Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0002563

Physical Location & Seq

Genomic Coordinates Forward (+)

22795782 .. 22800776

Gene Structure 4995 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG206200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGCATACCAATCACCCAAAGAAGGACCTGAAAGAGATGGAATTTTTCACCGAGTATGGGGATGCTAATAGATACAAGATTCTGGAAGTCATAGGGAAGGGAAGTTATGGGGTGGTTTGTGCGGCTATTGACACACATACTGGGGAGAAAGTTGCCATAAAGAAAATTCATGATATATTTGAGCACATCTCTGATGCTATTAGGATTTTGCGAGAAGTTAAGTTGCTTAGGCTTTTAAGACATCCTGATATTGTTGAAATTAAGCGCATCATGTTACCACCTTCAAAGAGGGAGTTCAAAGATATTTATGTTGTTTTTGAGCTGATGGAGTCAGACCTTCACCAAGTTATCAAGGCTAATGATGACTTGACCCGCGAACATCATCAGTTCTTTCTTTACCAGATGTTACGTGCATTGAAATATATGCATACAGCAAATGTGTATCATCGAGATCTTAAGCCAAAAAACATATTGGCCAATGCAAATTGCAAGCTTAAAGTTTGTGATTTTGGACTAGCAAGAGTTGCCTTTAATGATACCCCAACTACAATATTTTGGACAGATTATGTTGCTACACGATGGTACAGAGCTCCGGAACTATGTGGATCATTCTTTTCCAAGTATACACCGGCCATTGATATATGGAGTATTGGCTGCATATTTGCAGAGGTTTTGACAGGGAAGCCATTGTTTCCCGGTAAAAGTGTTGTTCATCAATTAGATTTGATTACCGACCTCCTTGGAACGCCTACACTAGAGACCATCTCTGGAGTTCGAAATGAGAAGGCAAGGAAATACTTGACAGAGATGCGGAAAAAGCATCCTGTGTCATTTACACAAAAATTTCCCAAGGCAGATCCTTTAGCACTCCGCCTATTGCAAAGGCTACTGGCCTTTGACCCAAAGGATCGACCGACTGCAGAGGAGGCATTGGCGGATCCGTACTTCAAGGGTCTGGCCAGAGTCGAGAGAGAGCTTTCTTGTCAGCCTATTTCAAAGCTGGAATTTGAATTTGAAAGGCGAAGAGTGATTAAGGAGGACATTAGGGAACTAATTTACCGGGAAATACTCGAATACCATCCACAACTTCTTAAGGATTACATGAACGGAACTGAAGGCACAAGCTTTTTGTATCCAAGTGCTATAGGTCAATTCAGAAAGCAGTTTGCTTATCTCGAGGAACATGGTGGTAAAAGTGGACCGGTCATTCCTCCAGAGAGGAAGCATGTCTCCCTTCCACGATCTACTGTTCACTCAAGTACGATACCCCCTATTGCACAACCAAATTTGCTCTCGTATGAGAACCGGCAGACAGAAGAGGCTTCTAACTGTCTTAAAGTAACAGACACCATTAATGGGAATCCATCAAAGGCCTCACGTCCTCCACCAAGGGTGCCAACAGCAAAACCTGGACGAGTTGTCGGACCGGTTCTTCCACATGAGAATGGCAGAAATGCTAAGGAAACCCACGATCCAAGGACGTTCTACAGAAACGCAGTTCTTCCTCAGCAGTCTATCTCTCCACACTGCTTCTTCAGAACTCATACTGCCGGTCAAGAAAAGTCCCTGTTGGAGATGAAGAGGGACGCAGCACATGCTAAACTGCAACCCCATCTTGAACAACGTAACTTGGTGTCAAAACCTATTCCGGGCATGGTCATCGATGTCAACACCAACCCATACCACCCGCCATCCACCAAGGTAGATCAACTAAATGCAATAGATACGAAGCTGCTGCATGCGCAGTCACAGTTTGGTCCTGTTGGTGCCGCAGCTGTAGCTGTAGCTGCTCACAGGAACACAGGAGCTGTTCACTATGGATTGTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

