Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0001229

Physical Location & Seq

Genomic Coordinates Reverse (-)

5301554 .. 5305834

Gene Structure 4281 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g07120.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGCTTCCTGATGATGAAGATGATCTCTTAGCAGGCATAACAGATGATTTTGATCTAAGTCGATTGCCTAATCAGCTGGAGGAGATGGAAGAGTATGATCTGTTTGGAAGTGGAGGTGGAATGGAATTGGATTTTGAATCCCAGGATAGCCTCGGTATTGGCATGTCAAAACTAGGCATATCTGATGGGGTTGTTCCAAATGGGATTGGTCATTATGCTCTTCCAAATGGTGTTGGAGCTGTGGCTGGGGAGCACCCGTATGGAGAGCATCCATCTAGAACCTTGTTTGTTAGAAATATCAACAGTAACGTCGAGGACTCTGAGTTGAGAGCTCTATTTGAGCAATTTGGGGATATCAGAACTTTATACACTGCATGCAAGCACAGGGGCTTCGTGATGATATCTTACTACGACATCCGAGCCGCTCGCACTGCAATGCGTGCGTTACAGAACAAGCCCTTGAGACGGAGGAAACTCGACATTCATTTTTCTATTCCCAAGGACAACCCTTCAGAAAAGGATATCAACCAAGGAACTCTTGTGGTGTTCAACTTGGATGCATCAGTGTCAAATGATGACCTTCGACAGATATTTGGGGCTTATGGGGAAGTCAAAGAGATCCGGGAAACCCCACACAAGAGACACCATAAATTCATAGAGTTTTATGATGTTCGAGCTGCAGAGGCAGCTTTAAGGGCATTAAATAGGAGTGACATAGCTGGGAAACGCATAAAGCTCGAACCCAGCCGCCCTGGTGGAGCACGTAGAAACTTGATGCAACAACTTACTCAAGAGCTTGAACAAGATGAAACTTGGAGTTTCCGACATCAAGTGGGTTCACCTGTGACCAACTCTCCTCCAGGTACCTGGGCGCATATTGGAAGCCCCATTGAGCATAACCAGTATGCTTTTAGTAAATCCCCGGGTCTGGGAAGCCTCAGTCCAGACAGCAACCATTTGCTTGGGTTAGCTTCAATTCTCCCAGCTCATTTGTCTAACTCTCCTAAGATTGCGCCTATTGGTAAGGACCAAGGAAGGGCAAACCATATAAATCCGATGTATAGCAACTCTCCATCAACACAAGGAGCAGCGCATCAGCATTCTCATTCCTATCCAGAGCAGAAATTAAGTGCAAGTCCAGGTCCCATCTCATTGGGCAAGTCAAATTCAACTTCATCAGGGATTGGAACATTGTCAGGTCCTCAGTTTCTCTGGGGCAGTCCATCTCCATCTCCTTATGCTGACCCTAGTTCTTCTGCCTGGCCAACCTTGTCTGCGGGGCATCCATTTTCATCTAGTGGACAGGGGCAAGGCTTTTCATCGACCAGCCGGCATGGCTCTTTTCTCAGTTCACACAACCATCATGTGGGATCTGCTCCATCCGGTGGTGTTCCTCTAGAGAGGCATTTTGGCTTTTTCCCAGAGTCACCAGAAACATCCTTCATGAATCCAGTGTTTGGGGGCATGGGTTTAAGTCGCAACAGTGGGAATTACATGATGAACATGGGTGGTCGTGCAACTTTGAGTGTTGGTGTTGGTCTTCCAGGAAATGTTACTGAAAATGGCTCACCTAGTTTCAGAATGATGTCAATGCCAAAGCATGGTCCTGTGTACCTTGGGAGTGGTTCATATACTGGACCGGCAGCAACCATCAGTGAGATGTTGGCTGATCATGGTAGAAGTCGGCGAATAGAGAATCCTGGGAATCAGATGGATAGTAAAAAGCAGTATCAACTTGATATAGATAAAATTATCAGTGGGGAGGATACTAGGACTACTTTAATGATAAAAAACATCCCGAATAAGTACACTTCCAAAATGCTGCTGGCTGCTATTGATGAAAACCACCGTGGTACATACGACTTTCTCTACCTGCCAATTGACTTTAAGAATAAGTGCAATGTGGGTTATGCCTTCATCAATATGGTGTCTCCTACCCACATTATAGCCTTCTATGAGGCATTAAATGGGAAGAAGTGGGAGAAATTTAACAGTGAAAAAGTTGCTTCATTGGCATATGCACGAATCCAGGGCAAAGCTGCGCTTGTGACTCATTTTCAGAATTCAAGCCTAATGAATGAGGACAAGCGTTGCCGGCCAATTCTCTTCCACTCAGAGGGCCAAGAAACTACTGACCAGGAAAATTACCTTTCCAGAAATTTGAACATATGTATCCGGCAGCCAGATGGCTCTTACTCAGGCGACTCATTGGACAGCCCAAAGGGGGATCTGGATGAGAAGCCAGAGAACAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0010564 GO:0010638 GO:0033043 GO:0040008 GO:0040020 GO:0045787 GO:0045836 GO:0045927 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051445 GO:0051446 GO:0051726 GO:0051783 GO:0051785 GO:0065007 GO:0090068 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

752

Amino Acids

82.28

Weight (kDa)

6.3

Isoelectric Point (pI)

54.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001229)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29400 AT1G29400 AT1G29400
fragaria_vesca	FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_3g06390 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250 FvH4_6g38250
malus_domestica	MD05G1291700.v1.1 MD09G1151600.v1.1 MD10G1267700.v1.1 MD17G1139300.v1.1
prunus_persica	Prupe.3G172900_v2.0.a1 Prupe.4G073800_v2.0.a1
pyrus_communis	pycom05g26820 pycom09g07120 pycom10g22380 pycom17g13240
rosa_chinensis	RchiOBHm_Chr2g0151511 RchiOBHm_Chr5g0012911
rosa_laevigata	RLG00000020556 RLG00000031968
rosa_multiflora	Rmu_sc0000940.1_g000021 Rmu_sc0016318.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063670 Rroxscaffold_2G00096390
rosa_rugosa	Rorug02G0426600 Rorug02G0426700 Rorug02G0426800 Rorug05G0005100 Rorug05G0005100 Rorug05G0005100
rosa_samantha	Rh2AG487500 Rh2BG499900 Rh2CG474000 Rh2DG511100 Rh5AG099400 Rh5BG096000 Rh5CG108300 Rh5DG094700
rosa_wichuraiana	Rw2G039960 Rw5G008680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1881
Acc65I	GGTACC	1 cut(s)	863
AccB1I	GGYRCC	1 cut(s)	863
AccB7I	CCANNNNNTGG	4 cut(s)	1366, 1385, 1457, 1601
AccBSI	CCGCTC	1 cut(s)	425
AciI	CCGC	3 cut(s)	423, 748, 1277
AclWI	GGATC	3 cut(s)	613, 1378, 2235
AcoI	YGGCCR	2 cut(s)	1262, 2096
AcsI	RAATTY	5 cut(s)	650, 1165, 1985, 2062, 2158
AcuI	CTGAAG	1 cut(s)	495
AfaI	GTAC	4 cut(s)	865, 1613, 1808, 1855
AgsI	TTSAA	7 cut(s)	137, 550, 800, 975, 1170, 2067, 2164
Alw21I	GWGCWC	3 cut(s)	255, 334, 763
Alw26I	GTCTC	3 cut(s)	457, 634, 1935
AlwI	GGATC	3 cut(s)	613, 1378, 2235
