Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001229

Physical Location & Seq

Genomic Coordinates Reverse (-)

85466884 .. 85472906

Gene Structure 6023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00063670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGAGTCAACCTTGGAACTTTTCATCTTCTGGTTCTACTAAAACTCAGATGGTCGGTAGAGGAGCATGGGGGATTTTATCTGGATCTGATGCCCACCATACCTCAAGTGATGCTACCCTTTTCTCAAGCTCATTACCCCTACTTCCTCATCCAAAGTTGAACTTGAATGATGCGGAAAATGGCCGCCAATCTATTGATGATCTCTCGTCTAGCTTAAAGAAACTCCATCAAAATTTGGAGGGTAATGATCCAATTGATGATATTGAAACTCATGCAATTGGTAGCTTGCTTCCTGGGGATGAGGTGGAGCTTTTAGCTGGCATAGCGGATGATCTTGACCTCACTGGGTTGCCTGGGTCCCTGGAAGACTTGGAGGAGTATGATCTCTTTGGTAGTGGAGGTGGCATGGAATTGGAAAGCGATCCACAGGATAGTCTGAGAATTGGCATTTCAAAAGTAAGTTTATCTGATGGTTCTATGGGGAATGGGATGCTTAATTCTGCCCTTTCAAACGGTGTGGGAACTGTTGCCGGAGAACATCCATATGGCGAGCATCCCTCCAGAACACTGTTTGTGCGAAATATCAACAGTAATGTTGAGGATTCAGAACTAAGAGCACTTTTTGAGCAATATGGCGATATTAGAACACTGTACACTGCATGTAAACATAGGGGCTTTGTGATGATATCTTATTATGATATTCGTGCTGCTCGAACTGCTATGCGTGTGTTACAAAACAAGCCACTGCGACGGAGGAAACTTGATATTCATTTTTCAATACCGAAGGATAACCCATCAGAGAAGGACGTTAATCAAGGGACCTTGGTAGTTTTTAATTTGGATCCATCAGTTTCAAATGAAGACCTCCTTCAAATATTTGGGGCTTATGGTGAGGTCAAAGAGATAAGGGAAACACCGCATAAGAGACACCATAAGTTTATTGAGTACTATGATGTCAGAGCTGCAGAAGCAGCACTTAAGTCATTAAATAGGAGTGACATAGCTGGTAAACGCATAAAATTGGAACCCAGTCGCCCTGGAGGAGCTCGTCGAAAGTGCCCCAGGAAGGGGGGTATTTCAAATCATATCTTTACAAATACAAACTCAGCACATGGATCTGCATTTCAACAATCACATTCAGTTCCAGAGCCACAGTTAAGCCATTTCCATGGCACATTGCACTCCTCTGGACCTTCAACTTCAAGTGGATCATCAGTTGTGGAAACATTATCAGGTCCACAATTTCTTTGGGGAAGTCCAACTGTTGAAAAAACCAATTCTTCTGTTTGGCCTCAGAAAGCAGTGGGACATCAACTTGCATCGAATGGGAAGGGGCATCCCCATCCATTCTCAGGTCCTCATAGCTCTTTCCTCAGCTCATCCCCTCACCATCATCATGTTGGATCTGCTCCATCTGGCATTCCATTTGACAGGCACTTTAGTTATGTCCCAGAGTCGGCAGAAACTTCATATTTGAGTCCTGTTGCCTATGGAGGCATGGGATTAGGCCCCAGTGGTGGAAATTTTAGGATTAATAGGGGCACTCATACCGCTACAAATGTTGGCTTTTCCATACCAGGAAGTGTGCCTGAAAGTAGTTCCTCCAGTTTTAAAATGATGTCCTCACCGAAGCTTAGCCCCGTGTTTTTAGGTAATGGGCCATACATGGGACTGCCTCCTACAAGCATTGATGGTTTGACTGAGCGTGGGAGGAGCAGACGAGTTGAGAATAATGGGAACCAGATTGATAGCAAGAAACAGTTTCAACTTGATTTGGATAAGATTGTCAGCGGGGAAGATACCCGAACAACATTAATGATAAAAAATATCCCAAATAAGTACACCTCAAAAATGCTACTTGCTGCAATAGATGAAAATCACAAGGGTACTTATGATTTTCTCTATCTTCCAATTGATTTTAAGAATAAGTGCAACGTGGGCTATGCATTTATCAATATGCTGTCTCCTTCACACATCATCCCATTTTATGAGGCATTCAATGGAAAGAAATGGGAGAAGTTTAATAGTGAGAAAGTTGCTTCTTTGGCTTATGGGCGAATCCAGGGGAAGGCAGCTCTTGTGACCCATTTTCAAAATTCAAGCCTAATGAATGAAGACAAACGCTGTCGCCCGATTCTCTTTATCTCAGAGAGTTCAGAGGCTGGTGATCAGATCATCCAGGAACATCTTCCCTCCAATAATTTGAACATCCAGGTTTCTCAGCCAAAGGAGTCAGACATTGGTGCATCAGGAAGCCCGGAGTCTGGCGGGTTTGATGAGAACAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008150 GO:0010564 GO:0010638 GO:0033043 GO:0040008 GO:0040020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045787 GO:0045836 GO:0045927 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051445 GO:0051446 GO:0051726 GO:0051783 GO:0051785 GO:0065007 GO:0090068 GO:0097159 GO:1901363 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

763

Amino Acids

83.08

Weight (kDa)

6.41

Isoelectric Point (pI)

46.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	190 - 254	1.3e-09	RNA recognition motif
RRM_5	PF13893	271 - 353	6.8e-07	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_1	PF00076	275 - 340	2.5e-11	RNA recognition motif
RRM_2	PF04059	602 - 698	2.9e-54	RNA recognition motif 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001229)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29400 AT1G29400 AT1G29400
fragaria_vesca	FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250
malus_domestica	MD05G1291700.v1.1 MD09G1151600.v1.1 MD10G1267700.v1.1 MD17G1139300.v1.1
prunus_persica	Prupe.3G172900_v2.0.a1 Prupe.4G073800_v2.0.a1
pyrus_communis	pycom05g26820 pycom09g07120 pycom10g22380 pycom17g13240
rosa_chinensis	RchiOBHm_Chr2g0151511 RchiOBHm_Chr5g0012911
rosa_laevigata	RLG00000020556 RLG00000031968
rosa_multiflora	Rmu_sc0000940.1_g000021 Rmu_sc0016318.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063670 Rroxscaffold_2G00096390
rosa_rugosa	Rorug02G0426600 Rorug02G0426700 Rorug02G0426800 Rorug05G0005100 Rorug05G0005100 Rorug05G0005100
rosa_samantha	Rh2AG487500 Rh2BG499900 Rh2CG474000 Rh2DG511100 Rh5AG099400 Rh5BG096000 Rh5CG108300 Rh5DG094700
rosa_wichuraiana	Rw2G039960 Rw5G008680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	7 cut(s)	173, 184, 326, 917, 1551, 1791, 2268
