Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0010320

Physical Location & Seq

Genomic Coordinates Forward (+)

12766698 .. 12771366

Gene Structure 4669 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1162200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGGCGGCCAAGAAGCAGGAGAAGAGCTCGCCGAAGAAGAGGAAGCAAATCCCAGGCAATAAGCCGGAGACCCACAGCTCCTCTTCCAAGAAGACCAAGCTCCTCGACTCCAAGCCCTCAAATCCGCGTAGCACCGACTTCAAGAAACCCTCCAAACCTTTCAAGCCCCGAGAACCAGGACTCGATCATGAGAAACAAGTTCCGCTGTCGAAGCGAGAGGGCCGCCTCCGGGCCAAGGAACTTGCGGAGGCTAGGAAGAAGAAGCGGAAGCGTCATTACAATTTAGAGCAAGAGCTTGCACATCTGTGGGAGAAGATGCGGCAACGAAATATATCCAAAGAAGATCGATCCAAGTTGGTGAGTGAAGCGTTAGAGAAAATGAAGGGGAAAATTCCTGAAATCGCAAGTTCCCATGTGTCTTCTCGTGTTCTGCAGACTTGCGTTAAGTACTGTTCACAAGCGGAAAAGGATGCGGTTTTTGAGGAGCTTCAGCCACATCTTCTAACTCTTGCATGCAACACATATGCTGTTCATCTGGTGACCAAAATGTTAGACAATGCCTCCAAAAAGCAGCTAGCGGCATTTATCTCCTCTCTCCGAGGACATGTTGCTTCCCTTCTTCGTCACATGGTTGGTTCTGTAGTCGTTGAGCACGCATACCAATTGGGAAATGCAACTCAAAAGCAAGAGCTTTTGGTGGAACTATATTCTACAGAGCTTCAGTTGTTTAAGGACTTGGTCTCGAAGAATGAGGGCAGGTTACTAGATATAATTTCAAAGCTAGATCTGCAGAAATCTTCAGTCTTCCGGCACATGACTTCAGTGATTCAACCAATTTTAGAGAAAGGAATAATTGATCACTCTATAGTACACAGGGTGTTGATAGAGTACTTCACAATAGCTGAGCAGTTCTCTGCCACAGATGTAATTAAACAGTTGTCGGGTCCACTTCTTGTTCGGGTGATCCACACAAGGGATGGATCCAAGGTTGGGATGCTCTGTGTCAAGCATGGCAGTTCAAAGGAAAGAAAGAAGATAATTAAAGGAATGAAAGGCCACGTTCATAAAATAGCTCTTGATCAAGGTGGAAGCATGGTGCTTGTTTGCCTTGTTTCAACTGTTGATGACACAAAGCTTACTACAAAGGTTGTCATTAATGAGCTTCAAGAAAACCTAAAGGATCTTGTTCTCGATAAGAATGGAAGGCGCCCATTACTGCAGCTACTTCATCCAAATTGTTCACGTTATTTGACTCCTGATGACCTGGCTTCCCTCAGTTTGTCTATCCCTTCACTTTCCAACAAGGTTGAACCAGACAATTCTGAAACAAAATCTTCAAAGGTTAACAAATCTGGTGAAGAGGCCAATAGTGATTTGGAATTGGATGAAGCCGATATGAATCATGATGATGGCCTCCACTCAGTTGAGGGAGGAAAAAAGGATCCTGCCGTTCGAAGGCAAGAGTTGTTAGTCCAGAGTGGGTTGGCCGAGAAGCTAGTTGATGTATGCATTACAAGTGCAGGGGAATTACTTAGATCAAATTTTGGCAAAGAAGTCATATATGAGGTTGCAACTGGGGGTGCTGGTGGCATTCTCCACCCAACTTTGGATGACAAGTTGAATGAACTATATGAAGCTATAGCATCTCTTGTCGCAGAACCTAAATCCCAAGAATCCGAAGAGGACTCAAAAGAGGAACACATCCTTGAAAATTTCCATTCCAGTCGGACCATTAGAAAACTAATCTTGGACTGCCCCACATTTGCTTCCACTTTGTGGAACAAGGCACTTAAAGGAAAGTGTGATTTGTGGGCCCAAGGTCACAGTGGGAAGGTGATTGCTGCATTCTTAGAATCTTCGGACTCTAAGGTCAATCAACTGGCAAATAAAGAGTTGAAGAAGTTGATAGATGGTGGCATTCTCAAAGTTCCTGAGCCAAAAGTAGTTACCGGAAAGAAAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006417 