Ama87I	CYCGRG	1 cut(s)	922
AoxI	GGCC	3 cut(s)	1262, 2096, 2119
ApeKI	GCWGC	8 cut(s)	677, 686, 1088, 1643, 1822, 1829, 2039, 2179
ApoI	RAATTY	5 cut(s)	650, 1165, 1985, 2062, 2158
Asp718I	GGTACC	1 cut(s)	863
AspLEI	GCGC	4 cut(s)	874, 1015, 1093, 2044
AspS9I	GGNCC	6 cut(s)	1027, 1142, 1199, 1604, 1637, 2119
AsuC2I	CCSGG	3 cut(s)	623, 923, 924
AsuHPI	GGTGA	3 cut(s)	831, 1419, 1560
AvaI	CYCGRG	1 cut(s)	922
AvaII	GGWCC	5 cut(s)	1027, 1142, 1199, 1604, 1637
BaeI	ACNNNNGTAYC	2 cut(s)	2155, 2188
BalI	TGGCCA	1 cut(s)	1264
BanI	GGYRCC	1 cut(s)	863
BanII	GRGCYC	1 cut(s)	334
BbsI	GAAGAC	1 cut(s)	1532
Bbv12I	GWGCWC	3 cut(s)	255, 334, 763
BbvI	GCAGC	8 cut(s)	664, 698, 1100, 1655, 1809, 1816, 2026, 2191
BcgI	CGANNNNNNTGC	2 cut(s)	718, 752
BciVI	GTATCC	2 cut(s)	1759, 2183
BclI	TGATCA	1 cut(s)	1669
BcnI	CCSGG	3 cut(s)	623, 923, 924
BcoDI	GTCTC	3 cut(s)	457, 634, 1935
BfaI	CTAG	7 cut(s)	173, 276, 1248, 1296, 1397, 1572, 1770
BfmI	CTRYAG	1 cut(s)	678
BfuAI	ACCTGC	1 cut(s)	1881
BfuI	GTATCC	2 cut(s)	1759, 2183
BglI	GCCNNNNNGGC	1 cut(s)	1335
Bme18I	GGWCC	5 cut(s)	1027, 1142, 1199, 1604, 1637
BmeT110I	CYCGRG	1 cut(s)	922
BmgT120I	GGNCC	6 cut(s)	1027, 1142, 1199, 1604, 1637, 2119
BmiI	GGNNCC	2 cut(s)	865, 1144
BmsI	GCATC	6 cut(s)	277, 547, 569, 765, 1102, 1291
BpiI	GAAGAC	1 cut(s)	1532
BpmI	CTGGAG	2 cut(s)	98, 843
BpuEI	CTTGAG	2 cut(s)	481, 774
BpuMI	CCSGG	3 cut(s)	623, 923, 924
BsaAI	YACGTR	1 cut(s)	764
BsaBI	GATNNNNATC	1 cut(s)	51
BsaWI	WCCGGW	1 cut(s)	1382
BsaXI	ACNNNNNCTCC	4 cut(s)	242, 272, 838, 868
Bse118I	RCCGGY	3 cut(s)	1329, 1639, 2094
Bse1I	ACTGG	3 cut(s)	901, 1451, 1639
Bse3DI	GCAATG	2 cut(s)	441, 1906
Bse8I	GATNNNNATC	1 cut(s)	51
BseGI	GGATG	8 cut(s)	268, 414, 562, 1282, 1379, 1436, 1794, 2239
BseJI	GATNNNNATC	1 cut(s)	51
BseMI	GCAATG	2 cut(s)	441, 1906
BseMII	CTCAG	6 cut(s)	312, 952, 1217, 1360, 2127, 2211
BseNI	ACTGG	3 cut(s)	901, 1451, 1639
BseRI	GAGGAG	2 cut(s)	95, 846
BseXI	GCAGC	8 cut(s)	664, 698, 1100, 1655, 1809, 1816, 2026, 2191
BseYI	CCCAGC	4 cut(s)	245, 719, 743, 982
BshFI	GGCC	3 cut(s)	1264, 2098, 2121
BshNI	GGYRCC	1 cut(s)	863
BsiHKAI	GWGCWC	3 cut(s)	255, 334, 763
BsiHKCI	CYCGRG	1 cut(s)	922
BsiSI	CCGG	7 cut(s)	622, 923, 1330, 1383, 1640, 2095, 2176
BslFI	GGGAC	1 cut(s)	1128
BsmAI	GTCTC	3 cut(s)	457, 634, 1935