609

Amino Acids

69.3

Weight (kDa)

9.24

Isoelectric Point (pI)

32.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	25 - 316	8.5e-64	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	26 - 255	9.6e-31	Protein tyrosine and serine/threonine kinase
Kdo	PF06293	56 - 170	2e-06	Lipopolysaccharide kinase (Kdo/WaaP) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002563)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53510 AT3G14720 AT3G14720 AT3G14720
fragaria_vesca	FvH4_3g17440 FvH4_3g17440 FvH4_3g17440 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240 FvH4_6g38240
malus_domestica	MD03G1251600.v1.1 MD09G1151800.v1.1 MD11G1272700.v1.1 MD17G1139400.v1.1
prunus_persica	Prupe.3G172800_v2.0.a1 Prupe.3G172800_v2.0.a1 Prupe.4G154700_v2.0.a1
pyrus_communis	pycom03g19900
rosa_chinensis	RchiOBHm_Chr2g0151501 RchiOBHm_Chr5g0028971
rosa_laevigata	RLG00000020555 RLG00000033132
rosa_multiflora	Rmu_sc0000940.1_g000020 Rmu_sc0010209.1_g000001
rosa_roxburghii	Rroxscaffold_1G00050920 Rroxscaffold_2G00096400
rosa_rugosa	Rorug02G0426600 Rorug05G0112100
rosa_samantha	Rh2AG487400 Rh2BG499800 Rh2CG473800 Rh2DG511000 Rh5AG204100 Rh5BG202400 Rh5CG223200 Rh5DG206200
rosa_wichuraiana	Rw2G039950 Rw5G018500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1743
AccB1I	GGYRCC	2 cut(s)	1393, 1766
AccI	GTMKAC	1 cut(s)	623
AccII	CGCG	1 cut(s)	375
AccIII	TCCGGA	1 cut(s)	592
AciI	CCGC	7 cut(s)	122, 373, 811, 871, 935, 1688, 1770
AclWI	GGATC	6 cut(s)	613, 851, 915, 932, 945, 1466
AcoI	YGGCCR	3 cut(s)	474, 630, 957
AcsI	RAATTY	6 cut(s)	41, 165, 842, 1004, 1010, 1285
AcuI	CTGAAG	2 cut(s)	1134, 1519
AfaI	GTAC	3 cut(s)	584, 944, 1261
AfiI	CCNNNNNNNGG	4 cut(s)	22, 57, 1356, 1649
AflII	CTTAAG	2 cut(s)	455, 1091
AgeI	ACCGGT	2 cut(s)	1201, 1426
AgsI	TTSAA	9 cut(s)	257, 285, 298, 418, 949, 996, 1010, 1016, 1619
AhdI	GACNNNNNGTC	1 cut(s)	1418
AjiI	CACGTC	1 cut(s)	1379
AjnI	CCWGG	1 cut(s)	1408
Alw21I	GWGCWC	2 cut(s)	186, 592
Alw26I	GTCTC	2 cut(s)	752, 1234
AlwI	GGATC	6 cut(s)	613, 851, 915, 932, 945, 1466
AlwNI	CAGNNNCTG	1 cut(s)	1808