AclWI	GGATC	8 cut(s)	91, 242, 416, 836, 849, 1123, 1216, 1411
AcoI	YGGCCR	1 cut(s)	181
AcsI	RAATTY	3 cut(s)	232, 1522, 2095
AfaI	GTAC	4 cut(s)	653, 947, 1841, 1888
AfiI	CCNNNNNNNGG	9 cut(s)	1066, 1067, 1068, 1352, 1456, 1517, 1667, 2068, 2264
AflII	CTTAAG	1 cut(s)	977
AjnI	CCWGG	9 cut(s)	292, 352, 360, 1036, 1061, 1576, 2061, 2178, 2211
Alw21I	GWGCWC	2 cut(s)	619, 1048
Alw26I	GTCTC	2 cut(s)	919, 1968
AlwI	GGATC	8 cut(s)	91, 242, 416, 836, 849, 1123, 1216, 1411
AlwNI	CAGNNNCTG	1 cut(s)	2162
AoxI	GGCC	4 cut(s)	181, 1289, 1507, 1658
ApeKI	GCWGC	5 cut(s)	707, 962, 971, 1862, 2072
ApoI	RAATTY	3 cut(s)	232, 1522, 2095
AseI	ATTAAT	2 cut(s)	1533, 1814
Asp700I	GAANNNNTTC	1 cut(s)	2187
AspS9I	GGNCC	7 cut(s)	357, 819, 1190, 1235, 1355, 1508, 1658
AsuC2I	CCSGG	1 cut(s)	2258
AsuHPI	GGTGA	4 cut(s)	902, 1379, 1617, 2177
AvaII	GGWCC	5 cut(s)	357, 819, 1190, 1235, 1355
BaeGI	GKGCMC	2 cut(s)	1061, 1544
BamHI	GGATCC	1 cut(s)	841
BanII	GRGCYC	1 cut(s)	1048
BbsI	GAAGAC	3 cut(s)	372, 867, 2121
Bbv12I	GWGCWC	2 cut(s)	619, 1048
BbvCI	CCTCAGC	1 cut(s)	1373
BbvI	GCAGC	5 cut(s)	694, 949, 983, 1849, 2084
BccI	CCATC	9 cut(s)	43, 234, 464, 802, 853, 1350, 1398, 1420, 1685
BciT130I	CCWGG	9 cut(s)	294, 354, 362, 1038, 1063, 1578, 2063, 2180, 2213
BclI	TGATCA	1 cut(s)	2167
BcnI	CCSGG	1 cut(s)	2258
BcoDI	GTCTC	2 cut(s)	919, 1968
BfaI	CTAG	1 cut(s)	210
BfmI	CTRYAG	1 cut(s)	963
BfrI	CTTAAG	1 cut(s)	977
BisI	GCNGC	6 cut(s)	184, 708, 963, 972, 1863, 2073
BlpI	GCTNAGC	1 cut(s)	1634
BlsI	GCNGC	6 cut(s)	185, 709, 964, 973, 1864, 2074
BmcAI	AGTACT	1 cut(s)	947
Bme18I	GGWCC	5 cut(s)	357, 819, 1190, 1235, 1355
BmgT120I	GGNCC	7 cut(s)	357, 819, 1190, 1235, 1355, 1508, 1658
BmiI	GGNNCC	7 cut(s)	358, 359, 820, 843, 1026, 1510, 1739
BmrI	ACTGGG	3 cut(s)	354, 1023, 1506
BmsI	GCATC	8 cut(s)	79, 100, 160, 480, 562, 1328, 1345, 2255
BmuI	ACTGGG	3 cut(s)	354, 1023, 1506
BpiI	GAAGAC	3 cut(s)	372, 867, 2121
BplI	GAGNNNNNCTC	2 cut(s)	542, 574
BpmI	CTGGAG	3 cut(s)	544, 1059, 1588
Bpu10I	CCTNAGC	1 cut(s)	1373
Bpu1102I	GCTNAGC	1 cut(s)	1634
BpuEI	CTTGAG	2 cut(s)	88, 109
BpuMI	CCSGG	1 cut(s)	2258
BsaBI	GATNNNNATC	1 cut(s)	1875
BsaJI	CCNNGG	9 cut(s)	11, 293, 353, 360, 822, 1036, 1061, 1168, 2062