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0010154 GO:0010468 GO:0010556 GO:0010608 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0034248 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051246 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CPL zf-XS

Protein Analysis

655

Amino Acids

72.86

Weight (kDa)

9.19

Isoelectric Point (pI)

42.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUF_NOP9	PF22493	135 - 402	7.3e-13	NOP9-like PUF repeat domain
CPL	PF08144	477 - 582	1.8e-10	CPL (NUC119) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010320)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16810
fragaria_vesca	FvH4_4g18900 FvH4_4g18900
malus_domestica	MD13G1162200.v1.1 MD16G1162000.v1.1
prunus_persica	Prupe.1G129500_v2.0.a1
pyrus_communis	pycom13g13840 pycom16g13730 pycom16g13740
rosa_chinensis	RchiOBHm_Chr4g0423801
rosa_laevigata	RLG00000007532
rosa_multiflora	Rmu_co8056970.1_g000001 Rmu_sc0003369.1_g000020
rosa_roxburghii	Rroxscaffold_5G00365910
rosa_rugosa	Rorug04G0190800
rosa_samantha	Rh4AG250200 Rh4BG255400 Rh4CG064700 Rh4CG263400 Rh4DG249700
rosa_wichuraiana	Rw4G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1868
Acc36I	ACCTGC	1 cut(s)	747
AccB1I	GGYRCC	1 cut(s)	1206
AccB7I	CCANNNNNTGG	1 cut(s)	1776
AccII	CGCG	1 cut(s)	127
AclWI	GGATC	7 cut(s)	342, 958, 975, 988, 1188, 1436, 1449
AcoI	YGGCCR	2 cut(s)	6, 1485
AcsI	RAATTY	3 cut(s)	390, 1540, 1711
AcuI	CTGAAG	4 cut(s)	473, 704, 783, 804
AcyI	GRCGYC	1 cut(s)	1207
AdeI	CACNNNGTG	2 cut(s)	877, 1776
AfaI	GTAC	3 cut(s)	449, 870, 890
AfiI	CCNNNNNNNGG	7 cut(s)	229, 235, 973, 990, 1455, 1606, 1776
AflIII	ACRYGT	1 cut(s)	604
AjnI	CCWGG	3 cut(s)	52, 175, 1263
AleI	CACNNNNGTG	1 cut(s)	304
Alw21I	GWGCWC	2 cut(s)	29, 654