Ama87I	CYCGRG	1 cut(s)	1175
Aor13HI	TCCGGA	1 cut(s)	592
AoxI	GGCC	5 cut(s)	474, 630, 891, 957, 1371
ApeKI	GCWGC	6 cut(s)	654, 1589, 1732, 1735, 1772, 1787
ApoI	RAATTY	6 cut(s)	41, 165, 842, 1004, 1010, 1285
AseI	ATTAAT	1 cut(s)	1353
AsiGI	ACCGGT	2 cut(s)	1201, 1426
AspLEI	GCGC	2 cut(s)	267, 1744
AspS9I	GGNCC	4 cut(s)	25, 1199, 1424, 1757
AsuC2I	CCSGG	3 cut(s)	696, 1061, 1650
AsuHPI	GGTGA	3 cut(s)	5, 40, 332
AsuII	TTCGAA	1 cut(s)	775
AvaI	CYCGRG	1 cut(s)	1175
AvaII	GGWCC	4 cut(s)	25, 1199, 1424, 1757
BalI	TGGCCA	2 cut(s)	476, 959
BamHI	GGATCC	1 cut(s)	937
BanI	GGYRCC	2 cut(s)	1393, 1766
BanII	GRGCYC	1 cut(s)	592
Bbv12I	GWGCWC	2 cut(s)	186, 592
BbvCI	CCTCAGC	1 cut(s)	1506
BbvI	GCAGC	6 cut(s)	641, 1601, 1719, 1722, 1774, 1784
BccI	CCATC	8 cut(s)	31, 319, 573, 770, 1086, 1372, 1620, 1699
BcgI	CGANNNNNNTGC	4 cut(s)	1642, 1676, 1717, 1751
BciT130I	CCWGG	1 cut(s)	1410
BciVI	GTATCC	1 cut(s)	1143
BcnI	CCSGG	3 cut(s)	696, 1061, 1650
BcoDI	GTCTC	2 cut(s)	752, 1234
BfaI	CTAG	2 cut(s)	515, 755
BfmI	CTRYAG	5 cut(s)	918, 1143, 1486, 1776, 1782
BfrI	CTTAAG	2 cut(s)	455, 1091
BfuI	GTATCC	1 cut(s)	1143
BglII	AGATCT	1 cut(s)	451
BisI	GCNGC	8 cut(s)	123, 655, 1590, 1733, 1736, 1770, 1773, 1788
BlsI	GCNGC	8 cut(s)	124, 656, 1591, 1734, 1737, 1771, 1774, 1789
Bme1390I	CCNGG	4 cut(s)	696, 1061, 1410, 1650
Bme18I	GGWCC	4 cut(s)	25, 1199, 1424, 1757
BmeRI	GACNNNNNGTC	1 cut(s)	1418
BmeT110I	CYCGRG	1 cut(s)	1175
BmgBI	CACGTC	1 cut(s)	1379
BmgT120I	GGNCC	4 cut(s)	25, 1199, 1424, 1757
BmiI	GGNNCC	3 cut(s)	939, 1395, 1768
BmrFI	CCNGG	4 cut(s)	696, 1061, 1410, 1650
BmrI	ACTGGG	1 cut(s)	150
BmsI	GCATC	5 cut(s)	52, 184, 276, 798, 829
BmuI	ACTGGG	1 cut(s)	150
BplI	GAGNNNNNCTC	4 cut(s)	173, 205, 749, 781
BpmI	CTGGAG	2 cut(s)	789, 1197
Bpu10I	CCTNAGC	3 cut(s)	227, 1458, 1506
Bpu14I	TTCGAA	1 cut(s)	775
BpuEI	CTTGAG	1 cut(s)	1240
BpuMI	CCSGG	3 cut(s)	696, 1061, 1650
Bsa29I	ATCGAT	1 cut(s)	1662
BsaAI	YACGTR	1 cut(s)	410
BsaI	GGTCTC	1 cut(s)	752
BsaJI	CCNNGG	5 cut(s)	739, 849, 1388, 1475, 1698
BsaWI	WCCGGW	3 cut(s)	592, 1201, 1426
Bsc4I	CCNNNNNNNGG	4 cut(s)	22, 57, 1356, 1649
