CPL (NUC119) domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16810 |
| fragaria_vesca | FvH4_4g18900 FvH4_4g18900 |
| malus_domestica | MD13G1162200.v1.1 MD16G1162000.v1.1 |
| prunus_persica | Prupe.1G129500_v2.0.a1 |
| pyrus_communis | pycom13g13840 pycom16g13730 pycom16g13740 |
| rosa_chinensis | RchiOBHm_Chr4g0423801 |
| rosa_laevigata | RLG00000007532 |
| rosa_multiflora | Rmu_co8056970.1_g000001 Rmu_sc0003369.1_g000020 |
| rosa_roxburghii | Rroxscaffold_5G00365910 |
| rosa_rugosa | Rorug04G0190800 |
| rosa_samantha | Rh4AG250200 Rh4BG255400 Rh4CG064700 Rh4CG263400 Rh4DG249700 |
| rosa_wichuraiana | Rw4G021420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 146 |
| Acc36I | ACCTGC | 1 cut(s) | 146 |
| AccBSI | CCGCTC | 1 cut(s) | 1247 |
| AccI | GTMKAC | 1 cut(s) | 831 |
| AccII | CGCG | 1 cut(s) | 1739 |
| AciI | CCGC | 2 cut(s) | 1187, 1245 |
| AclWI | GGATC | 3 cut(s) | 327, 619, 1164 |
| AcoI | YGGCCR | 1 cut(s) | 1242 |
| AcsI | RAATTY | 5 cut(s) | 65, 134, 1210, 1505, 1520 |
| AcuI | CTGAAG | 7 cut(s) | 360, 392, 680, 890, 1851, 1853, 1916 |
| AcyI | GRCGYC | 1 cut(s) | 298 |
| AfaI | GTAC | 5 cut(s) | 175, 204, 405, 1610, 1891 |
| AfeI | AGCGCT | 1 cut(s) | 994 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 137, 573, 1710 |
| AflIII | ACRYGT | 3 cut(s) | 121, 388, 580 |
| AgsI | TTSAA | 6 cut(s) | 706, 863, 1092, 1723, 1803, 1841 |
| AjnI | CCWGG | 2 cut(s) | 1677, 1729 |
| Alw26I | GTCTC | 6 cut(s) | 289, 388, 1177, 1286, 1334, 1820 |
| AlwI | GGATC | 3 cut(s) | 327, 619, 1164 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 550, 913, 1201, 1370 |
| Aor51HI | AGCGCT | 1 cut(s) | 994 |
| AoxI | GGCC | 4 cut(s) | 1143, 1242, 1459, 1758 |
| ApeKI | GCWGC | 7 cut(s) | 544, 547, 554, 650, 893, 1195, 1631 |
| ApoI | RAATTY | 5 cut(s) | 65, 134, 1210, 1505, 1520 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 86, 118 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1686, 1836 |
| AspLEI | GCGC | 2 cut(s) | 776, 995 |
| AspS9I | GGNCC | 1 cut(s) | 1701 |
| AsuHPI | GGTGA | 3 cut(s) | 170, 1346, 1891 |
| AvaII | GGWCC | 1 cut(s) | 1701 |
| AxyI | CCTNAGG | 1 cut(s) | 572 |
| BaeGI | GKGCMC | 1 cut(s) | 1789 |
| BauI | CACGAG | 2 cut(s) | 399, 1112 |
| BbsI | GAAGAC | 1 cut(s) | 1441 |
| BbvI | GCAGC | 7 cut(s) | 556, 559, 566, 662, 880, 1207, 1643 |
| BccI | CCATC | 9 cut(s) | 524, 645, 947, 1039, 1273, 1313, 1559, 1588, 1846 |
| BceAI | ACGGC | 1 cut(s) | 285 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 41, 75 |
| BciT130I | CCWGG | 2 cut(s) | 1679, 1731 |