BsmBI	CGTCTC	1 cut(s)	457
BsmFI	GGGAC	1 cut(s)	1128
BsmI	GAATGC	1 cut(s)	1099
BsnI	GGCC	3 cut(s)	1264, 2098, 2121
BsoBI	CYCGRG	1 cut(s)	922
Bsp1286I	GDGCHC	3 cut(s)	255, 334, 763
Bsp143I	GATC	7 cut(s)	22, 52, 97, 618, 1370, 1669, 2227
BspACI	CCGC	3 cut(s)	423, 748, 1277
BspANI	GGCC	3 cut(s)	1264, 2098, 2121
BspCNI	CTCAG	6 cut(s)	313, 951, 1216, 1359, 2126, 2210
BspHI	TCATGA	1 cut(s)	1443
BspLI	GGNNCC	2 cut(s)	865, 1144
BspMAI	CTGCAG	1 cut(s)	682
BspMI	ACCTGC	1 cut(s)	1881
BspPI	GGATC	3 cut(s)	613, 1378, 2235
BspQI	GCTCTTC	1 cut(s)	225
BspT107I	GGYRCC	1 cut(s)	863
BsrBI	CCGCTC	1 cut(s)	425
BsrDI	GCAATG	2 cut(s)	441, 1906
BsrFI	RCCGGY	3 cut(s)	1329, 1639, 2094
BsrI	ACTGG	3 cut(s)	901, 1451, 1639
BssAI	RCCGGY	3 cut(s)	1329, 1639, 2094
BssMI	GATC	7 cut(s)	22, 52, 97, 618, 1370, 1669, 2227
BssT1I	CCWWGG	4 cut(s)	498, 529, 1030, 1615
Bst4CI	ACNGT	5 cut(s)	305, 1484, 1850, 1994, 2252
Bst6I	CTCTTC	3 cut(s)	84, 225, 2111
BstAPI	GCANNNNNTGC	1 cut(s)	440
BstBAI	YACGTR	1 cut(s)	764
BstC8I	GCNNGC	8 cut(s)	34, 376, 380, 427, 441, 1331, 1827, 2096
BstDEI	CTNAG	9 cut(s)	28, 56, 321, 938, 1005, 1203, 1346, 2113, 2197
BstDSI	CCRYGG	1 cut(s)	1849
BstF5I	GGATG	8 cut(s)	268, 414, 562, 1282, 1379, 1436, 1794, 2239
BstHHI	GCGC	4 cut(s)	874, 1015, 1093, 2044
BstKTI	GATC	7 cut(s)	25, 55, 100, 621, 1373, 1672, 2230
BstMAI	GTCTC	3 cut(s)	457, 634, 1935
BstMBI	GATC	7 cut(s)	22, 52, 97, 618, 1370, 1669, 2227
BstMWI	GCNNNNNNNGC	9 cut(s)	73, 431, 440, 683, 686, 695, 1335, 2012, 2095
BstNSI	RCATGY	2 cut(s)	166, 378
BstSFI	CTRYAG	1 cut(s)	678
BstV1I	GCAGC	8 cut(s)	664, 698, 1100, 1655, 1809, 1816, 2026, 2191
BstV2I	GAAGAC	1 cut(s)	1532
BstX2I	RGATCY	3 cut(s)	618, 1370, 2227
BstXI	CCANNNNNNTGG	3 cut(s)	867, 962, 1153
BstYI	RGATCY	3 cut(s)	618, 1370, 2227
BsuI	GTATCC	2 cut(s)	1759, 2183
BsuRI	GGCC	3 cut(s)	1264, 2098, 2121
BtgI	CCRYGG	1 cut(s)	1849
BtsCI	GGATG	8 cut(s)	268, 414, 562, 1282, 1379, 1436, 1794, 2239
BtsI	GCAGTG	2 cut(s)	369, 429
BtsIMutI	CAGTG	8 cut(s)	369, 429, 570, 1458, 1489, 1660, 1762, 1999
BveI	ACCTGC	1 cut(s)	1881
Cac8I	GCNNGC	8 cut(s)	34, 376, 380, 427, 441, 1331, 1827, 2096
CciI	TCATGA	1 cut(s)	1443
CfoI	GCGC	4 cut(s)	874, 1015, 1093, 2044
Cfr10I	RCCGGY	3 cut(s)	1329, 1639, 2094
