(s)	994, 1045
BstHHI	GCGC	2 cut(s)	399, 1461
BstMAI	GTCTC	2 cut(s)	1744, 1920
BstMWI	GCNNNNNNNGC	8 cut(s)	173, 389, 641, 644, 1717, 1890, 1997, 2033
BstNI	CCWGG	6 cut(s)	26, 711, 819, 885, 2015, 2165
BstNSI	RCATGY	3 cut(s)	124, 1274, 1540
BstPAI	GACNNNNGTC	1 cut(s)	540
BstSCI	CCNGG	7 cut(s)	24, 709, 817, 883, 1742, 2013, 2163
BstSFI	CTRYAG	1 cut(s)	636
BstV1I	GCAGC	6 cut(s)	367, 622, 656, 723, 1423, 1801
BstV2I	GAAGAC	3 cut(s)	44, 540, 2073
BstX2I	RGATCY	5 cut(s)	514, 1049, 1103, 1139, 1355
BstXI	CCANNNNNNTGG	3 cut(s)	825, 926, 2155
BstYI	RGATCY	5 cut(s)	514, 1049, 1103, 1139, 1355
Bsu15I	ATCGAT	1 cut(s)	54
BsuRI	GGCC	2 cut(s)	1164, 1611
BsuTUI	ATCGAT	1 cut(s)	54
BtgI	CCRYGG	2 cut(s)	994, 1045
BtsI	GCAGTG	2 cut(s)	327, 416
BtsIMutI	CAGTG	6 cut(s)	31, 327, 416, 795, 963, 1242
Cac8I	GCNNGC	2 cut(s)	1166, 1272
CfoI	GCGC	2 cut(s)	399, 1461
Cfr13I	GGNCC	4 cut(s)	1163, 1430, 1610, 1689
ClaI	ATCGAT	1 cut(s)	54
CseI	GACGC	1 cut(s)	924
CsiI	ACCWGGT	2 cut(s)	709, 817
Csp6I	GTAC	5 cut(s)	325, 863, 1615, 1792, 1839
CspCI	CAANNNNNGTGG	2 cut(s)	171, 206
CviQI	GTAC	5 cut(s)	325, 863, 1615, 1792, 1839
DraI	TTTAAA	1 cut(s)	1564
DraIII	CACNNNGTG	1 cut(s)	333
DrdI	GACNNNNNNGTC	1 cut(s)	2165
DriI	GACNNNNNGTC	1 cut(s)	900
DseDI	GACNNNNNNGTC	1 cut(s)	2165
Eam1104I	CTCTTC	2 cut(s)	1219, 1318
Eam1105I	GACNNNNNGTC	1 cut(s)	900
EarI	CTCTTC	2 cut(s)	1219, 1318
Ecl136II	GAGCTC	1 cut(s)	719
Eco130I	CCWWGG	3 cut(s)	994, 1099, 1995
Eco24I	GRGCYC	3 cut(s)	721, 832, 1577
Eco32I	GATATC	1 cut(s)	360
Eco47I	GGWCC	2 cut(s)	1430, 1689
Eco53kI	GAGCTC	1 cut(s)	719
Eco57I	CTGAAG	1 cut(s)	1200
EcoICRI	GAGCTC	1 cut(s)	719
EcoO109I	RGGNCCY	2 cut(s)	1430, 1689
EcoRII	CCWGG	6 cut(s)	24, 709, 817, 883, 2013, 2163
EcoRV	GATATC	1 cut(s)	360
EcoT14I	CCWWGG	3 cut(s)	994, 1099, 1995
EcoT22I	ATGCAT	1 cut(s)	1900
EcoT38I	GRGCYC	3 cut(s)	721, 832, 1577
ErhI	CCWWGG	3 cut(s)	994, 1099, 1995
FalI	AAGNNNNNCTT	4 cut(s)	633, 665, 2124, 2156
FaqI	GGGAC	4 cut(s)	907, 1254, 1416, 1702
FauI	CCCGC	3 cut(s)	10, 1173, 1441
FauNDI	CATATG	1 cut(s)	217
FbaI	TGATCA	2 cut(s)	1015, 2119
FblI	GTMKAC	1 cut(s)	706
Fnu4HI	GCNGC	8 cut(s)	76, 381, 636, 645, 737, 1387, 1437, 1815
FriOI	GRGCYC	3 cut(s)	721, 832, 1577
Fsp4HI	GCNGC	8 cut(s)	76, 381, 636, 645, 737, 1387, 1437, 1815
FspAI	RTGCGCAY	1 cut(s)	398
FspI	TGCGCA	1 cut(s)	398
GlaI	GCGC	2 cut(s)	398, 1460
GluI	GCNGC	8 cut(s)	76, 381, 636, 645, 737, 1387, 1437, 1815