Alw26I	GTCTC	2 cut(s)	62, 745
AlwI	GGATC	7 cut(s)	342, 958, 975, 988, 1188, 1436, 1449
Ama87I	CYCGRG	1 cut(s)	168
AoxI	GGCC	8 cut(s)	6, 220, 231, 1054, 1362, 1411, 1485, 1812
ApaI	GGGCCC	1 cut(s)	1816
ApeKI	GCWGC	3 cut(s)	571, 1219, 1841
ApoI	RAATTY	3 cut(s)	390, 1540, 1711
AseI	ATTAAT	1 cut(s)	1155
AspLEI	GCGC	1 cut(s)	1209
AspS9I	GGNCC	6 cut(s)	220, 231, 944, 1728, 1812, 1813
AsuC2I	CCSGG	1 cut(s)	230
AsuHPI	GGTGA	5 cut(s)	370, 550, 973, 1367, 1846
AsuII	TTCGAA	1 cut(s)	1453
AsuNHI	GCTAGC	1 cut(s)	574
AvaI	CYCGRG	1 cut(s)	168
AvaII	GGWCC	2 cut(s)	944, 1728
BaeGI	GKGCMC	1 cut(s)	1816
BamHI	GGATCC	2 cut(s)	980, 1441
BanI	GGYRCC	1 cut(s)	1206
BanII	GRGCYC	2 cut(s)	29, 1816
BarI	GAAGNNNNNNTAC	2 cut(s)	260, 292
BauI	CACGAG	1 cut(s)	423
BbsI	GAAGAC	3 cut(s)	98, 411, 796
Bbv12I	GWGCWC	2 cut(s)	29, 654
BbvI	GCAGC	3 cut(s)	583, 1231, 1828
BccI	CCATC	3 cut(s)	971, 1403, 1904
BceAI	ACGGC	1 cut(s)	1433
BciT130I	CCWGG	3 cut(s)	54, 177, 1265
BclI	TGATCA	2 cut(s)	856, 1078
BcnI	CCSGG	1 cut(s)	230
BcoDI	GTCTC	2 cut(s)	62, 745
BfaI	CTAG	5 cut(s)	252, 575, 764, 782, 1496
BfmI	CTRYAG	7 cut(s)	431, 639, 711, 788, 864, 1217, 1638
BfoI	RGCGCY	1 cut(s)	1210
BfuAI	ACCTGC	1 cut(s)	747
BglII	AGATCT	1 cut(s)	784
BisI	GCNGC	7 cut(s)	6, 223, 320, 572, 579, 1220, 1842
BlpI	GCTNAGC	1 cut(s)	903
BlsI	GCNGC	7 cut(s)	7, 224, 321, 573, 580, 1221, 1843
BmcAI	AGTACT	2 cut(s)	449, 890
Bme1390I	CCNGG	4 cut(s)	54, 177, 230, 1265
Bme18I	GGWCC	2 cut(s)	944, 1728
BmeT110I	CYCGRG	1 cut(s)	168
BmgT120I	GGNCC	6 cut(s)	220, 231, 944, 1728, 1812, 1813
BmiI	GGNNCC	5 cut(s)	945, 982, 1208, 1443, 1814
BmrFI	CCNGG	4 cut(s)	54, 177, 230, 1265
BmrI	ACTGGG	1 cut(s)	1584
BmsI	GCATC	4 cut(s)	306, 460, 984, 1652
BmtI	GCTAGC	1 cut(s)	578
BmuI	ACTGGG	1 cut(s)	1584
BpiI	GAAGAC	3 cut(s)	98, 411, 796
BplI	GAGNNNNNCTC	4 cut(s)	11, 43, 896, 928
Bpu10I	CCTNAGC	1 cut(s)	1932
Bpu1102I	GCTNAGC	1 cut(s)	903
Bpu14I	TTCGAA	1 cut(s)	1453
BpuMI	CCSGG	1 cut(s)	230
Bsa29I	ATCGAT	1 cut(s)	346
BsaBI	GATNNNNATC	1 cut(s)	1398
BsaHI	GRCGYC	1 cut(s)	1207
BsaI	GGTCTC	2 cut(s)	62, 745