Cfr13I	GGNCC	6 cut(s)	1027, 1142, 1199, 1604, 1637, 2119
Cfr9I	CCCGGG	1 cut(s)	922
Csp6I	GTAC	4 cut(s)	864, 1612, 1807, 1854
CviQI	GTAC	4 cut(s)	864, 1612, 1807, 1854
DdeI	CTNAG	9 cut(s)	28, 56, 321, 938, 1005, 1203, 1346, 2113, 2197
DpnI	GATC	7 cut(s)	24, 54, 99, 620, 1372, 1671, 2229
DpnII	GATC	7 cut(s)	22, 52, 97, 618, 1370, 1669, 2227
EaeI	YGGCCR	2 cut(s)	1262, 2096
Eam1104I	CTCTTC	3 cut(s)	84, 225, 2111
EarI	CTCTTC	3 cut(s)	84, 225, 2111
Ecl136II	GAGCTC	1 cut(s)	332
Eco130I	CCWWGG	4 cut(s)	498, 529, 1030, 1615
Eco24I	GRGCYC	1 cut(s)	334
Eco32I	GATATC	3 cut(s)	355, 402, 523
Eco47I	GGWCC	5 cut(s)	1027, 1142, 1199, 1604, 1637
Eco53kI	GAGCTC	1 cut(s)	332
Eco57I	CTGAAG	1 cut(s)	495
Eco88I	CYCGRG	1 cut(s)	922
EcoICRI	GAGCTC	1 cut(s)	332
EcoO109I	RGGNCCY	2 cut(s)	1142, 1199
EcoRI	GAATTC	1 cut(s)	2062
EcoRV	GATATC	3 cut(s)	355, 402, 523
EcoT14I	CCWWGG	4 cut(s)	498, 529, 1030, 1615
EcoT22I	ATGCAT	1 cut(s)	562
EcoT38I	GRGCYC	1 cut(s)	334
ErhI	CCWWGG	4 cut(s)	498, 529, 1030, 1615
Esp3I	CGTCTC	1 cut(s)	457
FalI	AAGNNNNNCTT	4 cut(s)	522, 554, 2028, 2060
FaqI	GGGAC	1 cut(s)	1128
FauI	CCCGC	1 cut(s)	1270
FauNDI	CATATG	2 cut(s)	2017, 2168
FbaI	TGATCA	1 cut(s)	1669
FokI	GGATG	8 cut(s)	255, 401, 569, 1269, 1366, 1423, 1781, 2246
FriOI	GRGCYC	1 cut(s)	334
FspBI	CTAG	7 cut(s)	173, 276, 1248, 1296, 1397, 1572, 1770
GlaI	GCGC	4 cut(s)	873, 1014, 1092, 2043
GsaI	CCCAGC	4 cut(s)	249, 723, 747, 986
GsuI	CTGGAG	2 cut(s)	98, 843
HaeIII	GGCC	3 cut(s)	1264, 2098, 2121
HapII	CCGG	7 cut(s)	622, 923, 1330, 1383, 1640, 2095, 2176
HhaI	GCGC	4 cut(s)	874, 1015, 1093, 2044
Hin6I	GCGC	4 cut(s)	872, 1013, 1091, 2042
HinP1I	GCGC	4 cut(s)	872, 1013, 1091, 2042
HinfI	GANTC	9 cut(s)	137, 317, 1424, 1447, 1696, 1705, 2025, 2050, 2204
HpaII	CCGG	7 cut(s)	622, 923, 1330, 1383, 1640, 2095, 2176
HphI	GGTGA	3 cut(s)	831, 1419, 1560
Hpy166II	GTNNAC	5 cut(s)	839, 1301, 1352, 1612, 1809
Hpy8I	GTNNAC	5 cut(s)	839, 1301, 1352, 1612, 1809
Hpy99I	CGWCG	1 cut(s)	314
HpyAV	CCTTC	6 cut(s)	519, 590, 1029, 1450, 1924, 1960
HpyCH4III	ACNGT	5 cut(s)	305, 1484, 1850, 1994, 2252
HpyCH4IV	ACGT	2 cut(s)	309, 763
HpyF10VI	GCNNNNNNNGC	9 cut(s)	73, 431, 440, 683, 686, 695, 1335, 2012, 2095
HpyF3I	CTNAG	9 cut(s)	28, 56, 321, 938, 1005, 1203, 1346, 2113, 2197
HpySE526I	ACGT	2 cut(s)	309, 763