| BclI | TGATCA | 2 cut(s) | 1054, 1381 |
| BcoDI | GTCTC | 6 cut(s) | 289, 388, 1177, 1286, 1334, 1820 |
| BfaI | CTAG | 3 cut(s) | 98, 228, 960 |
| BfmI | CTRYAG | 3 cut(s) | 153, 894, 1626 |
| BfoI | RGCGCY | 2 cut(s) | 777, 996 |
| BfuAI | ACCTGC | 1 cut(s) | 146 |
| BglII | AGATCT | 1 cut(s) | 1899 |
| BisI | GCNGC | 8 cut(s) | 545, 548, 555, 651, 894, 1196, 1245, 1632 |
| BlpI | GCTNAGC | 1 cut(s) | 753 |
| BlsI | GCNGC | 8 cut(s) | 546, 549, 556, 652, 895, 1197, 1246, 1633 |
| BmcAI | AGTACT | 1 cut(s) | 175 |
| Bme1390I | CCNGG | 2 cut(s) | 1679, 1731 |
| Bme18I | GGWCC | 1 cut(s) | 1701 |
| BmgT120I | GGNCC | 1 cut(s) | 1701 |
| BmiI | GGNNCC | 2 cut(s) | 369, 922 |
| BmrFI | CCNGG | 2 cut(s) | 1679, 1731 |
| BmsI | GCATC | 2 cut(s) | 545, 1213 |
| BpiI | GAAGAC | 1 cut(s) | 1441 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 232, 264, 1283, 1315 |
| BpmI | CTGGAG | 3 cut(s) | 126, 449, 1496 |
| Bpu10I | CCTNAGC | 2 cut(s) | 210, 996 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 753 |
| BpuEI | CTTGAG | 4 cut(s) | 281, 836, 1160, 1678 |
| Bsa29I | ATCGAT | 1 cut(s) | 322 |
| BsaHI | GRCGYC | 1 cut(s) | 298 |
| BsaI | GGTCTC | 1 cut(s) | 1177 |
| BsaJI | CCNNGG | 2 cut(s) | 1500, 1729 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 651, 681 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 137, 573, 1710 |
| Bse1I | ACTGG | 1 cut(s) | 1513 |
| Bse21I | CCTNAGG | 1 cut(s) | 572 |
| Bse3DI | GCAATG | 3 cut(s) | 747, 1029, 1534 |
| BseBI | CCWGG | 2 cut(s) | 1679, 1731 |
| BseCI | ATCGAT | 1 cut(s) | 322 |
| BseDI | CCNNGG | 2 cut(s) | 1500, 1729 |
| BseGI | GGATG | 5 cut(s) | 535, 1204, 1295, 1354, 1674 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 137, 573, 1710 |
| BseMI | GCAATG | 3 cut(s) | 747, 1029, 1534 |
| BseMII | CTCAG | 8 cut(s) | 38, 429, 586, 681, 1458, 1577, 1647, 1917 |
| BseNI | ACTGG | 1 cut(s) | 1513 |
| BseRI | GAGGAG | 2 cut(s) | 579, 1352 |
| BseSI | GKGCMC | 1 cut(s) | 1789 |
| BseXI | GCAGC | 7 cut(s) | 556, 559, 566, 662, 880, 1207, 1643 |
| BseYI | CCCAGC | 1 cut(s) | 757 |
| BsgI | GTGCAG | 1 cut(s) | 669 |
| Bsh1236I | CGCG | 1 cut(s) | 1739 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1781 |
| BshFI | GGCC | 4 cut(s) | 1145, 1244, 1461, 1760 |
| BshVI | ATCGAT | 1 cut(s) | 322 |
| BsiEI | CGRYCG | 1 cut(s) | 1781 |
| BslFI | GGGAC | 2 cut(s) | 591, 774 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 137, 573, 1710 |
| BsmAI | GTCTC | 6 cut(s) | 289, 388, 1177, 1286, 1334, 1820 |
| BsmBI | CGTCTC | 2 cut(s) | 289, 1334 |