Bsc4I	CCNNNNNNNGG	9 cut(s)	1066, 1067, 1068, 1352, 1456, 1517, 1667, 2068, 2264
Bse1I	ACTGG	4 cut(s)	349, 1029, 1512, 1605
Bse3DI	GCAATG	1 cut(s)	1175
Bse8I	GATNNNNATC	1 cut(s)	1875
BseBI	CCWGG	9 cut(s)	294, 354, 362, 1038, 1063, 1578, 2063, 2180, 2213
BseDI	CCNNGG	9 cut(s)	11, 293, 353, 360, 822, 1036, 1061, 1168, 2062
BseJI	GATNNNNATC	1 cut(s)	1875
BseLI	CCNNNNNNNGG	9 cut(s)	1066, 1067, 1068, 1352, 1456, 1517, 1667, 2068, 2264
BseMI	GCAATG	1 cut(s)	1175
BseMII	CTCAG	9 cut(s)	59, 428, 1119, 1307, 1365, 1387, 1692, 2160, 2234
BseNI	ACTGG	4 cut(s)	349, 1029, 1512, 1605
BseRI	GAGGAG	5 cut(s)	75, 389, 1056, 1174, 1726
BseSI	GKGCMC	2 cut(s)	1061, 1544
BseXI	GCAGC	5 cut(s)	694, 949, 983, 1849, 2084
BshFI	GGCC	4 cut(s)	183, 1291, 1509, 1660
BsiHKAI	GWGCWC	2 cut(s)	619, 1048
BsiSI	CCGG	2 cut(s)	531, 2258
BslFI	GGGAC	5 cut(s)	343, 832, 1320, 1433, 1683
BslI	CCNNNNNNNGG	9 cut(s)	1066, 1067, 1068, 1352, 1456, 1517, 1667, 2068, 2264
BsmAI	GTCTC	2 cut(s)	919, 1968
BsmFI	GGGAC	5 cut(s)	343, 832, 1320, 1433, 1683
BsmI	GAATGC	2 cut(s)	1419, 1994
BsnI	GGCC	4 cut(s)	183, 1291, 1509, 1660
Bsp1286I	GDGCHC	4 cut(s)	619, 1048, 1061, 1544
Bsp1407I	TGTACA	1 cut(s)	651
Bsp1720I	GCTNAGC	1 cut(s)	1634
Bsp19I	CCATGG	1 cut(s)	1168
BspACI	CCGC	7 cut(s)	173, 184, 326, 917, 1551, 1791, 2268
BspANI	GGCC	4 cut(s)	183, 1291, 1509, 1660
BspCNI	CTCAG	9 cut(s)	58, 429, 1118, 1306, 1364, 1386, 1693, 2159, 2233
BspLI	GGNNCC	7 cut(s)	358, 359, 820, 843, 1026, 1510, 1739
BspMAI	CTGCAG	1 cut(s)	967
BspPI	GGATC	8 cut(s)	91, 242, 416, 836, 849, 1123, 1216, 1411
BspTI	CTTAAG	1 cut(s)	977
BsrDI	GCAATG	1 cut(s)	1175
BsrGI	TGTACA	1 cut(s)	651
BsrI	ACTGG	4 cut(s)	349, 1029, 1512, 1605
BssECI	CCNNGG	9 cut(s)	11, 293, 353, 360, 822, 1036, 1061, 1168, 2062
BssT1I	CCWWGG	3 cut(s)	11, 822, 1168
Bst2UI	CCWGG	9 cut(s)	294, 354, 362, 1038, 1063, 1578, 2063, 2180, 2213
Bst4CI	ACNGT	8 cut(s)	515, 526, 570, 590, 651, 1155, 1264, 1761
BstAFI	CTTAAG	1 cut(s)	977
BstAUI	TGTACA	1 cut(s)	651
BstC8I	GCNNGC	3 cut(s)	287, 319, 551
BstDSI	CCRYGG	1 cut(s)	1168
BstMAI	GTCTC	2 cut(s)	919, 1968
BstMWI	GCNNNNNNNGC	6 cut(s)	323, 716, 968, 971, 1938, 2045
BstNI	CCWGG	9 cut(s)	294, 354, 362, 1038, 1063, 1578, 2063, 2180, 2213
BstNSI	RCATGY	1 cut(s)	663