HspAI	GCGC	4 cut(s)	872, 1013, 1091, 2042
KpnI	GGTACC	1 cut(s)	867
KroI	GCCGGC	2 cut(s)	1329, 2094
KroNI	GCCGGC	2 cut(s)	1331, 2096
Ksp22I	TGATCA	1 cut(s)	1669
Kzo9I	GATC	7 cut(s)	22, 52, 97, 618, 1370, 1669, 2227
LguI	GCTCTTC	1 cut(s)	225
LmnI	GCTCC	5 cut(s)	236, 250, 758, 1085, 1381
Lsp1109I	GCAGC	8 cut(s)	664, 698, 1100, 1655, 1809, 1816, 2026, 2191
LweI	GCATC	6 cut(s)	277, 547, 569, 765, 1102, 1291
MaeI	CTAG	7 cut(s)	173, 276, 1248, 1296, 1397, 1572, 1770
MaeII	ACGT	2 cut(s)	309, 763
MaeIII	GTNAC	7 cut(s)	305, 444, 710, 844, 1425, 1552, 2047
MalI	GATC	7 cut(s)	24, 54, 99, 620, 1372, 1671, 2229
MbiI	CCGCTC	1 cut(s)	425
MboI	GATC	7 cut(s)	22, 52, 97, 618, 1370, 1669, 2227
MboII	GAAGA	7 cut(s)	29, 101, 212, 1245, 1532, 1984, 2098
MfeI	CAATTG	1 cut(s)	1878
MflI	RGATCY	3 cut(s)	618, 1370, 2227
MhlI	GDGCHC	3 cut(s)	255, 334, 763
MlsI	TGGCCA	1 cut(s)	1264
MluNI	TGGCCA	1 cut(s)	1264
MlyI	GAGTC	4 cut(s)	311, 1433, 2044, 2198
MmeI	TCCRAC	2 cut(s)	214, 847
Mox20I	TGGCCA	1 cut(s)	1264
Mph1103I	ATGCAT	1 cut(s)	562
MroNI	GCCGGC	2 cut(s)	1329, 2094
MscI	TGGCCA	1 cut(s)	1264
MseI	TTAA	9 cut(s)	692, 701, 1127, 1472, 1781, 1887, 1964, 1989, 2254
MslI	CAYNNNNRTG	3 cut(s)	258, 434, 1922
Msp20I	TGGCCA	1 cut(s)	1264
MspA1I	CMGCKG	1 cut(s)	76
MspI	CCGG	7 cut(s)	622, 923, 1330, 1383, 1640, 2095, 2176
MunI	CAATTG	1 cut(s)	1878
Mva1269I	GAATGC	1 cut(s)	1099
MwoI	GCNNNNNNNGC	9 cut(s)	73, 431, 440, 683, 686, 695, 1335, 2012, 2095
NaeI	GCCGGC	2 cut(s)	1331, 2096
NciI	CCSGG	3 cut(s)	623, 923, 924
NdeI	CATATG	2 cut(s)	2017, 2168
NdeII	GATC	7 cut(s)	22, 52, 97, 618, 1370, 1669, 2227
NgoMIV	GCCGGC	2 cut(s)	1329, 2094
NlaIV	GGNNCC	2 cut(s)	865, 1144
NmuCI	GTSAC	4 cut(s)	710, 844, 1425, 2047
NsiI	ATGCAT	1 cut(s)	562
NspI	RCATGY	2 cut(s)	166, 378
PaeI	GCATGC	1 cut(s)	378
PagI	TCATGA	1 cut(s)	1443
PciSI	GCTCTTC	1 cut(s)	225
PctI	GAATGC	1 cut(s)	1099
PdiI	GCCGGC	2 cut(s)	1331, 2096
PfeI	GAWTC	5 cut(s)	137, 1447, 1696, 1705, 2025
PflMI	CCANNNNNTGG	4 cut(s)	1366, 1385, 1457, 1601
PfoI	TCCNGGA	2 cut(s)	621, 1543
PleI	GAGTC	4 cut(s)	311, 1432, 2044, 2198
PpsI	GAGTC	4 cut(s)	311, 1432, 2044, 2198
Ppu21I	YACGTR	1 cut(s)	764
PpuMI	RGGWCCY	2 cut(s)	1142, 1199
Psp124BI	GAGCTC	1 cut(s)	334
Psp5II	RGGWCCY	2 cut(s)	1142, 1199
PspFI	CCCAGC	4 cut(s)	245, 719, 743, 982