| BsmFI | GGGAC | 2 cut(s) | 591, 774 |
| BsnI | GGCC | 4 cut(s) | 1145, 1244, 1461, 1760 |
| Bso31I | GGTCTC | 1 cut(s) | 1177 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1789 |
| Bsp1407I | TGTACA | 1 cut(s) | 202 |
| Bsp143I | GATC | 8 cut(s) | 319, 323, 611, 1054, 1156, 1252, 1381, 1899 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 753 |
| BspACI | CCGC | 2 cut(s) | 1187, 1245 |
| BspANI | GGCC | 4 cut(s) | 1145, 1244, 1461, 1760 |
| BspCNI | CTCAG | 8 cut(s) | 37, 430, 585, 682, 1459, 1578, 1648, 1916 |
| BspDI | ATCGAT | 1 cut(s) | 322 |
| BspFNI | CGCG | 1 cut(s) | 1739 |
| BspHI | TCATGA | 1 cut(s) | 1384 |
| BspLI | GGNNCC | 2 cut(s) | 369, 922 |
| BspMAI | CTGCAG | 2 cut(s) | 157, 898 |
| BspMI | ACCTGC | 1 cut(s) | 146 |
| BspPI | GGATC | 3 cut(s) | 327, 619, 1164 |
| BspTNI | GGTCTC | 1 cut(s) | 1177 |
| BsrBI | CCGCTC | 1 cut(s) | 1247 |
| BsrDI | GCAATG | 3 cut(s) | 747, 1029, 1534 |
| BsrGI | TGTACA | 1 cut(s) | 202 |
| BsrI | ACTGG | 1 cut(s) | 1513 |
| BssECI | CCNNGG | 2 cut(s) | 1500, 1729 |
| BssMI | GATC | 8 cut(s) | 319, 323, 611, 1054, 1156, 1252, 1381, 1899 |
| BssNI | GRCGYC | 1 cut(s) | 298 |
| BssSI | CACGAG | 2 cut(s) | 399, 1112 |
| Bst2BI | CACGAG | 2 cut(s) | 399, 1112 |
| Bst2UI | CCWGG | 2 cut(s) | 1679, 1731 |
| Bst4CI | ACNGT | 5 cut(s) | 474, 736, 1366, 1457, 1799 |
| Bst6I | CTCTTC | 3 cut(s) | 233, 458, 597 |
| BstACI | GRCGYC | 1 cut(s) | 298 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1201 |
| BstAUI | TGTACA | 1 cut(s) | 202 |
| BstC8I | GCNNGC | 4 cut(s) | 552, 630, 966, 1077 |
| BstF5I | GGATG | 5 cut(s) | 535, 1204, 1295, 1354, 1674 |
| BstFNI | CGCG | 1 cut(s) | 1739 |
| BstH2I | RGCGCY | 2 cut(s) | 777, 996 |
| BstHHI | GCGC | 2 cut(s) | 776, 995 |
| BstKTI | GATC | 8 cut(s) | 322, 326, 614, 1057, 1159, 1255, 1384, 1902 |
| BstMAI | GTCTC | 6 cut(s) | 289, 388, 1177, 1286, 1334, 1820 |
| BstMBI | GATC | 8 cut(s) | 319, 323, 611, 1054, 1156, 1252, 1381, 1899 |
| BstMCI | CGRYCG | 1 cut(s) | 1781 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 763, 970, 1195, 1201, 1603 |
| BstNI | CCWGG | 2 cut(s) | 1679, 1731 |
| BstNSI | RCATGY | 6 cut(s) | 125, 392, 584, 632, 1037, 1083 |
| BstSCI | CCNGG | 2 cut(s) | 1677, 1729 |
| BstSFI | CTRYAG | 3 cut(s) | 153, 894, 1626 |
| BstSLI | GKGCMC | 1 cut(s) | 1789 |
| BstUI | CGCG | 1 cut(s) | 1739 |
| BstV1I | GCAGC | 7 cut(s) | 556, 559, 566, 662, 880, 1207, 1643 |
| BstV2I | GAAGAC | 1 cut(s) | 1441 |
| BstX2I | RGATCY | 3 cut(s) | 611, 1156, 1899 |
| BstYI | RGATCY | 3 cut(s) | 611, 1156, 1899 |