BstSFI	CTRYAG	1 cut(s)	963
BstSLI	GKGCMC	2 cut(s)	1061, 1544
BstV1I	GCAGC	5 cut(s)	694, 949, 983, 1849, 2084
BstV2I	GAAGAC	3 cut(s)	372, 867, 2121
BstX2I	RGATCY	4 cut(s)	83, 841, 1115, 1403
BstXI	CCANNNNNNTGG	1 cut(s)	1169
BstYI	RGATCY	4 cut(s)	83, 841, 1115, 1403
BsuRI	GGCC	4 cut(s)	183, 1291, 1509, 1660
BtgI	CCRYGG	1 cut(s)	1168
BtsI	GCAGTG	3 cut(s)	654, 743, 1308
BtsIMutI	CAGTG	7 cut(s)	342, 566, 647, 654, 743, 1308, 1519
Cac8I	GCNNGC	3 cut(s)	287, 319, 551
CaiI	CAGNNNCTG	1 cut(s)	2162
Cfr13I	GGNCC	7 cut(s)	357, 819, 1190, 1235, 1355, 1508, 1658
Csp6I	GTAC	4 cut(s)	652, 946, 1840, 1887
CspCI	CAANNNNNGTGG	2 cut(s)	498, 533
CviAII	CATG	9 cut(s)	66, 272, 406, 660, 1112, 1169, 1397, 1498, 1666
CviQI	GTAC	4 cut(s)	652, 946, 1840, 1887
DraI	TTTAAA	1 cut(s)	1612
EaeI	YGGCCR	1 cut(s)	181
Ecl136II	GAGCTC	1 cut(s)	1046
Eco130I	CCWWGG	3 cut(s)	11, 822, 1168
Eco24I	GRGCYC	1 cut(s)	1048
Eco32I	GATATC	1 cut(s)	687
Eco47I	GGWCC	5 cut(s)	357, 819, 1190, 1235, 1355
Eco53kI	GAGCTC	1 cut(s)	1046
EcoICRI	GAGCTC	1 cut(s)	1046
EcoO109I	RGGNCCY	4 cut(s)	357, 819, 1355, 1508
EcoRII	CCWGG	9 cut(s)	292, 352, 360, 1036, 1061, 1576, 2061, 2178, 2211
EcoRV	GATATC	1 cut(s)	687
EcoT14I	CCWWGG	3 cut(s)	11, 822, 1168
EcoT22I	ATGCAT	1 cut(s)	1948
EcoT38I	GRGCYC	1 cut(s)	1048
ErhI	CCWWGG	3 cut(s)	11, 822, 1168
FaeI	CATG	9 cut(s)	69, 275, 409, 663, 1115, 1172, 1400, 1501, 1669
FalI	AAGNNNNNCTT	6 cut(s)	146, 178, 852, 884, 960, 992
FaqI	GGGAC	5 cut(s)	343, 832, 1320, 1433, 1683
FatI	CATG	9 cut(s)	65, 271, 405, 659, 1111, 1168, 1396, 1497, 1665
FauI	CCCGC	2 cut(s)	1784, 2261
FauNDI	CATATG	1 cut(s)	544
FbaI	TGATCA	1 cut(s)	2167
Fnu4HI	GCNGC	6 cut(s)	184, 708, 963, 972, 1863, 2073
FriOI	GRGCYC	1 cut(s)	1048
Fsp4HI	GCNGC	6 cut(s)	184, 708, 963, 972, 1863, 2073
FspBI	CTAG	1 cut(s)	210
GluI	GCNGC	6 cut(s)	184, 708, 963, 972, 1863, 2073
GsuI	CTGGAG	3 cut(s)	544, 1059, 1588
HaeIII	GGCC	4 cut(s)	183, 1291, 1509, 1660
HapII	CCGG	2 cut(s)	531, 2258
Hin1II	CATG	9 cut(s)	69, 275, 409, 663, 1115, 1172, 1400, 1501, 1669
HincII	GTYRAC	1 cut(s)	8
HindII	GTYRAC	1 cut(s)	8
HindIII	AAGCTT	1 cut(s)	1631
HinfI	GANTC	8 cut(s)	4, 602, 1454, 1477, 2058, 2134, 2231, 2261
HpaII	CCGG	2 cut(s)	531, 2258