PspN4I	GGNNCC	2 cut(s)	865, 1144
PspPI	GGNCC	6 cut(s)	1027, 1142, 1199, 1604, 1637, 2119
PspPPI	RGGWCCY	2 cut(s)	1142, 1199
PstI	CTGCAG	1 cut(s)	682
PsuI	RGATCY	3 cut(s)	618, 1370, 2227
PvuII	CAGCTG	1 cut(s)	76
RsaI	GTAC	4 cut(s)	865, 1613, 1808, 1855
RsaNI	GTAC	4 cut(s)	864, 1612, 1807, 1854
RseI	CAYNNNNRTG	3 cut(s)	258, 434, 1922
SacI	GAGCTC	1 cut(s)	334
SapI	GCTCTTC	1 cut(s)	225
SaqAI	TTAA	9 cut(s)	692, 701, 1127, 1472, 1781, 1887, 1964, 1989, 2254
Sau3AI	GATC	7 cut(s)	22, 52, 97, 618, 1370, 1669, 2227
Sau96I	GGNCC	6 cut(s)	1027, 1142, 1199, 1604, 1637, 2119
SchI	GAGTC	4 cut(s)	311, 1433, 2044, 2198
SduI	GDGCHC	3 cut(s)	255, 334, 763
SfaNI	GCATC	6 cut(s)	277, 547, 569, 765, 1102, 1291
SfcI	CTRYAG	1 cut(s)	678
SinI	GGWCC	5 cut(s)	1027, 1142, 1199, 1604, 1637
SmaI	CCCGGG	1 cut(s)	924
SmiMI	CAYNNNNRTG	3 cut(s)	258, 434, 1922
SmlI	CTYRAG	2 cut(s)	460, 789
SmoI	CTYRAG	2 cut(s)	460, 789
SphI	GCATGC	1 cut(s)	378
SsiI	CCGC	3 cut(s)	423, 748, 1277
SspMI	CTAG	7 cut(s)	173, 276, 1248, 1296, 1397, 1572, 1770
SstI	GAGCTC	1 cut(s)	334
StyI	CCWWGG	4 cut(s)	498, 529, 1030, 1615
TaaI	ACNGT	5 cut(s)	305, 1484, 1850, 1994, 2252
TaiI	ACGT	2 cut(s)	312, 766
TaqI	TCGA	7 cut(s)	61, 312, 477, 583, 673, 738, 1322
TatI	WGTACW	1 cut(s)	1806
TauI	GCSGC	2 cut(s)	425, 750
TfiI	GAWTC	5 cut(s)	137, 1447, 1696, 1705, 2025
Tru1I	TTAA	9 cut(s)	692, 701, 1127, 1472, 1781, 1887, 1964, 1989, 2254
Tru9I	TTAA	9 cut(s)	692, 701, 1127, 1472, 1781, 1887, 1964, 1989, 2254
TscAI	CASTG	8 cut(s)	376, 436, 570, 1458, 1489, 1660, 1762, 1999
TseFI	GTSAC	4 cut(s)	710, 844, 1425, 2047
TseI	GCWGC	8 cut(s)	677, 686, 1088, 1643, 1822, 1829, 2039, 2179
Tsp45I	GTSAC	4 cut(s)	710, 844, 1425, 2047
TspGWI	ACGGA	1 cut(s)	481
TspMI	CCCGGG	1 cut(s)	922
TspRI	CASTG	8 cut(s)	376, 436, 570, 1458, 1489, 1660, 1762, 1999
Van91I	CCANNNNNTGG	4 cut(s)	1366, 1385, 1457, 1601
VpaK11BI	GGWCC	5 cut(s)	1027, 1142, 1199, 1604, 1637
XapI	RAATTY	5 cut(s)	650, 1165, 1985, 2062, 2158
XbaI	TCTAGA	2 cut(s)	275, 1396
XceI	RCATGY	2 cut(s)	166, 378
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1822
XmaI	CCCGGG	1 cut(s)	922
XspI	CTAG	7 cut(s)	173, 276, 1248, 1296, 1397, 1572, 1770
Zsp2I	ATGCAT	1 cut(s)	562

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.