| Bsu15I | ATCGAT | 1 cut(s) | 322 |
| Bsu36I | CCTNAGG | 1 cut(s) | 572 |
| BsuRI | GGCC | 4 cut(s) | 1145, 1244, 1461, 1760 |
| BsuTUI | ATCGAT | 1 cut(s) | 322 |
| BtsCI | GGATG | 5 cut(s) | 535, 1204, 1295, 1354, 1674 |
| BtsIMutI | CAGTG | 2 cut(s) | 1462, 1795 |
| BveI | ACCTGC | 1 cut(s) | 146 |
| Cac8I | GCNNGC | 4 cut(s) | 552, 630, 966, 1077 |
| CaiI | CAGNNNCTG | 4 cut(s) | 550, 913, 1201, 1370 |
| CciI | TCATGA | 1 cut(s) | 1384 |
| CfoI | GCGC | 2 cut(s) | 776, 995 |
| Cfr13I | GGNCC | 1 cut(s) | 1701 |
| ClaI | ATCGAT | 1 cut(s) | 322 |
| CseI | GACGC | 3 cut(s) | 185, 306, 1728 |
| Csp6I | GTAC | 5 cut(s) | 174, 203, 404, 1609, 1890 |
| CviQI | GTAC | 5 cut(s) | 174, 203, 404, 1609, 1890 |
| DpnI | GATC | 8 cut(s) | 321, 325, 613, 1056, 1158, 1254, 1383, 1901 |
| DpnII | GATC | 8 cut(s) | 319, 323, 611, 1054, 1156, 1252, 1381, 1899 |
| EaeI | YGGCCR | 1 cut(s) | 1242 |
| Eam1104I | CTCTTC | 3 cut(s) | 233, 458, 597 |
| EarI | CTCTTC | 3 cut(s) | 233, 458, 597 |
| Eco147I | AGGCCT | 1 cut(s) | 1760 |
| Eco31I | GGTCTC | 1 cut(s) | 1177 |
| Eco47I | GGWCC | 1 cut(s) | 1701 |
| Eco47III | AGCGCT | 1 cut(s) | 994 |
| Eco57I | CTGAAG | 7 cut(s) | 360, 392, 680, 890, 1851, 1853, 1916 |
| Eco81I | CCTNAGG | 1 cut(s) | 572 |
| EcoRI | GAATTC | 1 cut(s) | 1505 |
| EcoRII | CCWGG | 2 cut(s) | 1677, 1729 |
| EcoT22I | ATGCAT | 1 cut(s) | 634 |
| Esp3I | CGTCTC | 2 cut(s) | 289, 1334 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 654, 686, 1410, 1442, 1745, 1777 |
| FaqI | GGGAC | 2 cut(s) | 591, 774 |
| FbaI | TGATCA | 2 cut(s) | 1054, 1381 |
| FblI | GTMKAC | 1 cut(s) | 831 |
| Fnu4HI | GCNGC | 8 cut(s) | 545, 548, 555, 651, 894, 1196, 1245, 1632 |
| FokI | GGATG | 5 cut(s) | 542, 1191, 1282, 1361, 1661 |
| Fsp4HI | GCNGC | 8 cut(s) | 545, 548, 555, 651, 894, 1196, 1245, 1632 |
| FspBI | CTAG | 3 cut(s) | 98, 228, 960 |
| GlaI | GCGC | 2 cut(s) | 775, 994 |
| GluI | GCNGC | 8 cut(s) | 545, 548, 555, 651, 894, 1196, 1245, 1632 |
| GsaI | CCCAGC | 1 cut(s) | 761 |
| GsuI | CTGGAG | 3 cut(s) | 126, 449, 1496 |
| HaeII | RGCGCY | 2 cut(s) | 777, 996 |
| HaeIII | GGCC | 4 cut(s) | 1145, 1244, 1461, 1760 |
| HgaI | GACGC | 3 cut(s) | 185, 306, 1728 |
| HhaI | GCGC | 2 cut(s) | 776, 995 |
| Hin1I | GRCGYC | 1 cut(s) | 298 |
| Hin6I | GCGC | 2 cut(s) | 774, 993 |
| HinP1I | GCGC | 2 cut(s) | 774, 993 |
| HincII | GTYRAC | 3 cut(s) | 781, 832, 1453 |
| HindII | GTYRAC | 3 cut(s) | 781, 832, 1453 |
| HinfI | GANTC | 4 cut(s) | 71, 1652, 1664, 1723 |
| HpaI | GTTAAC | 1 cut(s) | 781 |
| HphI | GGTGA | 3 cut(s) | 170, 1346, 1891 |