Bse118I	RCCGGY	5 cut(s)	628, 1201, 1305, 1426, 1550
Bse1I	ACTGG	2 cut(s)	145, 894
BseAI	TCCGGA	1 cut(s)	592
BseBI	CCWGG	1 cut(s)	1410
BseCI	ATCGAT	1 cut(s)	1662
BseDI	CCNNGG	5 cut(s)	739, 849, 1388, 1475, 1698
BseGI	GGATG	5 cut(s)	67, 241, 820, 1078, 1691
BseLI	CCNNNNNNNGG	4 cut(s)	22, 57, 1356, 1649
BseMII	CTCAG	1 cut(s)	1520
BseNI	ACTGG	2 cut(s)	145, 894
BseRI	GAGGAG	1 cut(s)	938
BseXI	GCAGC	6 cut(s)	641, 1601, 1719, 1722, 1774, 1784
Bsh1236I	CGCG	1 cut(s)	375
Bsh1285I	CGRYCG	1 cut(s)	914
BshFI	GGCC	5 cut(s)	476, 632, 893, 959, 1373
BshNI	GGYRCC	2 cut(s)	1393, 1766
BshTI	ACCGGT	2 cut(s)	1201, 1426
BshVI	ATCGAT	1 cut(s)	1662
BsiEI	CGRYCG	1 cut(s)	914
BsiHKAI	GWGCWC	2 cut(s)	186, 592
BsiHKCI	CYCGRG	1 cut(s)	1175
BsiSI	CCGG	9 cut(s)	593, 629, 696, 1060, 1202, 1306, 1427, 1551, 1649
BslFI	GGGAC	2 cut(s)	1549, 1598
BslI	CCNNNNNNNGG	4 cut(s)	22, 57, 1356, 1649
BsmAI	GTCTC	2 cut(s)	752, 1234
BsmFI	GGGAC	2 cut(s)	1549, 1598
BsnI	GGCC	5 cut(s)	476, 632, 893, 959, 1373
Bso31I	GGTCTC	1 cut(s)	752
BsoBI	CYCGRG	1 cut(s)	1175
Bsp119I	TTCGAA	1 cut(s)	775
Bsp1286I	GDGCHC	2 cut(s)	186, 592
Bsp13I	TCCGGA	1 cut(s)	592
Bsp143I	GATC	8 cut(s)	451, 605, 856, 907, 937, 1241, 1471, 1705
BspACI	CCGC	7 cut(s)	122, 373, 811, 871, 935, 1688, 1770
BspANI	GGCC	5 cut(s)	476, 632, 893, 959, 1373
BspCNI	CTCAG	1 cut(s)	1519
BspDI	ATCGAT	1 cut(s)	1662
BspEI	TCCGGA	1 cut(s)	592
BspFNI	CGCG	1 cut(s)	375
BspHI	TCATGA	1 cut(s)	169
BspLI	GGNNCC	3 cut(s)	939, 1395, 1768
BspMAI	CTGCAG	1 cut(s)	922
BspPI	GGATC	6 cut(s)	613, 851, 915, 932, 945, 1466
BspT104I	TTCGAA	1 cut(s)	775
BspT107I	GGYRCC	2 cut(s)	1393, 1766
BspTI	CTTAAG	2 cut(s)	455, 1091
BspTNI	GGTCTC	1 cut(s)	752
BsrFI	RCCGGY	5 cut(s)	628, 1201, 1305, 1426, 1550
BsrI	ACTGG	2 cut(s)	145, 894
BssAI	RCCGGY	5 cut(s)	628, 1201, 1305, 1426, 1550
BssECI	CCNNGG	5 cut(s)	739, 849, 1388, 1475, 1698
BssMI	GATC	8 cut(s)	451, 605, 856, 907, 937, 1241, 1471, 1705
BssNAI	GTATAC	1 cut(s)	624
BssT1I	CCWWGG	5 cut(s)	739, 849, 1388, 1475, 1698
Bst1107I	GTATAC	1 cut(s)	624
Bst2UI	CCWGG	1 cut(s)	1410
Bst4CI	ACNGT	3 cut(s)	1249, 1331, 1752
Bst6I	CTCTTC	3 cut(s)	1018, 1311, 1574