HphI	GGTGA	4 cut(s)	902, 1379, 1617, 2177
Hpy166II	GTNNAC	6 cut(s)	8, 654, 665, 1010, 1238, 1842
Hpy188III	TCNNGA	6 cut(s)	81, 335, 561, 1145, 1188, 2250
Hpy8I	GTNNAC	6 cut(s)	8, 654, 665, 1010, 1238, 1842
Hpy99I	CGWCG	2 cut(s)	753, 1053
HpyAV	CCTTC	8 cut(s)	778, 796, 878, 1060, 1203, 1324, 1977, 2062
HpyCH4III	ACNGT	8 cut(s)	515, 526, 570, 590, 651, 1155, 1264, 1761
HpyCH4IV	ACGT	2 cut(s)	807, 1935
HpyF10VI	GCNNNNNNNGC	6 cut(s)	323, 716, 968, 971, 1938, 2045
HpySE526I	ACGT	2 cut(s)	807, 1935
Hsp92II	CATG	9 cut(s)	69, 275, 409, 663, 1115, 1172, 1400, 1501, 1669
KflI	GGGWCCC	1 cut(s)	357
Ksp22I	TGATCA	1 cut(s)	2167
LmnI	GCTCC	5 cut(s)	62, 307, 1043, 1414, 1713
Lsp1109I	GCAGC	5 cut(s)	694, 949, 983, 1849, 2084
LweI	GCATC	8 cut(s)	79, 100, 160, 480, 562, 1328, 1345, 2255
MaeI	CTAG	1 cut(s)	210
MaeII	ACGT	2 cut(s)	807, 1935
MaeIII	GTNAC	3 cut(s)	729, 995, 2080
MboII	GAAGA	8 cut(s)	18, 377, 872, 1272, 1808, 1898, 2126, 2180
MfeI	CAATTG	3 cut(s)	252, 276, 1911
MflI	RGATCY	4 cut(s)	83, 841, 1115, 1403
MhlI	GDGCHC	4 cut(s)	619, 1048, 1061, 1544
MlyI	GAGTC	5 cut(s)	13, 1463, 1486, 2240, 2270
MmeI	TCCRAC	2 cut(s)	1283, 1381
Mph1103I	ATGCAT	1 cut(s)	1948
MroXI	GAANNNNTTC	1 cut(s)	2187
MslI	CAYNNNNRTG	3 cut(s)	543, 1167, 1395
MspA1I	CMGCKG	1 cut(s)	1791
MspCI	CTTAAG	1 cut(s)	977
MspI	CCGG	2 cut(s)	531, 2258
MunI	CAATTG	3 cut(s)	252, 276, 1911
Mva1269I	GAATGC	2 cut(s)	1419, 1994
MvaI	CCWGG	9 cut(s)	294, 354, 362, 1038, 1063, 1578, 2063, 2180, 2213
MwoI	GCNNNNNNNGC	6 cut(s)	323, 716, 968, 971, 1938, 2045
NciI	CCSGG	1 cut(s)	2258
NcoI	CCATGG	1 cut(s)	1168
NdeI	CATATG	1 cut(s)	544
NlaIII	CATG	9 cut(s)	69, 275, 409, 663, 1115, 1172, 1400, 1501, 1669
NlaIV	GGNNCC	7 cut(s)	358, 359, 820, 843, 1026, 1510, 1739
NmuCI	GTSAC	2 cut(s)	995, 2080
NsiI	ATGCAT	1 cut(s)	1948
NspI	RCATGY	1 cut(s)	663
PcsI	WCGNNNNNNNCGW	1 cut(s)	709
PctI	GAATGC	2 cut(s)	1419, 1994
PdmI	GAANNNNTTC	1 cut(s)	2187
PfeI	GAWTC	3 cut(s)	602, 2058, 2134
PfoI	TCCNGGA	1 cut(s)	2178
PkrI	GCNGC	6 cut(s)	185, 709, 964, 973, 1864, 2074
PleI	GAGTC	5 cut(s)	12, 1462, 1485, 2239, 2269
PpsI	GAGTC	5 cut(s)	12, 1462, 1485, 2239, 2269
PpuMI	RGGWCCY	3 cut(s)	357, 819, 1355
PshBI	ATTAAT	2 cut(s)	1533, 1814