| Hpy166II | GTNNAC | 8 cut(s) | 143, 203, 404, 508, 742, 781, 832, 1453 |
| Hpy8I | GTNNAC | 8 cut(s) | 143, 203, 404, 508, 742, 781, 832, 1453 |
| Hpy99I | CGWCG | 1 cut(s) | 201 |
| HpyCH4III | ACNGT | 5 cut(s) | 474, 736, 1366, 1457, 1799 |
| HpyCH4IV | ACGT | 2 cut(s) | 1219, 1395 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 763, 970, 1195, 1201, 1603 |
| HpySE526I | ACGT | 2 cut(s) | 1219, 1395 |
| Hsp92I | GRCGYC | 1 cut(s) | 298 |
| HspAI | GCGC | 2 cut(s) | 774, 993 |
| Ksp22I | TGATCA | 2 cut(s) | 1054, 1381 |
| KspAI | GTTAAC | 1 cut(s) | 781 |
| Kzo9I | GATC | 8 cut(s) | 319, 323, 611, 1054, 1156, 1252, 1381, 1899 |
| LmnI | GCTCC | 7 cut(s) | 166, 193, 214, 533, 592, 625, 926 |
| Lsp1109I | GCAGC | 7 cut(s) | 556, 559, 566, 662, 880, 1207, 1643 |
| LweI | GCATC | 2 cut(s) | 545, 1213 |
| MaeI | CTAG | 3 cut(s) | 98, 228, 960 |
| MaeII | ACGT | 2 cut(s) | 1219, 1395 |
| MaeIII | GTNAC | 3 cut(s) | 1114, 1322, 1396 |
| MalI | GATC | 8 cut(s) | 321, 325, 613, 1056, 1158, 1254, 1383, 1901 |
| MbiI | CCGCTC | 1 cut(s) | 1247 |
| MboI | GATC | 8 cut(s) | 319, 323, 611, 1054, 1156, 1252, 1381, 1899 |
| MflI | RGATCY | 3 cut(s) | 611, 1156, 1899 |
| MhlI | GDGCHC | 1 cut(s) | 1789 |
| MmeI | TCCRAC | 3 cut(s) | 507, 829, 1679 |
| Mph1103I | ATGCAT | 1 cut(s) | 634 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1686, 1836 |
| MseI | TTAA | 5 cut(s) | 480, 780, 1038, 1226, 1752 |
| MslI | CAYNNNNRTG | 2 cut(s) | 948, 1403 |
| MspA1I | CMGCKG | 1 cut(s) | 550 |
| MspR9I | CCNGG | 2 cut(s) | 1679, 1731 |
| MvaI | CCWGG | 2 cut(s) | 1679, 1731 |
| MvnI | CGCG | 1 cut(s) | 1739 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 763, 970, 1195, 1201, 1603 |
| NdeII | GATC | 8 cut(s) | 319, 323, 611, 1054, 1156, 1252, 1381, 1899 |
| NlaIV | GGNNCC | 2 cut(s) | 369, 922 |
| NmeAIII | GCCGAG | 1 cut(s) | 1525 |
| NmuCI | GTSAC | 2 cut(s) | 1114, 1396 |
| NsiI | ATGCAT | 1 cut(s) | 634 |
| NspI | RCATGY | 6 cut(s) | 125, 392, 584, 632, 1037, 1083 |
| PaeI | GCATGC | 1 cut(s) | 632 |
| PagI | TCATGA | 1 cut(s) | 1384 |
| PaqCI | CACCTGC | 1 cut(s) | 146 |
| PceI | AGGCCT | 1 cut(s) | 1760 |
| PciI | ACATGT | 3 cut(s) | 121, 388, 580 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1686, 1836 |
| PfeI | GAWTC | 4 cut(s) | 71, 1652, 1664, 1723 |
| PfoI | TCCNGGA | 1 cut(s) | 1677 |
| PkrI | GCNGC | 8 cut(s) | 546, 549, 556, 652, 895, 1197, 1246, 1633 |
| PscI | ACATGT | 3 cut(s) | 121, 388, 580 |
| Psp6I | CCWGG | 2 cut(s) | 1677, 1729 |
| PspFI | CCCAGC | 1 cut(s) | 757 |