BstAFI	CTTAAG	2 cut(s)	455, 1091
BstAPI	GCANNNNNTGC	2 cut(s)	524, 1595
BstBAI	YACGTR	1 cut(s)	410
BstBI	TTCGAA	1 cut(s)	775
BstC8I	GCNNGC	2 cut(s)	491, 1740
BstDEI	CTNAG	4 cut(s)	227, 1458, 1506, 1827
BstF5I	GGATG	5 cut(s)	67, 241, 820, 1078, 1691
BstFNI	CGCG	1 cut(s)	375
BstHHI	GCGC	2 cut(s)	267, 1744
BstKTI	GATC	8 cut(s)	454, 608, 859, 910, 940, 1244, 1474, 1708
BstMAI	GTCTC	2 cut(s)	752, 1234
BstMBI	GATC	8 cut(s)	451, 605, 856, 907, 937, 1241, 1471, 1705
BstMCI	CGRYCG	1 cut(s)	914
BstMWI	GCNNNNNNNGC	7 cut(s)	524, 817, 926, 1595, 1741, 1778, 1787
BstNI	CCWGG	1 cut(s)	1410
BstNSI	RCATGY	3 cut(s)	1229, 1598, 1742
BstSCI	CCNGG	4 cut(s)	694, 1059, 1408, 1648
BstSFI	CTRYAG	5 cut(s)	918, 1143, 1486, 1776, 1782
BstUI	CGCG	1 cut(s)	375
BstV1I	GCAGC	6 cut(s)	641, 1601, 1719, 1722, 1774, 1784
BstX2I	RGATCY	3 cut(s)	451, 856, 937
BstYI	RGATCY	3 cut(s)	451, 856, 937
BstZ17I	GTATAC	1 cut(s)	624
Bsu15I	ATCGAT	1 cut(s)	1662
BsuI	GTATCC	1 cut(s)	1143
BsuRI	GGCC	5 cut(s)	476, 632, 893, 959, 1373
BsuTUI	ATCGAT	1 cut(s)	1662
BtrI	CACGTC	1 cut(s)	1379
BtsCI	GGATG	5 cut(s)	67, 241, 820, 1078, 1691
BtsI	GCAGTG	1 cut(s)	1525
BtsIMutI	CAGTG	1 cut(s)	1525
Cac8I	GCNNGC	2 cut(s)	491, 1740
CaiI	CAGNNNCTG	1 cut(s)	1808
CciI	TCATGA	1 cut(s)	169
CfoI	GCGC	2 cut(s)	267, 1744
Cfr10I	RCCGGY	5 cut(s)	628, 1201, 1305, 1426, 1550
Cfr13I	GGNCC	4 cut(s)	25, 1199, 1424, 1757
ClaI	ATCGAT	1 cut(s)	1662
CpoI	CGGWCCG	1 cut(s)	1424
CseI	GACGC	1 cut(s)	1595
Csp6I	GTAC	3 cut(s)	583, 943, 1260
CspAI	ACCGGT	2 cut(s)	1201, 1426
CspI	CGGWCCG	1 cut(s)	1424
CviAII	CATG	9 cut(s)	170, 271, 1102, 1184, 1226, 1439, 1595, 1654, 1739
CviQI	GTAC	3 cut(s)	583, 943, 1260
DdeI	CTNAG	4 cut(s)	227, 1458, 1506, 1827
DpnI	GATC	8 cut(s)	453, 607, 858, 909, 939, 1243, 1473, 1707
DpnII	GATC	8 cut(s)	451, 605, 856, 907, 937, 1241, 1471, 1705
DriI	GACNNNNNGTC	1 cut(s)	1418
EaeI	YGGCCR	3 cut(s)	474, 630, 957
Eam1104I	CTCTTC	3 cut(s)	1018, 1311, 1574
Eam1105I	GACNNNNNGTC	1 cut(s)	1418
EarI	CTCTTC	3 cut(s)	1018, 1311, 1574
EciI	GGCGGA	2 cut(s)	860, 950
Ecl136II	GAGCTC	1 cut(s)	590
Eco130I	CCWWGG	5 cut(s)	739, 849, 1388, 1475, 1698