GsuI	CTGGAG	1 cut(s)	225
HaeIII	GGCC	2 cut(s)	1164, 1611
HapII	CCGG	1 cut(s)	1743
HgaI	GACGC	1 cut(s)	924
HhaI	GCGC	2 cut(s)	399, 1461
Hin6I	GCGC	2 cut(s)	397, 1459
HinP1I	GCGC	2 cut(s)	397, 1459
HincII	GTYRAC	1 cut(s)	707
HindII	GTYRAC	1 cut(s)	707
HindIII	AAGCTT	3 cut(s)	692, 1558, 1583
HpaII	CCGG	1 cut(s)	1743
HphI	GGTGA	4 cut(s)	1220, 1401, 1569, 2129
Hpy166II	GTNNAC	6 cut(s)	31, 327, 338, 683, 707, 1794
Hpy8I	GTNNAC	6 cut(s)	31, 327, 338, 683, 707, 1794
Hpy99I	CGWCG	2 cut(s)	426, 726
HpyCH4III	ACNGT	2 cut(s)	146, 967
HpyCH4IV	ACGT	1 cut(s)	2074
HpyCH4V	TGCA	9 cut(s)	98, 638, 739, 946, 977, 1055, 1817, 1884, 1898
HpyF10VI	GCNNNNNNNGC	8 cut(s)	173, 389, 641, 644, 1717, 1890, 1997, 2033
HpySE526I	ACGT	1 cut(s)	2074
HspAI	GCGC	2 cut(s)	397, 1459
KflI	GGGWCCC	2 cut(s)	1430, 1689
Ksp22I	TGATCA	2 cut(s)	1015, 2119
LguI	GCTCTTC	1 cut(s)	1318
LmnI	GCTCC	3 cut(s)	194, 716, 1665
Lsp1109I	GCAGC	6 cut(s)	367, 622, 656, 723, 1423, 1801
LweI	GCATC	7 cut(s)	85, 235, 610, 723, 955, 1234, 2146
MabI	ACCWGGT	2 cut(s)	709, 817
MaeII	ACGT	1 cut(s)	2074
MaeIII	GTNAC	4 cut(s)	668, 821, 1407, 1806
MboII	GAAGA	8 cut(s)	49, 58, 545, 1206, 1305, 1760, 2078, 2132
MfeI	CAATTG	1 cut(s)	1863
MflI	RGATCY	5 cut(s)	514, 1049, 1103, 1139, 1355
MhlI	GDGCHC	4 cut(s)	721, 832, 1498, 1577
MlyI	GAGTC	5 cut(s)	1015, 1183, 1192, 1415, 2183
MmeI	TCCRAC	5 cut(s)	929, 1211, 1333, 2166, 2172
Mph1103I	ATGCAT	1 cut(s)	1900
MslI	CAYNNNNRTG	2 cut(s)	216, 1347
MspA1I	CMGCKG	2 cut(s)	17, 1436
MspCI	CTTAAG	1 cut(s)	650
MspI	CCGG	1 cut(s)	1743
MspR9I	CCNGG	7 cut(s)	26, 711, 819, 885, 1744, 2015, 2165
MunI	CAATTG	1 cut(s)	1863
MvaI	CCWGG	6 cut(s)	26, 711, 819, 885, 2015, 2165
MwoI	GCNNNNNNNGC	8 cut(s)	173, 389, 641, 644, 1717, 1890, 1997, 2033
NciI	CCSGG	1 cut(s)	1744
NcoI	CCATGG	1 cut(s)	994
NdeI	CATATG	1 cut(s)	217
NlaIV	GGNNCC	7 cut(s)	516, 796, 1105, 1431, 1432, 1690, 1691
NmuCI	GTSAC	2 cut(s)	668, 1407
NsbI	TGCGCA	1 cut(s)	398
NsiI	ATGCAT	1 cut(s)	1900
NspI	RCATGY	3 cut(s)	124, 1274, 1540
PaeI	GCATGC	1 cut(s)	1274
PciI	ACATGT	1 cut(s)	1536
PciSI	GCTCTTC	1 cut(s)	1318
PcsI	WCGNNNNNNNCGW	1 cut(s)	382
PfeI	GAWTC	6 cut(s)	275, 745, 767, 2010, 2086, 2195
Pfl23II	CGTACG	1 cut(s)	1614
PflMI	CCANNNNNTGG	2 cut(s)	1237, 2216
PkrI	GCNGC	8 cut(s)	77, 382, 637, 646, 738, 1388, 1438, 1816
PleI	GAGTC	5 cut(s)	1014, 1183, 1191, 1414, 2183
PpsI	GAGTC	5 cut(s)	1014, 1183, 1191, 1414, 2183
PpuMI	RGGWCCY	2 cut(s)	1430, 1689