BsaJI	CCNNGG	5 cut(s)	52, 234, 598, 984, 1816
BsaWI	WCCGGW	1 cut(s)	1949
BsaXI	ACNNNNNCTCC	2 cut(s)	545, 575
Bsc4I	CCNNNNNNNGG	7 cut(s)	229, 235, 973, 990, 1455, 1606, 1776
Bse1I	ACTGG	3 cut(s)	1579, 1722, 1884
Bse8I	GATNNNNATC	1 cut(s)	1398
BseBI	CCWGG	3 cut(s)	54, 177, 1265
BseCI	ATCGAT	1 cut(s)	346
BseDI	CCNNGG	5 cut(s)	52, 234, 598, 984, 1816
BseGI	GGATG	7 cut(s)	475, 982, 999, 1228, 1390, 1615, 1701
BseJI	GATNNNNATC	1 cut(s)	1398
BseLI	CCNNNNNNNGG	7 cut(s)	229, 235, 973, 990, 1455, 1606, 1776
BseMII	CTCAG	4 cut(s)	894, 1288, 1434, 1923
BseNI	ACTGG	3 cut(s)	1579, 1722, 1884
BseRI	GAGGAG	4 cut(s)	70, 92, 497, 580
BseSI	GKGCMC	1 cut(s)	1816
BseXI	GCAGC	3 cut(s)	583, 1231, 1828
BsgI	GTGCAG	1 cut(s)	1539
Bsh1236I	CGCG	1 cut(s)	127
BshFI	GGCC	8 cut(s)	8, 222, 233, 1056, 1364, 1413, 1487, 1814
BshNI	GGYRCC	1 cut(s)	1206
BshVI	ATCGAT	1 cut(s)	346
BsiHKAI	GWGCWC	2 cut(s)	29, 654
BsiHKCI	CYCGRG	1 cut(s)	168
BsiSI	CCGG	4 cut(s)	65, 229, 808, 1950
BslI	CCNNNNNNNGG	7 cut(s)	229, 235, 973, 990, 1455, 1606, 1776
BsmAI	GTCTC	2 cut(s)	62, 745
BsmI	GAATGC	3 cut(s)	1590, 1844, 1917
BsnI	GGCC	8 cut(s)	8, 222, 233, 1056, 1364, 1413, 1487, 1814
Bso31I	GGTCTC	2 cut(s)	62, 745
BsoBI	CYCGRG	1 cut(s)	168
Bsp119I	TTCGAA	1 cut(s)	1453
Bsp120I	GGGCCC	1 cut(s)	1812
Bsp1286I	GDGCHC	3 cut(s)	29, 654, 1816
Bsp1720I	GCTNAGC	1 cut(s)	903
BspANI	GGCC	8 cut(s)	8, 222, 233, 1056, 1364, 1413, 1487, 1814
BspCNI	CTCAG	4 cut(s)	895, 1287, 1433, 1924
BspDI	ATCGAT	1 cut(s)	346
BspFNI	CGCG	1 cut(s)	127
BspHI	TCATGA	2 cut(s)	187, 1402
BspLI	GGNNCC	5 cut(s)	945, 982, 1208, 1443, 1814
BspMAI	CTGCAG	3 cut(s)	435, 792, 1221
BspMI	ACCTGC	1 cut(s)	747
BspOI	GCTAGC	1 cut(s)	578
BspPI	GGATC	7 cut(s)	342, 958, 975, 988, 1188, 1436, 1449
BspQI	GCTCTTC	1 cut(s)	17
BspT104I	TTCGAA	1 cut(s)	1453
BspT107I	GGYRCC	1 cut(s)	1206
BspTNI	GGTCTC	2 cut(s)	62, 745
BsrI	ACTGG	3 cut(s)	1579, 1722, 1884
BssECI	CCNNGG	5 cut(s)	52, 234, 598, 984, 1816
BssNI	GRCGYC	1 cut(s)	1207
BssSI	CACGAG	1 cut(s)	423
BssT1I	CCWWGG	3 cut(s)	234, 984, 1816