Eco147I	AGGCCT	1 cut(s)	1373
Eco24I	GRGCYC	1 cut(s)	592
Eco31I	GGTCTC	1 cut(s)	752
Eco47I	GGWCC	4 cut(s)	25, 1199, 1424, 1757
Eco53kI	GAGCTC	1 cut(s)	590
Eco57I	CTGAAG	2 cut(s)	1134, 1519
Eco88I	CYCGRG	1 cut(s)	1175
EcoICRI	GAGCTC	1 cut(s)	590
EcoO109I	RGGNCCY	1 cut(s)	25
EcoRII	CCWGG	1 cut(s)	1408
EcoT14I	CCWWGG	5 cut(s)	739, 849, 1388, 1475, 1698
EcoT22I	ATGCAT	2 cut(s)	6, 429
EcoT38I	GRGCYC	1 cut(s)	592
ErhI	CCWWGG	5 cut(s)	739, 849, 1388, 1475, 1698
FaeI	CATG	9 cut(s)	173, 274, 1105, 1187, 1229, 1442, 1598, 1657, 1742
FaqI	GGGAC	2 cut(s)	1549, 1598
FatI	CATG	9 cut(s)	169, 270, 1101, 1183, 1225, 1438, 1594, 1653, 1738
FauI	CCCGC	2 cut(s)	380, 1695
FblI	GTMKAC	1 cut(s)	623
Fnu4HI	GCNGC	8 cut(s)	123, 655, 1590, 1733, 1736, 1770, 1773, 1788
FokI	GGATG	5 cut(s)	74, 228, 807, 1065, 1678
FriOI	GRGCYC	1 cut(s)	592
Fsp4HI	GCNGC	8 cut(s)	123, 655, 1590, 1733, 1736, 1770, 1773, 1788
FspBI	CTAG	2 cut(s)	515, 755
FspI	TGCGCA	1 cut(s)	1743
GlaI	GCGC	2 cut(s)	266, 1743
GluI	GCNGC	8 cut(s)	123, 655, 1590, 1733, 1736, 1770, 1773, 1788
GsuI	CTGGAG	2 cut(s)	789, 1197
HaeIII	GGCC	5 cut(s)	476, 632, 893, 959, 1373
HapII	CCGG	9 cut(s)	593, 629, 696, 1060, 1202, 1306, 1427, 1551, 1649
HgaI	GACGC	1 cut(s)	1595
HhaI	GCGC	2 cut(s)	267, 1744
Hin1II	CATG	9 cut(s)	173, 274, 1105, 1187, 1229, 1442, 1598, 1657, 1742
Hin6I	GCGC	2 cut(s)	265, 1742
HinP1I	GCGC	2 cut(s)	265, 1742
HincII	GTYRAC	1 cut(s)	1669
HindII	GTYRAC	1 cut(s)	1669
HindIII	AAGCTT	2 cut(s)	491, 1123
HinfI	GANTC	4 cut(s)	79, 329, 963, 1360
HpaII	CCGG	9 cut(s)	593, 629, 696, 1060, 1202, 1306, 1427, 1551, 1649
HphI	GGTGA	3 cut(s)	5, 40, 332
Hpy166II	GTNNAC	5 cut(s)	624, 1199, 1252, 1669, 1813
Hpy188I	TCNGA	5 cut(s)	193, 334, 1157, 1424, 1538
Hpy8I	GTNNAC	5 cut(s)	624, 1199, 1252, 1669, 1813
HpyAV	CCTTC	7 cut(s)	16, 91, 291, 347, 778, 1109, 1244
HpyCH4III	ACNGT	3 cut(s)	1249, 1331, 1752
HpyCH4IV	ACGT	4 cut(s)	409, 1378, 1481, 1624
HpyF10VI	GCNNNNNNNGC	7 cut(s)	524, 817, 926, 1595, 1741, 1778, 1787
HpyF3I	CTNAG	4 cut(s)	227, 1458, 1506, 1827
HpySE526I	ACGT	4 cut(s)	409, 1378, 1481, 1624