| PspGI | CCWGG | 2 cut(s) | 1677, 1729 |
| PspN4I | GGNNCC | 2 cut(s) | 369, 922 |
| PspPI | GGNCC | 1 cut(s) | 1701 |
| PstI | CTGCAG | 2 cut(s) | 157, 898 |
| PstNI | CAGNNNCTG | 4 cut(s) | 550, 913, 1201, 1370 |
| PsuI | RGATCY | 3 cut(s) | 611, 1156, 1899 |
| PvuII | CAGCTG | 1 cut(s) | 550 |
| RsaI | GTAC | 5 cut(s) | 175, 204, 405, 1610, 1891 |
| RsaNI | GTAC | 5 cut(s) | 174, 203, 404, 1609, 1890 |
| RseI | CAYNNNNRTG | 2 cut(s) | 948, 1403 |
| SalI | GTCGAC | 1 cut(s) | 830 |
| SaqAI | TTAA | 5 cut(s) | 480, 780, 1038, 1226, 1752 |
| SatI | GCNGC | 8 cut(s) | 545, 548, 555, 651, 894, 1196, 1245, 1632 |
| Sau3AI | GATC | 8 cut(s) | 319, 323, 611, 1054, 1156, 1252, 1381, 1899 |
| Sau96I | GGNCC | 1 cut(s) | 1701 |
| ScaI | AGTACT | 1 cut(s) | 175 |
| ScrFI | CCNGG | 2 cut(s) | 1679, 1731 |
| SduI | GDGCHC | 1 cut(s) | 1789 |
| SfaNI | GCATC | 2 cut(s) | 545, 1213 |
| SfcI | CTRYAG | 3 cut(s) | 153, 894, 1626 |
| SinI | GGWCC | 1 cut(s) | 1701 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 948, 1403 |
| SmlI | CTYRAG | 4 cut(s) | 260, 815, 1139, 1693 |
| SmoI | CTYRAG | 4 cut(s) | 260, 815, 1139, 1693 |
| SphI | GCATGC | 1 cut(s) | 632 |
| SseBI | AGGCCT | 1 cut(s) | 1760 |
| SsiI | CCGC | 2 cut(s) | 1187, 1245 |
| SspMI | CTAG | 3 cut(s) | 98, 228, 960 |
| StuI | AGGCCT | 1 cut(s) | 1760 |
| StyD4I | CCNGG | 2 cut(s) | 1677, 1729 |
| TaaI | ACNGT | 5 cut(s) | 474, 736, 1366, 1457, 1799 |
| TaiI | ACGT | 2 cut(s) | 1222, 1398 |
| TaqI | TCGA | 4 cut(s) | 69, 185, 322, 831 |
| TaqII | GACCGA | 1 cut(s) | 1767 |
| TatI | WGTACW | 3 cut(s) | 173, 202, 403 |
| TauI | GCSGC | 1 cut(s) | 1247 |
| TfiI | GAWTC | 4 cut(s) | 71, 1652, 1664, 1723 |
| Tru1I | TTAA | 5 cut(s) | 480, 780, 1038, 1226, 1752 |
| Tru9I | TTAA | 5 cut(s) | 480, 780, 1038, 1226, 1752 |
| TscAI | CASTG | 2 cut(s) | 1462, 1802 |
| TseFI | GTSAC | 2 cut(s) | 1114, 1396 |
| TseI | GCWGC | 7 cut(s) | 544, 547, 554, 650, 893, 1195, 1631 |
| Tsp45I | GTSAC | 2 cut(s) | 1114, 1396 |
| TspDTI | ATGAA | 7 cut(s) | 371, 384, 932, 1040, 1365, 1401, 1899 |
| TspGWI | ACGGA | 2 cut(s) | 473, 587 |
| TspRI | CASTG | 2 cut(s) | 1462, 1802 |
| VpaK11BI | GGWCC | 1 cut(s) | 1701 |
| XapI | RAATTY | 5 cut(s) | 65, 134, 1210, 1505, 1520 |
| XceI | RCATGY | 6 cut(s) | 125, 392, 584, 632, 1037, 1083 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1520 |
| XmiI | GTMKAC | 1 cut(s) | 831 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1686, 1836 |
| XspI | CTAG | 3 cut(s) | 98, 228, 960 |
| ZrmI | AGTACT | 1 cut(s) | 175 |
| Zsp2I | ATGCAT | 1 cut(s) | 634 |