Bst2BI	CACGAG	1 cut(s)	423
Bst2UI	CCWGG	3 cut(s)	54, 177, 1265
Bst4CI	ACNGT	4 cut(s)	452, 936, 1120, 1826
Bst6I	CTCTTC	5 cut(s)	17, 32, 88, 1353, 1674
BstACI	GRCGYC	1 cut(s)	1207
BstBI	TTCGAA	1 cut(s)	1453
BstC8I	GCNNGC	5 cut(s)	29, 297, 514, 576, 654
BstDEI	CTNAG	7 cut(s)	903, 1274, 1420, 1532, 1849, 1866, 1932
BstEII	GGTNACC	1 cut(s)	538
BstF5I	GGATG	7 cut(s)	475, 982, 999, 1228, 1390, 1615, 1701
BstFNI	CGCG	1 cut(s)	127
BstH2I	RGCGCY	1 cut(s)	1210
BstHHI	GCGC	1 cut(s)	1209
BstMAI	GTCTC	2 cut(s)	62, 745
BstMWI	GCNNNNNNNGC	2 cut(s)	211, 787
BstNI	CCWGG	3 cut(s)	54, 177, 1265
BstNSI	RCATGY	2 cut(s)	516, 608
BstPI	GGTNACC	1 cut(s)	538
BstSCI	CCNGG	4 cut(s)	52, 175, 228, 1263
BstSFI	CTRYAG	7 cut(s)	431, 639, 711, 788, 864, 1217, 1638
BstSLI	GKGCMC	1 cut(s)	1816
BstUI	CGCG	1 cut(s)	127
BstV1I	GCAGC	3 cut(s)	583, 1231, 1828
BstV2I	GAAGAC	3 cut(s)	98, 411, 796
BstX2I	RGATCY	4 cut(s)	784, 980, 1180, 1441
BstYI	RGATCY	4 cut(s)	784, 980, 1180, 1441
Bsu15I	ATCGAT	1 cut(s)	346
BsuRI	GGCC	8 cut(s)	8, 222, 233, 1056, 1364, 1413, 1487, 1814
BsuTUI	ATCGAT	1 cut(s)	346
BtsCI	GGATG	7 cut(s)	475, 982, 999, 1228, 1390, 1615, 1701
BtsIMutI	CAGTG	2 cut(s)	828, 1831
BveI	ACCTGC	1 cut(s)	747
Cac8I	GCNNGC	5 cut(s)	29, 297, 514, 576, 654
CciI	TCATGA	2 cut(s)	187, 1402
CfoI	GCGC	1 cut(s)	1209
Cfr13I	GGNCC	6 cut(s)	220, 231, 944, 1728, 1812, 1813
ClaI	ATCGAT	1 cut(s)	346
CseI	GACGC	1 cut(s)	260
Csp6I	GTAC	3 cut(s)	448, 869, 889
CviAII	CATG	9 cut(s)	188, 413, 513, 605, 628, 814, 1010, 1093, 1403
CviQI	GTAC	3 cut(s)	448, 869, 889
DdeI	CTNAG	7 cut(s)	903, 1274, 1420, 1532, 1849, 1866, 1932
DinI	GGCGCC	1 cut(s)	1208
DraIII	CACNNNGTG	2 cut(s)	877, 1776
DrdI	GACNNNNNNGTC	1 cut(s)	1868
DseDI	GACNNNNNNGTC	1 cut(s)	1868
EaeI	YGGCCR	2 cut(s)	6, 1485
Eam1104I	CTCTTC	5 cut(s)	17, 32, 88, 1353, 1674
EarI	CTCTTC	5 cut(s)	17, 32, 88, 1353, 1674
Ecl136II	GAGCTC	1 cut(s)	27
Eco130I	CCWWGG	3 cut(s)	234, 984, 1816
Eco24I	GRGCYC	2 cut(s)	29, 1816
Eco31I	GGTCTC	2 cut(s)	62, 745
Eco47I	GGWCC	2 cut(s)	944, 1728
Eco53kI	GAGCTC	1 cut(s)	27