Hsp92II	CATG	9 cut(s)	173, 274, 1105, 1187, 1229, 1442, 1598, 1657, 1742
HspAI	GCGC	2 cut(s)	265, 1742
Kpn2I	TCCGGA	1 cut(s)	592
Kzo9I	GATC	8 cut(s)	451, 605, 856, 907, 937, 1241, 1471, 1705
LmnI	GCTCC	2 cut(s)	595, 1805
Lsp1109I	GCAGC	6 cut(s)	641, 1601, 1719, 1722, 1774, 1784
LweI	GCATC	5 cut(s)	52, 184, 276, 798, 829
MaeI	CTAG	2 cut(s)	515, 755
MaeII	ACGT	4 cut(s)	409, 1378, 1481, 1624
MaeIII	GTNAC	5 cut(s)	273, 405, 1339, 1625, 1746
MalI	GATC	8 cut(s)	453, 607, 858, 909, 939, 1243, 1473, 1707
MboI	GATC	8 cut(s)	451, 605, 856, 907, 937, 1241, 1471, 1705
MboII	GAAGA	6 cut(s)	1035, 1328, 1424, 1493, 1525, 1591
MflI	RGATCY	3 cut(s)	451, 856, 937
MhlI	GDGCHC	2 cut(s)	186, 592
MlsI	TGGCCA	2 cut(s)	476, 959
MluNI	TGGCCA	2 cut(s)	476, 959
MlyI	GAGTC	2 cut(s)	338, 972
MmeI	TCCRAC	2 cut(s)	1402, 1551
Mox20I	TGGCCA	2 cut(s)	476, 959
Mph1103I	ATGCAT	2 cut(s)	6, 429
MroI	TCCGGA	1 cut(s)	592
MscI	TGGCCA	2 cut(s)	476, 959
MslI	CAYNNNNRTG	1 cut(s)	1443
Msp20I	TGGCCA	2 cut(s)	476, 959
MspA1I	CMGCKG	1 cut(s)	1775
MspCI	CTTAAG	2 cut(s)	455, 1091
MspI	CCGG	9 cut(s)	593, 629, 696, 1060, 1202, 1306, 1427, 1551, 1649
MspR9I	CCNGG	4 cut(s)	696, 1061, 1410, 1650
MvaI	CCWGG	1 cut(s)	1410
MvnI	CGCG	1 cut(s)	375
MwoI	GCNNNNNNNGC	7 cut(s)	524, 817, 926, 1595, 1741, 1778, 1787
NciI	CCSGG	3 cut(s)	696, 1061, 1650
NdeII	GATC	8 cut(s)	451, 605, 856, 907, 937, 1241, 1471, 1705
NlaIII	CATG	9 cut(s)	173, 274, 1105, 1187, 1229, 1442, 1598, 1657, 1742
NlaIV	GGNNCC	3 cut(s)	939, 1395, 1768
NmuCI	GTSAC	1 cut(s)	1746
NsbI	TGCGCA	1 cut(s)	1743
NsiI	ATGCAT	2 cut(s)	6, 429
NspI	RCATGY	3 cut(s)	1229, 1598, 1742
NspV	TTCGAA	1 cut(s)	775
PaeI	GCATGC	1 cut(s)	1742
PaeR7I	CTCGAG	1 cut(s)	1175
PagI	TCATGA	1 cut(s)	169
PceI	AGGCCT	1 cut(s)	1373
PfeI	GAWTC	2 cut(s)	79, 1360
PinAI	ACCGGT	2 cut(s)	1201, 1426
PkrI	GCNGC	8 cut(s)	124, 656, 1591, 1734, 1737, 1771, 1774, 1789
PleI	GAGTC	2 cut(s)	337, 971
PpsI	GAGTC	2 cut(s)	337, 971
Ppu21I	YACGTR	1 cut(s)	410
PpuMI	RGGWCCY	1 cut(s)	25
PshBI	ATTAAT	1 cut(s)	1353
Psp124BI	GAGCTC	1 cut(s)	592
Psp5II	RGGWCCY	1 cut(s)	25
Psp6I	CCWGG	1 cut(s)	1408
PspGI	CCWGG	1 cut(s)	1408
PspN4I	GGNNCC	3 cut(s)	939, 1395, 1768