PscI	ACATGT	1 cut(s)	1536
PshAI	GACNNNNGTC	1 cut(s)	540
PshBI	ATTAAT	2 cut(s)	483, 1766
Psp124BI	GAGCTC	1 cut(s)	721
Psp1406I	AACGTT	1 cut(s)	2074
Psp5II	RGGWCCY	2 cut(s)	1430, 1689
Psp6I	CCWGG	6 cut(s)	24, 709, 817, 883, 2013, 2163
PspGI	CCWGG	6 cut(s)	24, 709, 817, 883, 2013, 2163
PspLI	CGTACG	1 cut(s)	1614
PspN4I	GGNNCC	7 cut(s)	516, 796, 1105, 1431, 1432, 1690, 1691
PspPI	GGNCC	4 cut(s)	1163, 1430, 1610, 1689
PspPPI	RGGWCCY	2 cut(s)	1430, 1689
PstI	CTGCAG	1 cut(s)	640
PsuI	RGATCY	5 cut(s)	514, 1049, 1103, 1139, 1355
RsaI	GTAC	5 cut(s)	326, 864, 1616, 1793, 1840
RsaNI	GTAC	5 cut(s)	325, 863, 1615, 1792, 1839
RseI	CAYNNNNRTG	2 cut(s)	216, 1347
SacI	GAGCTC	1 cut(s)	721
SalI	GTCGAC	1 cut(s)	705
SapI	GCTCTTC	1 cut(s)	1318
SatI	GCNGC	8 cut(s)	76, 381, 636, 645, 737, 1387, 1437, 1815
Sau96I	GGNCC	4 cut(s)	1163, 1430, 1610, 1689
SchI	GAGTC	5 cut(s)	1015, 1183, 1192, 1415, 2183
ScrFI	CCNGG	7 cut(s)	26, 711, 819, 885, 1744, 2015, 2165
SduI	GDGCHC	4 cut(s)	721, 832, 1498, 1577
SexAI	ACCWGGT	2 cut(s)	709, 817
SfaNI	GCATC	7 cut(s)	85, 235, 610, 723, 955, 1234, 2146
SfcI	CTRYAG	1 cut(s)	636
SinI	GGWCC	2 cut(s)	1430, 1689
SmiMI	CAYNNNNRTG	2 cut(s)	216, 1347
SmlI	CTYRAG	2 cut(s)	650, 1132
SmoI	CTYRAG	2 cut(s)	650, 1132
SphI	GCATGC	1 cut(s)	1274
SsiI	CCGC	5 cut(s)	17, 75, 1166, 1387, 1434
SspI	AATATT	2 cut(s)	549, 1780
SstI	GAGCTC	1 cut(s)	721
StyD4I	CCNGG	7 cut(s)	24, 709, 817, 883, 1742, 2013, 2163
StyI	CCWWGG	3 cut(s)	994, 1099, 1995
TaaI	ACNGT	2 cut(s)	146, 967
TaiI	ACGT	1 cut(s)	2077
TaqI	TCGA	9 cut(s)	54, 270, 385, 706, 724, 781, 1756, 1799, 2008
TaqII	GACCGA	1 cut(s)	2159
TatI	WGTACW	2 cut(s)	324, 1791
TauI	GCSGC	2 cut(s)	78, 1389
TfiI	GAWTC	6 cut(s)	275, 745, 767, 2010, 2086, 2195
TscAI	CASTG	6 cut(s)	38, 334, 423, 795, 970, 1242
TseFI	GTSAC	2 cut(s)	668, 1407
TseI	GCWGC	6 cut(s)	380, 635, 644, 736, 1436, 1814
Tsp45I	GTSAC	2 cut(s)	668, 1407
TspDTI	ATGAA	8 cut(s)	546, 780, 1364, 1839, 2075, 2079, 2084, 2187
TspGWI	ACGGA	4 cut(s)	439, 530, 880, 1062
TspRI	CASTG	6 cut(s)	38, 334, 423, 795, 970, 1242
Van91I	CCANNNNNTGG	2 cut(s)	1237, 2216
Vha464I	CTTAAG	1 cut(s)	650
VpaK11BI	GGWCC	2 cut(s)	1430, 1689
VspI	ATTAAT	2 cut(s)	483, 1766
XapI	RAATTY	3 cut(s)	608, 1474, 2047
XceI	RCATGY	3 cut(s)	124, 1274, 1540
XcmI	CCANNNNNNNNNTGG	1 cut(s)	822
XmiI	GTMKAC	1 cut(s)	706
Zsp2I	ATGCAT	1 cut(s)	1900

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.