Eco57I	CTGAAG	4 cut(s)	473, 704, 783, 804
Eco88I	CYCGRG	1 cut(s)	168
Eco91I	GGTNACC	1 cut(s)	538
EcoICRI	GAGCTC	1 cut(s)	27
EcoO65I	GGTNACC	1 cut(s)	538
EcoRII	CCWGG	3 cut(s)	52, 175, 1263
EcoT14I	CCWWGG	3 cut(s)	234, 984, 1816
EcoT22I	ATGCAT	1 cut(s)	1511
EcoT38I	GRGCYC	2 cut(s)	29, 1816
EgeI	GGCGCC	1 cut(s)	1208
EheI	GGCGCC	1 cut(s)	1208
ErhI	CCWWGG	3 cut(s)	234, 984, 1816
FaeI	CATG	9 cut(s)	191, 416, 516, 608, 631, 817, 1013, 1096, 1406
FatI	CATG	9 cut(s)	187, 412, 512, 604, 627, 813, 1009, 1092, 1402
FauNDI	CATATG	1 cut(s)	523
FbaI	TGATCA	2 cut(s)	856, 1078
Fnu4HI	GCNGC	7 cut(s)	6, 223, 320, 572, 579, 1220, 1842
FokI	GGATG	7 cut(s)	482, 989, 1006, 1215, 1397, 1622, 1688
FriOI	GRGCYC	2 cut(s)	29, 1816
Fsp4HI	GCNGC	7 cut(s)	6, 223, 320, 572, 579, 1220, 1842
FspBI	CTAG	5 cut(s)	252, 575, 764, 782, 1496
GlaI	GCGC	1 cut(s)	1208
GluI	GCNGC	7 cut(s)	6, 223, 320, 572, 579, 1220, 1842
HaeII	RGCGCY	1 cut(s)	1210
HaeIII	GGCC	8 cut(s)	8, 222, 233, 1056, 1364, 1413, 1487, 1814
HapII	CCGG	4 cut(s)	65, 229, 808, 1950
HgaI	GACGC	1 cut(s)	260
HhaI	GCGC	1 cut(s)	1209
Hin1I	GRCGYC	1 cut(s)	1207
Hin1II	CATG	9 cut(s)	191, 416, 516, 608, 631, 817, 1013, 1096, 1406
Hin6I	GCGC	1 cut(s)	1207
HinP1I	GCGC	1 cut(s)	1207
HincII	GTYRAC	1 cut(s)	1345
HindII	GTYRAC	1 cut(s)	1345
HindIII	AAGCTT	1 cut(s)	1133
HinfI	GANTC	9 cut(s)	107, 180, 826, 1252, 1399, 1673, 1685, 1853, 1862
HpaI	GTTAAC	1 cut(s)	1345
HpaII	CCGG	4 cut(s)	65, 229, 808, 1950
HphI	GGTGA	5 cut(s)	370, 550, 973, 1367, 1846
Hpy166II	GTNNAC	5 cut(s)	455, 871, 947, 1241, 1345
Hpy188I	TCNGA	5 cut(s)	599, 1324, 1678, 1728, 1861
Hpy8I	GTNNAC	5 cut(s)	455, 871, 947, 1241, 1345
HpyAV	CCTTC	6 cut(s)	376, 626, 1197, 1299, 1449, 1825
HpyCH4III	ACNGT	4 cut(s)	452, 936, 1120, 1826
HpyCH4IV	ACGT	2 cut(s)	1059, 1243
HpyF10VI	GCNNNNNNNGC	2 cut(s)	211, 787
HpyF3I	CTNAG	7 cut(s)	903, 1274, 1420, 1532, 1849, 1866, 1932
HpySE526I	ACGT	2 cut(s)	1059, 1243
Hsp92I	GRCGYC	1 cut(s)	1207
Hsp92II	CATG	9 cut(s)	191, 416, 516, 608, 631, 817, 1013, 1096, 1406
HspAI	GCGC	1 cut(s)	1207