Psp124BI	GAGCTC	1 cut(s)	1048
Psp5II	RGGWCCY	3 cut(s)	357, 819, 1355
Psp6I	CCWGG	9 cut(s)	292, 352, 360, 1036, 1061, 1576, 2061, 2178, 2211
PspGI	CCWGG	9 cut(s)	292, 352, 360, 1036, 1061, 1576, 2061, 2178, 2211
PspN4I	GGNNCC	7 cut(s)	358, 359, 820, 843, 1026, 1510, 1739
PspPI	GGNCC	7 cut(s)	357, 819, 1190, 1235, 1355, 1508, 1658
PspPPI	RGGWCCY	3 cut(s)	357, 819, 1355
PstI	CTGCAG	1 cut(s)	967
PstNI	CAGNNNCTG	1 cut(s)	2162
PsuI	RGATCY	4 cut(s)	83, 841, 1115, 1403
RsaI	GTAC	4 cut(s)	653, 947, 1841, 1888
RsaNI	GTAC	4 cut(s)	652, 946, 1840, 1887
RseI	CAYNNNNRTG	3 cut(s)	543, 1167, 1395
SacI	GAGCTC	1 cut(s)	1048
SatI	GCNGC	6 cut(s)	184, 708, 963, 972, 1863, 2073
Sau96I	GGNCC	7 cut(s)	357, 819, 1190, 1235, 1355, 1508, 1658
ScaI	AGTACT	1 cut(s)	947
SchI	GAGTC	5 cut(s)	13, 1463, 1486, 2240, 2270
SduI	GDGCHC	4 cut(s)	619, 1048, 1061, 1544
SfaNI	GCATC	8 cut(s)	79, 100, 160, 480, 562, 1328, 1345, 2255
SfcI	CTRYAG	1 cut(s)	963
SinI	GGWCC	5 cut(s)	357, 819, 1190, 1235, 1355
SmiMI	CAYNNNNRTG	3 cut(s)	543, 1167, 1395
SmlI	CTYRAG	3 cut(s)	103, 124, 977
SmoI	CTYRAG	3 cut(s)	103, 124, 977
SsiI	CCGC	7 cut(s)	173, 184, 326, 917, 1551, 1791, 2268
SspI	AATATT	1 cut(s)	876
SspMI	CTAG	1 cut(s)	210
SstI	GAGCTC	1 cut(s)	1048
StyI	CCWWGG	3 cut(s)	11, 822, 1168
TaaI	ACNGT	8 cut(s)	515, 526, 570, 590, 651, 1155, 1264, 1761
TaiI	ACGT	2 cut(s)	810, 1938
TaqI	TCGA	3 cut(s)	712, 1051, 1322
TatI	WGTACW	3 cut(s)	651, 945, 1839
TauI	GCSGC	1 cut(s)	186
TfiI	GAWTC	3 cut(s)	602, 2058, 2134
TscAI	CASTG	7 cut(s)	349, 573, 654, 661, 750, 1308, 1519
TseFI	GTSAC	2 cut(s)	995, 2080
TseI	GCWGC	5 cut(s)	707, 962, 971, 1862, 2072
Tsp45I	GTSAC	2 cut(s)	995, 2080
TspDTI	ATGAA	7 cut(s)	12, 758, 873, 1458, 1887, 2123, 2127
TspGWI	ACGGA	1 cut(s)	766
TspRI	CASTG	7 cut(s)	349, 573, 654, 661, 750, 1308, 1519
Vha464I	CTTAAG	1 cut(s)	977
VpaK11BI	GGWCC	5 cut(s)	357, 819, 1190, 1235, 1355
VspI	ATTAAT	2 cut(s)	1533, 1814
XapI	RAATTY	3 cut(s)	232, 1522, 2095
XceI	RCATGY	1 cut(s)	663
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1245, 1397
XmnI	GAANNNNTTC	1 cut(s)	2187
XspI	CTAG	1 cut(s)	210
ZrmI	AGTACT	1 cut(s)	947
Zsp2I	ATGCAT	1 cut(s)	1948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.