PspPI	GGNCC	4 cut(s)	25, 1199, 1424, 1757
PspPPI	RGGWCCY	1 cut(s)	25
PstI	CTGCAG	1 cut(s)	922
PstNI	CAGNNNCTG	1 cut(s)	1808
PsuI	RGATCY	3 cut(s)	451, 856, 937
PvuII	CAGCTG	1 cut(s)	1775
RsaI	GTAC	3 cut(s)	584, 944, 1261
RsaNI	GTAC	3 cut(s)	583, 943, 1260
RseI	CAYNNNNRTG	1 cut(s)	1443
Rsr2I	CGGWCCG	1 cut(s)	1424
RsrII	CGGWCCG	1 cut(s)	1424
SacI	GAGCTC	1 cut(s)	592
SatI	GCNGC	8 cut(s)	123, 655, 1590, 1733, 1736, 1770, 1773, 1788
Sau3AI	GATC	8 cut(s)	451, 605, 856, 907, 937, 1241, 1471, 1705
Sau96I	GGNCC	4 cut(s)	25, 1199, 1424, 1757
SchI	GAGTC	2 cut(s)	338, 972
ScrFI	CCNGG	4 cut(s)	696, 1061, 1410, 1650
SduI	GDGCHC	2 cut(s)	186, 592
SfaNI	GCATC	5 cut(s)	52, 184, 276, 798, 829
SfcI	CTRYAG	5 cut(s)	918, 1143, 1486, 1776, 1782
Sfr274I	CTCGAG	1 cut(s)	1175
SfuI	TTCGAA	1 cut(s)	775
SinI	GGWCC	4 cut(s)	25, 1199, 1424, 1757
SlaI	CTCGAG	1 cut(s)	1175
SmiMI	CAYNNNNRTG	1 cut(s)	1443
SmlI	CTYRAG	4 cut(s)	455, 1091, 1175, 1255
SmoI	CTYRAG	4 cut(s)	455, 1091, 1175, 1255
SphI	GCATGC	1 cut(s)	1742
SseBI	AGGCCT	1 cut(s)	1373
SsiI	CCGC	7 cut(s)	122, 373, 811, 871, 935, 1688, 1770
SspI	AATATT	1 cut(s)	552
SspMI	CTAG	2 cut(s)	515, 755
SstI	GAGCTC	1 cut(s)	592
StuI	AGGCCT	1 cut(s)	1373
StyD4I	CCNGG	4 cut(s)	694, 1059, 1408, 1648
StyI	CCWWGG	5 cut(s)	739, 849, 1388, 1475, 1698
TaaI	ACNGT	3 cut(s)	1249, 1331, 1752
TaiI	ACGT	4 cut(s)	412, 1381, 1484, 1627
TaqI	TCGA	7 cut(s)	448, 775, 910, 966, 1071, 1176, 1662
TaqII	GACCGA	1 cut(s)	928
TauI	GCSGC	2 cut(s)	125, 1772
TfiI	GAWTC	2 cut(s)	79, 1360
TscAI	CASTG	1 cut(s)	1532
TseFI	GTSAC	1 cut(s)	1746
TseI	GCWGC	6 cut(s)	654, 1589, 1732, 1735, 1772, 1787
Tsp45I	GTSAC	1 cut(s)	1746
TspDTI	ATGAA	4 cut(s)	158, 701, 1118, 1592
TspGWI	ACGGA	2 cut(s)	930, 1122
TspRI	CASTG	1 cut(s)	1532
Vha464I	CTTAAG	2 cut(s)	455, 1091
VpaK11BI	GGWCC	4 cut(s)	25, 1199, 1424, 1757
VspI	ATTAAT	1 cut(s)	1353
XapI	RAATTY	6 cut(s)	41, 165, 842, 1004, 1010, 1285
XceI	RCATGY	3 cut(s)	1229, 1598, 1742
XhoI	CTCGAG	1 cut(s)	1175
XmiI	GTMKAC	1 cut(s)	623
XspI	CTAG	2 cut(s)	515, 755
Zsp2I	ATGCAT	2 cut(s)	6, 429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.