KasI	GGCGCC	1 cut(s)	1206
Ksp22I	TGATCA	2 cut(s)	856, 1078
KspAI	GTTAAC	1 cut(s)	1345
LguI	GCTCTTC	1 cut(s)	17
LmnI	GCTCC	3 cut(s)	83, 105, 484
Lsp1109I	GCAGC	3 cut(s)	583, 1231, 1828
LweI	GCATC	4 cut(s)	306, 460, 984, 1652
MaeI	CTAG	5 cut(s)	252, 575, 764, 782, 1496
MaeII	ACGT	2 cut(s)	1059, 1243
MaeIII	GTNAC	5 cut(s)	538, 623, 759, 1820, 1945
MfeI	CAATTG	1 cut(s)	662
MflI	RGATCY	4 cut(s)	784, 980, 1180, 1441
MhlI	GDGCHC	3 cut(s)	29, 654, 1816
Mly113I	GGCGCC	1 cut(s)	1207
MlyI	GAGTC	5 cut(s)	101, 174, 1246, 1679, 1856
MmeI	TCCRAC	2 cut(s)	1323, 1706
Mph1103I	ATGCAT	1 cut(s)	1511
MseI	TTAA	7 cut(s)	444, 729, 930, 1041, 1155, 1344, 1791
MslI	CAYNNNNRTG	2 cut(s)	304, 1407
MspA1I	CMGCKG	1 cut(s)	205
MspI	CCGG	4 cut(s)	65, 229, 808, 1950
MspR9I	CCNGG	4 cut(s)	54, 177, 230, 1265
MunI	CAATTG	1 cut(s)	662
Mva1269I	GAATGC	3 cut(s)	1590, 1844, 1917
MvaI	CCWGG	3 cut(s)	54, 177, 1265
MvnI	CGCG	1 cut(s)	127
MwoI	GCNNNNNNNGC	2 cut(s)	211, 787
NarI	GGCGCC	1 cut(s)	1207
NciI	CCSGG	1 cut(s)	230
NdeI	CATATG	1 cut(s)	523
NheI	GCTAGC	1 cut(s)	574
NlaIII	CATG	9 cut(s)	191, 416, 516, 608, 631, 817, 1013, 1096, 1406
NlaIV	GGNNCC	5 cut(s)	945, 982, 1208, 1443, 1814
NmeAIII	GCCGAG	1 cut(s)	1513
NmuCI	GTSAC	3 cut(s)	538, 623, 1820
NsiI	ATGCAT	1 cut(s)	1511
NspI	RCATGY	2 cut(s)	516, 608
NspV	TTCGAA	1 cut(s)	1453
OliI	CACNNNNGTG	1 cut(s)	304
PaeI	GCATGC	1 cut(s)	516
PagI	TCATGA	2 cut(s)	187, 1402
PciI	ACATGT	1 cut(s)	604
PciSI	GCTCTTC	1 cut(s)	17
PctI	GAATGC	3 cut(s)	1590, 1844, 1917
PfeI	GAWTC	4 cut(s)	826, 1399, 1673, 1853
PflFI	GACNNNGTC	1 cut(s)	737
PflMI	CCANNNNNTGG	1 cut(s)	1776
PkrI	GCNGC	7 cut(s)	7, 224, 321, 573, 580, 1221, 1843
PleI	GAGTC	5 cut(s)	101, 174, 1246, 1679, 1856
PluTI	GGCGCC	1 cut(s)	1210
PpsI	GAGTC	5 cut(s)	101, 174, 1246, 1679, 1856
PscI	ACATGT	1 cut(s)	604
PshBI	ATTAAT	1 cut(s)	1155
Psp124BI	GAGCTC	1 cut(s)	29
Psp6I	CCWGG	3 cut(s)	52, 175, 1263
PspEI	GGTNACC	1 cut(s)	538
PspGI	CCWGG	3 cut(s)	52, 175, 1263
PspN4I	GGNNCC	5 cut(s)	945, 982, 1208, 1443, 1814
PspOMI	GGGCCC	1 cut(s)	1812
PspPI	GGNCC	6 cut(s)	220, 231, 944, 1728, 1812, 1813
PstI	CTGCAG	3 cut(s)	435, 792, 1221
PsuI	RGATCY	4 cut(s)	784, 980, 1180, 1441
PsyI	GACNNNGTC	1 cut(s)	737
RsaI	GTAC	3 cut(s)	449, 870, 890
RsaNI	GTAC	3 cut(s)	448, 869, 889
RseI	CAYNNNNRTG	2 cut(s)	304, 1407
SacI	GAGCTC	1 cut(s)	29
SapI	GCTCTTC	1 cut(s)	17
SaqAI	TTAA	7 cut(s)	444, 729, 930, 1041, 1155, 1344, 1791
SatI	GCNGC	7 cut(s)	6, 223, 320, 572, 579, 1220, 1842
Sau96I	GGNCC	6 cut(s)	220, 231, 944, 1728, 1812, 1813
ScaI	AGTACT	2 cut(s)	449, 890
SchI	GAGTC	5 cut(s)	101, 174, 1246, 1679, 1856
ScrFI	CCNGG	4 cut(s)	54, 177, 230, 1265
SduI	GDGCHC	3 cut(s)	29, 654, 1816
SfaNI	GCATC	4 cut(s)	306, 460, 984, 1652
SfcI	CTRYAG	7 cut(s)	431, 639, 711, 788, 864, 1217, 1638
SfoI	GGCGCC	1 cut(s)	1208
SfuI	TTCGAA	1 cut(s)	1453
SinI	GGWCC	2 cut(s)	944, 1728
SmiMI	CAYNNNNRTG	2 cut(s)	304, 1407
SphI	GCATGC	1 cut(s)	516
SspDI	GGCGCC	1 cut(s)	1206
SspMI	CTAG	5 cut(s)	252, 575, 764, 782, 1496
SstI	GAGCTC	1 cut(s)	29
StyD4I	CCNGG	4 cut(s)	52, 175, 228, 1263
StyI	CCWWGG	3 cut(s)	234, 984, 1816
TaaI	ACNGT	4 cut(s)	452, 936, 1120, 1826
TaiI	ACGT	2 cut(s)	1062, 1246
TaqI	TCGA	7 cut(s)	105, 183, 209, 346, 743, 1191, 1453
TatI	WGTACW	3 cut(s)	447, 868, 888
TauI	GCSGC	4 cut(s)	8, 225, 322, 581
TfiI	GAWTC	4 cut(s)	826, 1399, 1673, 1853
Tru1I	TTAA	7 cut(s)	444, 729, 930, 1041, 1155, 1344, 1791
Tru9I	TTAA	7 cut(s)	444, 729, 930, 1041, 1155, 1344, 1791
TscAI	CASTG	2 cut(s)	828, 1831
TseFI	GTSAC	3 cut(s)	538, 623, 1820
TseI	GCWGC	3 cut(s)	571, 1219, 1841
Tsp45I	GTSAC	3 cut(s)	538, 623, 1820
TspDTI	ATGAA	9 cut(s)	395, 521, 1052, 1064, 1217, 1401, 1412, 1638, 1647
TspRI	CASTG	2 cut(s)	828, 1831
Tth111I	GACNNNGTC	1 cut(s)	737
Van91I	CCANNNNNTGG	1 cut(s)	1776
VpaK11BI	GGWCC	2 cut(s)	944, 1728
VspI	ATTAAT	1 cut(s)	1155
XapI	RAATTY	3 cut(s)	390, 1540, 1711
XceI	RCATGY	2 cut(s)	516, 608
XcmI	CCANNNNNNNNNTGG	3 cut(s)	974, 1372, 1823
XspI	CTAG	5 cut(s)	252, 575, 764, 782, 1496
ZrmI	AGTACT	2 cut(s)	449, 890
Zsp2I	ATGCAT	1 cut(s)	1511

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.